Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000344

Physical Location & Seq

Genomic Coordinates Reverse (-)

6695174 .. 6701355

Gene Structure 6182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G19820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3351 bp

ATGGCTTCCGAGGCGAATCAGCTTCAGCAAGCGCAACTCGCGATGGTTCTCGGCTCCGATTCCGCGCCCTTCGAGACGCTAATCTCTCACCTCATGTCTTCTTCCAACGAGCAACGTTCCTCCGCCGAGTCTCTTTTCAATCTCGCTAAACAAAGCAATCCCGATACCCTCTCTTTGAAGCTTGCTCATCTTCTTCAGCTTTCTCCTCATCCCGAAGGTCGTGCTATGGCCGCCGTCCTTCTCCGGAAGTTGTTAACACGCGACGATGCTTATCTATGGCCTCGTCTCTCCCTCTCCACTCAATCTTCCCTCAAATCTTCGATGTTGTATTGTATTCAACATGAGGAGGCTAAATCGATCTCTAAGAAGATTTGCGATACAGTCTCTGAACTTGCATCCGGGATTTTACCGGAGAATGGATGGCCGGAGTTGCTTCCGTTTGTTTTCCAGTGTGTTACTTCTGTTACCCCTAAATTGCAGGAATCGGCGTTTTTAATCTTGGCTCAATTGTCGCAGTACGTTGGGGAGACTCTTACCCCTCACATCAAGGAACTCCATGGCGTGTTTCTTCAGTGCTTGAGTAGTAATTCTGCTAGCTCCGATGTTAAAATCGCCGCTCTCAACGCCGTGATTAGTTTCGTTCAGTGTCTGGCCAACTCAACGGAGAGAGATAGATTCCAAGATGTTTTGCCTGCGATGATCAGGACGTTGACCGAATCTCTGAACAATGGGAATGAAGCAACTGCACAGGAGGCACTTGAGCTTTTGATTGAATTGGCTGGTACCGAGCCACGGTTCCTTAGACGGCAACTTGTTGACATAGTTGGTTCGATGCTTCAGATTGCAGAGGCTGATTCCCTCGAGGAGAGTACACGTCATCTTGCGATTGAGTTTTTGGTTACTCTGGCTGAGGCGCGTGAGCGTGCCCCTGGTATGGTCAGGAAGCTTCCTCAGTTTATTGACAGGTTGTTTGCTGTTCTTATGAAGATGCTCGAGGATATTGAGGACGATCCTGCTTGGTACAGCGCTGAGACTGAGGATGAAGATGCTGGCGAGACAAGCAACTACAGCATGGGTCAAGAGTGTTTGGATCGGTTAGCAATTTCTCTGGGAGGAAACACCATTGTTCCGGTTGCATATCAGCAGTTTTCTGCTTACTTGGCTGCCTCTGAGTGGCAGAAACATCATGCTTCTTTGATTGCACTTGCTCAGATTGCTGAAGGTTGTTCAAAGGTGATGATAAAAAATCTAGACCAAGTGGTGTCAATGGTTTTGAGCCAGTTTCAAAGTCCTCATCCTCGCGTAAGGTGGGCTGCTATAAATGCGATTGGACAGTTGTCTACAGATTTGGGTCCAGATTTGCAAAACCAACATCATGAGAGAGTGCTCCCCGCACTTGCTGCTGCTATGGATGATTTCCAGAATCCACGAGTGCAGGCTCATGCTGCTTCAGCAGTACTCAACTTCAGTGAAAATTGTACTCCTGAAATATTGTCACCTTATTTAGACGGAGTAGTGAGCAAGTTACTTGTGCTACTACAAAATGGTAAACAAATGGTGCAAGAAGGAGCTTTAACTGCTCTTGCTTCAGTGGCTGATTCATCACAGGAACACTTTCAAAAGTACTATGATACTGTCATGCCTTATCTCAAAACTATTTTGATGAATGCAACTGACAAGTCTAAGCGGATGCTTCGTGCCAAATCCATGGAGTGCATCAGTCTTGTTGGAATGGCAGTTGGAAAGGACAGATTCAAGGAAGATGCTAGACAGGTCATGGAAGTGCTAATGTCATTGCAAGGTTCTCAGATGGAGGCAGACGATCCAATAACAAGTTACATGTTACAGGCATGGGCTAGGCTTTGCAAGTGTCTAGGTCAAGATTTCCTCCCATACATGAAGGTTGTGATGCCTCCTTTGCTTCAGTCAGCTCAACTTAAGCCAGATGTAACAATTACATCTGCTGATTCAGAAGATGAAGCAGAGGATTCTGATGATGAAAGCATGGAGACCATTATCCTGGGCGACAAAAGAATAGGGATCAAAACAAGTGTTCTAGAGGAAAAGGCCACGGCTTGTAACATGCTTTGTTGCTATGCTGATGAGTTAAAAGAAGGATTTTTTCCTTGGATTGATCAGGTTGCACCTACATTGGTTCCTTTACTGAAATTCTATTTTCACGAAGAAGTTAGAAGAGCAGCTGTTTCAGCCATGCCGGAACTAATGCGCTCAGCCAAGCTGGCAATAGAGAAAGGGGAATCTCAAGGGCGAGATCTATCATATTTGAAGCAGCTTTCTGACTACATTATTCCAGCCATGCTGGAAGCTTTGCATAAAGAACCTGATACAGAGATCTGTGTGAGTATGTTGGAAGCTATCAATGAATGCTTGCAGATCTCTGGAAATCTTTTGGATGAAGGGAAAATTAGATCCATAGTTGATGAGATAAAGCAAGTTATGACCGCAAGCTCTAGTAGGAAGCGAGAGAGGGGAGAGAGGGCCCATGCTGAAGACTTTGACGCTGAAGAGGGAGAGCTTATTAAAGAGGAAAATGAGCAAGAGGAAGAAATTTTTGATCAAGTCGGTGAAATATTGGGAACATTGGTTAAGACATTCAAGGCCTCATTTCTACCTTTCTTCGATGAACTGTCCTCTTACTTAACTCCTATGTGGGGAAGAGATAAAACAGCGGAAGAGAGAAGGATTGCTATATGCATTTTTGATGATGTAGCAGAACAATGCCGTGAAGCTGCCTTTAAATATTATGATACCTATCTTCCATTTGTACTGGAAGCTTGCAATGACGAGAGCCCAGAGGTTCGACAGGCTGCTGTTTATGGGCTTGGCGTTTGTGCTGAGTTTGGCGGCTCTGTATTCAAGCCTCTTATTGGAGAGGCTCTGTCAAGATTAAATGTTGTGATACAGCTGCCAAATGCTCGGCAATCTGAAAATGCCATGGCATATGATAATGCTGTATCAGCCGTGGGAAAGATCTGCCAATTTCACCGTGATAGTATTGATTCTTCTCAGGTACTTCCTGCGTGGTTGAACTGTTTGCCTATAAGCAATGATGTCCTTGAAGCCAAAGTGGTTCATGATCAGCTCTGCTCAATGGTTGAAAGGCAAGATGTAGACCTTTTAGGCCCCAATAACCAGCATCTTCCGAAAATCTTAATAGTTTTTGCCGAGGTACTTACAGGGAAAGATGTGGTGACACAAGAGACAGCAGGTCGTATGATAAATATATTAAGGCAACTTCAACAGACACTGCCACCATCGGCGTTGGCCTCAACATGGTCAACGCTGAAACCCGAACAGCAGCTCGCTCTCCAATCCATGCTTTCCTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

1116

Amino Acids

123.82

Weight (kDa)

4.77

Isoelectric Point (pI)

48.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_IPO5	PF25780	118 - 275	3.7e-35	IPO5-like, TPR repeats
Importin_rep_4	PF18808	286 - 377	1.5e-23	Importin repeat
TOR1L1_N	PF24714	357 - 578	6.9e-08	TORTIFOLIA1 N-terminal
HEAT_EZ	PF13513	392 - 446	2.8e-07	HEAT-like repeat
HEAT_2	PF13646	396 - 485	6.9e-06	HEAT repeats
HEAT_EZ	PF13513	476 - 530	7.2e-07	HEAT-like repeat
TPR_IMB1	PF25574	483 - 649	1.8e-11	Importin subunit beta-1-like, TPR repeats
IFRD	PF05004	485 - 626	3.7e-06	Interferon-related developmental regulator (IFRD)
Importin_rep_6	PF18829	786 - 888	1.7e-18	Importin repeat 6
HEAT	PF02985	926 - 953	7.5e-06	HEAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19820
fragaria_vesca	FvH4_1g21410 FvH4_1g28300 FvH4_1g28300 FvH4_2g17651 FvH4_3g45470 FvH4_3g45470
malus_domestica	MD00G1158900.v1.1 MD03G1004600.v1.1 MD03G1004700.v1.1 MD05G1225200.v1.1 MD11G1005300.v1.1 MD11G1005800.v1.1
prunus_persica	Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1
pyrus_communis	pycom03g00480 pycom03g00490 pycom03g00500 pycom11g00440 pycom11g00450
rosa_chinensis	RchiOBHm_Chr1g0324711 RchiOBHm_Chr2g0142151 RchiOBHm_Chr2g0142161 RchiOBHm_Chr3g0475691 RchiOBHm_Chr3g0496831 RchiOBHm_Chr4g0399761 RchiOBHm_Chr4g0399771 RchiOBHm_Chr4g0399781 RchiOBHm_Chr4g0419561 RchiOBHm_Chr5g0054221 RchiOBHm_Chr5g0078241 RchiOBHm_Chr5g0083261 RchiOBHm_Chr6g0253081 RchiOBHm_Chr6g0253091 RchiOBHm_Chr6g0253101
rosa_laevigata	RLG00000006894 RLG00000017613 RLG00000022498 RLG00000023521 RLG00000029311 RLG00000034357 RLG00000037024
rosa_multiflora	Rmu_co8031396.1_g000001 Rmu_co8481369.1_g000001 Rmu_sc0000455.1_g000002 Rmu_sc0000810.1_g000007 Rmu_sc0001438.1_g000001 Rmu_sc0001692.1_g000008 Rmu_sc0001692.1_g000009 Rmu_sc0002130.1_g000004 Rmu_sc0002481.1_g000043 Rmu_sc0004932.1_g000025 Rmu_sc0004967.1_g000012 Rmu_sc0006889.1_g000031 Rmu_sc0011792.1_g000006 Rmu_sc0013655.1_g000001 Rmu_sc0036178.1_g000001 Rmu_sc0040082.1_g000001 Rmu_sc0041125.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138150 Rroxscaffold_4G00314380 Rroxscaffold_5G00362400 Rroxscaffold_6G00388660 Rroxscaffold_6G00393970
rosa_rugosa	Rorug02G0091400 Rorug03G0288200 Rorug03G0288200 Rorug05G0483800
rosa_samantha	Rh1AG440500 Rh2DG505100 Rh2DG505200 Rh3AG331800 Rh3BG368400 Rh3CG343100 Rh3CG364700 Rh3DG367800 Rh4BG222300 Rh4CG233300 Rh5AG533200 Rh5BG560500 Rh5CG583200 Rh5DG381000 Rh5DG569800 Rh6AG307400 Rh6AG307500 Rh6AG307600 Rh7AG013900 Rh7AG014000 Rh7AG153300 Rh7AG154100 Rh7AG283000 Rh7AG385300 Rh7AG446100 Rh7AG487800 Rh7CG302200 Rh7DG365100 Rh7DG365200
rosa_wichuraiana	Rw1G008740 Rw2G039350 Rw3G029040 Rw4G018940 Rw4G018950 Rw5G049970 Rw6G002460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	860
Acc36I	ACCTGC	1 cut(s)	3218
Acc65I	GGTACC	1 cut(s)	782
AccB1I	GGYRCC	1 cut(s)	782
AccBSI	CCGCTC	1 cut(s)	617
AccI	GTMKAC	2 cut(s)	1340, 3132
AccII	CGCG	5 cut(s)	41, 65, 261, 916, 1302
AccIII	TCCGGA	1 cut(s)	243
AciI	CCGC	9 cut(s)	63, 123, 231, 615, 1392, 1687, 2463, 2690, 2865
AclI	AACGTT	1 cut(s)	115
AclWI	GGATC	5 cut(s)	1004, 1098, 1817, 2048, 2424
AcoI	YGGCCR	3 cut(s)	228, 422, 651
AcsI	RAATTY	2 cut(s)	2168, 2568
AfeI	AGCGCT	1 cut(s)	1027
AfiI	CCNNNNNNNGG	7 cut(s)	416, 792, 934, 1173, 2672, 2888, 3294
AflII	CTTAAG	1 cut(s)	1937
AflIII	ACRYGT	2 cut(s)	872, 1839
AhdI	GACNNNNNGTC	1 cut(s)	3228
AjiI	CACGTC	1 cut(s)	875
AjnI	CCWGG	2 cut(s)	928, 2019
Alw21I	GWGCWC	1 cut(s)	1389
Alw26I	GTCTC	9 cut(s)	68, 135, 290, 388, 521, 1025, 1049, 2003, 3215
AlwI	GGATC	5 cut(s)	1004, 1098, 1817, 2048, 2424
AlwNI	CAGNNNCTG	5 cut(s)	386, 649, 851, 1595, 3268
Ama87I	CYCGRG	2 cut(s)	860, 992
Aor13HI	TCCGGA	1 cut(s)	243
Aor51HI	AGCGCT	1 cut(s)	1027
AoxI	GGCC	9 cut(s)	228, 278, 422, 651, 2067, 2499, 2619, 3142, 3285
ApaI	GGGCCC	1 cut(s)	2503
ApoI	RAATTY	2 cut(s)	2168, 2568
ArsI	GACNNNNNNTTYG	2 cut(s)	953, 985
Asp700I	GAANNNNTTC	1 cut(s)	1614
Asp718I	GGTACC	1 cut(s)	782
AspLEI	GCGC	5 cut(s)	34, 67, 916, 1028, 2229
AspS9I	GGNCC	4 cut(s)	1352, 2499, 2500, 3143
AsuC2I	CCSGG	1 cut(s)	400
AsuHPI	GGTGA	6 cut(s)	80, 1246, 1488, 2597, 2996, 3223
AsuNHI	GCTAGC	1 cut(s)	593
AvaI	CYCGRG	2 cut(s)	860, 992
AvaII	GGWCC	1 cut(s)	1352
BaeGI	GKGCMC	2 cut(s)	928, 2503
BalI	TGGCCA	1 cut(s)	653
BanI	GGYRCC	1 cut(s)	782
BanII	GRGCYC	2 cut(s)	2503, 2813
BarI	GAAGNNNNNNTAC	2 cut(s)	3007, 3039
BauI	CACGAG	1 cut(s)	1428
BbsI	GAAGAC	2 cut(s)	90, 2517
Bbv12I	GWGCWC	1 cut(s)	1389
BbvCI	CCTCAGC	1 cut(s)	909
BccI	CCATC	4 cut(s)	37, 414, 1804, 3283
BceAI	ACGGC	6 cut(s)	218, 611, 821, 2088, 2727, 2966
BcgI	CGANNNNNNTGC	2 cut(s)	203, 237
BciT130I	CCWGG	2 cut(s)	930, 2021
BclI	TGATCA	4 cut(s)	699, 2134, 2575, 3097
BcnI	CCSGG	1 cut(s)	400
BcoDI	GTCTC	9 cut(s)	68, 135, 290, 388, 521, 1025, 1049, 2003, 3215
BfaI	CTAG	7 cut(s)	594, 1250, 1767, 1857, 1874, 2057, 2472
BfmI	CTRYAG	2 cut(s)	1066, 1341
BfoI	RGCGCY	1 cut(s)	1029
BfrI	CTTAAG	1 cut(s)	1937
BfuAI	ACCTGC	1 cut(s)	3218
BglI	GCCNNNNNGGC	1 cut(s)	2240
BglII	AGATCT	4 cut(s)	2272, 2352, 2394, 2991
BlpI	GCTNAGC	1 cut(s)	2230
BmcAI	AGTACT	2 cut(s)	1458, 1625
Bme1390I	CCNGG	3 cut(s)	400, 930, 2021
Bme18I	GGWCC	1 cut(s)	1352
BmeRI	GACNNNNNGTC	1 cut(s)	3228
BmeT110I	CYCGRG	2 cut(s)	860, 992
BmgBI	CACGTC	1 cut(s)	875
BmgT120I	GGNCC	4 cut(s)	1352, 2499, 2500, 3143
BmiI	GGNNCC	7 cut(s)	55, 784, 797, 1353, 2157, 2501, 3145
BmrFI	CCNGG	3 cut(s)	400, 930, 2021
BmtI	GCTAGC	1 cut(s)	597
BoxI	GACNNNNGTC	1 cut(s)	1336
BpiI	GAAGAC	2 cut(s)	90, 2517
Bpu10I	CCTNAGC	1 cut(s)	909
Bpu1102I	GCTNAGC	1 cut(s)	2230
BpuEI	CTTGAG	3 cut(s)	598, 779, 2247
BpuMI	CCSGG	1 cut(s)	400
Bsa29I	ATCGAT	1 cut(s)	356
BsaBI	GATNNNNATC	2 cut(s)	270, 2772
BsaI	GGTCTC	1 cut(s)	2003
BsaWI	WCCGGW	3 cut(s)	243, 409, 1129
Bsc4I	CCNNNNNNNGG	7 cut(s)	416, 792, 934, 1173, 2672, 2888, 3294
Bse1I	ACTGG	3 cut(s)	448, 1279, 2793
Bse3DI	GCAATG	3 cut(s)	1793, 2806, 3073
Bse8I	GATNNNNATC	2 cut(s)	270, 2772
BseAI	TCCGGA	1 cut(s)	243
BseBI	CCWGG	2 cut(s)	930, 2021
BseCI	ATCGAT	1 cut(s)	356
BseGI	GGATG	8 cut(s)	208, 395, 425, 1045, 1294, 1417, 1695, 2419
BseJI	GATNNNNATC	2 cut(s)	270, 2772
BseLI	CCNNNNNNNGG	7 cut(s)	416, 792, 934, 1173, 2672, 2888, 3294
BseMI	GCAATG	3 cut(s)	1793, 2806, 3073
BseNI	ACTGG	3 cut(s)	448, 1279, 2793
BseRI	GAGGAG	3 cut(s)	195, 359, 878
BseSI	GKGCMC	2 cut(s)	928, 2503
BsgI	GTGCAG	2 cut(s)	729, 1454
Bsh1236I	CGCG	5 cut(s)	41, 65, 261, 916, 1302
BshFI	GGCC	9 cut(s)	230, 280, 424, 653, 2069, 2501, 2621, 3144, 3287
BshNI	GGYRCC	1 cut(s)	782
BshVI	ATCGAT	1 cut(s)	356
BsiHKAI	GWGCWC	1 cut(s)	1389
BsiHKCI	CYCGRG	2 cut(s)	860, 992
BsiSI	CCGG	6 cut(s)	244, 399, 410, 425, 1130, 2216
BslI	CCNNNNNNNGG	7 cut(s)	416, 792, 934, 1173, 2672, 2888, 3294
BsmAI	GTCTC	9 cut(s)	68, 135, 290, 388, 521, 1025, 1049, 2003, 3215
BsmBI	CGTCTC	2 cut(s)	68, 290
BsmI	GAATGC	2 cut(s)	1672, 2390
BsnI	GGCC	9 cut(s)	230, 280, 424, 653, 2069, 2501, 2621, 3144, 3287
Bso31I	GGTCTC	1 cut(s)	2003
BsoBI	CYCGRG	2 cut(s)	860, 992
Bsp120I	GGGCCC	1 cut(s)	2499
Bsp1286I	GDGCHC	4 cut(s)	928, 1389, 2503, 2813
Bsp13I	TCCGGA	1 cut(s)	243
Bsp1720I	GCTNAGC	1 cut(s)	2230
Bsp19I	CCATGG	3 cut(s)	556, 1707, 2955
Bsp68I	TCGCGA	1 cut(s)	41
BspACI	CCGC	9 cut(s)	63, 123, 231, 615, 1392, 1687, 2463, 2690, 2865
BspANI	GGCC	9 cut(s)	230, 280, 424, 653, 2069, 2501, 2621, 3144, 3287
BspDI	ATCGAT	1 cut(s)	356
BspEI	TCCGGA	1 cut(s)	243
BspFNI	CGCG	5 cut(s)	41, 65, 261, 916, 1302
BspHI	TCATGA	2 cut(s)	1375, 3094
BspLI	GGNNCC	7 cut(s)	55, 784, 797, 1353, 2157, 2501, 3145
BspMI	ACCTGC	1 cut(s)	3218
BspOI	GCTAGC	1 cut(s)	597
BspPI	GGATC	5 cut(s)	1004, 1098, 1817, 2048, 2424
BspQI	GCTCTTC	1 cut(s)	2188
BspT107I	GGYRCC	1 cut(s)	782
BspTI	CTTAAG	1 cut(s)	1937
BspTNI	GGTCTC	1 cut(s)	2003
BsrBI	CCGCTC	1 cut(s)	617
BsrDI	GCAATG	3 cut(s)	1793, 2806, 3073
BsrI	ACTGG	3 cut(s)	448, 1279, 2793
BssSI	CACGAG	1 cut(s)	1428
BssT1I	CCWWGG	4 cut(s)	556, 1707, 2126, 2955
Bst2BI	CACGAG	1 cut(s)	1428
Bst2UI	CCWGG	2 cut(s)	930, 2021
Bst4CI	ACNGT	7 cut(s)	382, 795, 1335, 1636, 2649, 3008, 3053
Bst6I	CTCTTC	4 cut(s)	2188, 2520, 2671, 2688
BstAFI	CTTAAG	1 cut(s)	1937
BstAPI	GCANNNNNTGC	1 cut(s)	1400
BstDSI	CCRYGG	6 cut(s)	556, 791, 1707, 2070, 2955, 2982
BstF5I	GGATG	8 cut(s)	208, 395, 425, 1045, 1294, 1417, 1695, 2419
BstFNI	CGCG	5 cut(s)	41, 65, 261, 916, 1302
BstH2I	RGCGCY	1 cut(s)	1029
BstHHI	GCGC	5 cut(s)	34, 67, 916, 1028, 2229
BstMAI	GTCTC	9 cut(s)	68, 135, 290, 388, 521, 1025, 1049, 2003, 3215
BstNI	CCWGG	2 cut(s)	930, 2021
BstNSI	RCATGY	2 cut(s)	1843, 2086
BstPAI	GACNNNNGTC	1 cut(s)	1336
BstSCI	CCNGG	3 cut(s)	398, 928, 2019
BstSFI	CTRYAG	2 cut(s)	1066, 1341
BstSLI	GKGCMC	2 cut(s)	928, 2503
BstUI	CGCG	5 cut(s)	41, 65, 261, 916, 1302
BstV2I	GAAGAC	2 cut(s)	90, 2517
BstX2I	RGATCY	5 cut(s)	2272, 2352, 2394, 2429, 2991
BstXI	CCANNNNNNTGG	2 cut(s)	1708, 2020
BstYI	RGATCY	5 cut(s)	2272, 2352, 2394, 2429, 2991
Bsu15I	ATCGAT	1 cut(s)	356
BsuRI	GGCC	9 cut(s)	230, 280, 424, 653, 2069, 2501, 2621, 3144, 3287
BsuTUI	ATCGAT	1 cut(s)	356
BtgI	CCRYGG	6 cut(s)	556, 791, 1707, 2070, 2955, 2982
BtgZI	GCGATG	2 cut(s)	56, 710
BtrI	CACGTC	1 cut(s)	875
BtsCI	GGATG	8 cut(s)	208, 395, 425, 1045, 1294, 1417, 1695, 2419
BtsI	GCAGTG	1 cut(s)	3266
BtsIMutI	CAGTG	6 cut(s)	455, 578, 650, 1474, 1596, 3266
BtuMI	TCGCGA	1 cut(s)	41
BveI	ACCTGC	1 cut(s)	3218
CaiI	CAGNNNCTG	5 cut(s)	386, 649, 851, 1595, 3268
CciI	TCATGA	2 cut(s)	1375, 3094
CfoI	GCGC	5 cut(s)	34, 67, 916, 1028, 2229
Cfr13I	GGNCC	4 cut(s)	1352, 2499, 2500, 3143
ClaI	ATCGAT	1 cut(s)	356
CseI	GACGC	2 cut(s)	85, 2528
DraI	TTTAAA	1 cut(s)	2758
DriI	GACNNNNNGTC	1 cut(s)	3228
EaeI	YGGCCR	3 cut(s)	228, 422, 651
Eam1104I	CTCTTC	4 cut(s)	2188, 2520, 2671, 2688
Eam1105I	GACNNNNNGTC	1 cut(s)	3228
EarI	CTCTTC	4 cut(s)	2188, 2520, 2671, 2688
EciI	GGCGGA	1 cut(s)	112
Eco130I	CCWWGG	4 cut(s)	556, 1707, 2126, 2955
Eco147I	AGGCCT	1 cut(s)	2621
Eco24I	GRGCYC	2 cut(s)	2503, 2813
Eco31I	GGTCTC	1 cut(s)	2003
Eco47I	GGWCC	1 cut(s)	1352
Eco47III	AGCGCT	1 cut(s)	1027
Eco88I	CYCGRG	2 cut(s)	860, 992
EcoO109I	RGGNCCY	2 cut(s)	2499, 3143
EcoRII	CCWGG	2 cut(s)	928, 2019
EcoT14I	CCWWGG	4 cut(s)	556, 1707, 2126, 2955
EcoT22I	ATGCAT	1 cut(s)	2717
EcoT38I	GRGCYC	2 cut(s)	2503, 2813
ErhI	CCWWGG	4 cut(s)	556, 1707, 2126, 2955
Esp3I	CGTCTC	2 cut(s)	68, 290
FauI	CCCGC	1 cut(s)	1399
FauNDI	CATATG	1 cut(s)	2962
FbaI	TGATCA	4 cut(s)	699, 2134, 2575, 3097
FblI	GTMKAC	2 cut(s)	1340, 3132
FokI	GGATG	8 cut(s)	195, 382, 432, 1052, 1281, 1424, 1702, 2426
FriOI	GRGCYC	2 cut(s)	2503, 2813
FspBI	CTAG	7 cut(s)	594, 1250, 1767, 1857, 1874, 2057, 2472
GlaI	GCGC	5 cut(s)	33, 66, 915, 1027, 2228
HaeII	RGCGCY	1 cut(s)	1029
HaeIII	GGCC	9 cut(s)	230, 280, 424, 653, 2069, 2501, 2621, 3144, 3287
HapII	CCGG	6 cut(s)	244, 399, 410, 425, 1130, 2216
HgaI	GACGC	2 cut(s)	85, 2528
HhaI	GCGC	5 cut(s)	34, 67, 916, 1028, 2229
Hin6I	GCGC	5 cut(s)	32, 65, 914, 1026, 2227
HinP1I	GCGC	5 cut(s)	32, 65, 914, 1026, 2227
HincII	GTYRAC	4 cut(s)	255, 711, 817, 3300
HindII	GTYRAC	4 cut(s)	255, 711, 817, 3300
HindIII	AAGCTT	4 cut(s)	179, 944, 2325, 2793
HpaI	GTTAAC	1 cut(s)	255
HpaII	CCGG	6 cut(s)	244, 399, 410, 425, 1130, 2216
HphI	GGTGA	6 cut(s)	80, 1246, 1488, 2597, 2996, 3223
Hpy166II	GTNNAC	8 cut(s)	255, 711, 817, 872, 1341, 1550, 3133, 3300
Hpy8I	GTNNAC	8 cut(s)	255, 711, 817, 872, 1341, 1550, 3133, 3300
Hpy99I	CGWCG	1 cut(s)	266
HpyAV	CCTTC	9 cut(s)	79, 209, 248, 1214, 1559, 1894, 2108, 2411, 2694
HpyCH4III	ACNGT	7 cut(s)	382, 795, 1335, 1636, 2649, 3008, 3053
HpyCH4IV	ACGT	4 cut(s)	115, 519, 707, 874
HpySE526I	ACGT	4 cut(s)	115, 519, 707, 874
HspAI	GCGC	5 cut(s)	32, 65, 914, 1026, 2227
Kpn2I	TCCGGA	1 cut(s)	243
KpnI	GGTACC	1 cut(s)	786
Ksp22I	TGATCA	4 cut(s)	699, 2134, 2575, 3097
KspAI	GTTAAC	1 cut(s)	255
LguI	GCTCTTC	1 cut(s)	2188
LmnI	GCTCC	4 cut(s)	59, 602, 1392, 1568
MaeI	CTAG	7 cut(s)	594, 1250, 1767, 1857, 1874, 2057, 2472
MaeII	ACGT	4 cut(s)	115, 519, 707, 874
MbiI	CCGCTC	1 cut(s)	617
MfeI	CAATTG	1 cut(s)	506
MflI	RGATCY	5 cut(s)	2272, 2352, 2394, 2429, 2991
MhlI	GDGCHC	4 cut(s)	928, 1389, 2503, 2813
MlsI	TGGCCA	1 cut(s)	653
MluNI	TGGCCA	1 cut(s)	653
MlyI	GAGTC	2 cut(s)	137, 523
MmeI	TCCRAC	4 cut(s)	129, 1708, 1720, 2349
Mox20I	TGGCCA	1 cut(s)	653
Mph1103I	ATGCAT	1 cut(s)	2717
MroI	TCCGGA	1 cut(s)	243
MroXI	GAANNNNTTC	1 cut(s)	1614
MscI	TGGCCA	1 cut(s)	653
MslI	CAYNNNNRTG	1 cut(s)	1781
Msp20I	TGGCCA	1 cut(s)	653
MspA1I	CMGCKG	3 cut(s)	2201, 2690, 2926
MspCI	CTTAAG	1 cut(s)	1937
MspI	CCGG	6 cut(s)	244, 399, 410, 425, 1130, 2216
MspR9I	CCNGG	3 cut(s)	400, 930, 2021
MunI	CAATTG	1 cut(s)	506
Mva1269I	GAATGC	2 cut(s)	1672, 2390
MvaI	CCWGG	2 cut(s)	930, 2021
MvnI	CGCG	5 cut(s)	41, 65, 261, 916, 1302
NciI	CCSGG	1 cut(s)	400
NcoI	CCATGG	3 cut(s)	556, 1707, 2955
NdeI	CATATG	1 cut(s)	2962
NheI	GCTAGC	1 cut(s)	593
NlaIV	GGNNCC	7 cut(s)	55, 784, 797, 1353, 2157, 2501, 3145
NmeAIII	GCCGAG	4 cut(s)	30, 151, 2917, 3211
NmuCI	GTSAC	2 cut(s)	1494, 3211
NruI	TCGCGA	1 cut(s)	41
NsiI	ATGCAT	1 cut(s)	2717
NspI	RCATGY	2 cut(s)	1843, 2086
PaeR7I	CTCGAG	2 cut(s)	860, 992
PagI	TCATGA	2 cut(s)	1375, 3094
PceI	AGGCCT	1 cut(s)	2621
PciI	ACATGT	1 cut(s)	1839
PciSI	GCTCTTC	1 cut(s)	2188
PctI	GAATGC	2 cut(s)	1672, 2390
PdmI	GAANNNNTTC	1 cut(s)	1614
PfoI	TCCNGGA	1 cut(s)	398
PleI	GAGTC	2 cut(s)	136, 523
PpsI	GAGTC	2 cut(s)	136, 523
PscI	ACATGT	1 cut(s)	1839
PshAI	GACNNNNGTC	1 cut(s)	1336
Psp1406I	AACGTT	1 cut(s)	115
Psp6I	CCWGG	2 cut(s)	928, 2019
PspGI	CCWGG	2 cut(s)	928, 2019
PspN4I	GGNNCC	7 cut(s)	55, 784, 797, 1353, 2157, 2501, 3145
PspOMI	GGGCCC	1 cut(s)	2499
PspPI	GGNCC	4 cut(s)	1352, 2499, 2500, 3143
PspXI	VCTCGAGB	2 cut(s)	860, 992
PstNI	CAGNNNCTG	5 cut(s)	386, 649, 851, 1595, 3268
PsuI	RGATCY	5 cut(s)	2272, 2352, 2394, 2429, 2991
PvuII	CAGCTG	2 cut(s)	2201, 2926
RruI	TCGCGA	1 cut(s)	41
RseI	CAYNNNNRTG	1 cut(s)	1781
SapI	GCTCTTC	1 cut(s)	2188
Sau96I	GGNCC	4 cut(s)	1352, 2499, 2500, 3143
ScaI	AGTACT	2 cut(s)	1458, 1625
SchI	GAGTC	2 cut(s)	137, 523
ScrFI	CCNGG	3 cut(s)	400, 930, 2021
SduI	GDGCHC	4 cut(s)	928, 1389, 2503, 2813
SfcI	CTRYAG	2 cut(s)	1066, 1341
Sfr274I	CTCGAG	2 cut(s)	860, 992
SinI	GGWCC	1 cut(s)	1352
SlaI	CTCGAG	2 cut(s)	860, 992
SmiMI	CAYNNNNRTG	1 cut(s)	1781
SmlI	CTYRAG	6 cut(s)	577, 758, 860, 992, 1937, 2262
SmoI	CTYRAG	6 cut(s)	577, 758, 860, 992, 1937, 2262
SseBI	AGGCCT	1 cut(s)	2621
SsiI	CCGC	9 cut(s)	63, 123, 231, 615, 1392, 1687, 2463, 2690, 2865
SspI	AATATT	3 cut(s)	1491, 2592, 2762
SspMI	CTAG	7 cut(s)	594, 1250, 1767, 1857, 1874, 2057, 2472
StuI	AGGCCT	1 cut(s)	2621
StyD4I	CCNGG	3 cut(s)	398, 928, 2019
StyI	CCWWGG	4 cut(s)	556, 1707, 2126, 2955
TaaI	ACNGT	7 cut(s)	382, 795, 1335, 1636, 2649, 3008, 3053
TaiI	ACGT	4 cut(s)	118, 522, 710, 877
TaqI	TCGA	8 cut(s)	72, 320, 356, 830, 861, 993, 2640, 2821
TaqII	GACCGA	1 cut(s)	728
TatI	WGTACW	5 cut(s)	869, 1456, 1478, 1623, 2785
TauI	GCSGC	3 cut(s)	233, 617, 2868
TscAI	CASTG	6 cut(s)	455, 578, 650, 1474, 1596, 3273
TseFI	GTSAC	2 cut(s)	1494, 3211
Tsp45I	GTSAC	2 cut(s)	1494, 3211
TspGWI	ACGGA	3 cut(s)	426, 677, 1524
TspRI	CASTG	6 cut(s)	455, 578, 650, 1474, 1596, 3273
Vha464I	CTTAAG	1 cut(s)	1937
VpaK11BI	GGWCC	1 cut(s)	1352
XapI	RAATTY	2 cut(s)	2168, 2568
XbaI	TCTAGA	2 cut(s)	1249, 2056
XceI	RCATGY	2 cut(s)	1843, 2086
XhoI	CTCGAG	2 cut(s)	860, 992
XmiI	GTMKAC	2 cut(s)	1340, 3132
XmnI	GAANNNNTTC	1 cut(s)	1614
XspI	CTAG	7 cut(s)	594, 1250, 1767, 1857, 1874, 2057, 2472
ZrmI	AGTACT	2 cut(s)	1458, 1625
Zsp2I	ATGCAT	1 cut(s)	2717

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.