Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0000407

Physical Location & Seq

Genomic Coordinates Reverse (-)

3333141 .. 3339167

Gene Structure 6027 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG050700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGCTACATTTCCACGTCCTATGGCTTCTCCGAGCTTTTGCCTGAAGATTGTCACTGCTAACGATCTCCGAGATGGCAAGGAACTTCCTGAGACAGCCGTAAAGAAGTATGGACATTGTATGGCAGAGTCCATATTCCTCAAGGCTCCAAATTGTGGGACATGGTGGCCAATTGAAGTGAAAAGGTCAGTTCGTGGTGGCCGGATGTGGTTACACAAGGGATGGCAAGACTTTGCAAACTTTTACTCGCTGGACCAGGGCTACTTTGCATTGTTCACCTATGAAGGCGAACATTCCCATTTCCTAGTACGCCTTTTTCACTGGAATGATATGGAAATAGACTACCCTATTCATGGAGGAGGAGTGCCAAAAAGGAAAAGAACAGGAGCTAATCGAAACACCCCTCCTGCCTATTTAGAGGCTAGAACCAGTCCAACTTCCTCTGGATCCTCGACTGATGAAAACCAAAATGATCTTTCCACAGCTACTAGTTTCAAATCTGACAAGCCACTTCTTATGCTCAGAATGACAGCTACATATATACGCTGCTCTGGCGCGGAACTTCCAGAGACAGCTGTGAGGAAGTATGGAAATTGTATGGCTGATCATATATTCCTTGAAGTGCCTAACTGTGGAAAGCCATGGGAAGTCGAACTCAGAACATCAGCTCTTGGTGGACGAATGTGGTTACTAAAGGGATGGGAAGAGTTTGCTAACTTTTACTCACTAGACCAAGGCTGCTTTCCAGTGTTCAGCTATGAAGGAAAACAGTCCCATTTCCAAGTACGCATTTTTCATTGGAAACGCATGGAAATGGATTACCCTATTCGTAGACGAGGTACATTCTCACGTGCAATGGCTTCTTCCGGCAAGAGAGATGGAAAAGGACCTGCCTTTCCGGAGGACTATCCAAGCTTCTTCTTAAACATTGTTACTGATGACGATCTCCTAGATGGGAAGGAACTTCCAGAGCCAGCTGTGAGGAAGTACAGAAATTGCATGGCAGATCATATATTCCTCGAGGTTCCAAACTGCGAAAAACCATGGAAATTGGAATTGAGAAGATCAGCTCGTGGTGGCCGAATGTGGTTAAACAAGGGATGGCAAGAGTTTGCCAACTTTTACTCACTAGATGAAGGCTGCTTAGCAGTGTTCAGCTATGAAGGCGAACATTCTCATTTCCAAGTACGTGTTTTTCAGTGGAATGATATGGAATTAGATTACCCTATTCATGGAGGAGGAGTTGATGGCAGACCAAAAAGGAAAAAAACAGGAGCTAATCAAGACATGCCTCCTGCCCATTTAGAAACTAGAGCCGCTTCAATTTCCTCCGGATCCTCAGCTGATGAACACCAAAACGATCTTACTGCAGCTGCCAGTTTCAAATCTAACAAGCCATTTTTTATGCTTAACATCTGTGCTTCATACATACAACTCGGTTTCGCGCACATAAATCGATCTTTTGCCAAGGAACATCTCTGTAGACCAGGCACTTCTTGCGATGTGACCCTGCAGATTTCAGGTGAGAGAGTTTGGACTGCTGTGTGCACTGCCACCGAACATAGAGATCAGAAAATATATACTAGAATTTCAGGTGCTGGATGGAAAGCATTTCAGCAGGACAATCATCTGGTAAAAGGTAATATCTGTGTGTTCGAGTTGATAGAGGAGCGTACATTCAAAGTTTCCATATTCCGAACTAAAGTGAACATTAATAGGCAAACTGAGGAAAAGGATATGGAAATAGATTACCCTATTCATGGAGGAGGTATGTATGTGTGGAAATCTTGTAAGTTCCATTTGAAAATTTTATCAGACTCTTCCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

609

Amino Acids

69.61

Weight (kDa)

8.45

Isoelectric Point (pI)

47.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	18 - 106	5.4e-08	B3 DNA binding domain
B3	PF02362	183 - 265	1.2e-07	B3 DNA binding domain
B3	PF02362	320 - 399	2.8e-08	B3 DNA binding domain
B3	PF02362	474 - 567	3.7e-11	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000407)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g29511 FvH4_5g16850 FvH4_5g16850 FvH4_5g16850 FvH4_5g16850 FvH4_6g40050 FvH4_7g32411 FvH4_7g32411 FvH4_7g32412 FvH4_7g32412 FvH4_7g32412 FvH4_7g32412 FvH4_7g32412 FvH4_7g32750
rosa_chinensis	RchiOBHm_Chr1g0382001 RchiOBHm_Chr1g0382011 RchiOBHm_Chr7g0179221 RchiOBHm_Chr7g0182451 RchiOBHm_Chr7g0182461 RchiOBHm_Chr7g0182471 RchiOBHm_Chr7g0182511 RchiOBHm_Chr7g0211791
rosa_laevigata	RLG00000002969 RLG00000005122 RLG00000005123 RLG00000026188 RLG00000026193 RLG00000026194
rosa_multiflora	Rmu_co8485709.1_g000001 Rmu_sc0000110.1_g000003 Rmu_sc0006047.1_g000007 Rmu_sc0006047.1_g000011 Rmu_sc0006047.1_g000015 Rmu_sc0006047.1_g000016 Rmu_sc0007448.1_g000001 Rmu_sc0009005.1_g000015 Rmu_sc0009991.1_g000003 Rmu_sc0016160.1_g000004 Rmu_sc0030974.1_g000004 Rmu_sc0030974.1_g000005 Rmu_sc0034215.1_g000004
rosa_roxburghii	Rroxscaffold_3G00247430 Rroxscaffold_3G00271240 Rroxscaffold_3G00271250 Rroxscaffold_3G00274210 Rroxscaffold_4G00278270
rosa_rugosa	Rorug01G0432800 Rorug01G0432900 Rorug01G0432900 Rorug01G0432900 Rorug01G0433000 Rorug06G0422300 Rorug06G0422400 Rorug06G0447800 Rorug06G0447900 Rorug06G0448000 Rorug07G0128700
rosa_samantha	Rh1AG456100 Rh1AG456200 Rh1AG456500 Rh1AG457000 Rh1AG457600 Rh1AG457700 Rh1BG413200 Rh1CG428100 Rh1CG428200 Rh1DG445500 Rh2DG673100 Rh7AG021600 Rh7AG051100 Rh7AG051200 Rh7AG051300 Rh7AG051600 Rh7AG261400 Rh7BG021600 Rh7BG050700 Rh7BG050800 Rh7BG255000 Rh7CG022800 Rh7CG052200 Rh7CG052300 Rh7CG052400 Rh7CG052500 Rh7CG278000 Rh7DG022200 Rh7DG050000 Rh7DG050100 Rh7DG050200 Rh7DG050600 Rh7DG050700 Rh7DG268000
rosa_wichuraiana	Rw1G041300 Rw1G041310 Rw1G041540 Rw1G041550 Rw7G001780 Rw7G004150 Rw7G004160 Rw7G004170 Rw7G022290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1019
Acc36I	ACCTGC	1 cut(s)	898
AccB7I	CCANNNNNTGG	1 cut(s)	155
AccI	GTMKAC	2 cut(s)	832, 1483
AccII	CGCG	2 cut(s)	557, 1445
AccIII	TCCGGA	2 cut(s)	898, 1331
AciI	CCGC	2 cut(s)	557, 1317
AclWI	GGATC	4 cut(s)	441, 454, 1329, 1342
AcoI	YGGCCR	3 cut(s)	167, 199, 1078
AcsI	RAATTY	2 cut(s)	1587, 1806
AcuI	CTGAAG	1 cut(s)	65
AcvI	CACGTG	1 cut(s)	851
AfaI	GTAC	6 cut(s)	309, 786, 841, 989, 1188, 1675
AfiI	CCNNNNNNNGG	5 cut(s)	155, 353, 632, 1232, 1760
AflIII	ACRYGT	1 cut(s)	1189
AgsI	TTSAA	7 cut(s)	176, 496, 620, 1323, 1384, 1681, 1804
AhlI	ACTAGT	1 cut(s)	488
AjiI	CACGTC	1 cut(s)	17
AjnI	CCWGG	2 cut(s)	255, 1486
AjuI	GAANNNNNNNTTGG	2 cut(s)	726, 758
Alw21I	GWGCWC	1 cut(s)	1550
Alw26I	GTCTC	2 cut(s)	86, 563
Alw44I	GTGCAC	1 cut(s)	1546
AlwI	GGATC	4 cut(s)	441, 454, 1329, 1342
AlwNI	CAGNNNCTG	1 cut(s)	1598
Ama87I	CYCGRG	1 cut(s)	1019
Aor13HI	TCCGGA	2 cut(s)	898, 1331
AoxI	GGCC	3 cut(s)	167, 199, 1078
ApaLI	GTGCAC	1 cut(s)	1546
ApeKI	GCWGC	5 cut(s)	546, 738, 1140, 1370, 1373
ApoI	RAATTY	2 cut(s)	1587, 1806
AseI	ATTAAT	1 cut(s)	1713
AspLEI	GCGC	2 cut(s)	557, 1447
AspS9I	GGNCC	2 cut(s)	253, 887
AsuHPI	GGTGA	2 cut(s)	268, 1535
AvaI	CYCGRG	1 cut(s)	1019
AvaII	GGWCC	2 cut(s)	253, 887
BaeGI	GKGCMC	1 cut(s)	1550
BalI	TGGCCA	1 cut(s)	169
BamHI	GGATCC	2 cut(s)	446, 1334
BauI	CACGAG	1 cut(s)	1071
BbrPI	CACGTG	1 cut(s)	851
Bbv12I	GWGCWC	1 cut(s)	1550
BbvCI	CCTCAGC	1 cut(s)	1339
BbvI	GCAGC	5 cut(s)	533, 725, 1127, 1360, 1382
BccI	CCATC	8 cut(s)	68, 216, 693, 872, 947, 1095, 1241, 1596
BceAI	ACGGC	1 cut(s)	83
BcgI	CGANNNNNNTGC	4 cut(s)	1349, 1383, 1436, 1470
BciT130I	CCWGG	2 cut(s)	257, 1488
BclI	TGATCA	1 cut(s)	604
BcoDI	GTCTC	2 cut(s)	86, 563
BcuI	ACTAGT	1 cut(s)	488
BfaI	CTAG	8 cut(s)	305, 423, 489, 728, 950, 1130, 1311, 1584
BfmI	CTRYAG	3 cut(s)	1368, 1480, 1511
BfuAI	ACCTGC	1 cut(s)	898
BisI	GCNGC	6 cut(s)	547, 739, 1141, 1317, 1371, 1374
BlpI	GCTNAGC	1 cut(s)	1144
BlsI	GCNGC	6 cut(s)	548, 740, 1142, 1318, 1372, 1375
Bme1390I	CCNGG	2 cut(s)	257, 1488
Bme18I	GGWCC	2 cut(s)	253, 887
BmeT110I	CYCGRG	1 cut(s)	1019
BmgBI	CACGTC	1 cut(s)	17
BmgT120I	GGNCC	2 cut(s)	253, 887
BmiI	GGNNCC	4 cut(s)	147, 448, 1026, 1336
BmrFI	CCNGG	2 cut(s)	257, 1488
Bpu10I	CCTNAGC	1 cut(s)	1339
Bpu1102I	GCTNAGC	1 cut(s)	1144
BpuEI	CTTGAG	1 cut(s)	125
Bsa29I	ATCGAT	1 cut(s)	1456
BsaAI	YACGTR	2 cut(s)	851, 1190
BsaBI	GATNNNNATC	1 cut(s)	942
BsaJI	CCNNGG	5 cut(s)	256, 641, 733, 1043, 1467
BsaWI	WCCGGW	2 cut(s)	898, 1331
BsaXI	ACNNNNNCTCC	4 cut(s)	348, 378, 1227, 1257
Bsc4I	CCNNNNNNNGG	5 cut(s)	155, 353, 632, 1232, 1760
Bse1I	ACTGG	4 cut(s)	326, 429, 746, 1377
Bse3DI	GCAATG	1 cut(s)	861
Bse8I	GATNNNNATC	1 cut(s)	942
BseAI	TCCGGA	2 cut(s)	898, 1331
BseBI	CCWGG	2 cut(s)	257, 1488
BseCI	ATCGAT	1 cut(s)	1456
BseDI	CCNNGG	5 cut(s)	256, 641, 733, 1043, 1467
BseGI	GGATG	5 cut(s)	210, 227, 704, 1106, 1607
BseJI	GATNNNNATC	1 cut(s)	942
BseLI	CCNNNNNNNGG	5 cut(s)	155, 353, 632, 1232, 1760
BseMI	GCAATG	1 cut(s)	861
BseMII	CTCAG	5 cut(s)	81, 535, 670, 1353, 1716
BseNI	ACTGG	4 cut(s)	326, 429, 746, 1377
BseRI	GAGGAG	6 cut(s)	372, 375, 1251, 1254, 1682, 1779
BseSI	GKGCMC	1 cut(s)	1550
BseXI	GCAGC	5 cut(s)	533, 725, 1127, 1360, 1382
Bsh1236I	CGCG	2 cut(s)	557, 1445
BshFI	GGCC	3 cut(s)	169, 201, 1080
BshVI	ATCGAT	1 cut(s)	1456
BsiHKAI	GWGCWC	1 cut(s)	1550
BsiHKCI	CYCGRG	1 cut(s)	1019
BsiSI	CCGG	4 cut(s)	202, 867, 899, 1332
BslFI	GGGAC	2 cut(s)	172, 757
BslI	CCNNNNNNNGG	5 cut(s)	155, 353, 632, 1232, 1760
BsmAI	GTCTC	2 cut(s)	86, 563
BsmFI	GGGAC	2 cut(s)	172, 757
BsnI	GGCC	3 cut(s)	169, 201, 1080
BsoBI	CYCGRG	1 cut(s)	1019
Bsp1286I	GDGCHC	1 cut(s)	1550
Bsp13I	TCCGGA	2 cut(s)	898, 1331
Bsp1720I	GCTNAGC	1 cut(s)	1144
Bsp19I	CCATGG	2 cut(s)	641, 1043
BspACI	CCGC	2 cut(s)	557, 1317
BspANI	GGCC	3 cut(s)	169, 201, 1080
BspCNI	CTCAG	5 cut(s)	82, 534, 669, 1352, 1717
BspDI	ATCGAT	1 cut(s)	1456
BspEI	TCCGGA	2 cut(s)	898, 1331
BspFNI	CGCG	2 cut(s)	557, 1445
BspLI	GGNNCC	4 cut(s)	147, 448, 1026, 1336
BspMAI	CTGCAG	2 cut(s)	1372, 1515
BspMI	ACCTGC	1 cut(s)	898
BspPI	GGATC	4 cut(s)	441, 454, 1329, 1342
BsrDI	GCAATG	1 cut(s)	861
BsrI	ACTGG	4 cut(s)	326, 429, 746, 1377
BssECI	CCNNGG	5 cut(s)	256, 641, 733, 1043, 1467
BssSI	CACGAG	1 cut(s)	1071
BssT1I	CCWWGG	4 cut(s)	641, 733, 1043, 1467
Bst2BI	CACGAG	1 cut(s)	1071
Bst2UI	CCWGG	2 cut(s)	257, 1488
Bst4CI	ACNGT	2 cut(s)	632, 771
Bst6I	CTCTTC	2 cut(s)	699, 1825
BstAPI	GCANNNNNTGC	1 cut(s)	1497
BstBAI	YACGTR	2 cut(s)	851, 1190
BstC8I	GCNNGC	1 cut(s)	975
BstDEI	CTNAG	6 cut(s)	90, 521, 656, 1144, 1339, 1725
BstDSI	CCRYGG	2 cut(s)	641, 1043
BstF5I	GGATG	5 cut(s)	210, 227, 704, 1106, 1607
BstFNI	CGCG	2 cut(s)	557, 1445
BstHHI	GCGC	2 cut(s)	557, 1447
BstMAI	GTCTC	2 cut(s)	86, 563
BstMWI	GCNNNNNNNGC	3 cut(s)	552, 1164, 1497
BstNI	CCWGG	2 cut(s)	257, 1488
BstNSI	RCATGY	1 cut(s)	1291
BstSCI	CCNGG	2 cut(s)	255, 1486
BstSFI	CTRYAG	3 cut(s)	1368, 1480, 1511
BstSLI	GKGCMC	1 cut(s)	1550
BstUI	CGCG	2 cut(s)	557, 1445
BstV1I	GCAGC	5 cut(s)	533, 725, 1127, 1360, 1382
BstX2I	RGATCY	2 cut(s)	446, 1334
BstYI	RGATCY	2 cut(s)	446, 1334
Bsu15I	ATCGAT	1 cut(s)	1456
BsuRI	GGCC	3 cut(s)	169, 201, 1080
BsuTUI	ATCGAT	1 cut(s)	1456
BtgI	CCRYGG	2 cut(s)	641, 1043
BtgZI	GCGATG	1 cut(s)	1515
BtrI	CACGTC	1 cut(s)	17
BtsCI	GGATG	5 cut(s)	210, 227, 704, 1106, 1607
BtsI	GCAGTG	3 cut(s)	54, 1155, 1548
BtsIMutI	CAGTG	6 cut(s)	54, 319, 753, 1155, 1205, 1548
BveI	ACCTGC	1 cut(s)	898
Cac8I	GCNNGC	1 cut(s)	975
CaiI	CAGNNNCTG	1 cut(s)	1598
CfoI	GCGC	2 cut(s)	557, 1447
Cfr13I	GGNCC	2 cut(s)	253, 887
ClaI	ATCGAT	1 cut(s)	1456
Csp6I	GTAC	6 cut(s)	308, 785, 840, 988, 1187, 1674
CviAII	CATG	9 cut(s)	162, 353, 642, 808, 1000, 1044, 1232, 1288, 1760
CviQI	GTAC	6 cut(s)	308, 785, 840, 988, 1187, 1674
DdeI	CTNAG	6 cut(s)	90, 521, 656, 1144, 1339, 1725
EaeI	YGGCCR	3 cut(s)	167, 199, 1078
Eam1104I	CTCTTC	2 cut(s)	699, 1825
EarI	CTCTTC	2 cut(s)	699, 1825
Eco130I	CCWWGG	4 cut(s)	641, 733, 1043, 1467
Eco47I	GGWCC	2 cut(s)	253, 887
Eco57I	CTGAAG	1 cut(s)	65
Eco72I	CACGTG	1 cut(s)	851
Eco88I	CYCGRG	1 cut(s)	1019
EcoO109I	RGGNCCY	1 cut(s)	887
EcoRII	CCWGG	2 cut(s)	255, 1486
EcoT14I	CCWWGG	4 cut(s)	641, 733, 1043, 1467
ErhI	CCWWGG	4 cut(s)	641, 733, 1043, 1467
FaeI	CATG	9 cut(s)	165, 356, 645, 811, 1003, 1047, 1235, 1291, 1763
FaqI	GGGAC	2 cut(s)	172, 757
FatI	CATG	9 cut(s)	161, 352, 641, 807, 999, 1043, 1231, 1287, 1759
FbaI	TGATCA	1 cut(s)	604
FblI	GTMKAC	2 cut(s)	832, 1483
Fnu4HI	GCNGC	6 cut(s)	547, 739, 1141, 1317, 1371, 1374
FokI	GGATG	5 cut(s)	217, 234, 711, 1113, 1614
Fsp4HI	GCNGC	6 cut(s)	547, 739, 1141, 1317, 1371, 1374
FspBI	CTAG	8 cut(s)	305, 423, 489, 728, 950, 1130, 1311, 1584
GlaI	GCGC	2 cut(s)	556, 1446
GluI	GCNGC	6 cut(s)	547, 739, 1141, 1317, 1371, 1374
HaeIII	GGCC	3 cut(s)	169, 201, 1080
HapII	CCGG	4 cut(s)	202, 867, 899, 1332
HhaI	GCGC	2 cut(s)	557, 1447
Hin1II	CATG	9 cut(s)	165, 356, 645, 811, 1003, 1047, 1235, 1291, 1763
Hin6I	GCGC	2 cut(s)	555, 1445
HinP1I	GCGC	2 cut(s)	555, 1445
HindIII	AAGCTT	1 cut(s)	913
HinfI	GANTC	2 cut(s)	128, 1817
HpaII	CCGG	4 cut(s)	202, 867, 899, 1332
HphI	GGTGA	2 cut(s)	268, 1535
Hpy166II	GTNNAC	6 cut(s)	276, 677, 833, 1484, 1548, 1708
Hpy188I	TCNGA	8 cut(s)	33, 71, 502, 524, 659, 1572, 1697, 1816
Hpy188III	TCNNGA	8 cut(s)	89, 444, 566, 899, 968, 1283, 1332, 1827
Hpy8I	GTNNAC	6 cut(s)	276, 677, 833, 1484, 1548, 1708
HpyAV	CCTTC	5 cut(s)	278, 755, 952, 1130, 1157
HpyCH4III	ACNGT	2 cut(s)	632, 771
HpyCH4IV	ACGT	3 cut(s)	16, 850, 1189
HpyCH4V	TGCA	7 cut(s)	236, 269, 854, 999, 1370, 1513, 1548
HpyF10VI	GCNNNNNNNGC	3 cut(s)	552, 1164, 1497
HpyF3I	CTNAG	6 cut(s)	90, 521, 656, 1144, 1339, 1725
HpySE526I	ACGT	3 cut(s)	16, 850, 1189
Hsp92II	CATG	9 cut(s)	165, 356, 645, 811, 1003, 1047, 1235, 1291, 1763
HspAI	GCGC	2 cut(s)	555, 1445
Kpn2I	TCCGGA	2 cut(s)	898, 1331
Ksp22I	TGATCA	1 cut(s)	604
LmnI	GCTCC	4 cut(s)	151, 386, 1274, 1669
Lsp1109I	GCAGC	5 cut(s)	533, 725, 1127, 1360, 1382
MaeI	CTAG	8 cut(s)	305, 423, 489, 728, 950, 1130, 1311, 1584
MaeII	ACGT	3 cut(s)	16, 850, 1189
MaeIII	GTNAC	5 cut(s)	52, 210, 687, 931, 1504
MboII	GAAGA	6 cut(s)	58, 716, 855, 910, 1074, 1812
MfeI	CAATTG	1 cut(s)	171
MflI	RGATCY	2 cut(s)	446, 1334
MhlI	GDGCHC	1 cut(s)	1550
MlsI	TGGCCA	1 cut(s)	169
MluNI	TGGCCA	1 cut(s)	169
MlyI	GAGTC	2 cut(s)	137, 1811
MmeI	TCCRAC	1 cut(s)	458
Mox20I	TGGCCA	1 cut(s)	169
MroI	TCCGGA	2 cut(s)	898, 1331
MscI	TGGCCA	1 cut(s)	169
MseI	TTAA	4 cut(s)	923, 1091, 1410, 1713
MslI	CAYNNNNRTG	2 cut(s)	324, 812
Msp20I	TGGCCA	1 cut(s)	169
MspA1I	CMGCKG	4 cut(s)	575, 977, 1343, 1373
MspI	CCGG	4 cut(s)	202, 867, 899, 1332
MspR9I	CCNGG	2 cut(s)	257, 1488
MunI	CAATTG	1 cut(s)	171
MvaI	CCWGG	2 cut(s)	257, 1488
MvnI	CGCG	2 cut(s)	557, 1445
MwoI	GCNNNNNNNGC	3 cut(s)	552, 1164, 1497
NcoI	CCATGG	2 cut(s)	641, 1043
NlaIII	CATG	9 cut(s)	165, 356, 645, 811, 1003, 1047, 1235, 1291, 1763
NlaIV	GGNNCC	4 cut(s)	147, 448, 1026, 1336
NmuCI	GTSAC	2 cut(s)	52, 1504
NspI	RCATGY	1 cut(s)	1291
PaeR7I	CTCGAG	1 cut(s)	1019
PcsI	WCGNNNNNNNCGW	1 cut(s)	1078
PflMI	CCANNNNNTGG	1 cut(s)	155
PkrI	GCNGC	6 cut(s)	548, 740, 1142, 1318, 1372, 1375
PleI	GAGTC	2 cut(s)	136, 1811
PmaCI	CACGTG	1 cut(s)	851
PmlI	CACGTG	1 cut(s)	851
PpsI	GAGTC	2 cut(s)	136, 1811
Ppu21I	YACGTR	2 cut(s)	851, 1190
PpuMI	RGGWCCY	1 cut(s)	887
PshBI	ATTAAT	1 cut(s)	1713
Psp5II	RGGWCCY	1 cut(s)	887
Psp6I	CCWGG	2 cut(s)	255, 1486
PspCI	CACGTG	1 cut(s)	851
PspGI	CCWGG	2 cut(s)	255, 1486
PspN4I	GGNNCC	4 cut(s)	147, 448, 1026, 1336
PspPI	GGNCC	2 cut(s)	253, 887
PspPPI	RGGWCCY	1 cut(s)	887
PspXI	VCTCGAGB	1 cut(s)	1019
PstI	CTGCAG	2 cut(s)	1372, 1515
PstNI	CAGNNNCTG	1 cut(s)	1598
PsuI	RGATCY	2 cut(s)	446, 1334
PvuII	CAGCTG	4 cut(s)	575, 977, 1343, 1373
RsaI	GTAC	6 cut(s)	309, 786, 841, 989, 1188, 1675
RsaNI	GTAC	6 cut(s)	308, 785, 840, 988, 1187, 1674
RseI	CAYNNNNRTG	2 cut(s)	324, 812
SaqAI	TTAA	4 cut(s)	923, 1091, 1410, 1713
SatI	GCNGC	6 cut(s)	547, 739, 1141, 1317, 1371, 1374
Sau96I	GGNCC	2 cut(s)	253, 887
SchI	GAGTC	2 cut(s)	137, 1811
ScrFI	CCNGG	2 cut(s)	257, 1488
SduI	GDGCHC	1 cut(s)	1550
SfcI	CTRYAG	3 cut(s)	1368, 1480, 1511
Sfr274I	CTCGAG	1 cut(s)	1019
SinI	GGWCC	2 cut(s)	253, 887
SlaI	CTCGAG	1 cut(s)	1019
SmiMI	CAYNNNNRTG	2 cut(s)	324, 812
SmlI	CTYRAG	2 cut(s)	140, 1019
SmoI	CTYRAG	2 cut(s)	140, 1019
SpeI	ACTAGT	1 cut(s)	488
SsiI	CCGC	2 cut(s)	557, 1317
SspMI	CTAG	8 cut(s)	305, 423, 489, 728, 950, 1130, 1311, 1584
StyD4I	CCNGG	2 cut(s)	255, 1486
StyI	CCWWGG	4 cut(s)	641, 733, 1043, 1467
TaaI	ACNGT	2 cut(s)	632, 771
TaiI	ACGT	3 cut(s)	19, 853, 1192
TaqI	TCGA	6 cut(s)	394, 452, 651, 1020, 1456, 1656
TatI	WGTACW	1 cut(s)	987
TauI	GCSGC	1 cut(s)	1319
Tru1I	TTAA	4 cut(s)	923, 1091, 1410, 1713
Tru9I	TTAA	4 cut(s)	923, 1091, 1410, 1713
TscAI	CASTG	6 cut(s)	61, 326, 753, 1155, 1205, 1555
TseFI	GTSAC	2 cut(s)	52, 1504
TseI	GCWGC	5 cut(s)	546, 738, 1140, 1370, 1373
Tsp45I	GTSAC	2 cut(s)	52, 1504
TspRI	CASTG	6 cut(s)	61, 326, 753, 1155, 1205, 1555
Van91I	CCANNNNNTGG	1 cut(s)	155
VneI	GTGCAC	1 cut(s)	1546
VpaK11BI	GGWCC	2 cut(s)	253, 887
VspI	ATTAAT	1 cut(s)	1713
XapI	RAATTY	2 cut(s)	1587, 1806
XceI	RCATGY	1 cut(s)	1291
XhoI	CTCGAG	1 cut(s)	1019
XmiI	GTMKAC	2 cut(s)	832, 1483
XspI	CTAG	8 cut(s)	305, 423, 489, 728, 950, 1130, 1311, 1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.