Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000344

Physical Location & Seq

Genomic Coordinates Reverse (-)

447956 .. 458225

Gene Structure 10270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G004500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3348 bp

ATGGCCGACTCGACTCAGCTACAGCATGCCCAACTGGCGACGATTCTCGGCCCCGACCCGGCCCCTTTCCAAACCCTAATCTCCCACCTCATGTCCTCCTCCAACGAGCAGCGATCCCAAGCCGAGCTCCTCTTCAACCTCTGCAAGCAGACCGATCCCGACTCGCTTTCCCTCAAACTCGCCCACCTTCTCCAGTTCTCTCCCGCCCCGGAGGCCCGAGCCATGTCCGCCATTCTCCTCCGCAAGCAGCTCACTCGCGACGACTCGTACCTCTGGCCCCGCCTCTCCCCCACCACCCAATCCAATCTCAAAACCATTCTCTTGACCTGTATTCAGCGCGAGGACACCAAATCCATATCCAAGAAGCTCTGCGACACCATTTCCGAGCTCGCCTCCGGGATTTTGCCTGATAACGCCTGGCCCGAGCTCTTGCCTTTCATGTTCCAATGCGTCTCCTCCGATTCGCCCAAGCTTCAAGAATCGGCGTTTTTGATATTCGCTCAGCTTTCGCAGTACATCGGCGACACCTTGGTGCCGCATATAAAGGAATTGCACTCCGTGTTCTTGCATAGTTTGGGAAACTCGTCAAGCGCCGAAGTGAAGATCGCGGCCTTGAACGCCGTCATCAATTTCATCCAGTGTTTGACGAGCTCTGCCGATAGGGATAGGTTTCAGGACCTGTTGCCGGCGATGATGAGGACGCTGATGGAGGCTTTGAACAACGGGAACGAGGCCACAGCGCAGGAGGCTCTCGAGTTGTTGATCGAATTGGCCGGGACCGAGCCCAGGTTCCTCAGGCGGCAGATTGTGGAGGTGGTCGGGTCTATGCTGCAGATTGCCGAGGCCGAGTCGTTGGAAGAAGGGACCAGGCACTTGGCCATTGAGTTCGTCATCACGCTCGCCGAGGCCAGAGAGCGCGCGCCTGGGATGATGAGGAAGTTGCCGCAGTTTATAAGCCGATTGTTCGCTATTTTGATGAGTATGCTTTTGGATATCCAGGACGATCCCGCATGGAATACAGCAGAGACTGAAGATGAGGAAGCGGGTGAGACCAGTAATTACAGTGTGGGGCAGGAGTGTTTGGATCGGCTTGCTATATCCCTGGGTGGGAATACCATTGTTCCAGTCGCTTCCGAGCAGTTGCCGGCATATTTGGCTGCCCCCGAGTGGCAGAAGCACCATGCTGCGTTGATTGCACTAGCTCAGATTGCCGAAGGTTGCGCTAAGGTAATGATTAAAAATTTAGAGCAAGTGGTGGCAATGGTCTTGAACTCATTTCAAGATCCACATCCTCGTGTAAGGTGGGCAGCTATTAATGCAATTGGGCAGTTGTCTACGGATTTGGGCCCAGATCTGCAAGTTCAATATCATCAGCAGGTGCTCCCAGCATTGGCTGCAGCTATGGATGATTTTCAGAACCCTCGTGTTCAGGCACATGCTGCTTCAGCAGTGCTCAACTTCAGCGAGAATTGTACTCCGGATATTTTAACACCTTATTTGGATGGAGTAGTGAGCAAATTGCTAGTACTTCTGCAGAATGGGAAACAAATGGTGCAAGAGGGAGCCTTGACTGCTTTGGCATCAGTTGCTGATTCATCTCAGGAGCATTTCCAAAAATACTATGATGCAGTTATGCCTTACCTAAAAGCTATCTTGATGAATGCAACTGATAAATCTAATCGTATGCTTCGCGCCAAATCCATGGAGTGCATTAGTTTGGTTGGTATGGCTGTTGGAAAGGATAAATTCAGGGATGATGCTAAGCAGGTCATGGAAGTGTTGATGGCTTTGCAAGGATCTCAAATGGAGACAGATGATCCAACTACAAGTTACATGCTACAAGCATGGGCTAGACTTTGCAAGTGTTTAGGACAAGATTTCCTCCCCTACATGAGTGTTGTAATGCCTCCTTTGCTTCAGTCTGCTCAACTTAAGCCAGATGTAACCATTACATCTGCAGATGACAATAGTGATATTGATGACTCTGATGATGAAAGTATGGAAACAATTACTCTTGGGGATAAACGGATTGGAATCAAGACTAGTGTCCTGGAGGAAAAAGCTACAGCTTGCAATATGCTGTGTTGCTATGCTGATGAGTTGAAAGAAGGATTCTTTCCGTGGATTGATCAGGTTGCCCCAACTTTGGTTCCACTTCTTAAATTTTATTTCCATGAAGAGGTTAGGAAGGCAGCTGTTTCAGCAATGCCGGAGCTACTGCTTTCTGCAAAATTAGCTATAGAGAAAGGGCAAGCTCAAGGTCGTAATGAAACCTATATAAAGCAATTGTCTGACTACATTGTCCCAGCTCTGGTGGAAGCATTACACAAGGAACCTGATACAGAAATATGTGCAAATATATTGGACGCATTAAATGAATGCTTACAGATATCTGGACCACTTTTAGATGAAAGCCAGGTCAGATCCATTGTGGAGGAGATAAAGCTGGTGATAACTGCCAGTTCAAGTAGAAAAAGAGAAAGAGCAGAAAGGACCAAAGCCGAAGATTTTGATGCTGAGGAAGGGGAGCTCATTAAAGAGGAAAATGAACAAGAGGAAGAAGTTTTTGATCAAGTGGGAGAGATCTTGGGAACTTTGATCAAAACGTTTAAAGCCTCTTTCTTGCCTTTCTTTGACGAGCTATCATCATATCTGACACCTATGTGGGCCAAGGATAAAACACCTGAAGAGAGAAGGATTGCAATATGCATCTTTGATGATGTTGCAGAGCAGTGTCGCGAGGCAGCTGTAAAATATTACGACACATTTCTTCCTTTTCTATTGGAGGCTTGCAATGACGATAACCCTGATGTTCGACAGGCAGCTGTATATGGACTTGGTGTCTGTTCAGAGTTTGGCGGGACAGTAATTAAACCTCTTATTGGCGAGGCTCTTTCGAGGCTAAATGTTGTGATTCAGCATCCTAATGCCGTGCAACCGGAAAACCTAATGGCATATGATAATGCCGTTTCTGCTCTAGGAAAAATATGTCAATTTCATCGCGACAGTATTGATGCAGCTCAGGTTATTCCTGCATGGTTGAACTGTTTACCGATTAAAGGTGACTTGATTGAAGCCAAAGTTGTTCATGATCAGCTGTGTTCTATGGTAGAAAGGTCTGACAGGGAACTTTTGGGTCCCAACAATCAGTATCTTCCCAAAATTGTCGCAGTGTTTGCCGAGGTTCTTTGTGCTGGCAAGGATTTAGCAACAGAACAAACTACAAGCCGGATGATAAATCTATTACGGCAGCTTCAGCAGACTTTGCCACCAGCTACCTTGGCCTCCACTTGGTCCTCCTTACAACCCCAGCAACAGCTTGCACTGCAATCTATCCTGTCCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

1116

Amino Acids

123.44

Weight (kDa)

4.71

Isoelectric Point (pI)

48.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19820
fragaria_vesca	FvH4_1g21410 FvH4_1g28300 FvH4_1g28300 FvH4_2g17651 FvH4_3g45470 FvH4_3g45470
malus_domestica	MD00G1158900.v1.1 MD03G1004600.v1.1 MD03G1004700.v1.1 MD05G1225200.v1.1 MD11G1005300.v1.1 MD11G1005800.v1.1
prunus_persica	Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1
pyrus_communis	pycom03g00480 pycom03g00490 pycom03g00500 pycom11g00440 pycom11g00450
rosa_chinensis	RchiOBHm_Chr1g0324711 RchiOBHm_Chr2g0142151 RchiOBHm_Chr2g0142161 RchiOBHm_Chr3g0475691 RchiOBHm_Chr3g0496831 RchiOBHm_Chr4g0399761 RchiOBHm_Chr4g0399771 RchiOBHm_Chr4g0399781 RchiOBHm_Chr4g0419561 RchiOBHm_Chr5g0054221 RchiOBHm_Chr5g0078241 RchiOBHm_Chr5g0083261 RchiOBHm_Chr6g0253081 RchiOBHm_Chr6g0253091 RchiOBHm_Chr6g0253101
rosa_laevigata	RLG00000006894 RLG00000017613 RLG00000022498 RLG00000023521 RLG00000029311 RLG00000034357 RLG00000037024
rosa_multiflora	Rmu_co8031396.1_g000001 Rmu_co8481369.1_g000001 Rmu_sc0000455.1_g000002 Rmu_sc0000810.1_g000007 Rmu_sc0001438.1_g000001 Rmu_sc0001692.1_g000008 Rmu_sc0001692.1_g000009 Rmu_sc0002130.1_g000004 Rmu_sc0002481.1_g000043 Rmu_sc0004932.1_g000025 Rmu_sc0004967.1_g000012 Rmu_sc0006889.1_g000031 Rmu_sc0011792.1_g000006 Rmu_sc0013655.1_g000001 Rmu_sc0036178.1_g000001 Rmu_sc0040082.1_g000001 Rmu_sc0041125.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138150 Rroxscaffold_4G00314380 Rroxscaffold_5G00362400 Rroxscaffold_6G00388660 Rroxscaffold_6G00393970
rosa_rugosa	Rorug02G0091400 Rorug03G0288200 Rorug03G0288200 Rorug05G0483800
rosa_samantha	Rh1AG440500 Rh2DG505100 Rh2DG505200 Rh3AG331800 Rh3BG368400 Rh3CG343100 Rh3CG364700 Rh3DG367800 Rh4BG222300 Rh4CG233300 Rh5AG533200 Rh5BG560500 Rh5CG583200 Rh5DG381000 Rh5DG569800 Rh6AG307400 Rh6AG307500 Rh6AG307600 Rh7AG013900 Rh7AG014000 Rh7AG153300 Rh7AG154100 Rh7AG283000 Rh7AG385300 Rh7AG446100 Rh7AG487800 Rh7CG302200 Rh7DG365100 Rh7DG365200
rosa_wichuraiana	Rw1G008740 Rw2G039350 Rw3G029040 Rw4G018940 Rw4G018950 Rw5G049970 Rw6G002460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	953
AarI	CACCTGC	1 cut(s)	1366
AasI	GACNNNNNNGTC	1 cut(s)	2300
Acc36I	ACCTGC	2 cut(s)	1366, 1756
AccB1I	GGYRCC	1 cut(s)	532
AccI	GTMKAC	1 cut(s)	1334
AccII	CGCG	8 cut(s)	258, 339, 608, 918, 920, 1692, 2739, 3003
AccIII	TCCGGA	1 cut(s)	1477
AclI	AACGTT	1 cut(s)	2606
AclWI	GGATC	8 cut(s)	108, 149, 998, 1092, 1277, 1804, 1811, 2418
AcoI	YGGCCR	3 cut(s)	3, 771, 876
AcsI	RAATTY	3 cut(s)	1240, 1745, 2162
AcuI	CTGAAG	6 cut(s)	1050, 1428, 1444, 1901, 2706, 3239
AdeI	CACNNNGTG	1 cut(s)	559
AfaI	GTAC	4 cut(s)	269, 515, 1474, 1527
AflII	CTTAAG	1 cut(s)	1931
AhdI	GACNNNNNGTC	1 cut(s)	2840
AhlI	ACTAGT	1 cut(s)	2042
AjnI	CCWGG	8 cut(s)	416, 785, 866, 922, 996, 1101, 2049, 2415
AleI	CACNNNNGTG	2 cut(s)	530, 2662
Alw21I	GWGCWC	7 cut(s)	129, 390, 429, 653, 1383, 1455, 2532
Alw26I	GTCTC	4 cut(s)	457, 1019, 1043, 1802
AlwI	GGATC	8 cut(s)	108, 149, 998, 1092, 1277, 1804, 1811, 2418
AlwNI	CAGNNNCTG	3 cut(s)	679, 1028, 1589
Ama87I	CYCGRG	4 cut(s)	216, 422, 752, 1163
Aor13HI	TCCGGA	1 cut(s)	1477
ApaI	GGGCCC	1 cut(s)	1349
ApoI	RAATTY	3 cut(s)	1240, 1745, 2162
AseI	ATTAAT	1 cut(s)	1314
AspLEI	GCGC	8 cut(s)	339, 593, 742, 918, 920, 922, 1223, 1694
AsuC2I	CCSGG	4 cut(s)	59, 209, 397, 775
AsuHPI	GGTGA	3 cut(s)	1058, 2461, 3074
AvaI	CYCGRG	4 cut(s)	216, 422, 752, 1163
AvaII	GGWCC	7 cut(s)	676, 777, 864, 2396, 2493, 3137, 3294
AxyI	CCTNAGG	1 cut(s)	794
BaeGI	GKGCMC	1 cut(s)	1349
BalI	TGGCCA	1 cut(s)	878
BanI	GGYRCC	1 cut(s)	532
BanII	GRGCYC	7 cut(s)	129, 390, 429, 653, 786, 1349, 2532
BauI	CACGAG	2 cut(s)	1293, 1422
Bbv12I	GWGCWC	7 cut(s)	129, 390, 429, 653, 1383, 1455, 2532
BbvCI	CCTCAGC	1 cut(s)	2517
BccI	CCATC	3 cut(s)	700, 1496, 1777
BceAI	ACGGC	4 cut(s)	605, 2915, 2951, 3263
BcgI	CGANNNNNNTGC	2 cut(s)	236, 270
BciT130I	CCWGG	8 cut(s)	418, 787, 868, 924, 998, 1103, 2051, 2417
BclI	TGATCA	4 cut(s)	2128, 2569, 2598, 3091
BcnI	CCSGG	4 cut(s)	59, 209, 397, 775
BcoDI	GTCTC	4 cut(s)	457, 1019, 1043, 1802
BcuI	ACTAGT	1 cut(s)	2042
BfaI	CTAG	5 cut(s)	1199, 1523, 1851, 2043, 2978
BfmI	CTRYAG	7 cut(s)	20, 830, 1395, 1532, 1956, 2064, 2238
BfoI	RGCGCY	1 cut(s)	594
BfrI	CTTAAG	1 cut(s)	1931
BfuAI	ACCTGC	2 cut(s)	1366, 1756
BglI	GCCNNNNNGGC	2 cut(s)	35, 212
BglII	AGATCT	2 cut(s)	1351, 2583
BlpI	GCTNAGC	2 cut(s)	501, 1761
BmcAI	AGTACT	1 cut(s)	1527
Bme18I	GGWCC	7 cut(s)	676, 777, 864, 2396, 2493, 3137, 3294
BmeRI	GACNNNNNGTC	1 cut(s)	2840
BmeT110I	CYCGRG	4 cut(s)	216, 422, 752, 1163
BmsI	GCATC	7 cut(s)	1589, 1615, 1747, 2503, 2718, 2929, 3004
BoxI	GACNNNNGTC	1 cut(s)	2045
BplI	GAGNNNNNCTC	2 cut(s)	377, 409
BpmI	CTGGAG	2 cut(s)	176, 2072
Bpu10I	CCTNAGC	3 cut(s)	1224, 2517, 3021
Bpu1102I	GCTNAGC	2 cut(s)	501, 1761
BpuEI	CTTGAG	1 cut(s)	2241
BpuMI	CCSGG	4 cut(s)	59, 209, 397, 775
BsaBI	GATNNNNATC	2 cut(s)	1287, 2033
BsaI	GGTCTC	1 cut(s)	1043
BsaWI	WCCGGW	2 cut(s)	1477, 2938
Bse118I	RCCGGY	2 cut(s)	685, 1144
Bse1I	ACTGG	6 cut(s)	39, 193, 637, 1053, 1124, 2460
Bse21I	CCTNAGG	1 cut(s)	794
Bse3DI	GCAATG	3 cut(s)	1266, 2211, 2800
Bse8I	GATNNNNATC	2 cut(s)	1287, 2033
BseAI	TCCGGA	1 cut(s)	1477
BseBI	CCWGG	8 cut(s)	418, 787, 868, 924, 998, 1103, 2051, 2417
BseGI	GGATG	8 cut(s)	633, 933, 1288, 1411, 1507, 1759, 2920, 3237
BseJI	GATNNNNATC	2 cut(s)	1287, 2033
BseMI	GCAATG	3 cut(s)	1266, 2211, 2800
BseMII	CTCAG	7 cut(s)	29, 515, 808, 1217, 1613, 2508, 3035
BseNI	ACTGG	6 cut(s)	39, 193, 637, 1053, 1124, 2460
BsePI	GCGCGC	2 cut(s)	916, 918
BseRI	GAGGAG	5 cut(s)	88, 119, 227, 445, 2450
BseSI	GKGCMC	1 cut(s)	1349
BseYI	CCCAGC	3 cut(s)	1384, 2305, 3309
Bsh1236I	CGCG	8 cut(s)	258, 339, 608, 918, 920, 1692, 2739, 3003
BshNI	GGYRCC	1 cut(s)	532
BsiHKAI	GWGCWC	7 cut(s)	129, 390, 429, 653, 1383, 1455, 2532
BsiHKCI	CYCGRG	4 cut(s)	216, 422, 752, 1163
BslFI	GGGAC	5 cut(s)	790, 877, 2288, 2875, 3123
BsmAI	GTCTC	4 cut(s)	457, 1019, 1043, 1802
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	5 cut(s)	790, 877, 2288, 2875, 3123
BsmI	GAATGC	2 cut(s)	1666, 2384
Bso31I	GGTCTC	1 cut(s)	1043
BsoBI	CYCGRG	4 cut(s)	216, 422, 752, 1163
Bsp120I	GGGCCC	1 cut(s)	1345
Bsp1286I	GDGCHC	9 cut(s)	129, 390, 429, 653, 786, 1349, 1383, 1455, 2532
Bsp13I	TCCGGA	1 cut(s)	1477
Bsp1720I	GCTNAGC	2 cut(s)	501, 1761
Bsp19I	CCATGG	1 cut(s)	1701
Bsp68I	TCGCGA	3 cut(s)	258, 2739, 3003
BspCNI	CTCAG	7 cut(s)	28, 514, 807, 1216, 1612, 2509, 3034
BspEI	TCCGGA	1 cut(s)	1477
BspFNI	CGCG	8 cut(s)	258, 339, 608, 918, 920, 1692, 2739, 3003
BspHI	TCATGA	1 cut(s)	3088
BspMAI	CTGCAG	4 cut(s)	834, 1399, 1536, 1960
BspMI	ACCTGC	2 cut(s)	1366, 1756
BspPI	GGATC	8 cut(s)	108, 149, 998, 1092, 1277, 1804, 1811, 2418
BspT107I	GGYRCC	1 cut(s)	532
BspTI	CTTAAG	1 cut(s)	1931
BspTNI	GGTCTC	1 cut(s)	1043
BsrDI	GCAATG	3 cut(s)	1266, 2211, 2800
BsrFI	RCCGGY	2 cut(s)	685, 1144
BsrI	ACTGG	6 cut(s)	39, 193, 637, 1053, 1124, 2460
BssAI	RCCGGY	2 cut(s)	685, 1144
BssHII	GCGCGC	2 cut(s)	916, 918
BssSI	CACGAG	2 cut(s)	1293, 1422
BssT1I	CCWWGG	4 cut(s)	528, 1701, 2670, 3279
Bst2BI	CACGAG	2 cut(s)	1293, 1422
Bst2UI	CCWGG	8 cut(s)	418, 787, 868, 924, 998, 1103, 2051, 2417
Bst4CI	ACNGT	4 cut(s)	1064, 2866, 3008, 3047
Bst6I	CTCTTC	3 cut(s)	137, 2172, 2682
BstAFI	CTTAAG	1 cut(s)	1931
BstAPI	GCANNNNNTGC	5 cut(s)	1394, 1439, 1586, 3176, 3265
BstDEI	CTNAG	9 cut(s)	15, 501, 794, 1203, 1224, 1599, 1761, 2517, 3021
BstDSI	CCRYGG	2 cut(s)	1701, 2120
BstF5I	GGATG	8 cut(s)	633, 933, 1288, 1411, 1507, 1759, 2920, 3237
BstFNI	CGCG	8 cut(s)	258, 339, 608, 918, 920, 1692, 2739, 3003
BstH2I	RGCGCY	1 cut(s)	594
BstHHI	GCGC	8 cut(s)	339, 593, 742, 918, 920, 922, 1223, 1694
BstMAI	GTCTC	4 cut(s)	457, 1019, 1043, 1802
BstNI	CCWGG	8 cut(s)	418, 787, 868, 924, 998, 1103, 2051, 2417
BstNSI	RCATGY	3 cut(s)	29, 1439, 1837
BstPAI	GACNNNNGTC	1 cut(s)	2045
BstSFI	CTRYAG	7 cut(s)	20, 830, 1395, 1532, 1956, 2064, 2238
BstSLI	GKGCMC	1 cut(s)	1349
BstUI	CGCG	8 cut(s)	258, 339, 608, 918, 920, 1692, 2739, 3003
BstX2I	RGATCY	5 cut(s)	1282, 1351, 1796, 2423, 2583
BstXI	CCANNNNNNTGG	2 cut(s)	874, 1702
BstYI	RGATCY	5 cut(s)	1282, 1351, 1796, 2423, 2583
Bsu36I	CCTNAGG	1 cut(s)	794
BtgI	CCRYGG	2 cut(s)	1701, 2120
BtgZI	GCGATG	2 cut(s)	704, 2984
BtsCI	GGATG	8 cut(s)	633, 933, 1288, 1411, 1507, 1759, 2920, 3237
BtsI	GCAGTG	4 cut(s)	1455, 2738, 3177, 3323
BtsIMutI	CAGTG	6 cut(s)	644, 1069, 1455, 2738, 3177, 3323
BtuMI	TCGCGA	3 cut(s)	258, 2739, 3003
BveI	ACCTGC	2 cut(s)	1366, 1756
CaiI	CAGNNNCTG	3 cut(s)	679, 1028, 1589
CciI	TCATGA	1 cut(s)	3088
CfoI	GCGC	8 cut(s)	339, 593, 742, 918, 920, 922, 1223, 1694
Cfr10I	RCCGGY	2 cut(s)	685, 1144
CseI	GACGC	3 cut(s)	439, 709, 2375
Csp6I	GTAC	4 cut(s)	268, 514, 1473, 1526
CviQI	GTAC	4 cut(s)	268, 514, 1473, 1526
DdeI	CTNAG	9 cut(s)	15, 501, 794, 1203, 1224, 1599, 1761, 2517, 3021
DraI	TTTAAA	1 cut(s)	2611
DraIII	CACNNNGTG	1 cut(s)	559
DrdI	GACNNNNNNGTC	1 cut(s)	2300
DriI	GACNNNNNGTC	1 cut(s)	2840
DseDI	GACNNNNNNGTC	1 cut(s)	2300
EaeI	YGGCCR	3 cut(s)	3, 771, 876
Eam1104I	CTCTTC	3 cut(s)	137, 2172, 2682
Eam1105I	GACNNNNNGTC	1 cut(s)	2840
EarI	CTCTTC	3 cut(s)	137, 2172, 2682
EciI	GGCGGA	1 cut(s)	217
Ecl136II	GAGCTC	5 cut(s)	127, 388, 427, 651, 2530
Eco130I	CCWWGG	4 cut(s)	528, 1701, 2670, 3279
Eco24I	GRGCYC	7 cut(s)	129, 390, 429, 653, 786, 1349, 2532
Eco31I	GGTCTC	1 cut(s)	1043
Eco32I	GATATC	2 cut(s)	994, 2391
Eco47I	GGWCC	7 cut(s)	676, 777, 864, 2396, 2493, 3137, 3294
Eco53kI	GAGCTC	5 cut(s)	127, 388, 427, 651, 2530
Eco57I	CTGAAG	6 cut(s)	1050, 1428, 1444, 1901, 2706, 3239
Eco81I	CCTNAGG	1 cut(s)	794
Eco88I	CYCGRG	4 cut(s)	216, 422, 752, 1163
EcoICRI	GAGCTC	5 cut(s)	127, 388, 427, 651, 2530
EcoO109I	RGGNCCY	2 cut(s)	676, 3137
EcoRII	CCWGG	8 cut(s)	416, 785, 866, 922, 996, 1101, 2049, 2415
EcoRV	GATATC	2 cut(s)	994, 2391
EcoT14I	CCWWGG	4 cut(s)	528, 1701, 2670, 3279
EcoT22I	ATGCAT	1 cut(s)	2711
EcoT38I	GRGCYC	7 cut(s)	129, 390, 429, 653, 786, 1349, 2532
ErhI	CCWWGG	4 cut(s)	528, 1701, 2670, 3279
Esp3I	CGTCTC	1 cut(s)	457
FaqI	GGGAC	5 cut(s)	790, 877, 2288, 2875, 3123
FauI	CCCGC	5 cut(s)	211, 287, 1015, 1036, 2852
FauNDI	CATATG	1 cut(s)	2956
FbaI	TGATCA	4 cut(s)	2128, 2569, 2598, 3091
FblI	GTMKAC	1 cut(s)	1334
FokI	GGATG	8 cut(s)	620, 940, 1275, 1418, 1514, 1766, 2907, 3244
FriOI	GRGCYC	7 cut(s)	129, 390, 429, 653, 786, 1349, 2532
FspBI	CTAG	5 cut(s)	1199, 1523, 1851, 2043, 2978
GlaI	GCGC	8 cut(s)	338, 592, 741, 917, 919, 921, 1222, 1693
GsaI	CCCAGC	3 cut(s)	1388, 2309, 3313
GsuI	CTGGAG	2 cut(s)	176, 2072
HaeII	RGCGCY	1 cut(s)	594
HgaI	GACGC	3 cut(s)	439, 709, 2375
HhaI	GCGC	8 cut(s)	339, 593, 742, 918, 920, 922, 1223, 1694
Hin6I	GCGC	8 cut(s)	337, 591, 740, 916, 918, 920, 1221, 1692
HinP1I	GCGC	8 cut(s)	337, 591, 740, 916, 918, 920, 1221, 1692
HindIII	AAGCTT	1 cut(s)	470
HphI	GGTGA	3 cut(s)	1058, 2461, 3074
Hpy166II	GTNNAC	2 cut(s)	1335, 3050
Hpy8I	GTNNAC	2 cut(s)	1335, 3050
Hpy99I	CGWCG	2 cut(s)	43, 263
HpyAV	CCTTC	7 cut(s)	197, 854, 1208, 2102, 2182, 2516, 2688
HpyCH4III	ACNGT	4 cut(s)	1064, 2866, 3008, 3047
HpyCH4IV	ACGT	1 cut(s)	2606
HpyF3I	CTNAG	9 cut(s)	15, 501, 794, 1203, 1224, 1599, 1761, 2517, 3021
HpySE526I	ACGT	1 cut(s)	2606
HspAI	GCGC	8 cut(s)	337, 591, 740, 916, 918, 920, 1221, 1692
KflI	GGGWCCC	1 cut(s)	3137
Kpn2I	TCCGGA	1 cut(s)	1477
KroI	GCCGGC	2 cut(s)	685, 1144
KroNI	GCCGGC	2 cut(s)	687, 1146
Ksp22I	TGATCA	4 cut(s)	2128, 2569, 2598, 3091
LmnI	GCTCC	6 cut(s)	132, 1386, 1562, 1603, 2212, 2527
LweI	GCATC	7 cut(s)	1589, 1615, 1747, 2503, 2718, 2929, 3004
MaeI	CTAG	5 cut(s)	1199, 1523, 1851, 2043, 2978
MaeII	ACGT	1 cut(s)	2606
MaeIII	GTNAC	3 cut(s)	1829, 1942, 3062
MfeI	CAATTG	2 cut(s)	1320, 2285
MflI	RGATCY	5 cut(s)	1282, 1351, 1796, 2423, 2583
MhlI	GDGCHC	9 cut(s)	129, 390, 429, 653, 786, 1349, 1383, 1455, 2532
MlsI	TGGCCA	1 cut(s)	878
MluNI	TGGCCA	1 cut(s)	878
MlyI	GAGTC	6 cut(s)	2, 7, 155, 257, 857, 1976
MmeI	TCCRAC	4 cut(s)	126, 834, 1714, 1844
Mox20I	TGGCCA	1 cut(s)	878
Mph1103I	ATGCAT	1 cut(s)	2711
MroI	TCCGGA	1 cut(s)	1477
MroNI	GCCGGC	2 cut(s)	685, 1144
MscI	TGGCCA	1 cut(s)	878
MslI	CAYNNNNRTG	5 cut(s)	530, 1293, 1775, 2662, 2925
Msp20I	TGGCCA	1 cut(s)	878
MspA1I	CMGCKG	4 cut(s)	2195, 2747, 2825, 3097
MspCI	CTTAAG	1 cut(s)	1931
MunI	CAATTG	2 cut(s)	1320, 2285
Mva1269I	GAATGC	2 cut(s)	1666, 2384
MvaI	CCWGG	8 cut(s)	418, 787, 868, 924, 998, 1103, 2051, 2417
MvnI	CGCG	8 cut(s)	258, 339, 608, 918, 920, 1692, 2739, 3003
NaeI	GCCGGC	2 cut(s)	687, 1146
NciI	CCSGG	4 cut(s)	59, 209, 397, 775
NcoI	CCATGG	1 cut(s)	1701
NdeI	CATATG	1 cut(s)	2956
NgoMIV	GCCGGC	2 cut(s)	685, 1144
NmeAIII	GCCGAG	6 cut(s)	27, 148, 865, 871, 928, 3205
NmuCI	GTSAC	1 cut(s)	3062
NruI	TCGCGA	3 cut(s)	258, 2739, 3003
NsiI	ATGCAT	1 cut(s)	2711
NspI	RCATGY	3 cut(s)	29, 1439, 1837
OliI	CACNNNNGTG	2 cut(s)	530, 2662
PaeI	GCATGC	1 cut(s)	29
PaeR7I	CTCGAG	1 cut(s)	752
PagI	TCATGA	1 cut(s)	3088
PaqCI	CACCTGC	1 cut(s)	1366
PasI	CCCWGGG	1 cut(s)	1102
PauI	GCGCGC	2 cut(s)	916, 918
PcsI	WCGNNNNNNNCGW	1 cut(s)	420
PctI	GAATGC	2 cut(s)	1666, 2384
PdiI	GCCGGC	2 cut(s)	687, 1146
PfeI	GAWTC	7 cut(s)	43, 461, 479, 1592, 2034, 2112, 2914
PfoI	TCCNGGA	3 cut(s)	395, 996, 2049
PleI	GAGTC	6 cut(s)	2, 7, 155, 257, 856, 1976
PpsI	GAGTC	6 cut(s)	2, 7, 155, 257, 856, 1976
PpuMI	RGGWCCY	2 cut(s)	676, 3137
PshAI	GACNNNNGTC	1 cut(s)	2045
PshBI	ATTAAT	1 cut(s)	1314
PsiI	TTATAA	1 cut(s)	953
Psp124BI	GAGCTC	5 cut(s)	129, 390, 429, 653, 2532
Psp1406I	AACGTT	1 cut(s)	2606
Psp5II	RGGWCCY	2 cut(s)	676, 3137
Psp6I	CCWGG	8 cut(s)	416, 785, 866, 922, 996, 1101, 2049, 2415
PspFI	CCCAGC	3 cut(s)	1384, 2305, 3309
PspGI	CCWGG	8 cut(s)	416, 785, 866, 922, 996, 1101, 2049, 2415
PspOMI	GGGCCC	1 cut(s)	1345
PspPPI	RGGWCCY	2 cut(s)	676, 3137
PstI	CTGCAG	4 cut(s)	834, 1399, 1536, 1960
PstNI	CAGNNNCTG	3 cut(s)	679, 1028, 1589
PsuI	RGATCY	5 cut(s)	1282, 1351, 1796, 2423, 2583
PteI	GCGCGC	2 cut(s)	916, 918
PvuII	CAGCTG	4 cut(s)	2195, 2747, 2825, 3097
RruI	TCGCGA	3 cut(s)	258, 2739, 3003
RsaI	GTAC	4 cut(s)	269, 515, 1474, 1527
RsaNI	GTAC	4 cut(s)	268, 514, 1473, 1526
RseI	CAYNNNNRTG	5 cut(s)	530, 1293, 1775, 2662, 2925
SacI	GAGCTC	5 cut(s)	129, 390, 429, 653, 2532
ScaI	AGTACT	1 cut(s)	1527
SchI	GAGTC	6 cut(s)	2, 7, 155, 257, 857, 1976
SduI	GDGCHC	9 cut(s)	129, 390, 429, 653, 786, 1349, 1383, 1455, 2532
SfaNI	GCATC	7 cut(s)	1589, 1615, 1747, 2503, 2718, 2929, 3004
SfcI	CTRYAG	7 cut(s)	20, 830, 1395, 1532, 1956, 2064, 2238
Sfr274I	CTCGAG	1 cut(s)	752
SinI	GGWCC	7 cut(s)	676, 777, 864, 2396, 2493, 3137, 3294
SlaI	CTCGAG	1 cut(s)	752
SmiMI	CAYNNNNRTG	5 cut(s)	530, 1293, 1775, 2662, 2925
SmlI	CTYRAG	3 cut(s)	752, 1931, 2256
SmoI	CTYRAG	3 cut(s)	752, 1931, 2256
SpeI	ACTAGT	1 cut(s)	2042
SphI	GCATGC	1 cut(s)	29
SspI	AATATT	1 cut(s)	2756
SspMI	CTAG	5 cut(s)	1199, 1523, 1851, 2043, 2978
SstI	GAGCTC	5 cut(s)	129, 390, 429, 653, 2532
StyI	CCWWGG	4 cut(s)	528, 1701, 2670, 3279
TaaI	ACNGT	4 cut(s)	1064, 2866, 3008, 3047
TaiI	ACGT	1 cut(s)	2609
TaqI	TCGA	5 cut(s)	11, 753, 765, 2815, 2897
TaqII	GACCGA	2 cut(s)	167, 794
TatI	WGTACW	3 cut(s)	513, 1472, 1525
TauI	GCSGC	4 cut(s)	538, 611, 802, 946
TfiI	GAWTC	7 cut(s)	43, 461, 479, 1592, 2034, 2112, 2914
TscAI	CASTG	6 cut(s)	644, 1069, 1455, 2738, 3177, 3330
TseFI	GTSAC	1 cut(s)	3062
Tsp45I	GTSAC	1 cut(s)	3062
TspGWI	ACGGA	4 cut(s)	547, 1352, 2041, 2109
TspRI	CASTG	6 cut(s)	644, 1069, 1455, 2738, 3177, 3330
Vha464I	CTTAAG	1 cut(s)	1931
VpaK11BI	GGWCC	7 cut(s)	676, 777, 864, 2396, 2493, 3137, 3294
VspI	ATTAAT	1 cut(s)	1314
XapI	RAATTY	3 cut(s)	1240, 1745, 2162
XceI	RCATGY	3 cut(s)	29, 1439, 1837
XhoI	CTCGAG	1 cut(s)	752
XmiI	GTMKAC	1 cut(s)	1334
XspI	CTAG	5 cut(s)	1199, 1523, 1851, 2043, 2978
ZrmI	AGTACT	1 cut(s)	1527
Zsp2I	ATGCAT	1 cut(s)	2711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.