B3 domain-containing
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 79 - 157 | 1.9e-08 | B3 DNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 508 |
| AcsI | RAATTY | 3 cut(s) | 59, 71, 203 |
| AfaI | GTAC | 3 cut(s) | 131, 156, 462 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 308 |
| AgsI | TTSAA | 4 cut(s) | 202, 208, 296, 559 |
| AjiI | CACGTC | 1 cut(s) | 17 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 402, 434 |
| AluBI | AGCT | 5 cut(s) | 26, 81, 251, 344, 432 |
| AluI | AGCT | 5 cut(s) | 26, 81, 251, 344, 432 |
| Alw26I | GTCTC | 1 cut(s) | 239 |
| ApeKI | GCWGC | 1 cut(s) | 414 |
| ApoI | RAATTY | 3 cut(s) | 59, 71, 203 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 217 |
| BbvI | GCAGC | 1 cut(s) | 401 |
| BccI | CCATC | 2 cut(s) | 113, 369 |
| BclI | TGATCA | 1 cut(s) | 280 |
| BcoDI | GTCTC | 1 cut(s) | 239 |
| BfaI | CTAG | 2 cut(s) | 36, 404 |
| BisI | GCNGC | 1 cut(s) | 415 |
| BlsI | GCNGC | 1 cut(s) | 416 |
| BmgBI | CACGTC | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 3 cut(s) | 158, 317, 409 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 308 |
| Bse1I | ACTGG | 1 cut(s) | 422 |
| Bse3DI | GCAATG | 1 cut(s) | 145 |
| BseDI | CCNNGG | 3 cut(s) | 158, 317, 409 |
| BseGI | GGATG | 1 cut(s) | 380 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BseMI | GCAATG | 1 cut(s) | 145 |
| BseMII | CTCAG | 2 cut(s) | 127, 346 |
| BseNI | ACTGG | 1 cut(s) | 422 |
| BseXI | GCAGC | 1 cut(s) | 401 |
| BslFI | GGGAC | 1 cut(s) | 433 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BsmAI | GTCTC | 1 cut(s) | 239 |
| BsmFI | GGGAC | 1 cut(s) | 433 |
| Bsp1407I | TGTACA | 1 cut(s) | 129 |
| Bsp143I | GATC | 1 cut(s) | 280 |
| Bsp19I | CCATGG | 1 cut(s) | 317 |
| BspCNI | CTCAG | 2 cut(s) | 126, 345 |
| BsrDI | GCAATG | 1 cut(s) | 145 |
| BsrGI | TGTACA | 1 cut(s) | 129 |
| BsrI | ACTGG | 1 cut(s) | 422 |
| BssECI | CCNNGG | 3 cut(s) | 158, 317, 409 |
| BssMI | GATC | 1 cut(s) | 280 |
| BssT1I | CCWWGG | 3 cut(s) | 158, 317, 409 |
| Bst4CI | ACNGT | 2 cut(s) | 308, 447 |
| BstAUI | TGTACA | 1 cut(s) | 129 |
| BstDEI | CTNAG | 2 cut(s) | 113, 332 |
| BstDSI | CCRYGG | 1 cut(s) | 317 |
| BstF5I | GGATG | 1 cut(s) | 380 |
| BstKTI | GATC | 1 cut(s) | 283 |
| BstMAI | GTCTC | 1 cut(s) | 239 |
| BstMBI | GATC | 1 cut(s) | 280 |
| BstV1I | GCAGC | 1 cut(s) | 401 |
| BtgI | CCRYGG | 1 cut(s) | 317 |
| BtrI | CACGTC | 1 cut(s) | 17 |
| BtsCI | GGATG | 1 cut(s) | 380 |
| BtsIMutI | CAGTG | 1 cut(s) | 429 |
| Csp6I | GTAC | 3 cut(s) | 130, 155, 461 |
| CviAII | CATG | 2 cut(s) | 318, 484 |
| CviQI | GTAC | 3 cut(s) | 130, 155, 461 |
| DdeI | CTNAG | 2 cut(s) | 113, 332 |
| DpnI | GATC | 1 cut(s) | 282 |
| DpnII | GATC | 1 cut(s) | 280 |
| Eco130I | CCWWGG | 3 cut(s) | 158, 317, 409 |
| EcoT14I | CCWWGG | 3 cut(s) | 158, 317, 409 |
| EcoT22I | ATGCAT | 1 cut(s) | 485 |
| ErhI | CCWWGG | 3 cut(s) | 158, 317, 409 |
| FaeI | CATG | 2 cut(s) | 321, 487 |
| FaiI | YATR | 8 cut(s) | 175, 264, 275, 285, 287, 319, 435, 485 |
| FaqI | GGGAC | 1 cut(s) | 433 |
| FatI | CATG | 2 cut(s) | 317, 483 |
| FbaI | TGATCA | 1 cut(s) | 280 |
| FblI | GTMKAC | 1 cut(s) | 508 |
| Fnu4HI | GCNGC | 1 cut(s) | 415 |
| FokI | GGATG | 1 cut(s) | 387 |
| Fsp4HI | GCNGC | 1 cut(s) | 415 |
| FspBI | CTAG | 2 cut(s) | 36, 404 |
| GluI | GCNGC | 1 cut(s) | 415 |
| Hin1II | CATG | 2 cut(s) | 321, 487 |
| HindIII | AAGCTT | 1 cut(s) | 79 |
| Hpy166II | GTNNAC | 2 cut(s) | 353, 509 |
| Hpy188I | TCNGA | 2 cut(s) | 116, 335 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 242 |
| Hpy8I | GTNNAC | 2 cut(s) | 353, 509 |
| HpyAV | CCTTC | 1 cut(s) | 431 |
| HpyCH4III | ACNGT | 2 cut(s) | 308, 447 |
| HpyCH4IV | ACGT | 1 cut(s) | 16 |
| HpyCH4V | TGCA | 2 cut(s) | 138, 483 |
| HpyF3I | CTNAG | 2 cut(s) | 113, 332 |
| HpySE526I | ACGT | 1 cut(s) | 16 |
| Hsp92II | CATG | 2 cut(s) | 321, 487 |
| Ksp22I | TGATCA | 1 cut(s) | 280 |
| Kzo9I | GATC | 1 cut(s) | 280 |
| LpnPI | CCDG | 5 cut(s) | 53, 78, 129, 255, 435 |
| Lsp1109I | GCAGC | 1 cut(s) | 401 |
| MaeI | CTAG | 2 cut(s) | 36, 404 |
| MaeII | ACGT | 1 cut(s) | 16 |
| MaeIII | GTNAC | 2 cut(s) | 97, 363 |
| MalI | GATC | 1 cut(s) | 282 |
| MboI | GATC | 1 cut(s) | 280 |
| MboII | GAAGA | 2 cut(s) | 3, 136 |
| MluCI | AATT | 5 cut(s) | 59, 71, 203, 268, 559 |
| MnlI | CCTC | 3 cut(s) | 122, 183, 249 |
| Mph1103I | ATGCAT | 1 cut(s) | 485 |
| MroXI | GAANNNNTTC | 1 cut(s) | 217 |
| MseI | TTAA | 1 cut(s) | 562 |
| MslI | CAYNNNNRTG | 1 cut(s) | 488 |
| MspA1I | CMGCKG | 1 cut(s) | 251 |
| NcoI | CCATGG | 1 cut(s) | 317 |
| NdeII | GATC | 1 cut(s) | 280 |
| NlaIII | CATG | 2 cut(s) | 321, 487 |
| NmuCI | GTSAC | 1 cut(s) | 97 |
| NsiI | ATGCAT | 1 cut(s) | 485 |
| PdmI | GAANNNNTTC | 1 cut(s) | 217 |
| PkrI | GCNGC | 1 cut(s) | 416 |
| PvuII | CAGCTG | 1 cut(s) | 251 |
| RsaI | GTAC | 3 cut(s) | 131, 156, 462 |
| RsaNI | GTAC | 3 cut(s) | 130, 155, 461 |
| RseI | CAYNNNNRTG | 1 cut(s) | 488 |
| SaqAI | TTAA | 1 cut(s) | 562 |
| SatI | GCNGC | 1 cut(s) | 415 |
| Sau3AI | GATC | 1 cut(s) | 280 |
| SetI | ASST | 8 cut(s) | 19, 28, 83, 114, 253, 346, 434, 526 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 488 |
| Sse9I | AATT | 5 cut(s) | 59, 71, 203, 268, 559 |
| SspMI | CTAG | 2 cut(s) | 36, 404 |
| StyI | CCWWGG | 3 cut(s) | 158, 317, 409 |
| TaaI | ACNGT | 2 cut(s) | 308, 447 |
| TaiI | ACGT | 1 cut(s) | 19 |
| TaqI | TCGA | 2 cut(s) | 211, 327 |
| TasI | AATT | 5 cut(s) | 59, 71, 203, 268, 559 |
| TatI | WGTACW | 1 cut(s) | 129 |
| Tru1I | TTAA | 1 cut(s) | 562 |
| Tru9I | TTAA | 1 cut(s) | 562 |
| TscAI | CASTG | 1 cut(s) | 429 |
| TseFI | GTSAC | 1 cut(s) | 97 |
| TseI | GCWGC | 1 cut(s) | 414 |
| Tsp45I | GTSAC | 1 cut(s) | 97 |
| TspDTI | ATGAA | 2 cut(s) | 450, 461 |
| TspRI | CASTG | 1 cut(s) | 429 |
| XapI | RAATTY | 3 cut(s) | 59, 71, 203 |
| XmiI | GTMKAC | 1 cut(s) | 508 |
| XmnI | GAANNNNTTC | 1 cut(s) | 217 |
| XspI | CTAG | 2 cut(s) | 36, 404 |
| Zsp2I | ATGCAT | 1 cut(s) | 485 |