B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 783 |
| Acc16I | TGCGCA | 1 cut(s) | 332 |
| AciI | CCGC | 2 cut(s) | 10, 110 |
| AclWI | GGATC | 2 cut(s) | 90, 465 |
| AcsI | RAATTY | 1 cut(s) | 593 |
| AcuI | CTGAAG | 6 cut(s) | 182, 280, 324, 450, 456, 462 |
| AcvI | CACGTG | 1 cut(s) | 15 |
| AcyI | GRCGYC | 1 cut(s) | 780 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 30, 31, 176, 374, 790 |
| AflIII | ACRYGT | 1 cut(s) | 14 |
| AgsI | TTSAA | 1 cut(s) | 459 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 563, 595 |
| AluBI | AGCT | 7 cut(s) | 119, 261, 300, 434, 440, 557, 734 |
| AluI | AGCT | 7 cut(s) | 119, 261, 300, 434, 440, 557, 734 |
| AlwI | GGATC | 2 cut(s) | 90, 465 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 734 |
| AoxI | GGCC | 1 cut(s) | 21 |
| ApaI | GGGCCC | 1 cut(s) | 25 |
| ApeKI | GCWGC | 1 cut(s) | 116 |
| ApoI | RAATTY | 1 cut(s) | 593 |
| AspLEI | GCGC | 1 cut(s) | 333 |
| AspS9I | GGNCC | 4 cut(s) | 21, 22, 274, 398 |
| AsuC2I | CCSGG | 1 cut(s) | 833 |
| AsuHPI | GGTGA | 5 cut(s) | 201, 293, 356, 671, 788 |
| AsuNHI | GCTAGC | 1 cut(s) | 257 |
| AvaII | GGWCC | 2 cut(s) | 274, 398 |
| BaeGI | GKGCMC | 1 cut(s) | 25 |
| BanII | GRGCYC | 2 cut(s) | 25, 838 |
| BbrPI | CACGTG | 1 cut(s) | 15 |
| BbvI | GCAGC | 1 cut(s) | 128 |
| BccI | CCATC | 2 cut(s) | 237, 698 |
| BcnI | CCSGG | 1 cut(s) | 833 |
| BfaI | CTAG | 4 cut(s) | 258, 656, 767, 785 |
| BfmI | CTRYAG | 1 cut(s) | 44 |
| BglII | AGATCT | 1 cut(s) | 521 |
| BisI | GCNGC | 1 cut(s) | 117 |
| BlsI | GCNGC | 1 cut(s) | 118 |
| Bme1390I | CCNGG | 1 cut(s) | 833 |
| Bme18I | GGWCC | 2 cut(s) | 274, 398 |
| BmgT120I | GGNCC | 4 cut(s) | 21, 22, 274, 398 |
| BmiI | GGNNCC | 2 cut(s) | 23, 168 |
| BmrFI | CCNGG | 1 cut(s) | 833 |
| BmsI | GCATC | 1 cut(s) | 342 |
| BmtI | GCTAGC | 1 cut(s) | 261 |
| BpuMI | CCSGG | 1 cut(s) | 833 |
| BsaAI | YACGTR | 1 cut(s) | 15 |
| BsaHI | GRCGYC | 1 cut(s) | 780 |
| BsaJI | CCNNGG | 1 cut(s) | 277 |
| BsaWI | WCCGGW | 1 cut(s) | 222 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 58, 88, 369, 375, 399, 405 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 30, 31, 176, 374, 790 |
| Bse118I | RCCGGY | 1 cut(s) | 112 |
| Bse1I | ACTGG | 1 cut(s) | 276 |
| BseDI | CCNNGG | 1 cut(s) | 277 |
| BseGI | GGATG | 4 cut(s) | 231, 248, 352, 560 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 30, 31, 176, 374, 790 |
| BseNI | ACTGG | 1 cut(s) | 276 |
| BseSI | GKGCMC | 1 cut(s) | 25 |
| BseXI | GCAGC | 1 cut(s) | 128 |
| BsgI | GTGCAG | 1 cut(s) | 835 |
| BshFI | GGCC | 1 cut(s) | 23 |
| BsiSI | CCGG | 3 cut(s) | 113, 223, 832 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 30, 31, 176, 374, 790 |
| BsmI | GAATGC | 1 cut(s) | 717 |
| BsnI | GGCC | 1 cut(s) | 23 |
| Bsp120I | GGGCCC | 1 cut(s) | 21 |
| Bsp1286I | GDGCHC | 2 cut(s) | 25, 838 |
| Bsp143I | GATC | 4 cut(s) | 82, 136, 470, 521 |
| BspACI | CCGC | 2 cut(s) | 10, 110 |
| BspANI | GGCC | 1 cut(s) | 23 |
| BspLI | GGNNCC | 2 cut(s) | 23, 168 |
| BspMAI | CTGCAG | 1 cut(s) | 48 |
| BspOI | GCTAGC | 1 cut(s) | 261 |
| BspPI | GGATC | 2 cut(s) | 90, 465 |
| BsrFI | RCCGGY | 1 cut(s) | 112 |
| BsrI | ACTGG | 1 cut(s) | 276 |
| BssAI | RCCGGY | 1 cut(s) | 112 |
| BssECI | CCNNGG | 1 cut(s) | 277 |
| BssMI | GATC | 4 cut(s) | 82, 136, 470, 521 |
| BssNI | GRCGYC | 1 cut(s) | 780 |
| BssT1I | CCWWGG | 1 cut(s) | 277 |
| Bst4CI | ACNGT | 2 cut(s) | 676, 721 |
| Bst6I | CTCTTC | 2 cut(s) | 243, 765 |
| BstACI | GRCGYC | 1 cut(s) | 780 |
| BstBAI | YACGTR | 1 cut(s) | 15 |
| BstC8I | GCNNGC | 2 cut(s) | 114, 259 |
| BstF5I | GGATG | 4 cut(s) | 231, 248, 352, 560 |
| BstHHI | GCGC | 1 cut(s) | 333 |
| BstKTI | GATC | 4 cut(s) | 85, 139, 473, 524 |
| BstMBI | GATC | 4 cut(s) | 82, 136, 470, 521 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 306 |
| BstNSI | RCATGY | 1 cut(s) | 317 |
| BstSCI | CCNGG | 1 cut(s) | 831 |
| BstSFI | CTRYAG | 1 cut(s) | 44 |
| BstSLI | GKGCMC | 1 cut(s) | 25 |
| BstV1I | GCAGC | 1 cut(s) | 128 |
| BstX2I | RGATCY | 3 cut(s) | 82, 470, 521 |
| BstYI | RGATCY | 3 cut(s) | 82, 470, 521 |
| BsuRI | GGCC | 1 cut(s) | 23 |
| BtsCI | GGATG | 4 cut(s) | 231, 248, 352, 560 |
| BtsIMutI | CAGTG | 2 cut(s) | 400, 686 |
| Cac8I | GCNNGC | 2 cut(s) | 114, 259 |
| CaiI | CAGNNNCTG | 1 cut(s) | 734 |
| CfoI | GCGC | 1 cut(s) | 333 |
| Cfr10I | RCCGGY | 1 cut(s) | 112 |
| Cfr13I | GGNCC | 4 cut(s) | 21, 22, 274, 398 |
| CviAII | CATG | 2 cut(s) | 314, 534 |
| DpnI | GATC | 4 cut(s) | 84, 138, 472, 523 |
| DpnII | GATC | 4 cut(s) | 82, 136, 470, 521 |
| Eam1104I | CTCTTC | 2 cut(s) | 243, 765 |
| EarI | CTCTTC | 2 cut(s) | 243, 765 |
| EciI | GGCGGA | 1 cut(s) | 99 |
| Eco130I | CCWWGG | 1 cut(s) | 277 |
| Eco24I | GRGCYC | 2 cut(s) | 25, 838 |
| Eco47I | GGWCC | 2 cut(s) | 274, 398 |
| Eco57I | CTGAAG | 6 cut(s) | 182, 280, 324, 450, 456, 462 |
| Eco72I | CACGTG | 1 cut(s) | 15 |
| EcoO109I | RGGNCCY | 1 cut(s) | 21 |
| EcoT14I | CCWWGG | 1 cut(s) | 277 |
| EcoT38I | GRGCYC | 2 cut(s) | 25, 838 |
| ErhI | CCWWGG | 1 cut(s) | 277 |
| FaeI | CATG | 2 cut(s) | 317, 537 |
| FaiI | YATR | 9 cut(s) | 132, 153, 155, 315, 353, 361, 495, 535, 584 |
| FatI | CATG | 2 cut(s) | 313, 533 |
| Fnu4HI | GCNGC | 1 cut(s) | 117 |
| FokI | GGATG | 4 cut(s) | 238, 255, 359, 547 |
| FriOI | GRGCYC | 2 cut(s) | 25, 838 |
| Fsp4HI | GCNGC | 1 cut(s) | 117 |
| FspAI | RTGCGCAY | 1 cut(s) | 332 |
| FspBI | CTAG | 4 cut(s) | 258, 656, 767, 785 |
| FspI | TGCGCA | 1 cut(s) | 332 |
| GlaI | GCGC | 1 cut(s) | 332 |
| GluI | GCNGC | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 23 |
| HapII | CCGG | 3 cut(s) | 113, 223, 832 |
| HhaI | GCGC | 1 cut(s) | 333 |
| Hin1I | GRCGYC | 1 cut(s) | 780 |
| Hin1II | CATG | 2 cut(s) | 317, 537 |
| Hin6I | GCGC | 1 cut(s) | 331 |
| HinP1I | GCGC | 1 cut(s) | 331 |
| HinfI | GANTC | 2 cut(s) | 67, 73 |
| HpaII | CCGG | 3 cut(s) | 113, 223, 832 |
| HphI | GGTGA | 5 cut(s) | 201, 293, 356, 671, 788 |
| Hpy166II | GTNNAC | 1 cut(s) | 398 |
| Hpy188I | TCNGA | 6 cut(s) | 39, 72, 304, 326, 521, 526 |
| Hpy188III | TCNNGA | 6 cut(s) | 77, 160, 218, 590, 729, 767 |
| Hpy8I | GTNNAC | 1 cut(s) | 398 |
| Hpy99I | CGWCG | 1 cut(s) | 219 |
| HpyAV | CCTTC | 6 cut(s) | 94, 157, 232, 299, 304, 614 |
| HpyCH4III | ACNGT | 2 cut(s) | 676, 721 |
| HpyCH4IV | ACGT | 3 cut(s) | 14, 780, 808 |
| HpyCH4V | TGCA | 4 cut(s) | 46, 599, 684, 816 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 306 |
| HpySE526I | ACGT | 3 cut(s) | 14, 780, 808 |
| Hsp92I | GRCGYC | 1 cut(s) | 780 |
| Hsp92II | CATG | 2 cut(s) | 317, 537 |
| HspAI | GCGC | 1 cut(s) | 331 |
| KroI | GCCGGC | 1 cut(s) | 112 |
| KroNI | GCCGGC | 1 cut(s) | 114 |
| Kzo9I | GATC | 4 cut(s) | 82, 136, 470, 521 |
| LmnI | GCTCC | 2 cut(s) | 9, 731 |
| Lsp1109I | GCAGC | 1 cut(s) | 128 |
| LweI | GCATC | 1 cut(s) | 342 |
| MaeI | CTAG | 4 cut(s) | 258, 656, 767, 785 |
| MaeII | ACGT | 3 cut(s) | 14, 780, 808 |
| MaeIII | GTNAC | 5 cut(s) | 218, 281, 632, 659, 776 |
| MalI | GATC | 4 cut(s) | 84, 138, 472, 523 |
| MboI | GATC | 4 cut(s) | 82, 136, 470, 521 |
| MboII | GAAGA | 4 cut(s) | 109, 260, 720, 782 |
| MfeI | CAATTG | 1 cut(s) | 172 |
| MflI | RGATCY | 3 cut(s) | 82, 470, 521 |
| MhlI | GDGCHC | 2 cut(s) | 25, 838 |
| MluCI | AATT | 4 cut(s) | 172, 197, 459, 593 |
| MlyI | GAGTC | 2 cut(s) | 76, 82 |
| MmeI | TCCRAC | 2 cut(s) | 719, 771 |
| MnlI | CCTC | 9 cut(s) | 17, 73, 117, 222, 399, 418, 484, 766, 796 |
| MroNI | GCCGGC | 1 cut(s) | 112 |
| MseI | TTAA | 2 cut(s) | 540, 566 |
| MslI | CAYNNNNRTG | 1 cut(s) | 492 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| MspI | CCGG | 3 cut(s) | 113, 223, 832 |
| MspR9I | CCNGG | 1 cut(s) | 833 |
| MunI | CAATTG | 1 cut(s) | 172 |
| Mva1269I | GAATGC | 1 cut(s) | 717 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 306 |
| NaeI | GCCGGC | 1 cut(s) | 114 |
| NciI | CCSGG | 1 cut(s) | 833 |
| NdeII | GATC | 4 cut(s) | 82, 136, 470, 521 |
| NgoMIV | GCCGGC | 1 cut(s) | 112 |
| NheI | GCTAGC | 1 cut(s) | 257 |
| NlaIII | CATG | 2 cut(s) | 317, 537 |
| NlaIV | GGNNCC | 2 cut(s) | 23, 168 |
| NmuCI | GTSAC | 5 cut(s) | 218, 281, 632, 659, 776 |
| NsbI | TGCGCA | 1 cut(s) | 332 |
| NspI | RCATGY | 1 cut(s) | 317 |
| PctI | GAATGC | 1 cut(s) | 717 |
| PdiI | GCCGGC | 1 cut(s) | 114 |
| PkrI | GCNGC | 1 cut(s) | 118 |
| PleI | GAGTC | 2 cut(s) | 75, 81 |
| PmaCI | CACGTG | 1 cut(s) | 15 |
| PmlI | CACGTG | 1 cut(s) | 15 |
| PpsI | GAGTC | 2 cut(s) | 75, 81 |
| Ppu21I | YACGTR | 1 cut(s) | 15 |
| PspCI | CACGTG | 1 cut(s) | 15 |
| PspN4I | GGNNCC | 2 cut(s) | 23, 168 |
| PspOMI | GGGCCC | 1 cut(s) | 21 |
| PspPI | GGNCC | 4 cut(s) | 21, 22, 274, 398 |
| PstI | CTGCAG | 1 cut(s) | 48 |
| PstNI | CAGNNNCTG | 1 cut(s) | 734 |
| PsuI | RGATCY | 3 cut(s) | 82, 470, 521 |
| PvuII | CAGCTG | 1 cut(s) | 119 |
| RseI | CAYNNNNRTG | 1 cut(s) | 492 |
| SaqAI | TTAA | 2 cut(s) | 540, 566 |
| SatI | GCNGC | 1 cut(s) | 117 |
| Sau3AI | GATC | 4 cut(s) | 82, 136, 470, 521 |
| Sau96I | GGNCC | 4 cut(s) | 21, 22, 274, 398 |
| SchI | GAGTC | 2 cut(s) | 76, 82 |
| ScrFI | CCNGG | 1 cut(s) | 833 |
| SduI | GDGCHC | 2 cut(s) | 25, 838 |
| SfaNI | GCATC | 1 cut(s) | 342 |
| SfcI | CTRYAG | 1 cut(s) | 44 |
| SinI | GGWCC | 2 cut(s) | 274, 398 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 492 |
| Sse9I | AATT | 4 cut(s) | 172, 197, 459, 593 |
| SsiI | CCGC | 2 cut(s) | 10, 110 |
| SspMI | CTAG | 4 cut(s) | 258, 656, 767, 785 |
| StyD4I | CCNGG | 1 cut(s) | 831 |
| StyI | CCWWGG | 1 cut(s) | 277 |
| TaaI | ACNGT | 2 cut(s) | 676, 721 |
| TaiI | ACGT | 3 cut(s) | 17, 783, 811 |
| TaqI | TCGA | 1 cut(s) | 824 |
| TasI | AATT | 4 cut(s) | 172, 197, 459, 593 |
| Tru1I | TTAA | 2 cut(s) | 540, 566 |
| Tru9I | TTAA | 2 cut(s) | 540, 566 |
| TscAI | CASTG | 2 cut(s) | 400, 686 |
| TseFI | GTSAC | 5 cut(s) | 218, 281, 632, 659, 776 |
| TseI | GCWGC | 1 cut(s) | 116 |
| Tsp45I | GTSAC | 5 cut(s) | 218, 281, 632, 659, 776 |
| TspDTI | ATGAA | 2 cut(s) | 498, 571 |
| TspRI | CASTG | 2 cut(s) | 400, 686 |
| VpaK11BI | GGWCC | 2 cut(s) | 274, 398 |
| XapI | RAATTY | 1 cut(s) | 593 |
| XbaI | TCTAGA | 1 cut(s) | 766 |
| XceI | RCATGY | 1 cut(s) | 317 |
| XspI | CTAG | 4 cut(s) | 258, 656, 767, 785 |
| ZraI | GACGTC | 1 cut(s) | 781 |