B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 719 |
| Acc16I | TGCGCA | 1 cut(s) | 883 |
| Acc36I | ACCTGC | 1 cut(s) | 719 |
| AccB1I | GGYRCC | 2 cut(s) | 428, 707 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 256 |
| AccII | CGCG | 5 cut(s) | 53, 134, 182, 420, 705 |
| AclWI | GGATC | 9 cut(s) | 12, 71, 110, 123, 373, 472, 572, 906, 980 |
| AcoI | YGGCCR | 1 cut(s) | 486 |
| AcsI | RAATTY | 4 cut(s) | 322, 716, 793, 982 |
| AcuI | CTGAAG | 1 cut(s) | 739 |
| AcyI | GRCGYC | 2 cut(s) | 213, 363 |
| AdeI | CACNNNGTG | 1 cut(s) | 907 |
| AfaI | GTAC | 1 cut(s) | 644 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 133, 256, 355, 692 |
| AgeI | ACCGGT | 1 cut(s) | 439 |
| AgsI | TTSAA | 3 cut(s) | 157, 220, 955 |
| AhlI | ACTAGT | 1 cut(s) | 121 |
| AjnI | CCWGG | 3 cut(s) | 186, 249, 450 |
| AluBI | AGCT | 3 cut(s) | 506, 529, 553 |
| AluI | AGCT | 3 cut(s) | 506, 529, 553 |
| Alw21I | GWGCWC | 4 cut(s) | 198, 496, 508, 531 |
| Alw26I | GTCTC | 5 cut(s) | 350, 542, 751, 868, 1069 |
| AlwI | GGATC | 9 cut(s) | 12, 71, 110, 123, 373, 472, 572, 906, 980 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 256 |
| AoxI | GGCC | 3 cut(s) | 222, 486, 808 |
| ApeKI | GCWGC | 4 cut(s) | 47, 550, 788, 1076 |
| ApoI | RAATTY | 4 cut(s) | 322, 716, 793, 982 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 191, 223 |
| AsiGI | ACCGGT | 1 cut(s) | 439 |
| AspLEI | GCGC | 2 cut(s) | 420, 884 |
| AspS9I | GGNCC | 4 cut(s) | 259, 448, 799, 809 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| AvaII | GGWCC | 3 cut(s) | 259, 448, 799 |
| BamHI | GGATCC | 1 cut(s) | 115 |
| BanI | GGYRCC | 2 cut(s) | 428, 707 |
| BanII | GRGCYC | 3 cut(s) | 336, 508, 531 |
| BauI | CACGAG | 1 cut(s) | 530 |
| BbsI | GAAGAC | 1 cut(s) | 208 |
| Bbv12I | GWGCWC | 4 cut(s) | 198, 496, 508, 531 |
| BbvI | GCAGC | 4 cut(s) | 34, 562, 775, 1063 |
| BceAI | ACGGC | 5 cut(s) | 44, 254, 387, 416, 940 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 410, 444 |
| BciT130I | CCWGG | 3 cut(s) | 188, 251, 452 |
| BclI | TGATCA | 1 cut(s) | 565 |
| BcoDI | GTCTC | 5 cut(s) | 350, 542, 751, 868, 1069 |
| BcuI | ACTAGT | 1 cut(s) | 121 |
| BfaI | CTAG | 1 cut(s) | 122 |
| BfmI | CTRYAG | 3 cut(s) | 202, 610, 1027 |
| BfuAI | ACCTGC | 1 cut(s) | 719 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 371 |
| BglII | AGATCT | 2 cut(s) | 394, 1023 |
| BisI | GCNGC | 7 cut(s) | 48, 51, 486, 551, 706, 789, 1077 |
| BlsI | GCNGC | 7 cut(s) | 49, 52, 487, 552, 707, 790, 1078 |
| Bme1390I | CCNGG | 3 cut(s) | 188, 251, 452 |
| Bme18I | GGWCC | 3 cut(s) | 259, 448, 799 |
| BmgT120I | GGNCC | 4 cut(s) | 259, 448, 799, 809 |
| BmiI | GGNNCC | 6 cut(s) | 117, 261, 375, 430, 709, 928 |
| BmrFI | CCNGG | 3 cut(s) | 188, 251, 452 |
| BmrI | ACTGGG | 1 cut(s) | 702 |
| BmsI | GCATC | 2 cut(s) | 148, 834 |
| BmuI | ACTGGG | 1 cut(s) | 702 |
| BpiI | GAAGAC | 1 cut(s) | 208 |
| BpuEI | CTTGAG | 2 cut(s) | 320, 635 |
| BsaAI | YACGTR | 1 cut(s) | 853 |
| BsaHI | GRCGYC | 2 cut(s) | 213, 363 |
| BsaI | GGTCTC | 2 cut(s) | 350, 1069 |
| BsaJI | CCNNGG | 4 cut(s) | 250, 274, 306, 451 |
| BsaWI | WCCGGW | 2 cut(s) | 355, 439 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 111, 141 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 133, 256, 355, 692 |
| Bse118I | RCCGGY | 1 cut(s) | 439 |
| Bse1I | ACTGG | 4 cut(s) | 419, 501, 697, 974 |
| BseBI | CCWGG | 3 cut(s) | 188, 251, 452 |
| BseDI | CCNNGG | 4 cut(s) | 250, 274, 306, 451 |
| BseGI | GGATG | 1 cut(s) | 84 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 133, 256, 355, 692 |
| BseMII | CTCAG | 2 cut(s) | 553, 618 |
| BseNI | ACTGG | 4 cut(s) | 419, 501, 697, 974 |
| BseRI | GAGGAG | 4 cut(s) | 8, 125, 206, 919 |
| BseX3I | CGGCCG | 1 cut(s) | 486 |
| BseXI | GCAGC | 4 cut(s) | 34, 562, 775, 1063 |
| BseYI | CCCAGC | 1 cut(s) | 656 |
| Bsh1236I | CGCG | 5 cut(s) | 53, 134, 182, 420, 705 |
| Bsh1285I | CGRYCG | 1 cut(s) | 489 |
| BshFI | GGCC | 3 cut(s) | 224, 488, 810 |
| BshNI | GGYRCC | 2 cut(s) | 428, 707 |
| BshTI | ACCGGT | 1 cut(s) | 439 |
| BsiEI | CGRYCG | 1 cut(s) | 489 |
| BsiHKAI | GWGCWC | 4 cut(s) | 198, 496, 508, 531 |
| BsiSI | CCGG | 6 cut(s) | 101, 319, 349, 356, 440, 489 |
| BslFI | GGGAC | 2 cut(s) | 709, 1005 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 133, 256, 355, 692 |
| BsmAI | GTCTC | 5 cut(s) | 350, 542, 751, 868, 1069 |
| BsmFI | GGGAC | 2 cut(s) | 709, 1005 |
| BsnI | GGCC | 3 cut(s) | 224, 488, 810 |
| Bso31I | GGTCTC | 2 cut(s) | 350, 1069 |
| Bsp1286I | GDGCHC | 5 cut(s) | 198, 336, 496, 508, 531 |
| BspANI | GGCC | 3 cut(s) | 224, 488, 810 |
| BspCNI | CTCAG | 2 cut(s) | 552, 617 |
| BspFNI | CGCG | 5 cut(s) | 53, 134, 182, 420, 705 |
| BspHI | TCATGA | 1 cut(s) | 568 |
| BspLI | GGNNCC | 6 cut(s) | 117, 261, 375, 430, 709, 928 |
| BspMAI | CTGCAG | 1 cut(s) | 1031 |
| BspMI | ACCTGC | 1 cut(s) | 719 |
| BspPI | GGATC | 9 cut(s) | 12, 71, 110, 123, 373, 472, 572, 906, 980 |
| BspT107I | GGYRCC | 2 cut(s) | 428, 707 |
| BspTNI | GGTCTC | 2 cut(s) | 350, 1069 |
| BsrFI | RCCGGY | 1 cut(s) | 439 |
| BsrI | ACTGG | 4 cut(s) | 419, 501, 697, 974 |
| BssAI | RCCGGY | 1 cut(s) | 439 |
| BssECI | CCNNGG | 4 cut(s) | 250, 274, 306, 451 |
| BssNI | GRCGYC | 2 cut(s) | 213, 363 |
| BssSI | CACGAG | 1 cut(s) | 530 |
| BssT1I | CCWWGG | 1 cut(s) | 306 |
| Bst2BI | CACGAG | 1 cut(s) | 530 |
| Bst2UI | CCWGG | 3 cut(s) | 188, 251, 452 |
| Bst4CI | ACNGT | 5 cut(s) | 71, 278, 563, 745, 1072 |
| Bst6I | CTCTTC | 1 cut(s) | 38 |
| BstACI | GRCGYC | 2 cut(s) | 213, 363 |
| BstBAI | YACGTR | 1 cut(s) | 853 |
| BstC8I | GCNNGC | 1 cut(s) | 184 |
| BstDEI | CTNAG | 2 cut(s) | 539, 604 |
| BstDSI | CCRYGG | 1 cut(s) | 274 |
| BstF5I | GGATG | 1 cut(s) | 84 |
| BstFNI | CGCG | 5 cut(s) | 53, 134, 182, 420, 705 |
| BstHHI | GCGC | 2 cut(s) | 420, 884 |
| BstMAI | GTCTC | 5 cut(s) | 350, 542, 751, 868, 1069 |
| BstMCI | CGRYCG | 1 cut(s) | 489 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 56, 72, 371, 491, 653, 711 |
| BstNI | CCWGG | 3 cut(s) | 188, 251, 452 |
| BstSCI | CCNGG | 3 cut(s) | 186, 249, 450 |
| BstSFI | CTRYAG | 3 cut(s) | 202, 610, 1027 |
| BstUI | CGCG | 5 cut(s) | 53, 134, 182, 420, 705 |
| BstV1I | GCAGC | 4 cut(s) | 34, 562, 775, 1063 |
| BstV2I | GAAGAC | 1 cut(s) | 208 |
| BstX2I | RGATCY | 3 cut(s) | 115, 394, 1023 |
| BstYI | RGATCY | 3 cut(s) | 115, 394, 1023 |
| BstZI | CGGCCG | 1 cut(s) | 486 |
| BsuRI | GGCC | 3 cut(s) | 224, 488, 810 |
| BtgI | CCRYGG | 1 cut(s) | 274 |
| BtsCI | GGATG | 1 cut(s) | 84 |
| BtsIMutI | CAGTG | 3 cut(s) | 494, 690, 763 |
| BveI | ACCTGC | 1 cut(s) | 719 |
| Cac8I | GCNNGC | 1 cut(s) | 184 |
| CaiI | CAGNNNCTG | 1 cut(s) | 256 |
| CciI | TCATGA | 1 cut(s) | 568 |
| CfoI | GCGC | 2 cut(s) | 420, 884 |
| Cfr10I | RCCGGY | 1 cut(s) | 439 |
| Cfr13I | GGNCC | 4 cut(s) | 259, 448, 799, 809 |
| CseI | GACGC | 3 cut(s) | 42, 202, 371 |
| Csp6I | GTAC | 1 cut(s) | 643 |
| CspAI | ACCGGT | 1 cut(s) | 439 |
| CviAII | CATG | 8 cut(s) | 468, 569, 597, 841, 867, 987, 1060, 1089 |
| CviQI | GTAC | 1 cut(s) | 643 |
| DdeI | CTNAG | 2 cut(s) | 539, 604 |
| DraIII | CACNNNGTG | 1 cut(s) | 907 |
| EaeI | YGGCCR | 1 cut(s) | 486 |
| EagI | CGGCCG | 1 cut(s) | 486 |
| Eam1104I | CTCTTC | 1 cut(s) | 38 |
| EarI | CTCTTC | 1 cut(s) | 38 |
| EciI | GGCGGA | 3 cut(s) | 46, 122, 221 |
| Ecl136II | GAGCTC | 2 cut(s) | 506, 529 |
| EclXI | CGGCCG | 1 cut(s) | 486 |
| Eco130I | CCWWGG | 1 cut(s) | 306 |
| Eco24I | GRGCYC | 3 cut(s) | 336, 508, 531 |
| Eco31I | GGTCTC | 2 cut(s) | 350, 1069 |
| Eco47I | GGWCC | 3 cut(s) | 259, 448, 799 |
| Eco52I | CGGCCG | 1 cut(s) | 486 |
| Eco53kI | GAGCTC | 2 cut(s) | 506, 529 |
| Eco57I | CTGAAG | 1 cut(s) | 739 |
| EcoICRI | GAGCTC | 2 cut(s) | 506, 529 |
| EcoRI | GAATTC | 1 cut(s) | 982 |
| EcoRII | CCWGG | 3 cut(s) | 186, 249, 450 |
| EcoT14I | CCWWGG | 1 cut(s) | 306 |
| EcoT38I | GRGCYC | 3 cut(s) | 336, 508, 531 |
| ErhI | CCWWGG | 1 cut(s) | 306 |
| FaeI | CATG | 8 cut(s) | 471, 572, 600, 844, 870, 990, 1063, 1092 |
| FaqI | GGGAC | 2 cut(s) | 709, 1005 |
| FatI | CATG | 8 cut(s) | 467, 568, 596, 840, 866, 986, 1059, 1088 |
| FbaI | TGATCA | 1 cut(s) | 565 |
| Fnu4HI | GCNGC | 7 cut(s) | 48, 51, 486, 551, 706, 789, 1077 |
| FokI | GGATG | 1 cut(s) | 71 |
| FriOI | GRGCYC | 3 cut(s) | 336, 508, 531 |
| Fsp4HI | GCNGC | 7 cut(s) | 48, 51, 486, 551, 706, 789, 1077 |
| FspBI | CTAG | 1 cut(s) | 122 |
| FspI | TGCGCA | 1 cut(s) | 883 |
| GlaI | GCGC | 2 cut(s) | 419, 883 |
| GluI | GCNGC | 7 cut(s) | 48, 51, 486, 551, 706, 789, 1077 |
| GsaI | CCCAGC | 1 cut(s) | 660 |
| HaeIII | GGCC | 3 cut(s) | 224, 488, 810 |
| HapII | CCGG | 6 cut(s) | 101, 319, 349, 356, 440, 489 |
| HgaI | GACGC | 3 cut(s) | 42, 202, 371 |
| HhaI | GCGC | 2 cut(s) | 420, 884 |
| Hin1I | GRCGYC | 2 cut(s) | 213, 363 |
| Hin1II | CATG | 8 cut(s) | 471, 572, 600, 844, 870, 990, 1063, 1092 |
| Hin6I | GCGC | 2 cut(s) | 418, 882 |
| HinP1I | GCGC | 2 cut(s) | 418, 882 |
| HinfI | GANTC | 3 cut(s) | 535, 602, 861 |
| HpaII | CCGG | 6 cut(s) | 101, 319, 349, 356, 440, 489 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy166II | GTNNAC | 4 cut(s) | 274, 559, 620, 802 |
| Hpy188I | TCNGA | 6 cut(s) | 89, 170, 295, 378, 387, 945 |
| Hpy188III | TCNNGA | 5 cut(s) | 337, 532, 569, 581, 896 |
| Hpy8I | GTNNAC | 4 cut(s) | 274, 559, 620, 802 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 6 cut(s) | 175, 334, 392, 494, 670, 1004 |
| HpyCH4III | ACNGT | 5 cut(s) | 71, 278, 563, 745, 1072 |
| HpyCH4IV | ACGT | 1 cut(s) | 852 |
| HpyCH4V | TGCA | 6 cut(s) | 714, 791, 818, 844, 1029, 1084 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 56, 72, 371, 491, 653, 711 |
| HpyF3I | CTNAG | 2 cut(s) | 539, 604 |
| HpySE526I | ACGT | 1 cut(s) | 852 |
| Hsp92I | GRCGYC | 2 cut(s) | 213, 363 |
| Hsp92II | CATG | 8 cut(s) | 471, 572, 600, 844, 870, 990, 1063, 1092 |
| HspAI | GCGC | 2 cut(s) | 418, 882 |
| Ksp22I | TGATCA | 1 cut(s) | 565 |
| LmnI | GCTCC | 9 cut(s) | 136, 193, 379, 491, 503, 526, 667, 932, 946 |
| Lsp1109I | GCAGC | 4 cut(s) | 34, 562, 775, 1063 |
| LweI | GCATC | 2 cut(s) | 148, 834 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MaeII | ACGT | 1 cut(s) | 852 |
| MaeIII | GTNAC | 4 cut(s) | 280, 433, 599, 920 |
| MboII | GAAGA | 5 cut(s) | 25, 208, 389, 596, 788 |
| MfeI | CAATTG | 1 cut(s) | 819 |
| MflI | RGATCY | 3 cut(s) | 115, 394, 1023 |
| MhlI | GDGCHC | 5 cut(s) | 198, 336, 496, 508, 531 |
| MluCI | AATT | 6 cut(s) | 322, 716, 783, 793, 819, 982 |
| MlyI | GAGTC | 3 cut(s) | 544, 596, 870 |
| MmeI | TCCRAC | 3 cut(s) | 112, 410, 774 |
| MslI | CAYNNNNRTG | 1 cut(s) | 573 |
| MspA1I | CMGCKG | 1 cut(s) | 47 |
| MspI | CCGG | 6 cut(s) | 101, 319, 349, 356, 440, 489 |
| MspR9I | CCNGG | 3 cut(s) | 188, 251, 452 |
| MunI | CAATTG | 1 cut(s) | 819 |
| MvaI | CCWGG | 3 cut(s) | 188, 251, 452 |
| MvnI | CGCG | 5 cut(s) | 53, 134, 182, 420, 705 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 56, 72, 371, 491, 653, 711 |
| NlaIII | CATG | 8 cut(s) | 471, 572, 600, 844, 870, 990, 1063, 1092 |
| NlaIV | GGNNCC | 6 cut(s) | 117, 261, 375, 430, 709, 928 |
| NmeAIII | GCCGAG | 1 cut(s) | 260 |
| NmuCI | GTSAC | 3 cut(s) | 280, 433, 599 |
| NsbI | TGCGCA | 1 cut(s) | 883 |
| PagI | TCATGA | 1 cut(s) | 568 |
| PaqCI | CACCTGC | 1 cut(s) | 719 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 417 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 256 |
| PinAI | ACCGGT | 1 cut(s) | 439 |
| PkrI | GCNGC | 7 cut(s) | 49, 52, 487, 552, 707, 790, 1078 |
| PleI | GAGTC | 3 cut(s) | 543, 596, 869 |
| PpsI | GAGTC | 3 cut(s) | 543, 596, 869 |
| Ppu21I | YACGTR | 1 cut(s) | 853 |
| Psp124BI | GAGCTC | 2 cut(s) | 508, 531 |
| Psp6I | CCWGG | 3 cut(s) | 186, 249, 450 |
| PspFI | CCCAGC | 1 cut(s) | 656 |
| PspGI | CCWGG | 3 cut(s) | 186, 249, 450 |
| PspN4I | GGNNCC | 6 cut(s) | 117, 261, 375, 430, 709, 928 |
| PspPI | GGNCC | 4 cut(s) | 259, 448, 799, 809 |
| PstI | CTGCAG | 1 cut(s) | 1031 |
| PstNI | CAGNNNCTG | 1 cut(s) | 256 |
| PsuI | RGATCY | 3 cut(s) | 115, 394, 1023 |
| RsaI | GTAC | 1 cut(s) | 644 |
| RsaNI | GTAC | 1 cut(s) | 643 |
| RseI | CAYNNNNRTG | 1 cut(s) | 573 |
| SacI | GAGCTC | 2 cut(s) | 508, 531 |
| SatI | GCNGC | 7 cut(s) | 48, 51, 486, 551, 706, 789, 1077 |
| Sau96I | GGNCC | 4 cut(s) | 259, 448, 799, 809 |
| SchI | GAGTC | 3 cut(s) | 544, 596, 870 |
| ScrFI | CCNGG | 3 cut(s) | 188, 251, 452 |
| SduI | GDGCHC | 5 cut(s) | 198, 336, 496, 508, 531 |
| SfaNI | GCATC | 2 cut(s) | 148, 834 |
| SfcI | CTRYAG | 3 cut(s) | 202, 610, 1027 |
| SinI | GGWCC | 3 cut(s) | 259, 448, 799 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 573 |
| SmlI | CTYRAG | 2 cut(s) | 335, 650 |
| SmoI | CTYRAG | 2 cut(s) | 335, 650 |
| SpeI | ACTAGT | 1 cut(s) | 121 |
| Sse9I | AATT | 6 cut(s) | 322, 716, 783, 793, 819, 982 |
| SspMI | CTAG | 1 cut(s) | 122 |
| SstI | GAGCTC | 2 cut(s) | 508, 531 |
| StyD4I | CCNGG | 3 cut(s) | 186, 249, 450 |
| StyI | CCWWGG | 1 cut(s) | 306 |
| TaaI | ACNGT | 5 cut(s) | 71, 278, 563, 745, 1072 |
| TaiI | ACGT | 1 cut(s) | 855 |
| TaqI | TCGA | 1 cut(s) | 411 |
| TasI | AATT | 6 cut(s) | 322, 716, 783, 793, 819, 982 |
| TauI | GCSGC | 3 cut(s) | 53, 488, 708 |
| TscAI | CASTG | 3 cut(s) | 501, 697, 763 |
| TseFI | GTSAC | 3 cut(s) | 280, 433, 599 |
| TseI | GCWGC | 4 cut(s) | 47, 550, 788, 1076 |
| Tsp45I | GTSAC | 3 cut(s) | 280, 433, 599 |
| TspDTI | ATGAA | 4 cut(s) | 73, 585, 829, 975 |
| TspRI | CASTG | 3 cut(s) | 501, 697, 763 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 256 |
| VpaK11BI | GGWCC | 3 cut(s) | 259, 448, 799 |
| XapI | RAATTY | 4 cut(s) | 322, 716, 793, 982 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 458 |
| XspI | CTAG | 1 cut(s) | 122 |