Rmu_sc0000146.1_g000015

threonine-type endopeptidase activity

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000146.1
Physical Location & Seq
Forward (+)
47109 .. 47627
519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000146.1_g000015.1.cds

Sequence Viewer

Length: 315 bp
atgtatgagtatctgaatagtctggatgacaaggatatagtatgtggagctatcatcgttggatgggatgctaattcgggtcctgaatttcatcgcgtttttataaaaaacaaaaaggttgtgaaacaaagaggttctatgcctttagcgctaggaagtggtcaaggtcatgctcttcgtatgcttcaaagtatcaactacaatatgtccactgatgatgctgctgatttggcgtttaaaactttatttaatgcaacctactatgataagcatagtggtggagaactgaaaggtaattacctatcttctgtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000502 GO:0001775 GO:0002376 GO:0002520 GO:0002521 GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005839 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009987 GO:0010033 GO:0010498 GO:0010499 GO:0012505 GO:0016020 GO:0016043 GO:0016579 GO:0016787 GO:0019221 GO:0019222 GO:0019538 GO:0019774 GO:0019882 GO:0019941 GO:0022607 GO:0023052 GO:0030097 GO:0030098 GO:0030154 GO:0030162 GO:0030163 GO:0030217 GO:0031597 GO:0031974 GO:0031981 GO:0031984 GO:0032501 GO:0032502 GO:0032991 GO:0034097 GO:0034340 GO:0034515 GO:0034622 GO:0036037 GO:0036211 GO:0042110 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043248 GO:0043374 GO:0043412 GO:0043632 GO:0043687 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045087 GO:0045321 GO:0045444 GO:0046631 GO:0046632 GO:0046649 GO:0048513 GO:0048534 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051336 GO:0051603 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060337 GO:0065003 GO:0065007 GO:0065009 GO:0070011 GO:0070013 GO:0070646 GO:0070647 GO:0070887 GO:0071310 GO:0071345 GO:0071357 GO:0071704 GO:0071840 GO:0080090 GO:0080129 GO:0098827 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369 GO:1990111
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.51

Weight (kDa)

6.81

Isoelectric Point (pI)

29.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 104
AccII CGCG 1 cut(s) 96
AcsI RAATTY 1 cut(s) 86
AfeI AGCGCT 1 cut(s) 150
AgsI TTSAA 1 cut(s) 188
AluBI AGCT 1 cut(s) 50
AluI AGCT 1 cut(s) 50
Aor51HI AGCGCT 1 cut(s) 150
ApeKI GCWGC 1 cut(s) 221
ApoI RAATTY 1 cut(s) 86
AspLEI GCGC 1 cut(s) 151
AspS9I GGNCC 1 cut(s) 80
AvaII GGWCC 1 cut(s) 80
BbvI GCAGC 1 cut(s) 208
BccI CCATC 1 cut(s) 57
BfaI CTAG 1 cut(s) 152
BfoI RGCGCY 1 cut(s) 152
BisI GCNGC 1 cut(s) 222
BlsI GCNGC 1 cut(s) 223
Bme18I GGWCC 1 cut(s) 80
BmgT120I GGNCC 1 cut(s) 80
BmiI GGNNCC 1 cut(s) 81
BmsI GCATC 2 cut(s) 58, 208
BseGI GGATG 3 cut(s) 31, 68, 73
BseXI GCAGC 1 cut(s) 208
Bsh1236I CGCG 1 cut(s) 96
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 1 cut(s) 81
BspQI GCTCTTC 1 cut(s) 180
Bst6I CTCTTC 1 cut(s) 180
BstF5I GGATG 3 cut(s) 31, 68, 73
BstFNI CGCG 1 cut(s) 96
BstH2I RGCGCY 1 cut(s) 152
BstHHI GCGC 1 cut(s) 151
BstMWI GCNNNNNNNGC 2 cut(s) 148, 230
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 1 cut(s) 208
BtgZI GCGATG 1 cut(s) 77
BtsCI GGATG 3 cut(s) 31, 68, 73
BtsIMutI CAGTG 1 cut(s) 210
CfoI GCGC 1 cut(s) 151
Cfr13I GGNCC 1 cut(s) 80
CviAII CATG 1 cut(s) 170
CviJI RGCY 1 cut(s) 50
CviKI_1 RGCY 1 cut(s) 50
DraI TTTAAA 1 cut(s) 238
Eam1104I CTCTTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 180
Eco47I GGWCC 1 cut(s) 80
Eco47III AGCGCT 1 cut(s) 150
EcoO109I RGGNCCY 1 cut(s) 80
FaeI CATG 1 cut(s) 173
FatI CATG 1 cut(s) 169
Fnu4HI GCNGC 1 cut(s) 222
FokI GGATG 3 cut(s) 38, 75, 80
Fsp4HI GCNGC 1 cut(s) 222
FspBI CTAG 1 cut(s) 152
GlaI GCGC 1 cut(s) 150
GluI GCNGC 1 cut(s) 222
HaeII RGCGCY 1 cut(s) 152
HhaI GCGC 1 cut(s) 151
Hin1II CATG 1 cut(s) 173
Hin6I GCGC 1 cut(s) 149
HinP1I GCGC 1 cut(s) 149
Hpy166II GTNNAC 1 cut(s) 210
Hpy188I TCNGA 1 cut(s) 15
Hpy188III TCNNGA 2 cut(s) 23, 83
Hpy8I GTNNAC 1 cut(s) 210
HpyCH4V TGCA 1 cut(s) 254
HpyF10VI GCNNNNNNNGC 2 cut(s) 148, 230
Hsp92II CATG 1 cut(s) 173
HspAI GCGC 1 cut(s) 149
LguI GCTCTTC 1 cut(s) 180
LmnI GCTCC 1 cut(s) 47
LpnPI CCDG 2 cut(s) 8, 96
Lsp1109I GCAGC 1 cut(s) 208
LweI GCATC 2 cut(s) 58, 208
MaeI CTAG 1 cut(s) 152
MboII GAAGA 2 cut(s) 167, 297
MluCI AATT 3 cut(s) 73, 86, 295
MmeI TCCRAC 1 cut(s) 40
MnlI CCTC 1 cut(s) 125
MseI TTAA 3 cut(s) 237, 249, 313
MslI CAYNNNNRTG 1 cut(s) 276
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 2 cut(s) 148, 230
NlaIII CATG 1 cut(s) 173
NlaIV GGNNCC 1 cut(s) 81
PciSI GCTCTTC 1 cut(s) 180
PkrI GCNGC 1 cut(s) 223
PpuMI RGGWCCY 1 cut(s) 80
PsiI TTATAA 1 cut(s) 104
Psp5II RGGWCCY 1 cut(s) 80
PspN4I GGNNCC 1 cut(s) 81
PspPI GGNCC 1 cut(s) 80
PspPPI RGGWCCY 1 cut(s) 80
RseI CAYNNNNRTG 1 cut(s) 276
SapI GCTCTTC 1 cut(s) 180
SaqAI TTAA 3 cut(s) 237, 249, 313
SatI GCNGC 1 cut(s) 222
Sau96I GGNCC 1 cut(s) 80
SetI ASST 7 cut(s) 52, 120, 136, 169, 260, 295, 303
SfaNI GCATC 2 cut(s) 58, 208
SgeI CNNG 8 cut(s) 35, 43, 90, 95, 107, 164, 176, 182
SinI GGWCC 1 cut(s) 80
SmiMI CAYNNNNRTG 1 cut(s) 276
Sse9I AATT 3 cut(s) 73, 86, 295
SspMI CTAG 1 cut(s) 152
TasI AATT 3 cut(s) 73, 86, 295
Tru1I TTAA 3 cut(s) 237, 249, 313
Tru9I TTAA 3 cut(s) 237, 249, 313
TscAI CASTG 1 cut(s) 217
TseI GCWGC 1 cut(s) 221
TspDTI ATGAA 1 cut(s) 80
TspRI CASTG 1 cut(s) 217
VpaK11BI GGWCC 1 cut(s) 80
XapI RAATTY 1 cut(s) 86
XspI CTAG 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.