B3 domain-containing
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 6 - 98 | 1.1e-13 | B3 DNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 63 |
| AcsI | RAATTY | 1 cut(s) | 112 |
| AdeI | CACNNNGTG | 1 cut(s) | 172 |
| AjnI | CCWGG | 3 cut(s) | 82, 193, 335 |
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 194 |
| AoxI | GGCC | 1 cut(s) | 191 |
| ApoI | RAATTY | 1 cut(s) | 112 |
| AspLEI | GCGC | 1 cut(s) | 30 |
| AspS9I | GGNCC | 1 cut(s) | 191 |
| AsuHPI | GGTGA | 2 cut(s) | 158, 248 |
| BciT130I | CCWGG | 3 cut(s) | 84, 195, 337 |
| BfaI | CTAG | 1 cut(s) | 358 |
| BfmI | CTRYAG | 1 cut(s) | 107 |
| BisI | GCNGC | 1 cut(s) | 63 |
| BlsI | GCNGC | 1 cut(s) | 64 |
| Bme1390I | CCNGG | 3 cut(s) | 84, 195, 337 |
| BmgT120I | GGNCC | 1 cut(s) | 191 |
| BmrFI | CCNGG | 3 cut(s) | 84, 195, 337 |
| BmsI | GCATC | 1 cut(s) | 62 |
| BsaJI | CCNNGG | 1 cut(s) | 292 |
| Bse3DI | GCAATG | 1 cut(s) | 103 |
| BseBI | CCWGG | 3 cut(s) | 84, 195, 337 |
| BseDI | CCNNGG | 1 cut(s) | 292 |
| BseMI | GCAATG | 1 cut(s) | 103 |
| BseMII | CTCAG | 1 cut(s) | 152 |
| BseRI | GAGGAG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 193 |
| BsnI | GGCC | 1 cut(s) | 193 |
| Bsp143I | GATC | 1 cut(s) | 163 |
| BspACI | CCGC | 1 cut(s) | 63 |
| BspANI | GGCC | 1 cut(s) | 193 |
| BspCNI | CTCAG | 1 cut(s) | 151 |
| BsrDI | GCAATG | 1 cut(s) | 103 |
| BssECI | CCNNGG | 1 cut(s) | 292 |
| BssMI | GATC | 1 cut(s) | 163 |
| BssT1I | CCWWGG | 1 cut(s) | 292 |
| Bst2UI | CCWGG | 3 cut(s) | 84, 195, 337 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 59, 93 |
| BstC8I | GCNNGC | 1 cut(s) | 177 |
| BstDEI | CTNAG | 2 cut(s) | 138, 348 |
| BstHHI | GCGC | 1 cut(s) | 30 |
| BstKTI | GATC | 1 cut(s) | 166 |
| BstMBI | GATC | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 59, 84, 93 |
| BstNI | CCWGG | 3 cut(s) | 84, 195, 337 |
| BstNSI | RCATGY | 1 cut(s) | 28 |
| BstSCI | CCNGG | 3 cut(s) | 82, 193, 335 |
| BstSFI | CTRYAG | 1 cut(s) | 107 |
| BsuRI | GGCC | 1 cut(s) | 193 |
| BtsIMutI | CAGTG | 2 cut(s) | 146, 157 |
| Cac8I | GCNNGC | 1 cut(s) | 177 |
| CaiI | CAGNNNCTG | 1 cut(s) | 194 |
| CfoI | GCGC | 1 cut(s) | 30 |
| Cfr13I | GGNCC | 1 cut(s) | 191 |
| CviAII | CATG | 1 cut(s) | 25 |
| CviJI | RGCY | 3 cut(s) | 17, 193, 335 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 193, 335 |
| DdeI | CTNAG | 2 cut(s) | 138, 348 |
| DpnI | GATC | 1 cut(s) | 165 |
| DpnII | GATC | 1 cut(s) | 163 |
| DraIII | CACNNNGTG | 1 cut(s) | 172 |
| Eco130I | CCWWGG | 1 cut(s) | 292 |
| Eco32I | GATATC | 1 cut(s) | 241 |
| EcoO109I | RGGNCCY | 1 cut(s) | 191 |
| EcoRI | GAATTC | 1 cut(s) | 112 |
| EcoRII | CCWGG | 3 cut(s) | 82, 193, 335 |
| EcoRV | GATATC | 1 cut(s) | 241 |
| EcoT14I | CCWWGG | 1 cut(s) | 292 |
| ErhI | CCWWGG | 1 cut(s) | 292 |
| FaeI | CATG | 1 cut(s) | 28 |
| FaiI | YATR | 7 cut(s) | 11, 22, 26, 45, 47, 76, 287 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 168, 200 |
| FatI | CATG | 1 cut(s) | 24 |
| Fnu4HI | GCNGC | 1 cut(s) | 63 |
| Fsp4HI | GCNGC | 1 cut(s) | 63 |
| FspBI | CTAG | 1 cut(s) | 358 |
| GlaI | GCGC | 1 cut(s) | 29 |
| GluI | GCNGC | 1 cut(s) | 63 |
| HaeIII | GGCC | 1 cut(s) | 193 |
| HhaI | GCGC | 1 cut(s) | 30 |
| Hin1II | CATG | 1 cut(s) | 28 |
| Hin6I | GCGC | 1 cut(s) | 28 |
| HinP1I | GCGC | 1 cut(s) | 28 |
| HphI | GGTGA | 2 cut(s) | 158, 248 |
| Hpy166II | GTNNAC | 2 cut(s) | 155, 272 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| Hpy8I | GTNNAC | 2 cut(s) | 155, 272 |
| HpyCH4IV | ACGT | 1 cut(s) | 268 |
| HpyCH4V | TGCA | 4 cut(s) | 53, 78, 96, 175 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 59, 84, 93 |
| HpyF3I | CTNAG | 2 cut(s) | 138, 348 |
| HpySE526I | ACGT | 1 cut(s) | 268 |
| Hsp92II | CATG | 1 cut(s) | 28 |
| HspAI | GCGC | 1 cut(s) | 28 |
| Kzo9I | GATC | 1 cut(s) | 163 |
| LpnPI | CCDG | 9 cut(s) | 69, 96, 174, 180, 200, 207, 212, 322, 349 |
| LweI | GCATC | 1 cut(s) | 62 |
| MaeI | CTAG | 1 cut(s) | 358 |
| MaeII | ACGT | 1 cut(s) | 268 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MalI | GATC | 1 cut(s) | 165 |
| MboI | GATC | 1 cut(s) | 163 |
| MboII | GAAGA | 1 cut(s) | 316 |
| MluCI | AATT | 1 cut(s) | 112 |
| MmeI | TCCRAC | 1 cut(s) | 179 |
| MnlI | CCTC | 3 cut(s) | 41, 112, 316 |
| MseI | TTAA | 2 cut(s) | 210, 354 |
| MspA1I | CMGCKG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 3 cut(s) | 84, 195, 337 |
| MvaI | CCWGG | 3 cut(s) | 84, 195, 337 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 59, 84, 93 |
| NdeII | GATC | 1 cut(s) | 163 |
| NlaIII | CATG | 1 cut(s) | 28 |
| NmuCI | GTSAC | 1 cut(s) | 100 |
| NspI | RCATGY | 1 cut(s) | 28 |
| PkrI | GCNGC | 1 cut(s) | 64 |
| Psp6I | CCWGG | 3 cut(s) | 82, 193, 335 |
| PspGI | CCWGG | 3 cut(s) | 82, 193, 335 |
| PspPI | GGNCC | 1 cut(s) | 191 |
| PstNI | CAGNNNCTG | 1 cut(s) | 194 |
| SaqAI | TTAA | 2 cut(s) | 210, 354 |
| SatI | GCNGC | 1 cut(s) | 63 |
| Sau3AI | GATC | 1 cut(s) | 163 |
| Sau96I | GGNCC | 1 cut(s) | 191 |
| ScrFI | CCNGG | 3 cut(s) | 84, 195, 337 |
| SetI | ASST | 4 cut(s) | 19, 238, 271, 298 |
| SfaNI | GCATC | 1 cut(s) | 62 |
| SfcI | CTRYAG | 1 cut(s) | 107 |
| Sse9I | AATT | 1 cut(s) | 112 |
| SsiI | CCGC | 1 cut(s) | 63 |
| SspMI | CTAG | 1 cut(s) | 358 |
| StyD4I | CCNGG | 3 cut(s) | 82, 193, 335 |
| StyI | CCWWGG | 1 cut(s) | 292 |
| TaiI | ACGT | 1 cut(s) | 271 |
| TasI | AATT | 1 cut(s) | 112 |
| TauI | GCSGC | 1 cut(s) | 65 |
| Tru1I | TTAA | 2 cut(s) | 210, 354 |
| Tru9I | TTAA | 2 cut(s) | 210, 354 |
| TscAI | CASTG | 2 cut(s) | 146, 157 |
| TseFI | GTSAC | 1 cut(s) | 100 |
| Tsp45I | GTSAC | 1 cut(s) | 100 |
| TspDTI | ATGAA | 2 cut(s) | 279, 345 |
| TspRI | CASTG | 2 cut(s) | 146, 157 |
| XapI | RAATTY | 1 cut(s) | 112 |
| XceI | RCATGY | 1 cut(s) | 28 |
| XspI | CTAG | 1 cut(s) | 358 |