Rorug06G0361100

calcium ion binding

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
50957780 .. 50961186
3407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0361100.1

Sequence Viewer

Length: 2778 bp
ATGGAAAATAAAGACGATGAATCTTGTTATCAGCATTGTAGTAACACTGAGAATGAGCAAAGAGGATGTGAAGATGATGCAATTGATGGTGAGACTAATGAGGAACCTGAATATGATACTCAAGAGGCCAGTAGCGATACTCAAGTGCCCAGTGATGATGAACACGTGGATTCTGGTTTAGAAGGTATATGTATCTTGGATGGTAAGAAGCAAGCAGGAGGTGAGAATATCCCAGTTCTTGGTATGAGTTTTGAAAGTGATCAAGATGCATATGACTATTATAATTCATATGCTAGAGTTGTTGGGTTTAGCGTGCGAAGGCTGAGAAGCAACAAATATAAGCATACTAATGTGACATGGAAAAGAGAATTTTGTTGCTCTTGTGAAGGATTCTATACAAAAAAGAACACTCCAGAGAAGAAAAGAGAAGAAAGAAGATTCGGATGTAAGGCAATGCTTCAGATCAAACTAAATGAAGATGGGAAATTTGTTGTCACAAAGTTTGAAGCTGAGCATACCCATGATCTTGTTCCTGAATCAAGTTCACATGTCTTAAGGTCACAAAGAACCATAGAACCTTCTCAAGGTGGTTTGATGAATCAAATGCACTTTGCAGGGTTCAAACCATCACAGATCTTTTCATACCTGACCGTCGAAGCAGGAGGACCGGAAAATCTAAATTTCCTTCAGACCGATTGCAATAACTTCATTCAAAGAAGGCGGGCAAAGTTTTTGAAAAAAGGTGATGCTCAATGTTTGCTTGATTACTTTAAGAAGAAGCAAATGGAGGATAAGTCATTTTTTTATGCAATTCGAACAAACATTGACAATGAAATATGTGGTTGTTTTTTTTGTGATGGAAAATCAAGGAGTGATTATGCTATATTTGGTGATGCGGTTGTCTTTGATACAACCTTCAAAACCAACAAGTACGACATGGTTTGTGCTCCAATTGTTGGAGTTAATCATCATGGTCAAACAATTCTATTTGGCTGTGGGTTATTAGATGGGGAGACCACAGAGGCATGCAAATGGTTCTTTGATGTTTTCCTACAAGCTATGGGAGGAAAAAAACCAAAGACAATATTTACAGATCAAGCTGCATCGATTGCTAGTGCAATTAGGGAAGTACTACCTAATTCTCACCATCGTCTTTGTTTGTGGCACATATATCAAAATGCTGCAAAACACTTGAGTCAAGTCTTTACGAAGTTCTCCACATTTTCACAAGCTTTCAAAAGTTGCATATATGATCCAGAGAGTGTTGAAGAGTTTGAATCAAGTTGGAAAGATCTACTTGATTATTATGATTTGAAAGAAAATGAGTGGCTAAAAGACTTGTATAACTTGCGTGAGAAGTGGGCACAAATTTATGGCCGATGCAACTTTTGTGCAGGTATGACAACAACTCAGAGAAGTGAAAGTATAAACAAGACTTTGAAAAAGTTCTTTTATAAGAACCTTATTCTTTGTGAGTGGGTGGTACACTATGAGCGTGCTTTAGTTGATCGAAGAGAAAAGGAGAGGCTCGCGGAAGTTGCAACTACGCAAAGAAAGCGAAAACTTCTGTCTAATTGGAAAGTGGAGGTTGAAGCAGCAAAGATGTACACAAAAGCGAGTTTCAATTGTTTTCAAGAAGAGTTTCGAAAATGTTTGGACTTGGTACTGGAATTAGAGAGTGATGACGGGAGAATAGAAACATATGTGGTTCAAAGACCAGGGAATCCAAACTTGAGAAGGTCAGTCATCTATTCCCCTTCAAATCAGTCAGTTAATTGTAGTTGTAAGAGATTTCAGTTTGAAGGGATTCTTTGTGCACATGCATTAAAATTATTCCGTGAGTTAGGCTTGTCAACATTACCATCCAAGTACTACTTAAAAAGATGGAGACGAGATGCTAGACAAGGAGTTGATCTTGAATGTTATGGGGAAGCAAATTTTAGTGATCGGAGCGCATCTTCTGCACTCCAATATAGTCACTTGTCTCATATAGCACAAAGAATTGTAGCAAAAGGTGCAAAGGATAAGCAATCATCCACCTTGGTGGAGTCTAAATTGCTGGAGTTGGAGGCAGAATTGGATGGCAATTTATCCATTGGACAAGAACATGAAACAAATGGTGATATAGATTCAGACGATCAAGTGAATGAAAATAATGCAAATCTGGTTTTGCGTGATCCAAAAGTTAAGAGGCGTAGAAGGAGTGGCAAAGGTAAGAGAAATAATGATTTGGGATCTAAGAAGCAATCAAAAACGAGATCTTCATCAGTGCGGCAAGAACAAGAGGATGGTCCAGTACCCCTTAAAGAACAAAATGTCTCTGTATCAAAGAAAAGGAAAGCTCCATCTAAAAGAAAAGATTCTCAGGAACCCAGCTCATATGAACATGAGAAGACTGGCCCTTCAAAATCATATGAACATGTTCAGGGATCAATTAGATTGGTTAATCAAAATCAATCAAATATGCCCTTCATACATCCTGGATTTCCAACAACTTTTGGTGCTCAAGGCATTCCCTCGCATTATCCTTATGGATTTCCACCAACAACTTCTAGTGTACAAGCAATGCCTAATCAATCACATGACATTCCCTCGAATTATCCTTATGGATTTCCACCAACAACTTCTATTGTTCATGCAATTCCAAGTCAATCACTTGGTTACCAACCTATTCGTCCAATGTTTGATTATTCACTTATGTATTCACAGGCTATCATCCAACCAAGACCTCAAGGACCAGCTCACCAACTGAATTTTCCAGATCCATCGACATCTTAA

Protein Analysis

925

Amino Acids

105.71

Weight (kDa)

7.27

Isoelectric Point (pI)

56.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 92 - 178 5.8e-23 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 268 - 381 6.5e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
Transposase_mut PF00872 298 - 482 6.9e-09 Transposase, Mutator family
MULE PF10551 300 - 393 6.8e-30 MULE transposase domain
SWIM PF04434 592 - 614 2.2e-06 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000732)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g34500 FvH4_2g34510 FvH4_2g34530
prunus_persica Prupe.1G436400_v2.0.a1 Prupe.1G436500_v2.0.a1 Prupe.1G436600_v2.0.a1 Prupe.1G436700_v2.0.a1 Prupe.1G436800_v2.0.a1 Prupe.1G436900_v2.0.a1 Prupe.1G437000_v2.0.a1 Prupe.1G437100_v2.0.a1 Prupe.1G437200_v2.0.a1
pyrus_communis pycom08g08330 pycom08g08350 pycom08g08360 pycom08g08370 pycom08g08380 pycom15g07870 pycom15g07900
rosa_chinensis RchiOBHm_Chr3g0490571 RchiOBHm_Chr6g0278301 RchiOBHm_Chr6g0278331 RchiOBHm_Chr6g0307631 RchiOBHm_Chr6g0307841 RchiOBHm_Chr7g0227521
rosa_laevigata RLG00000001641 RLG00000006852 RLG00000010696 RLG00000010698 RLG00000010699 RLG00000010700 RLG00000013236
rosa_multiflora Rmu_co8134650.1_g000001 Rmu_sc0000031.1_g000033 Rmu_sc0000031.1_g000046 Rmu_sc0000791.1_g000066 Rmu_sc0001016.1_g000015 Rmu_sc0001016.1_g000032 Rmu_sc0001772.1_g000026 Rmu_sc0001772.1_g000027 Rmu_sc0001772.1_g000034 Rmu_sc0001772.1_g000067 Rmu_sc0003252.1_g000012 Rmu_sc0003862.1_g000006
rosa_roxburghii Rroxscaffold_1G00006670 Rroxscaffold_3G00232100 Rroxscaffold_5G00373780 Rroxscaffold_6G00393410 Rroxscaffold_7G00160830 Rroxscaffold_7G00160860 Rroxscaffold_7G00160880 Rroxscaffold_7G00190470
rosa_rugosa Rorug03G0243900 Rorug04G0257200 Rorug06G0116100 Rorug06G0361100 Rorug06G0361200 Rorug06G0361200 Rorug06G0361300
rosa_samantha Rh2AG314100 Rh4AG313500 Rh6BG229500 Rh6BG480600 Rh6BG480800 Rh6BG480900 Rh6BG481100 Rh7AG392700 Rh7AG394500 Rh7AG394600 Rh7AG394700 Rh7CG412100
rosa_wichuraiana Rw0G001040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 282, 1455
Acc36I ACCTGC 1 cut(s) 1385
AccB7I CCANNNNNTGG 2 cut(s) 239, 956
AccII CGCG 1 cut(s) 1532
AciI CCGC 4 cut(s) 721, 896, 1532, 2272
AclWI GGATC 5 cut(s) 1247, 2171, 2242, 2437, 2756
AcoI YGGCCR 1 cut(s) 1375
AcsI RAATTY 6 cut(s) 368, 485, 679, 1368, 1936, 2752
AcuI CTGAAG 2 cut(s) 443, 671
AcvI CACGTG 1 cut(s) 166
AfaI GTAC 8 cut(s) 932, 1131, 1485, 1607, 1665, 1871, 2298, 2559
AfiI CCNNNNNNNGG 3 cut(s) 239, 584, 956
AflII CTTAAG 1 cut(s) 553
AflIII ACRYGT 3 cut(s) 163, 547, 2419
AjnI CCWGG 2 cut(s) 1717, 2479
AjuI GAANNNNNNNTTGG 2 cut(s) 2739, 2771
AleI CACNNNNGTG 1 cut(s) 2042
AluBI AGCT 7 cut(s) 509, 1058, 1100, 1232, 2342, 2376, 2741
AluI AGCT 7 cut(s) 509, 1058, 1100, 1232, 2342, 2376, 2741
Alw21I GWGCWC 3 cut(s) 949, 1819, 2506
Alw26I GTCTC 5 cut(s) 86, 1007, 1882, 1989, 2323
Alw44I GTGCAC 1 cut(s) 1815
AlwI GGATC 5 cut(s) 1247, 2171, 2242, 2437, 2756
AoxI GGCC 3 cut(s) 126, 1375, 2398
ApaLI GTGCAC 1 cut(s) 1815
ApeKI GCWGC 3 cut(s) 1100, 1181, 1595
ApoI RAATTY 6 cut(s) 368, 485, 679, 1368, 1936, 2752
Asp700I GAANNNNTTC 5 cut(s) 1445, 1641, 1806, 2359, 2421
AspLEI GCGC 1 cut(s) 1955
AspS9I GGNCC 4 cut(s) 665, 2291, 2399, 2735
AsuHPI GGTGA 7 cut(s) 101, 233, 755, 902, 1136, 2132, 2735
AsuII TTCGAA 2 cut(s) 814, 1645
AvaII GGWCC 3 cut(s) 665, 2291, 2735
BaeGI GKGCMC 3 cut(s) 150, 1366, 1819
BaeI ACNNNNGTAYC 2 cut(s) 129, 162
BbrPI CACGTG 1 cut(s) 166
BbsI GAAGAC 1 cut(s) 2399
Bbv12I GWGCWC 3 cut(s) 949, 1819, 2506
BbvI GCAGC 3 cut(s) 1087, 1168, 1607
BciT130I CCWGG 2 cut(s) 1719, 2481
BclI TGATCA 1 cut(s) 259
BcoDI GTCTC 5 cut(s) 86, 1007, 1882, 1989, 2323
BfaI CTAG 4 cut(s) 294, 1113, 1899, 2553
BfrI CTTAAG 1 cut(s) 553
BfuAI ACCTGC 1 cut(s) 1385
BglII AGATCT 3 cut(s) 633, 1291, 2258
BisI GCNGC 4 cut(s) 1101, 1182, 1596, 2273
BlpI GCTNAGC 1 cut(s) 510
BlsI GCNGC 4 cut(s) 1102, 1183, 1597, 2274
BmcAI AGTACT 2 cut(s) 1131, 1871
Bme1390I CCNGG 2 cut(s) 1719, 2481
Bme18I GGWCC 3 cut(s) 665, 2291, 2735
BmgT120I GGNCC 4 cut(s) 665, 2291, 2399, 2735
BmiI GGNNCC 2 cut(s) 105, 2370
BmrFI CCNGG 2 cut(s) 1719, 2481
BmrI ACTGGG 2 cut(s) 144, 227
BmsI GCATC 8 cut(s) 67, 256, 736, 883, 1112, 1370, 1885, 1964
BmuI ACTGGG 2 cut(s) 144, 227
BpiI GAAGAC 1 cut(s) 2399
BpmI CTGGAG 2 cut(s) 396, 2081
Bpu1102I GCTNAGC 1 cut(s) 510
Bpu14I TTCGAA 2 cut(s) 814, 1645
BpuEI CTTGAG 7 cut(s) 105, 126, 567, 1213, 1753, 2490, 2715
Bsa29I ATCGAT 1 cut(s) 1106
BsaAI YACGTR 1 cut(s) 166
BsaBI GATNNNNATC 1 cut(s) 2263
BsaI GGTCTC 1 cut(s) 1007
BsaJI CCNNGG 2 cut(s) 1718, 2040
BsaWI WCCGGW 1 cut(s) 667
BsaXI ACNNNNNCTCC 2 cut(s) 779, 809
Bsc4I CCNNNNNNNGG 3 cut(s) 239, 584, 956
Bse1I ACTGG 6 cut(s) 129, 150, 233, 1671, 2294, 2401
Bse3DI GCAATG 2 cut(s) 459, 2571
Bse8I GATNNNNATC 1 cut(s) 2263
BseBI CCWGG 2 cut(s) 1719, 2481
BseCI ATCGAT 1 cut(s) 1106
BseDI CCNNGG 2 cut(s) 1718, 2040
BseGI GGATG 9 cut(s) 71, 205, 449, 1862, 2033, 2086, 2293, 2476, 2715
BseJI GATNNNNATC 1 cut(s) 2263
BseLI CCNNNNNNNGG 3 cut(s) 239, 584, 956
BseMI GCAATG 2 cut(s) 459, 2571
BseMII CTCAG 5 cut(s) 39, 314, 501, 1424, 2378
BseNI ACTGG 6 cut(s) 129, 150, 233, 1671, 2294, 2401
BseSI GKGCMC 3 cut(s) 150, 1366, 1819
BseXI GCAGC 3 cut(s) 1087, 1168, 1607
BseYI CCCAGC 1 cut(s) 2372
BsgI GTGCAG 2 cut(s) 1413, 1947
Bsh1236I CGCG 1 cut(s) 1532
BshFI GGCC 3 cut(s) 128, 1377, 2400
BshVI ATCGAT 1 cut(s) 1106
BsiHKAI GWGCWC 3 cut(s) 949, 1819, 2506
BsiSI CCGG 1 cut(s) 668
BslI CCNNNNNNNGG 3 cut(s) 239, 584, 956
BsmAI GTCTC 5 cut(s) 86, 1007, 1882, 1989, 2323
BsmBI CGTCTC 1 cut(s) 1882
BsmI GAATGC 1 cut(s) 2511
BsnI GGCC 3 cut(s) 128, 1377, 2400
Bso31I GGTCTC 1 cut(s) 1007
Bsp119I TTCGAA 2 cut(s) 814, 1645
Bsp1286I GDGCHC 5 cut(s) 150, 949, 1366, 1819, 2506
Bsp1407I TGTACA 2 cut(s) 1605, 2557
Bsp1720I GCTNAGC 1 cut(s) 510
BspACI CCGC 4 cut(s) 721, 896, 1532, 2272
BspANI GGCC 3 cut(s) 128, 1377, 2400
BspCNI CTCAG 5 cut(s) 40, 315, 502, 1423, 2377
BspDI ATCGAT 1 cut(s) 1106
BspFNI CGCG 1 cut(s) 1532
BspLI GGNNCC 2 cut(s) 105, 2370
BspMI ACCTGC 1 cut(s) 1385
BspPI GGATC 5 cut(s) 1247, 2171, 2242, 2437, 2756
BspT104I TTCGAA 2 cut(s) 814, 1645
BspTI CTTAAG 1 cut(s) 553
BspTNI GGTCTC 1 cut(s) 1007
BsrDI GCAATG 2 cut(s) 459, 2571
BsrGI TGTACA 2 cut(s) 1605, 2557
BsrI ACTGG 6 cut(s) 129, 150, 233, 1671, 2294, 2401
BssECI CCNNGG 2 cut(s) 1718, 2040
BssT1I CCWWGG 1 cut(s) 2040
Bst2UI CCWGG 2 cut(s) 1719, 2481
Bst4CI ACNGT 1 cut(s) 652
Bst6I CTCTTC 3 cut(s) 1263, 1507, 1632
BstAFI CTTAAG 1 cut(s) 553
BstAPI GCANNNNNTGC 3 cut(s) 1109, 1961, 2015
BstAUI TGTACA 2 cut(s) 1605, 2557
BstBAI YACGTR 1 cut(s) 166
BstBI TTCGAA 2 cut(s) 814, 1645
BstC8I GCNNGC 6 cut(s) 213, 314, 723, 1027, 1497, 1530
BstDEI CTNAG 6 cut(s) 48, 323, 510, 1410, 2238, 2364
BstEII GGTNACC 1 cut(s) 2660
BstENI CCTNNNNNAGG 1 cut(s) 582
BstF5I GGATG 9 cut(s) 71, 205, 449, 1862, 2033, 2086, 2293, 2476, 2715
BstFNI CGCG 1 cut(s) 1532
BstHHI GCGC 1 cut(s) 1955
BstMAI GTCTC 5 cut(s) 86, 1007, 1882, 1989, 2323
BstMWI GCNNNNNNNGC 5 cut(s) 1109, 1538, 1555, 1961, 2015
BstNI CCWGG 2 cut(s) 1719, 2481
BstNSI RCATGY 4 cut(s) 551, 1029, 1823, 2423
BstPI GGTNACC 1 cut(s) 2660
BstSCI CCNGG 2 cut(s) 1717, 2479
BstSLI GKGCMC 3 cut(s) 150, 1366, 1819
BstUI CGCG 1 cut(s) 1532
BstV1I GCAGC 3 cut(s) 1087, 1168, 1607
BstV2I GAAGAC 1 cut(s) 2399
BstX2I RGATCY 5 cut(s) 633, 1291, 2234, 2258, 2761
BstXI CCANNNNNNTGG 1 cut(s) 2044
BstYI RGATCY 5 cut(s) 633, 1291, 2234, 2258, 2761
Bsu15I ATCGAT 1 cut(s) 1106
BsuRI GGCC 3 cut(s) 128, 1377, 2400
BsuTUI ATCGAT 1 cut(s) 1106
BtsCI GGATG 9 cut(s) 71, 205, 449, 1862, 2033, 2086, 2293, 2476, 2715
BtsIMutI CAGTG 3 cut(s) 45, 157, 2274
BveI ACCTGC 1 cut(s) 1385
Cac8I GCNNGC 6 cut(s) 213, 314, 723, 1027, 1497, 1530
CfoI GCGC 1 cut(s) 1955
Cfr13I GGNCC 4 cut(s) 665, 2291, 2399, 2735
ClaI ATCGAT 1 cut(s) 1106
Csp6I GTAC 8 cut(s) 931, 1130, 1484, 1606, 1664, 1870, 2297, 2558
CviQI GTAC 8 cut(s) 931, 1130, 1484, 1606, 1664, 1870, 2297, 2558
DdeI CTNAG 6 cut(s) 48, 323, 510, 1410, 2238, 2364
EaeI YGGCCR 1 cut(s) 1375
Eam1104I CTCTTC 3 cut(s) 1263, 1507, 1632
EarI CTCTTC 3 cut(s) 1263, 1507, 1632
Eco130I CCWWGG 1 cut(s) 2040
Eco31I GGTCTC 1 cut(s) 1007
Eco47I GGWCC 3 cut(s) 665, 2291, 2735
Eco57I CTGAAG 2 cut(s) 443, 671
Eco72I CACGTG 1 cut(s) 166
Eco91I GGTNACC 1 cut(s) 2660
EcoNI CCTNNNNNAGG 1 cut(s) 582
EcoO65I GGTNACC 1 cut(s) 2660
EcoRII CCWGG 2 cut(s) 1717, 2479
EcoT14I CCWWGG 1 cut(s) 2040
EcoT22I ATGCAT 2 cut(s) 271, 1825
ErhI CCWWGG 1 cut(s) 2040
Esp3I CGTCTC 1 cut(s) 1882
FalI AAGNNNNNCTT 6 cut(s) 1281, 1313, 1794, 1826, 1859, 1891
FauI CCCGC 1 cut(s) 714
FauNDI CATATG 5 cut(s) 271, 289, 1702, 2380, 2413
FbaI TGATCA 1 cut(s) 259
Fnu4HI GCNGC 4 cut(s) 1101, 1182, 1596, 2273
FokI GGATG 9 cut(s) 78, 212, 456, 1849, 2020, 2093, 2300, 2463, 2702
Fsp4HI GCNGC 4 cut(s) 1101, 1182, 1596, 2273
FspBI CTAG 4 cut(s) 294, 1113, 1899, 2553
GlaI GCGC 1 cut(s) 1954
GluI GCNGC 4 cut(s) 1101, 1182, 1596, 2273
GsaI CCCAGC 1 cut(s) 2376
GsuI CTGGAG 2 cut(s) 396, 2081
HaeIII GGCC 3 cut(s) 128, 1377, 2400
HapII CCGG 1 cut(s) 668
HhaI GCGC 1 cut(s) 1955
Hin6I GCGC 1 cut(s) 1953
HinP1I GCGC 1 cut(s) 1953
HincII GTYRAC 1 cut(s) 1854
HindII GTYRAC 1 cut(s) 1854
HindIII AAGCTT 1 cut(s) 1230
HpaII CCGG 1 cut(s) 668
HphI GGTGA 7 cut(s) 101, 233, 755, 902, 1136, 2132, 2735
Hpy166II GTNNAC 6 cut(s) 545, 1486, 1608, 1817, 1854, 2558
Hpy188I TCNGA 6 cut(s) 443, 462, 690, 1413, 1950, 2134
Hpy188III TCNNGA 9 cut(s) 122, 263, 413, 533, 1256, 1634, 1916, 2366, 2759
Hpy8I GTNNAC 6 cut(s) 545, 1486, 1608, 1817, 1854, 2558
Hpy99I CGWCG 1 cut(s) 656
HpyCH4III ACNGT 1 cut(s) 652
HpyCH4IV ACGT 1 cut(s) 165
HpyF10VI GCNNNNNNNGC 5 cut(s) 1109, 1538, 1555, 1961, 2015
HpyF3I CTNAG 6 cut(s) 48, 323, 510, 1410, 2238, 2364
HpySE526I ACGT 1 cut(s) 165
HspAI GCGC 1 cut(s) 1953
Ksp22I TGATCA 1 cut(s) 259
LmnI GCTCC 3 cut(s) 952, 1950, 2347
Lsp1109I GCAGC 3 cut(s) 1087, 1168, 1607
LweI GCATC 8 cut(s) 67, 256, 736, 883, 1112, 1370, 1885, 1964
MaeI CTAG 4 cut(s) 294, 1113, 1899, 2553
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 6 cut(s) 41, 352, 493, 558, 1976, 2660
MfeI CAATTG 3 cut(s) 81, 951, 1624
MflI RGATCY 5 cut(s) 633, 1291, 2234, 2258, 2761
MhlI GDGCHC 5 cut(s) 150, 949, 1366, 1819, 2506
MlyI GAGTC 2 cut(s) 1204, 2057
MmeI TCCRAC 5 cut(s) 937, 1265, 2046, 2513, 2743
Mph1103I ATGCAT 2 cut(s) 271, 1825
MroXI GAANNNNTTC 5 cut(s) 1445, 1641, 1806, 2359, 2421
MslI CAYNNNNRTG 4 cut(s) 348, 519, 1030, 2042
MspCI CTTAAG 1 cut(s) 553
MspI CCGG 1 cut(s) 668
MspR9I CCNGG 2 cut(s) 1719, 2481
MunI CAATTG 3 cut(s) 81, 951, 1624
Mva1269I GAATGC 1 cut(s) 2511
MvaI CCWGG 2 cut(s) 1719, 2481
MvnI CGCG 1 cut(s) 1532
MwoI GCNNNNNNNGC 5 cut(s) 1109, 1538, 1555, 1961, 2015
NdeI CATATG 5 cut(s) 271, 289, 1702, 2380, 2413
NlaIV GGNNCC 2 cut(s) 105, 2370
NmuCI GTSAC 4 cut(s) 352, 493, 558, 1976
NsiI ATGCAT 2 cut(s) 271, 1825
NspI RCATGY 4 cut(s) 551, 1029, 1823, 2423
NspV TTCGAA 2 cut(s) 814, 1645
OliI CACNNNNGTG 1 cut(s) 2042
PaeI GCATGC 1 cut(s) 1029
PciI ACATGT 2 cut(s) 547, 2419
PctI GAATGC 1 cut(s) 2511
PdmI GAANNNNTTC 5 cut(s) 1445, 1641, 1806, 2359, 2421
PflMI CCANNNNNTGG 2 cut(s) 239, 956
PfoI TCCNGGA 1 cut(s) 2479
PkrI GCNGC 4 cut(s) 1102, 1183, 1597, 2274
PleI GAGTC 2 cut(s) 1203, 2056
PmaCI CACGTG 1 cut(s) 166
PmlI CACGTG 1 cut(s) 166
PpsI GAGTC 2 cut(s) 1203, 2056
Ppu21I YACGTR 1 cut(s) 166
PscI ACATGT 2 cut(s) 547, 2419
PsiI TTATAA 2 cut(s) 282, 1455
Psp6I CCWGG 2 cut(s) 1717, 2479
PspCI CACGTG 1 cut(s) 166
PspEI GGTNACC 1 cut(s) 2660
PspFI CCCAGC 1 cut(s) 2372
PspGI CCWGG 2 cut(s) 1717, 2479
PspN4I GGNNCC 2 cut(s) 105, 2370
PspPI GGNCC 4 cut(s) 665, 2291, 2399, 2735
PsuI RGATCY 5 cut(s) 633, 1291, 2234, 2258, 2761
RsaI GTAC 8 cut(s) 932, 1131, 1485, 1607, 1665, 1871, 2298, 2559
RsaNI GTAC 8 cut(s) 931, 1130, 1484, 1606, 1664, 1870, 2297, 2558
RseI CAYNNNNRTG 4 cut(s) 348, 519, 1030, 2042
SatI GCNGC 4 cut(s) 1101, 1182, 1596, 2273
Sau96I GGNCC 4 cut(s) 665, 2291, 2399, 2735
ScaI AGTACT 2 cut(s) 1131, 1871
SchI GAGTC 2 cut(s) 1204, 2057
ScrFI CCNGG 2 cut(s) 1719, 2481
SduI GDGCHC 5 cut(s) 150, 949, 1366, 1819, 2506
SfaNI GCATC 8 cut(s) 67, 256, 736, 883, 1112, 1370, 1885, 1964
SfuI TTCGAA 2 cut(s) 814, 1645
SinI GGWCC 3 cut(s) 665, 2291, 2735
SmiMI CAYNNNNRTG 4 cut(s) 348, 519, 1030, 2042
SmlI CTYRAG 8 cut(s) 120, 141, 553, 582, 1192, 1732, 2505, 2730
SmoI CTYRAG 8 cut(s) 120, 141, 553, 582, 1192, 1732, 2505, 2730
SphI GCATGC 1 cut(s) 1029
SsiI CCGC 4 cut(s) 721, 896, 1532, 2272
SspI AATATT 1 cut(s) 1086
SspMI CTAG 4 cut(s) 294, 1113, 1899, 2553
StyD4I CCNGG 2 cut(s) 1717, 2479
StyI CCWWGG 1 cut(s) 2040
TaaI ACNGT 1 cut(s) 652
TaiI ACGT 1 cut(s) 168
TaqI TCGA 7 cut(s) 654, 814, 1106, 1510, 1645, 2594, 2768
TaqII GACCGA 1 cut(s) 707
TatI WGTACW 4 cut(s) 1129, 1605, 1869, 2557
TauI GCSGC 1 cut(s) 2275
TscAI CASTG 3 cut(s) 52, 157, 2274
TseFI GTSAC 4 cut(s) 352, 493, 558, 1976
TseI GCWGC 3 cut(s) 1100, 1181, 1595
Tsp45I GTSAC 4 cut(s) 352, 493, 558, 1976
TspGWI ACGGA 1 cut(s) 1826
TspRI CASTG 3 cut(s) 52, 157, 2274
Van91I CCANNNNNTGG 2 cut(s) 239, 956
Vha464I CTTAAG 1 cut(s) 553
VneI GTGCAC 1 cut(s) 1815
VpaK11BI GGWCC 3 cut(s) 665, 2291, 2735
XagI CCTNNNNNAGG 1 cut(s) 582
XapI RAATTY 6 cut(s) 368, 485, 679, 1368, 1936, 2752
XceI RCATGY 4 cut(s) 551, 1029, 1823, 2423
XmnI GAANNNNTTC 5 cut(s) 1445, 1641, 1806, 2359, 2421
XspI CTAG 4 cut(s) 294, 1113, 1899, 2553
ZrmI AGTACT 2 cut(s) 1131, 1871
Zsp2I ATGCAT 2 cut(s) 271, 1825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.