Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00470

Orthogroup ID

OG0000613

Physical Location & Seq

Genomic Coordinates Reverse (-)

2325 .. 5886

Gene Structure 3562 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G010900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGGTTGGAAAACATTCCTCTATTGCAGGGGCATGTCTTTCTGGCTCAGATGATGTAGATTTGAACCATCCCAATCATAAAGTTTCTGAGATGGTGCCGTGCAAAGGGACGACAAATTTTGGCTTCGTATACAGCGGAGGGGTAGTGTTGGGCGGGGACAGTAGAACCAGCTTAGACTTTAAAACGTTTGACAAGCAACTAAATATCTATGTTCAATACGAGTCCATAGTTGAAGATGACTGCACAAAAATCAGATACATGCGTGGTAACTATCGAGGAAGGATTTATTGCACACTCTGTGGTTTGGTTGAAAAATGGTTCGGCTTGTATCACTACCTGAATACTAAGGCAAATGTGACGTCAATTGAAGATGCGATACACAAAGCTTCCTCTTATCTAAGCAAATACGTGGCGAGAAATACAAGGCGATTGGAACACATGAAGTTCATGGGAACACCGGAAGCGTTCGGAATGTTGATCGGGGGGTATACAGTAGCCGAGGGTCACCGACTTGGCGTTGTTACTCTCGATCATAAAACAGTTCATTGGAGGCTAATAGACAGTGCTGAGACACTCGGGTCGGGGGCGGAATTTGCGGATGATGTTCTAAAGATCTCAACAAATGAGGAGCGGGAGGCATATGGAGAAGGAAAGATAATGACCAGAGAGCAGGCATTTGATTTGGGTTCTCGAACTTTATCTTATGCAGCGGCTCGTGATCCGTACTCGGGCGGAAATTTTCACAGGGTTCATATACAAGGATTTGATGTTGAGCACCGCCACTCCAATTCTTTGGGTTCATATGTGGAACACTTTGGACTCATCGACAGCTTCGGAGACATCGATAGGAGATCTCTTTTTCTACTGTATGTCTGGCCTTATCCCTGTTGGACGGTTGCAGATATGGAAAACTTGCTTGGAACTATTTGGCCTAATGGTGAGGTGGAATGGGATGATCTTCAAGCGTATCATTTTTTGGCAAGAAAGCAGTCGGATATCCACATTCATCGCCTTCTCTTCAAAGATGAGCAGAGAGCCCACAAAGCCTACGCCGACGTCAACCAGCTGGCAGATCTTGGGCCTACTAACAATTTAGAAGACAAAGTTGCTCTTGGTTTTGTTCTACGATCGGGTACTCTTCAGTATCCGGTTTATGTTGGACCCAGCACCATCCAGTTTCTTACACACATGCTCAACATGCCTGGGACACGTAGCTTGCACTACCCGAATGTTCCACCTGTTCCAATTGGACCAATTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005839 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0010499 GO:0012505 GO:0016020 GO:0016043 GO:0016787 GO:0019538 GO:0019774 GO:0019941 GO:0022607 GO:0030163 GO:0031597 GO:0031984 GO:0032991 GO:0034515 GO:0034622 GO:0042175 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043248 GO:0043632 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0051603 GO:0065003 GO:0070011 GO:0071704 GO:0071840 GO:0080129 GO:0098827 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

Proteasome

Protein Analysis

420

Amino Acids

47.27

Weight (kDa)

6.2

Isoelectric Point (pI)

35.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Proteasome	PF00227	35 - 251	1.4e-08	Proteasome subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13060 AT1G13060 AT1G13060 AT3G26340
fragaria_vesca	FvH4_1g01201 FvH4_4g24020 FvH4_6g30500
malus_domestica	MD10G1030600.v1.1 MD16G1116800.v1.1
prunus_persica	Prupe.1G229300_v2.0.a1 Prupe.1G229300_v2.0.a1 Prupe.1G229300_v2.0.a1
pyrus_communis	pycom10g01980 pycom13g10110
rosa_chinensis	RchiOBHm_Chr4g0430701 RchiOBHm_Chr5g0003071
rosa_laevigata	RLG00000006954 RLG00000031090 RLG00000031094 RLG00000031099 RLG00000031107 RLG00000031108 RLG00000031111 RLG00000031116 RLG00000032188
rosa_multiflora	Rmu_sc0000131.1_g000009 Rmu_sc0000146.1_g000015 Rmu_sc0002209.1_g000027
rosa_roxburghii	Rroxscaffold_1G00061170 Rroxscaffold_1G00061240 Rroxscaffold_1G00061300 Rroxscaffold_1G00072510 Rroxscaffold_1G00072750 Rroxscaffold_1G00072760 Rroxscaffold_5G00372440 Rroxscaffold_6G00429800 Rroxscaffold_6G00429810 Rroxscaffold_6G00429820 Rroxscaffold_6G00429850
rosa_rugosa	Rorug04G0245300 Rorug04G0402100 Rorug04G0402100 Rorug04G0402100 Rorug05G0025600 Rorug05G0026200
rosa_samantha	Rh3BG233200 Rh3DG047000 Rh3DG047300 Rh3DG047400 Rh3DG047800 Rh4AG053100 Rh4AG227500 Rh4BG230300 Rh4BG309300 Rh4CG242400 Rh4DG160600 Rh4DG225800 Rh5AG024300 Rh5AG024400 Rh5AG024700 Rh5AG027100 Rh5AG119900 Rh5BG118400 Rh5CG027100 Rh5CG027300 Rh5CG027700 Rh5CG128900 Rh5DG026900 Rh5DG027000 Rh5DG027700 Rh5DG028000 Rh5DG028500
rosa_wichuraiana	Rw0G010900 Rw3G003590 Rw4G026180 Rw5G002310 Rw5G002480 Rw5G002600 Rw5G010340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	577
AatII	GACGTC	2 cut(s)	362, 1059
AccB1I	GGYRCC	1 cut(s)	94
AccBSI	CCGCTC	1 cut(s)	631
AccI	GTMKAC	2 cut(s)	129, 488
AciI	CCGC	8 cut(s)	135, 153, 587, 596, 631, 710, 732, 778
AclI	AACGTT	1 cut(s)	185
AclWI	GGATC	1 cut(s)	713
AcsI	RAATTY	3 cut(s)	115, 590, 736
AcuI	CTGAAG	1 cut(s)	1124
AcyI	GRCGYC	2 cut(s)	359, 1056
AdeI	CACNNNGTG	1 cut(s)	299
AfaI	GTAC	2 cut(s)	725, 1135
AfiI	CCNNNNNNNGG	2 cut(s)	104, 728
AflIII	ACRYGT	1 cut(s)	1208
AgsI	TTSAA	7 cut(s)	64, 215, 233, 311, 368, 962, 1021
AjnI	CCWGG	1 cut(s)	1201
AjuI	GAANNNNNNNTTGG	2 cut(s)	900, 932
AluBI	AGCT	5 cut(s)	171, 386, 831, 1066, 1215
AluI	AGCT	5 cut(s)	171, 386, 831, 1066, 1215
Alw21I	GWGCWC	1 cut(s)	777
Alw26I	GTCTC	2 cut(s)	563, 831
AlwI	GGATC	1 cut(s)	713
Ama87I	CYCGRG	2 cut(s)	575, 727
AoxI	GGCC	3 cut(s)	875, 929, 1079
ApeKI	GCWGC	1 cut(s)	707
ApoI	RAATTY	3 cut(s)	115, 590, 736
ArsI	GACNNNNNNTTYG	2 cut(s)	344, 376
Asp700I	GAANNNNTTC	1 cut(s)	13
AspS9I	GGNCC	3 cut(s)	1079, 1160, 1250
AsuHPI	GGTGA	2 cut(s)	497, 950
AvaI	CYCGRG	2 cut(s)	575, 727
AvaII	GGWCC	2 cut(s)	1160, 1250
BaeI	ACNNNNGTAYC	2 cut(s)	247, 280
BanI	GGYRCC	1 cut(s)	94
BanII	GRGCYC	1 cut(s)	1039
BarI	GAAGNNNNNNTAC	2 cut(s)	360, 392
BauI	CACGAG	1 cut(s)	714
BbsI	GAAGAC	1 cut(s)	1104
Bbv12I	GWGCWC	1 cut(s)	777
BbvI	GCAGC	1 cut(s)	719
BccI	CCATC	3 cut(s)	75, 85, 1178
BceAI	ACGGC	1 cut(s)	82
BciT130I	CCWGG	1 cut(s)	1203
BciVI	GTATCC	1 cut(s)	1155
BcoDI	GTCTC	2 cut(s)	563, 831
BfuI	GTATCC	1 cut(s)	1155
BglII	AGATCT	3 cut(s)	612, 851, 1072
BisI	GCNGC	2 cut(s)	708, 711
BlsI	GCNGC	2 cut(s)	709, 712
Bme1390I	CCNGG	1 cut(s)	1203
Bme18I	GGWCC	2 cut(s)	1160, 1250
BmeT110I	CYCGRG	2 cut(s)	575, 727
BmgT120I	GGNCC	3 cut(s)	1079, 1160, 1250
BmiI	GGNNCC	2 cut(s)	96, 1162
BmrFI	CCNGG	1 cut(s)	1203
BmsI	GCATC	1 cut(s)	361
BpiI	GAAGAC	1 cut(s)	1104
Bsa29I	ATCGAT	1 cut(s)	843
BsaAI	YACGTR	2 cut(s)	409, 1211
BsaHI	GRCGYC	2 cut(s)	359, 1056
BsaJI	CCNNGG	2 cut(s)	498, 1202
BsaWI	WCCGGW	2 cut(s)	457, 1147
BsaXI	ACNNNNNCTCC	4 cut(s)	129, 159, 767, 797
Bsc4I	CCNNNNNNNGG	2 cut(s)	104, 728
Bse1I	ACTGG	1 cut(s)	1174
BseBI	CCWGG	1 cut(s)	1203
BseCI	ATCGAT	1 cut(s)	843
BseDI	CCNNGG	2 cut(s)	498, 1202
BseGI	GGATG	4 cut(s)	67, 604, 958, 1170
BseLI	CCNNNNNNNGG	2 cut(s)	104, 728
BseMII	CTCAG	3 cut(s)	60, 78, 558
BseNI	ACTGG	1 cut(s)	1174
BseRI	GAGGAG	1 cut(s)	641
BseXI	GCAGC	1 cut(s)	719
BseYI	CCCAGC	1 cut(s)	1163
BsgI	GTGCAG	1 cut(s)	226
Bsh1285I	CGRYCG	1 cut(s)	1130
BshFI	GGCC	3 cut(s)	877, 931, 1081
BshNI	GGYRCC	1 cut(s)	94
BshVI	ATCGAT	1 cut(s)	843
BsiEI	CGRYCG	1 cut(s)	1130
BsiHKAI	GWGCWC	1 cut(s)	777
BsiHKCI	CYCGRG	2 cut(s)	575, 727
BsiSI	CCGG	2 cut(s)	458, 1148
BslFI	GGGAC	3 cut(s)	121, 170, 1219
BslI	CCNNNNNNNGG	2 cut(s)	104, 728
BsmAI	GTCTC	2 cut(s)	563, 831
BsmFI	GGGAC	3 cut(s)	121, 170, 1219
BsnI	GGCC	3 cut(s)	877, 931, 1081
BsoBI	CYCGRG	2 cut(s)	575, 727
Bsp1286I	GDGCHC	2 cut(s)	777, 1039
Bsp143I	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
BspACI	CCGC	8 cut(s)	135, 153, 587, 596, 631, 710, 732, 778
BspANI	GGCC	3 cut(s)	877, 931, 1081
BspCNI	CTCAG	3 cut(s)	59, 79, 559
BspDI	ATCGAT	1 cut(s)	843
BspLI	GGNNCC	2 cut(s)	96, 1162
BspPI	GGATC	1 cut(s)	713
BspT107I	GGYRCC	1 cut(s)	94
BsrBI	CCGCTC	1 cut(s)	631
BsrI	ACTGG	1 cut(s)	1174
BssECI	CCNNGG	2 cut(s)	498, 1202
BssMI	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
BssNAI	GTATAC	2 cut(s)	130, 489
BssNI	GRCGYC	2 cut(s)	359, 1056
BssSI	CACGAG	1 cut(s)	714
Bst1107I	GTATAC	2 cut(s)	130, 489
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	1 cut(s)	1203
Bst4CI	ACNGT	6 cut(s)	161, 493, 541, 563, 867, 895
Bst6I	CTCTTC	2 cut(s)	1022, 1143
BstACI	GRCGYC	2 cut(s)	359, 1056
BstBAI	YACGTR	2 cut(s)	409, 1211
BstC8I	GCNNGC	3 cut(s)	672, 1068, 1217
BstDEI	CTNAG	6 cut(s)	46, 87, 172, 345, 398, 567
BstEII	GGTNACC	1 cut(s)	503
BstF5I	GGATG	4 cut(s)	67, 604, 958, 1170
BstKTI	GATC	8 cut(s)	480, 532, 615, 721, 854, 958, 1075, 1130
BstMAI	GTCTC	2 cut(s)	563, 831
BstMBI	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
BstMCI	CGRYCG	1 cut(s)	1130
BstMWI	GCNNNNNNNGC	3 cut(s)	593, 1043, 1198
BstNI	CCWGG	1 cut(s)	1203
BstNSI	RCATGY	4 cut(s)	36, 262, 1192, 1201
BstPI	GGTNACC	1 cut(s)	503
BstSCI	CCNGG	1 cut(s)	1201
BstV1I	GCAGC	1 cut(s)	719
BstV2I	GAAGAC	1 cut(s)	1104
BstX2I	RGATCY	3 cut(s)	612, 851, 1072
BstXI	CCANNNNNNTGG	1 cut(s)	793
BstYI	RGATCY	3 cut(s)	612, 851, 1072
BstZ17I	GTATAC	2 cut(s)	130, 489
Bsu15I	ATCGAT	1 cut(s)	843
BsuI	GTATCC	1 cut(s)	1155
BsuRI	GGCC	3 cut(s)	877, 931, 1081
BsuTUI	ATCGAT	1 cut(s)	843
BtgZI	GCGATG	1 cut(s)	992
BtsCI	GGATG	4 cut(s)	67, 604, 958, 1170
BtsIMutI	CAGTG	1 cut(s)	568
Cac8I	GCNNGC	3 cut(s)	672, 1068, 1217
Cfr13I	GGNCC	3 cut(s)	1079, 1160, 1250
ClaI	ATCGAT	1 cut(s)	843
Csp6I	GTAC	2 cut(s)	724, 1134
CviAII	CATG	6 cut(s)	33, 259, 439, 448, 1189, 1198
CviQI	GTAC	2 cut(s)	724, 1134
DdeI	CTNAG	6 cut(s)	46, 87, 172, 345, 398, 567
DpnI	GATC	8 cut(s)	479, 531, 614, 720, 853, 957, 1074, 1129
DpnII	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
DraI	TTTAAA	1 cut(s)	181
DraIII	CACNNNGTG	1 cut(s)	299
DrdI	GACNNNNNNGTC	1 cut(s)	577
DseDI	GACNNNNNNGTC	1 cut(s)	577
Eam1104I	CTCTTC	2 cut(s)	1022, 1143
EarI	CTCTTC	2 cut(s)	1022, 1143
EciI	GGCGGA	2 cut(s)	602, 747
Eco24I	GRGCYC	1 cut(s)	1039
Eco32I	GATATC	1 cut(s)	997
Eco47I	GGWCC	2 cut(s)	1160, 1250
Eco57I	CTGAAG	1 cut(s)	1124
Eco88I	CYCGRG	2 cut(s)	575, 727
Eco91I	GGTNACC	1 cut(s)	503
EcoO65I	GGTNACC	1 cut(s)	503
EcoRII	CCWGG	1 cut(s)	1201
EcoRV	GATATC	1 cut(s)	997
EcoT38I	GRGCYC	1 cut(s)	1039
FaeI	CATG	6 cut(s)	36, 262, 442, 451, 1192, 1201
FalI	AAGNNNNNCTT	2 cut(s)	1095, 1127
FaqI	GGGAC	3 cut(s)	121, 170, 1219
FatI	CATG	6 cut(s)	32, 258, 438, 447, 1188, 1197
FauI	CCCGC	2 cut(s)	146, 624
FauNDI	CATATG	2 cut(s)	640, 802
FblI	GTMKAC	2 cut(s)	129, 488
Fnu4HI	GCNGC	2 cut(s)	708, 711
FokI	GGATG	4 cut(s)	54, 611, 965, 1157
FriOI	GRGCYC	1 cut(s)	1039
Fsp4HI	GCNGC	2 cut(s)	708, 711
GluI	GCNGC	2 cut(s)	708, 711
GsaI	CCCAGC	1 cut(s)	1167
HaeIII	GGCC	3 cut(s)	877, 931, 1081
HapII	CCGG	2 cut(s)	458, 1148
Hin1I	GRCGYC	2 cut(s)	359, 1056
Hin1II	CATG	6 cut(s)	36, 262, 442, 451, 1192, 1201
HincII	GTYRAC	1 cut(s)	1060
HindII	GTYRAC	1 cut(s)	1060
HindIII	AAGCTT	1 cut(s)	384
HinfI	GANTC	2 cut(s)	221, 819
HpaII	CCGG	2 cut(s)	458, 1148
HphI	GGTGA	2 cut(s)	497, 950
Hpy166II	GTNNAC	3 cut(s)	130, 489, 1060
Hpy188I	TCNGA	6 cut(s)	49, 88, 254, 470, 836, 994
Hpy188III	TCNNGA	3 cut(s)	527, 690, 716
Hpy8I	GTNNAC	3 cut(s)	130, 489, 1060
Hpy99I	CGWCG	1 cut(s)	1058
HpyAV	CCTTC	3 cut(s)	273, 641, 1022
HpyCH4III	ACNGT	6 cut(s)	161, 493, 541, 563, 867, 895
HpyCH4IV	ACGT	5 cut(s)	185, 359, 408, 1056, 1210
HpyCH4V	TGCA	7 cut(s)	26, 102, 243, 291, 707, 899, 1219
HpyF10VI	GCNNNNNNNGC	3 cut(s)	593, 1043, 1198
HpyF3I	CTNAG	6 cut(s)	46, 87, 172, 345, 398, 567
HpySE526I	ACGT	5 cut(s)	185, 359, 408, 1056, 1210
Hsp92I	GRCGYC	2 cut(s)	359, 1056
Hsp92II	CATG	6 cut(s)	36, 262, 442, 451, 1192, 1201
Kzo9I	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
LmnI	GCTCC	1 cut(s)	628
Lsp1109I	GCAGC	1 cut(s)	719
LweI	GCATC	1 cut(s)	361
MaeII	ACGT	5 cut(s)	185, 359, 408, 1056, 1210
MaeIII	GTNAC	4 cut(s)	266, 355, 503, 520
MalI	GATC	8 cut(s)	479, 531, 614, 720, 853, 957, 1074, 1129
MbiI	CCGCTC	1 cut(s)	631
MboI	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
MboII	GAAGA	6 cut(s)	245, 380, 950, 1009, 1109, 1130
MfeI	CAATTG	2 cut(s)	363, 1245
MflI	RGATCY	3 cut(s)	612, 851, 1072
MhlI	GDGCHC	2 cut(s)	777, 1039
MluCI	AATT	8 cut(s)	115, 363, 590, 736, 787, 1090, 1245, 1254
MlyI	GAGTC	2 cut(s)	230, 813
MmeI	TCCRAC	3 cut(s)	869, 972, 1138
MnlI	CCTC	9 cut(s)	28, 131, 269, 400, 493, 543, 619, 628, 934
MroXI	GAANNNNTTC	1 cut(s)	13
MseI	TTAA	1 cut(s)	180
MspA1I	CMGCKG	3 cut(s)	135, 710, 1066
MspI	CCGG	2 cut(s)	458, 1148
MspR9I	CCNGG	1 cut(s)	1203
MunI	CAATTG	2 cut(s)	363, 1245
MvaI	CCWGG	1 cut(s)	1203
MwoI	GCNNNNNNNGC	3 cut(s)	593, 1043, 1198
NdeI	CATATG	2 cut(s)	640, 802
NdeII	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
NlaIII	CATG	6 cut(s)	36, 262, 442, 451, 1192, 1201
NlaIV	GGNNCC	2 cut(s)	96, 1162
NmeAIII	GCCGAG	1 cut(s)	523
NmuCI	GTSAC	2 cut(s)	355, 503
NspI	RCATGY	4 cut(s)	36, 262, 1192, 1201
PcsI	WCGNNNNNNNCGW	1 cut(s)	840
PdmI	GAANNNNTTC	1 cut(s)	13
PkrI	GCNGC	2 cut(s)	709, 712
Ple19I	CGATCG	1 cut(s)	1130
PleI	GAGTC	2 cut(s)	229, 813
PpsI	GAGTC	2 cut(s)	229, 813
Ppu21I	YACGTR	2 cut(s)	409, 1211
Psp1406I	AACGTT	1 cut(s)	185
Psp6I	CCWGG	1 cut(s)	1201
PspEI	GGTNACC	1 cut(s)	503
PspFI	CCCAGC	1 cut(s)	1163
PspGI	CCWGG	1 cut(s)	1201
PspN4I	GGNNCC	2 cut(s)	96, 1162
PspPI	GGNCC	3 cut(s)	1079, 1160, 1250
PsuI	RGATCY	3 cut(s)	612, 851, 1072
PvuI	CGATCG	1 cut(s)	1130
PvuII	CAGCTG	1 cut(s)	1066
RsaI	GTAC	2 cut(s)	725, 1135
RsaNI	GTAC	2 cut(s)	724, 1134
SaqAI	TTAA	1 cut(s)	180
SatI	GCNGC	2 cut(s)	708, 711
Sau3AI	GATC	8 cut(s)	477, 529, 612, 718, 851, 955, 1072, 1127
Sau96I	GGNCC	3 cut(s)	1079, 1160, 1250
SchI	GAGTC	2 cut(s)	230, 813
ScrFI	CCNGG	1 cut(s)	1203
SduI	GDGCHC	2 cut(s)	777, 1039
SfaNI	GCATC	1 cut(s)	361
SinI	GGWCC	2 cut(s)	1160, 1250
Sse9I	AATT	8 cut(s)	115, 363, 590, 736, 787, 1090, 1245, 1254
SsiI	CCGC	8 cut(s)	135, 153, 587, 596, 631, 710, 732, 778
StyD4I	CCNGG	1 cut(s)	1201
TaaI	ACNGT	6 cut(s)	161, 493, 541, 563, 867, 895
TaiI	ACGT	5 cut(s)	188, 362, 411, 1059, 1213
TaqI	TCGA	5 cut(s)	274, 528, 691, 825, 843
TasI	AATT	8 cut(s)	115, 363, 590, 736, 787, 1090, 1245, 1254
TauI	GCSGC	1 cut(s)	713
Tru1I	TTAA	1 cut(s)	180
Tru9I	TTAA	1 cut(s)	180
TscAI	CASTG	1 cut(s)	568
TseFI	GTSAC	2 cut(s)	355, 503
TseI	GCWGC	1 cut(s)	707
Tsp45I	GTSAC	2 cut(s)	355, 503
TspDTI	ATGAA	6 cut(s)	436, 455, 533, 740, 789, 995
TspGWI	ACGGA	1 cut(s)	711
TspRI	CASTG	1 cut(s)	568
VpaK11BI	GGWCC	2 cut(s)	1160, 1250
XapI	RAATTY	3 cut(s)	115, 590, 736
XceI	RCATGY	4 cut(s)	36, 262, 1192, 1201
XmiI	GTMKAC	2 cut(s)	129, 488
XmnI	GAANNNNTTC	1 cut(s)	13
ZraI	GACGTC	2 cut(s)	360, 1057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.