Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0000344

Physical Location & Seq

Genomic Coordinates Reverse (-)

343363 .. 347465

Gene Structure 4103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g00450.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGCCGAGTCGACTCAGCTACAGCAAGCCCAACTGGCGACGATTCTCGGTCCCGACCCCGCCCCTTTCCAAACTTTAATCGCCCACCTCATGTCCTCCGCCAATGAGCAGCGCTCCCAGGCCGAGCTCCTCTTCAACCTCTGCAAGCAGACCGATCCCGACTCCCTCTGCCTCAAACTCGCTCACCTCCTCCAGTTCTCTCCCGCCGCCGAGGCCCGAGCAATGTCCGCCATTCTCCTCCGCAAGCAGCTCACTCGCGACGACTCCTACCTCTGGCCCCGATTGAATCCGACTACCCAATCCTCGCTGAAGACGATTCTCCTGGCCTGTATTCAGCAGGTGGATAACAAATCCATCTCCAAGAAGCTCTGCGATACAATTTCCGAGCTCGCCTCCGGAATCCTGCCCGATAACGGGTGGCCGGAGCTCCTGCCGTTCATGTTCCAATGCGTCTCGTCCGATTCGCCCAAGCTTCAAGAATCGGCGTTTTTGATATTTGCTCAGTTATCGCAGTATATCGGCGACATCATGGTGCCGCACATAAAGGAGTTGCACGCCGTGTTCTTGCACAGCCTGGGGAACTCGCCGAGCCCTGACGTTAAAATCGCAGCTTTGAACGCCGTCATTAATTTCATCCAGTGTTTGACAAGCTCTGGCGATAGGGACAGGTTTCAGGACCTGTTGCCGGCGATGATGAAGACGCTGATGGAGTCTTTGAACAACGGGAACGAGGCCACAGCACAGGACGCTCTTGAATTGTTGATTGAATTGGCAGGGACTGAGCCGAGGTTCCTCAGGCGGCAGATTGTGGAGGTTGTTGGGGCAATGCTACAAATTGCCGAGGCGGACACCTTGGAAGAAGCAACCCGGCACCTGGCAATTGAGTTTGTAATCACCCTTGCTGAGGCCAGGGAACGTGCTCCAGGGATGATGAGAAAGTTGCCACAGTTCATAAGCCGATTGTTTGCCATTTTGATGAGGATGCTTCTGGATATTGAGGACGAAGCCTCATGGCATACAGCTGAAAGTGAAGATGAGGATGCGGGTGAGACTGGTAATTACAGTGTTGGGCAGGAGTGTTTAGATAGGCTTGCCATATCTCTGGGTGGGAATACCATTGTTCCCGTGGCGTCTGAGCAGTTGCCCACTTATTTGGCTGCCCCTGAGTGGCAGAAGCACCAAGCTGCTTTAATTGCTCTAGCTCAAATTGCAGAGGGTTGTGGCAAGGTAATGATTAAAAATTTGGAGCAAGTGGTAGCAATGGTCTTGAACTCATTTCAAGATCGACACCCTCGTGTAAGGTGGGCAGCGATTAATGCAATTGGGCAGTTGTCTACAGATTTGGGTCCCGATCTGCAAGTTCAATATCACCAAAGGGTGCTCCCGGCATTGGCTGCAGCTATGGATGATTTTCAGAATCCCCGTGTTCAGGCACATGCTGCTTCAGCATTGCTCAACTTCAGTGAGAATTGTACTCCGGATATTTTGACACCTTATTTGGATGGAGTAGTGAGCAAATTGCTTGTACTTCTGCAGAATGGCAAACAAATGGTGCAAGAGGGAGCCCTTACTGCTTTAGCATCTGTTGCCGATTCATCTCAGGAGCATTTCCAAAAATACTATGATGCAGTTATGCCTTACCTGAAAGCTATCTTGGTGAATGCAACTGATAAGTCTAACCGCATGCTTCGTGCGAAATCGATGGAGTGCATTAGCTTGGTTGGAATGGCTGTTGGAAAGGATAAGTTTAGGGATGATGCGAAGCAGGTCATGGAAGTGCTGATGGCTTTACAAGGATCTGGAATGGAGGCAGATCGATCCAACTACAAGTTACATGCTACAGGCATGGGCAAGACTCTGCAAGTGCTTAGGACAAGATTTCCTCCCCTACATGAGTGTTGTAATGCCTCCTTTGCTTCAGTCTGCTCAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

645

Amino Acids

70.86

Weight (kDa)

5.25

Isoelectric Point (pI)

44.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19820
fragaria_vesca	FvH4_1g21410 FvH4_1g28300 FvH4_1g28300 FvH4_2g17651 FvH4_3g45470 FvH4_3g45470
malus_domestica	MD00G1158900.v1.1 MD03G1004600.v1.1 MD03G1004700.v1.1 MD05G1225200.v1.1 MD11G1005300.v1.1 MD11G1005800.v1.1
prunus_persica	Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1
pyrus_communis	pycom03g00480 pycom03g00490 pycom03g00500 pycom11g00440 pycom11g00450
rosa_chinensis	RchiOBHm_Chr1g0324711 RchiOBHm_Chr2g0142151 RchiOBHm_Chr2g0142161 RchiOBHm_Chr3g0475691 RchiOBHm_Chr3g0496831 RchiOBHm_Chr4g0399761 RchiOBHm_Chr4g0399771 RchiOBHm_Chr4g0399781 RchiOBHm_Chr4g0419561 RchiOBHm_Chr5g0054221 RchiOBHm_Chr5g0078241 RchiOBHm_Chr5g0083261 RchiOBHm_Chr6g0253081 RchiOBHm_Chr6g0253091 RchiOBHm_Chr6g0253101
rosa_laevigata	RLG00000006894 RLG00000017613 RLG00000022498 RLG00000023521 RLG00000029311 RLG00000034357 RLG00000037024
rosa_multiflora	Rmu_co8031396.1_g000001 Rmu_co8481369.1_g000001 Rmu_sc0000455.1_g000002 Rmu_sc0000810.1_g000007 Rmu_sc0001438.1_g000001 Rmu_sc0001692.1_g000008 Rmu_sc0001692.1_g000009 Rmu_sc0002130.1_g000004 Rmu_sc0002481.1_g000043 Rmu_sc0004932.1_g000025 Rmu_sc0004967.1_g000012 Rmu_sc0006889.1_g000031 Rmu_sc0011792.1_g000006 Rmu_sc0013655.1_g000001 Rmu_sc0036178.1_g000001 Rmu_sc0040082.1_g000001 Rmu_sc0041125.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138150 Rroxscaffold_4G00314380 Rroxscaffold_5G00362400 Rroxscaffold_6G00388660 Rroxscaffold_6G00393970
rosa_rugosa	Rorug02G0091400 Rorug03G0288200 Rorug03G0288200 Rorug05G0483800
rosa_samantha	Rh1AG440500 Rh2DG505100 Rh2DG505200 Rh3AG331800 Rh3BG368400 Rh3CG343100 Rh3CG364700 Rh3DG367800 Rh4BG222300 Rh4CG233300 Rh5AG533200 Rh5BG560500 Rh5CG583200 Rh5DG381000 Rh5DG569800 Rh6AG307400 Rh6AG307500 Rh6AG307600 Rh7AG013900 Rh7AG014000 Rh7AG153300 Rh7AG154100 Rh7AG283000 Rh7AG385300 Rh7AG446100 Rh7AG487800 Rh7CG302200 Rh7DG365100 Rh7DG365200
rosa_wichuraiana	Rw1G008740 Rw2G039350 Rw3G029040 Rw4G018940 Rw4G018950 Rw5G049970 Rw6G002460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	328
Acc36I	ACCTGC	2 cut(s)	328, 1756
AccB1I	GGYRCC	2 cut(s)	532, 870
AccI	GTMKAC	2 cut(s)	11, 1334
AccII	CGCG	1 cut(s)	258
AccIII	TCCGGA	2 cut(s)	395, 1477
AclWI	GGATC	3 cut(s)	149, 1804, 1812
AcoI	YGGCCR	2 cut(s)	3, 419
AcsI	RAATTY	1 cut(s)	1240
AcuI	CTGAAG	4 cut(s)	329, 1428, 1444, 1902
AcyI	GRCGYC	1 cut(s)	1130
AdeI	CACNNNGTG	1 cut(s)	559
AfaI	GTAC	2 cut(s)	1474, 1527
AfeI	AGCGCT	1 cut(s)	113
AfiI	CCNNNNNNNGG	9 cut(s)	273, 413, 414, 685, 874, 904, 1167, 1390, 1429
AjnI	CCWGG	6 cut(s)	117, 321, 573, 873, 908, 922
AjuI	GAANNNNNNNTTGG	2 cut(s)	1637, 1669
AleI	CACNNNNGTG	1 cut(s)	1293
Alw21I	GWGCWC	5 cut(s)	129, 390, 429, 922, 1383
Alw26I	GTCTC	2 cut(s)	457, 1043
AlwI	GGATC	3 cut(s)	149, 1804, 1812
AlwNI	CAGNNNCTG	2 cut(s)	679, 779
Ama87I	CYCGRG	1 cut(s)	216
Aor13HI	TCCGGA	2 cut(s)	395, 1477
Aor51HI	AGCGCT	1 cut(s)	113
AoxI	GGCC	8 cut(s)	3, 120, 213, 275, 324, 419, 732, 906
ApeKI	GCWGC	9 cut(s)	109, 247, 608, 1157, 1184, 1307, 1394, 1397, 1439
ApoI	RAATTY	1 cut(s)	1240
ArsI	GACNNNNNNTTYG	2 cut(s)	1480, 1512
AseI	ATTAAT	2 cut(s)	627, 1314
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	5 cut(s)	50, 214, 276, 676, 1346
AsuC2I	CCSGG	2 cut(s)	868, 1385
AsuHPI	GGTGA	5 cut(s)	176, 886, 1058, 1361, 1669
AvaI	CYCGRG	1 cut(s)	216
AvaII	GGWCC	3 cut(s)	50, 676, 1346
AxyI	CCTNAGG	1 cut(s)	794
BanI	GGYRCC	2 cut(s)	532, 870
BanII	GRGCYC	5 cut(s)	129, 390, 429, 593, 1567
BauI	CACGAG	1 cut(s)	1293
BbsI	GAAGAC	2 cut(s)	317, 704
Bbv12I	GWGCWC	5 cut(s)	129, 390, 429, 922, 1383
BbvCI	CCTCAGC	1 cut(s)	903
BbvI	GCAGC	9 cut(s)	121, 259, 620, 1144, 1171, 1319, 1381, 1409, 1426
BccI	CCATC	5 cut(s)	362, 700, 1496, 1696, 1777
BceAI	ACGGC	3 cut(s)	418, 542, 605
BcgI	CGANNNNNNTGC	2 cut(s)	236, 270
BciT130I	CCWGG	6 cut(s)	119, 323, 575, 875, 910, 924
BcnI	CCSGG	2 cut(s)	868, 1385
BcoDI	GTCTC	2 cut(s)	457, 1043
BfaI	CTAG	1 cut(s)	1199
BfmI	CTRYAG	5 cut(s)	20, 1335, 1395, 1532, 1839
BfoI	RGCGCY	1 cut(s)	115
BfuAI	ACCTGC	2 cut(s)	328, 1756
BglI	GCCNNNNNGGC	2 cut(s)	35, 212
Bme1390I	CCNGG	8 cut(s)	119, 323, 575, 868, 875, 910, 924, 1385
Bme18I	GGWCC	3 cut(s)	50, 676, 1346
BmeT110I	CYCGRG	1 cut(s)	216
BmgT120I	GGNCC	5 cut(s)	50, 214, 276, 676, 1346
BmiI	GGNNCC	8 cut(s)	52, 278, 534, 791, 872, 1347, 1348, 1564
BmrFI	CCNGG	8 cut(s)	119, 323, 575, 868, 875, 910, 924, 1385
BmsI	GCATC	5 cut(s)	972, 1030, 1589, 1615, 1747
BpiI	GAAGAC	2 cut(s)	317, 704
BplI	GAGNNNNNCTC	4 cut(s)	98, 130, 377, 409
BpmI	CTGGAG	2 cut(s)	176, 906
Bpu10I	CCTNAGC	2 cut(s)	903, 1868
BpuMI	CCSGG	2 cut(s)	868, 1385
Bsa29I	ATCGAT	2 cut(s)	1700, 1816
BsaHI	GRCGYC	1 cut(s)	1130
BsaJI	CCNNGG	9 cut(s)	117, 210, 574, 785, 840, 852, 909, 923, 1125
BsaWI	WCCGGW	2 cut(s)	395, 1477
Bsc4I	CCNNNNNNNGG	9 cut(s)	273, 413, 414, 685, 874, 904, 1167, 1390, 1429
Bse118I	RCCGGY	1 cut(s)	685
Bse1I	ACTGG	4 cut(s)	39, 193, 637, 1057
Bse21I	CCTNAGG	1 cut(s)	794
Bse3DI	GCAATG	4 cut(s)	228, 831, 1266, 1448
BseAI	TCCGGA	2 cut(s)	395, 1477
BseBI	CCWGG	6 cut(s)	119, 323, 575, 875, 910, 924
BseCI	ATCGAT	2 cut(s)	1700, 1816
BseDI	CCNNGG	9 cut(s)	117, 210, 574, 785, 840, 852, 909, 923, 1125
BseGI	GGATG	7 cut(s)	633, 933, 987, 1045, 1411, 1507, 1759
BseLI	CCNNNNNNNGG	9 cut(s)	273, 413, 414, 685, 874, 904, 1167, 1390, 1429
BseMI	GCAATG	4 cut(s)	228, 831, 1266, 1448
BseMII	CTCAG	8 cut(s)	29, 515, 771, 808, 894, 1125, 1155, 1613
BseNI	ACTGG	4 cut(s)	39, 193, 637, 1057
BseRI	GAGGAG	3 cut(s)	119, 179, 227
BseXI	GCAGC	9 cut(s)	121, 259, 620, 1144, 1171, 1319, 1381, 1409, 1426
Bsh1236I	CGCG	1 cut(s)	258
BshFI	GGCC	8 cut(s)	5, 122, 215, 277, 326, 421, 734, 908
BshNI	GGYRCC	2 cut(s)	532, 870
BshVI	ATCGAT	2 cut(s)	1700, 1816
BsiHKAI	GWGCWC	5 cut(s)	129, 390, 429, 922, 1383
BsiHKCI	CYCGRG	1 cut(s)	216
BsiSI	CCGG	6 cut(s)	396, 422, 686, 868, 1385, 1478
BslFI	GGGAC	4 cut(s)	36, 677, 790, 1332
BslI	CCNNNNNNNGG	9 cut(s)	273, 413, 414, 685, 874, 904, 1167, 1390, 1429
BsmAI	GTCTC	2 cut(s)	457, 1043
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	4 cut(s)	36, 677, 790, 1332
BsmI	GAATGC	1 cut(s)	1666
BsnI	GGCC	8 cut(s)	5, 122, 215, 277, 326, 421, 734, 908
BsoBI	CYCGRG	1 cut(s)	216
Bsp1286I	GDGCHC	7 cut(s)	129, 390, 429, 593, 922, 1383, 1567
Bsp13I	TCCGGA	2 cut(s)	395, 1477
Bsp143I	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
Bsp68I	TCGCGA	1 cut(s)	258
BspANI	GGCC	8 cut(s)	5, 122, 215, 277, 326, 421, 734, 908
BspCNI	CTCAG	8 cut(s)	28, 514, 772, 807, 895, 1126, 1156, 1612
BspDI	ATCGAT	2 cut(s)	1700, 1816
BspEI	TCCGGA	2 cut(s)	395, 1477
BspFNI	CGCG	1 cut(s)	258
BspLI	GGNNCC	8 cut(s)	52, 278, 534, 791, 872, 1347, 1348, 1564
BspMAI	CTGCAG	2 cut(s)	1399, 1536
BspMI	ACCTGC	2 cut(s)	328, 1756
BspPI	GGATC	3 cut(s)	149, 1804, 1812
BspT107I	GGYRCC	2 cut(s)	532, 870
BsrDI	GCAATG	4 cut(s)	228, 831, 1266, 1448
BsrFI	RCCGGY	1 cut(s)	685
BsrI	ACTGG	4 cut(s)	39, 193, 637, 1057
BssAI	RCCGGY	1 cut(s)	685
BssECI	CCNNGG	9 cut(s)	117, 210, 574, 785, 840, 852, 909, 923, 1125
BssMI	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
BssNI	GRCGYC	1 cut(s)	1130
BssSI	CACGAG	1 cut(s)	1293
BssT1I	CCWWGG	1 cut(s)	852
Bst2BI	CACGAG	1 cut(s)	1293
Bst2UI	CCWGG	6 cut(s)	119, 323, 575, 875, 910, 924
Bst4CI	ACNGT	2 cut(s)	948, 1064
Bst6I	CTCTTC	1 cut(s)	137
BstACI	GRCGYC	1 cut(s)	1130
BstAPI	GCANNNNNTGC	3 cut(s)	1394, 1439, 1586
BstC8I	GCNNGC	8 cut(s)	27, 146, 245, 390, 555, 687, 1092, 1685
BstDEI	CTNAG	9 cut(s)	15, 501, 780, 794, 903, 1134, 1164, 1599, 1868
BstDSI	CCRYGG	1 cut(s)	1125
BstENI	CCTNNNNNAGG	1 cut(s)	902
BstF5I	GGATG	7 cut(s)	633, 933, 987, 1045, 1411, 1507, 1759
BstFNI	CGCG	1 cut(s)	258
BstH2I	RGCGCY	1 cut(s)	115
BstHHI	GCGC	1 cut(s)	114
BstKTI	GATC	6 cut(s)	157, 1285, 1354, 1799, 1816, 1820
BstMAI	GTCTC	2 cut(s)	457, 1043
BstMBI	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
BstNI	CCWGG	6 cut(s)	119, 323, 575, 875, 910, 924
BstNSI	RCATGY	3 cut(s)	1439, 1687, 1838
BstSCI	CCNGG	8 cut(s)	117, 321, 573, 866, 873, 908, 922, 1383
BstSFI	CTRYAG	5 cut(s)	20, 1335, 1395, 1532, 1839
BstUI	CGCG	1 cut(s)	258
BstV1I	GCAGC	9 cut(s)	121, 259, 620, 1144, 1171, 1319, 1381, 1409, 1426
BstV2I	GAAGAC	2 cut(s)	317, 704
BstX2I	RGATCY	1 cut(s)	1796
BstXI	CCANNNNNNTGG	2 cut(s)	1102, 1153
BstYI	RGATCY	1 cut(s)	1796
Bsu15I	ATCGAT	2 cut(s)	1700, 1816
Bsu36I	CCTNAGG	1 cut(s)	794
BsuRI	GGCC	8 cut(s)	5, 122, 215, 277, 326, 421, 734, 908
BsuTUI	ATCGAT	2 cut(s)	1700, 1816
BtgI	CCRYGG	1 cut(s)	1125
BtgZI	GCGATG	1 cut(s)	704
BtsCI	GGATG	7 cut(s)	633, 933, 987, 1045, 1411, 1507, 1759
BtsIMutI	CAGTG	3 cut(s)	644, 1069, 1468
BtuMI	TCGCGA	1 cut(s)	258
BveI	ACCTGC	2 cut(s)	328, 1756
Cac8I	GCNNGC	8 cut(s)	27, 146, 245, 390, 555, 687, 1092, 1685
CaiI	CAGNNNCTG	2 cut(s)	679, 779
CfoI	GCGC	1 cut(s)	114
Cfr10I	RCCGGY	1 cut(s)	685
Cfr13I	GGNCC	5 cut(s)	50, 214, 276, 676, 1346
ClaI	ATCGAT	2 cut(s)	1700, 1816
CseI	GACGC	4 cut(s)	439, 709, 755, 1119
Csp6I	GTAC	2 cut(s)	1473, 1526
CviQI	GTAC	2 cut(s)	1473, 1526
DdeI	CTNAG	9 cut(s)	15, 501, 780, 794, 903, 1134, 1164, 1599, 1868
DpnI	GATC	6 cut(s)	156, 1284, 1353, 1798, 1815, 1819
DpnII	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
DraIII	CACNNNGTG	1 cut(s)	559
EaeI	YGGCCR	2 cut(s)	3, 419
Eam1104I	CTCTTC	1 cut(s)	137
EarI	CTCTTC	1 cut(s)	137
EciI	GGCGGA	3 cut(s)	88, 217, 860
Ecl136II	GAGCTC	3 cut(s)	127, 388, 427
Eco130I	CCWWGG	1 cut(s)	852
Eco24I	GRGCYC	5 cut(s)	129, 390, 429, 593, 1567
Eco47I	GGWCC	3 cut(s)	50, 676, 1346
Eco47III	AGCGCT	1 cut(s)	113
Eco53kI	GAGCTC	3 cut(s)	127, 388, 427
Eco57I	CTGAAG	4 cut(s)	329, 1428, 1444, 1902
Eco81I	CCTNAGG	1 cut(s)	794
Eco88I	CYCGRG	1 cut(s)	216
EcoICRI	GAGCTC	3 cut(s)	127, 388, 427
EcoNI	CCTNNNNNAGG	1 cut(s)	902
EcoO109I	RGGNCCY	2 cut(s)	676, 1346
EcoRII	CCWGG	6 cut(s)	117, 321, 573, 873, 908, 922
EcoT14I	CCWWGG	1 cut(s)	852
EcoT38I	GRGCYC	5 cut(s)	129, 390, 429, 593, 1567
ErhI	CCWWGG	1 cut(s)	852
Esp3I	CGTCTC	1 cut(s)	457
FaqI	GGGAC	4 cut(s)	36, 677, 790, 1332
FauI	CCCGC	3 cut(s)	67, 211, 1036
FblI	GTMKAC	2 cut(s)	11, 1334
FokI	GGATG	7 cut(s)	620, 940, 994, 1052, 1418, 1514, 1766
FriOI	GRGCYC	5 cut(s)	129, 390, 429, 593, 1567
FspBI	CTAG	1 cut(s)	1199
GlaI	GCGC	1 cut(s)	113
GsuI	CTGGAG	2 cut(s)	176, 906
HaeII	RGCGCY	1 cut(s)	115
HaeIII	GGCC	8 cut(s)	5, 122, 215, 277, 326, 421, 734, 908
HapII	CCGG	6 cut(s)	396, 422, 686, 868, 1385, 1478
HgaI	GACGC	4 cut(s)	439, 709, 755, 1119
HhaI	GCGC	1 cut(s)	114
Hin1I	GRCGYC	1 cut(s)	1130
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	1 cut(s)	470
HpaII	CCGG	6 cut(s)	396, 422, 686, 868, 1385, 1478
HphI	GGTGA	5 cut(s)	176, 886, 1058, 1361, 1669
Hpy166II	GTNNAC	2 cut(s)	12, 1335
Hpy188I	TCNGA	5 cut(s)	291, 385, 460, 1135, 1416
Hpy8I	GTNNAC	2 cut(s)	12, 1335
Hpy99I	CGWCG	2 cut(s)	43, 263
HpyCH4III	ACNGT	2 cut(s)	948, 1064
HpyCH4IV	ACGT	2 cut(s)	597, 916
HpyF3I	CTNAG	9 cut(s)	15, 501, 780, 794, 903, 1134, 1164, 1599, 1868
HpySE526I	ACGT	2 cut(s)	597, 916
Hsp92I	GRCGYC	1 cut(s)	1130
HspAI	GCGC	1 cut(s)	112
KflI	GGGWCCC	1 cut(s)	1346
Kpn2I	TCCGGA	2 cut(s)	395, 1477
KroI	GCCGGC	1 cut(s)	685
KroNI	GCCGGC	1 cut(s)	687
Kzo9I	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
LmnI	GCTCC	9 cut(s)	119, 132, 424, 432, 925, 1246, 1386, 1562, 1603
Lsp1109I	GCAGC	9 cut(s)	121, 259, 620, 1144, 1171, 1319, 1381, 1409, 1426
LweI	GCATC	5 cut(s)	972, 1030, 1589, 1615, 1747
MaeI	CTAG	1 cut(s)	1199
MaeII	ACGT	2 cut(s)	597, 916
MaeIII	GTNAC	1 cut(s)	1830
MalI	GATC	6 cut(s)	156, 1284, 1353, 1798, 1815, 1819
MboI	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
MboII	GAAGA	5 cut(s)	124, 322, 709, 869, 1043
MfeI	CAATTG	2 cut(s)	879, 1320
MflI	RGATCY	1 cut(s)	1796
MhlI	GDGCHC	7 cut(s)	129, 390, 429, 593, 922, 1383, 1567
MlyI	GAGTC	6 cut(s)	7, 17, 155, 257, 719, 1849
MmeI	TCCRAC	4 cut(s)	314, 1702, 1714, 1845
MroI	TCCGGA	2 cut(s)	395, 1477
MroNI	GCCGGC	1 cut(s)	685
MseI	TTAA	7 cut(s)	77, 600, 627, 1190, 1236, 1314, 1933
MslI	CAYNNNNRTG	4 cut(s)	530, 974, 1293, 1775
MspA1I	CMGCKG	1 cut(s)	1022
MspI	CCGG	6 cut(s)	396, 422, 686, 868, 1385, 1478
MspR9I	CCNGG	8 cut(s)	119, 323, 575, 868, 875, 910, 924, 1385
MunI	CAATTG	2 cut(s)	879, 1320
Mva1269I	GAATGC	1 cut(s)	1666
MvaI	CCWGG	6 cut(s)	119, 323, 575, 875, 910, 924
MvnI	CGCG	1 cut(s)	258
NaeI	GCCGGC	1 cut(s)	687
NciI	CCSGG	2 cut(s)	868, 1385
NdeII	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
NgoMIV	GCCGGC	1 cut(s)	685
NlaIV	GGNNCC	8 cut(s)	52, 278, 534, 791, 872, 1347, 1348, 1564
NmeAIII	GCCGAG	6 cut(s)	31, 148, 235, 612, 810, 865
NruI	TCGCGA	1 cut(s)	258
NspI	RCATGY	3 cut(s)	1439, 1687, 1838
OliI	CACNNNNGTG	1 cut(s)	1293
PaeI	GCATGC	1 cut(s)	1687
PaqCI	CACCTGC	1 cut(s)	328
PcsI	WCGNNNNNNNCGW	2 cut(s)	311, 1291
PctI	GAATGC	1 cut(s)	1666
PdiI	GCCGGC	1 cut(s)	687
PfeI	GAWTC	8 cut(s)	43, 286, 316, 399, 461, 479, 1417, 1592
PleI	GAGTC	6 cut(s)	7, 16, 155, 257, 718, 1849
PpsI	GAGTC	6 cut(s)	7, 16, 155, 257, 718, 1849
PpuMI	RGGWCCY	2 cut(s)	676, 1346
PshBI	ATTAAT	2 cut(s)	627, 1314
Psp124BI	GAGCTC	3 cut(s)	129, 390, 429
Psp5II	RGGWCCY	2 cut(s)	676, 1346
Psp6I	CCWGG	6 cut(s)	117, 321, 573, 873, 908, 922
PspGI	CCWGG	6 cut(s)	117, 321, 573, 873, 908, 922
PspN4I	GGNNCC	8 cut(s)	52, 278, 534, 791, 872, 1347, 1348, 1564
PspPI	GGNCC	5 cut(s)	50, 214, 276, 676, 1346
PspPPI	RGGWCCY	2 cut(s)	676, 1346
PstI	CTGCAG	2 cut(s)	1399, 1536
PstNI	CAGNNNCTG	2 cut(s)	679, 779
PsuI	RGATCY	1 cut(s)	1796
PvuII	CAGCTG	1 cut(s)	1022
RruI	TCGCGA	1 cut(s)	258
RsaI	GTAC	2 cut(s)	1474, 1527
RsaNI	GTAC	2 cut(s)	1473, 1526
RseI	CAYNNNNRTG	4 cut(s)	530, 974, 1293, 1775
SacI	GAGCTC	3 cut(s)	129, 390, 429
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	7 cut(s)	77, 600, 627, 1190, 1236, 1314, 1933
Sau3AI	GATC	6 cut(s)	154, 1282, 1351, 1796, 1813, 1817
Sau96I	GGNCC	5 cut(s)	50, 214, 276, 676, 1346
SchI	GAGTC	6 cut(s)	7, 17, 155, 257, 719, 1849
ScrFI	CCNGG	8 cut(s)	119, 323, 575, 868, 875, 910, 924, 1385
SduI	GDGCHC	7 cut(s)	129, 390, 429, 593, 922, 1383, 1567
SfaNI	GCATC	5 cut(s)	972, 1030, 1589, 1615, 1747
SfcI	CTRYAG	5 cut(s)	20, 1335, 1395, 1532, 1839
SinI	GGWCC	3 cut(s)	50, 676, 1346
SmiMI	CAYNNNNRTG	4 cut(s)	530, 974, 1293, 1775
SphI	GCATGC	1 cut(s)	1687
SspMI	CTAG	1 cut(s)	1199
SstI	GAGCTC	3 cut(s)	129, 390, 429
StyD4I	CCNGG	8 cut(s)	117, 321, 573, 866, 873, 908, 922, 1383
StyI	CCWWGG	1 cut(s)	852
TaaI	ACNGT	2 cut(s)	948, 1064
TaiI	ACGT	2 cut(s)	600, 919
TaqI	TCGA	4 cut(s)	11, 1285, 1700, 1816
TaqII	GACCGA	2 cut(s)	38, 167
TatI	WGTACW	2 cut(s)	1472, 1525
TauI	GCSGC	3 cut(s)	209, 538, 802
TfiI	GAWTC	8 cut(s)	43, 286, 316, 399, 461, 479, 1417, 1592
Tru1I	TTAA	7 cut(s)	77, 600, 627, 1190, 1236, 1314, 1933
Tru9I	TTAA	7 cut(s)	77, 600, 627, 1190, 1236, 1314, 1933
TscAI	CASTG	3 cut(s)	644, 1069, 1468
TseI	GCWGC	9 cut(s)	109, 247, 608, 1157, 1184, 1307, 1394, 1397, 1439
TspDTI	ATGAA	5 cut(s)	427, 622, 710, 940, 1584
TspRI	CASTG	3 cut(s)	644, 1069, 1468
VpaK11BI	GGWCC	3 cut(s)	50, 676, 1346
VspI	ATTAAT	2 cut(s)	627, 1314
XagI	CCTNNNNNAGG	1 cut(s)	902
XapI	RAATTY	1 cut(s)	1240
XceI	RCATGY	3 cut(s)	1439, 1687, 1838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1123
XmiI	GTMKAC	2 cut(s)	11, 1334
XspI	CTAG	1 cut(s)	1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.