Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000344

Physical Location & Seq

Genomic Coordinates Forward (+)

399724 .. 401376

Gene Structure 1653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g00490.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGGCCGAGTCGACTCAGCTACAGCAAGCTCAACTGGCGACGATTCTCGGGCCCGACCCGGCCCCTTTCCAAACCCTAATCTCCCACCTCATGTCCTCCGCCAATGAGCAGCGCTCCCAGGCCGAGCTCCTCTTCAATCTCTGCAAGCAGACCGATCCTGACTCCCTCTGCCTCAAACTCGCTCACCTCCTCCAGTTCTCTCCCGCTGCCGAGGCCCGAGCAATGTCTGCCATTCTCCTCCGCAAGCAGCTCACTCGCGACGACTCGTACCTCTGGCCCCGATTGAATCCGACAACCCAATCCTCGCTGAAAACGATTCTCCTGACCTGTATTCAGCAGGCGGACAACAAATCTATCTCCAAGAAGCTCTGCGATACAATTTCCGAGCTCGCCTCCGGAATCTTGCCCGACAACGGCTGGCCCGAGCTCTTGCCGTTCATGTTCCAATGCGTCTCGTCCGATTCGCCCAAGCTTCAGGAATCGGCGTTTTTGATATTTGCTCAGTTATCGCAGTACATCGGCGACACCATGGTGCCGCACATAAAGGAGTTGCACGCCGTGTTCTTGCATAGCCTGGGGAACTCGCCGAACCCTGACGTTAAAATCGCAGCTTTGAACGCCGTCATCAATTTCATCCAGTGTTTGACAAGCTCTGCCGAAAGGGATAGGTTTCAGGACCTGTTGCCGGCGATGATGAAGACGTTGATGGAGTCTTTGAACAACGGGAACGAGGCCACAGCACAGGACGCTCTTGAATTGTTGATTGAATTGGCAGGGACCGAGCCCAGGTTCCTCAGGCGGCAGATTGTGGAGGTTGTCGGGGCAATGTTACAGATTGCCGAGGCTGACACCTTGGAAGAAGCTACCCGGCACTTGGCAATTGAGTTCGTAATCACCCTTGCTGAGGCCAGGGAACGTGCTCCAGGGATGATGAGAAAATTACCACAGTTTATAAGCCGATTGTTTGCCATTTTGATGAGGATGCTTCTGGATATTGAGGACGAAGCCTCATGGCATACAGCCGAGAGTGAAGATGAGGATGCGGGTGAGACTGGTAATTACAGTGTTGGGCAGGAGTGTTTGGATAGGCTTGCCATATCCCTGGGTGGGAATACCATTGTTCCCGTGGCATCCGAGCAGTTGCCTGCTTATTTGGCTGCCCCTGAGTGGCAGAAGCATCATGCTGCATTGATTGCTCTCGCTCAAATTGCAGAGGGTTGTGGCAAGTGGGGTAATGACAAAAAATTTGGAGCAAGTGGTGGCAATGGTCTTGAACTCATTTCAAGATCCACATCCTCGTGTAAGGTGGGCAGCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

440

Amino Acids

48.09

Weight (kDa)

4.96

Isoelectric Point (pI)

48.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19820
fragaria_vesca	FvH4_1g21410 FvH4_1g28300 FvH4_1g28300 FvH4_2g17651 FvH4_3g45470 FvH4_3g45470
malus_domestica	MD00G1158900.v1.1 MD03G1004600.v1.1 MD03G1004700.v1.1 MD05G1225200.v1.1 MD11G1005300.v1.1 MD11G1005800.v1.1
prunus_persica	Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1
pyrus_communis	pycom03g00480 pycom03g00490 pycom03g00500 pycom11g00440 pycom11g00450
rosa_chinensis	RchiOBHm_Chr1g0324711 RchiOBHm_Chr2g0142151 RchiOBHm_Chr2g0142161 RchiOBHm_Chr3g0475691 RchiOBHm_Chr3g0496831 RchiOBHm_Chr4g0399761 RchiOBHm_Chr4g0399771 RchiOBHm_Chr4g0399781 RchiOBHm_Chr4g0419561 RchiOBHm_Chr5g0054221 RchiOBHm_Chr5g0078241 RchiOBHm_Chr5g0083261 RchiOBHm_Chr6g0253081 RchiOBHm_Chr6g0253091 RchiOBHm_Chr6g0253101
rosa_laevigata	RLG00000006894 RLG00000017613 RLG00000022498 RLG00000023521 RLG00000029311 RLG00000034357 RLG00000037024
rosa_multiflora	Rmu_co8031396.1_g000001 Rmu_co8481369.1_g000001 Rmu_sc0000455.1_g000002 Rmu_sc0000810.1_g000007 Rmu_sc0001438.1_g000001 Rmu_sc0001692.1_g000008 Rmu_sc0001692.1_g000009 Rmu_sc0002130.1_g000004 Rmu_sc0002481.1_g000043 Rmu_sc0004932.1_g000025 Rmu_sc0004967.1_g000012 Rmu_sc0006889.1_g000031 Rmu_sc0011792.1_g000006 Rmu_sc0013655.1_g000001 Rmu_sc0036178.1_g000001 Rmu_sc0040082.1_g000001 Rmu_sc0041125.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138150 Rroxscaffold_4G00314380 Rroxscaffold_5G00362400 Rroxscaffold_6G00388660 Rroxscaffold_6G00393970
rosa_rugosa	Rorug02G0091400 Rorug03G0288200 Rorug03G0288200 Rorug05G0483800
rosa_samantha	Rh1AG440500 Rh2DG505100 Rh2DG505200 Rh3AG331800 Rh3BG368400 Rh3CG343100 Rh3CG364700 Rh3DG367800 Rh4BG222300 Rh4CG233300 Rh5AG533200 Rh5BG560500 Rh5CG583200 Rh5DG381000 Rh5DG569800 Rh6AG307400 Rh6AG307500 Rh6AG307600 Rh7AG013900 Rh7AG014000 Rh7AG153300 Rh7AG154100 Rh7AG283000 Rh7AG385300 Rh7AG446100 Rh7AG487800 Rh7CG302200 Rh7DG365100 Rh7DG365200
rosa_wichuraiana	Rw1G008740 Rw2G039350 Rw3G029040 Rw4G018940 Rw4G018950 Rw5G049970 Rw6G002460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	953
AccB1I	GGYRCC	1 cut(s)	532
AccI	GTMKAC	1 cut(s)	11
AccII	CGCG	1 cut(s)	258
AccIII	TCCGGA	1 cut(s)	395
AciI	CCGC	7 cut(s)	99, 204, 241, 341, 536, 799, 1043
AclWI	GGATC	2 cut(s)	149, 1281
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	1244
AcuI	CTGAAG	1 cut(s)	458
AdeI	CACNNNGTG	1 cut(s)	559
AfaI	GTAC	2 cut(s)	269, 515
AfeI	AGCGCT	1 cut(s)	113
AfiI	CCNNNNNNNGG	7 cut(s)	413, 685, 786, 874, 904, 1107, 1167
AgsI	TTSAA	8 cut(s)	136, 286, 616, 718, 755, 767, 1274, 1284
AjnI	CCWGG	6 cut(s)	117, 573, 785, 908, 922, 1101
AleI	CACNNNNGTG	1 cut(s)	530
Alw21I	GWGCWC	4 cut(s)	129, 390, 429, 922
Alw26I	GTCTC	2 cut(s)	457, 1043
AlwI	GGATC	2 cut(s)	149, 1281
AlwNI	CAGNNNCTG	1 cut(s)	679
Ama87I	CYCGRG	3 cut(s)	47, 216, 422
Aor13HI	TCCGGA	1 cut(s)	395
Aor51HI	AGCGCT	1 cut(s)	113
AoxI	GGCC	9 cut(s)	3, 50, 60, 120, 213, 275, 419, 732, 906
ApaI	GGGCCC	1 cut(s)	54
ApeKI	GCWGC	7 cut(s)	109, 206, 247, 608, 1157, 1184, 1311
ApoI	RAATTY	1 cut(s)	1244
ArsI	GACNNNNNNTTYG	2 cut(s)	1229, 1261
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	8 cut(s)	50, 51, 61, 214, 276, 420, 676, 777
AsuC2I	CCSGG	2 cut(s)	59, 868
AsuHPI	GGTGA	3 cut(s)	176, 886, 1058
AvaI	CYCGRG	3 cut(s)	47, 216, 422
AvaII	GGWCC	2 cut(s)	676, 777
AxyI	CCTNAGG	1 cut(s)	794
BaeGI	GKGCMC	1 cut(s)	54
BanI	GGYRCC	1 cut(s)	532
BanII	GRGCYC	5 cut(s)	54, 129, 390, 429, 786
BauI	CACGAG	1 cut(s)	1297
BbsI	GAAGAC	1 cut(s)	704
Bbv12I	GWGCWC	4 cut(s)	129, 390, 429, 922
BbvCI	CCTCAGC	1 cut(s)	903
BbvI	GCAGC	6 cut(s)	121, 193, 259, 620, 1144, 1171
BccI	CCATC	1 cut(s)	700
BceAI	ACGGC	4 cut(s)	418, 430, 542, 605
BcgI	CGANNNNNNTGC	2 cut(s)	236, 270
BciT130I	CCWGG	6 cut(s)	119, 575, 787, 910, 924, 1103
BcnI	CCSGG	2 cut(s)	59, 868
BcoDI	GTCTC	2 cut(s)	457, 1043
BfmI	CTRYAG	1 cut(s)	20
BfoI	RGCGCY	1 cut(s)	115
BisI	GCNGC	9 cut(s)	110, 207, 248, 536, 609, 800, 1158, 1185, 1312
BlsI	GCNGC	9 cut(s)	111, 208, 249, 537, 610, 801, 1159, 1186, 1313
Bme1390I	CCNGG	8 cut(s)	59, 119, 575, 787, 868, 910, 924, 1103
Bme18I	GGWCC	2 cut(s)	676, 777
BmeT110I	CYCGRG	3 cut(s)	47, 216, 422
BmgT120I	GGNCC	8 cut(s)	50, 51, 61, 214, 276, 420, 676, 777
BmiI	GGNNCC	6 cut(s)	52, 63, 278, 534, 778, 791
BmrFI	CCNGG	8 cut(s)	59, 119, 575, 787, 868, 910, 924, 1103
BmsI	GCATC	4 cut(s)	972, 1030, 1139, 1186
BpiI	GAAGAC	1 cut(s)	704
BplI	GAGNNNNNCTC	4 cut(s)	98, 130, 377, 409
BpmI	CTGGAG	2 cut(s)	176, 906
Bpu10I	CCTNAGC	1 cut(s)	903
BpuMI	CCSGG	2 cut(s)	59, 868
BsaBI	GATNNNNATC	1 cut(s)	1291
BsaWI	WCCGGW	1 cut(s)	395
Bsc4I	CCNNNNNNNGG	7 cut(s)	413, 685, 786, 874, 904, 1107, 1167
Bse118I	RCCGGY	1 cut(s)	685
Bse1I	ACTGG	4 cut(s)	39, 193, 637, 1057
Bse21I	CCTNAGG	1 cut(s)	794
Bse3DI	GCAATG	3 cut(s)	228, 831, 1270
Bse8I	GATNNNNATC	1 cut(s)	1291
BseAI	TCCGGA	1 cut(s)	395
BseBI	CCWGG	6 cut(s)	119, 575, 787, 910, 924, 1103
BseGI	GGATG	6 cut(s)	633, 933, 987, 1045, 1130, 1292
BseJI	GATNNNNATC	1 cut(s)	1291
BseLI	CCNNNNNNNGG	7 cut(s)	413, 685, 786, 874, 904, 1107, 1167
BseMI	GCAATG	3 cut(s)	228, 831, 1270
BseMII	CTCAG	5 cut(s)	29, 515, 808, 894, 1155
BseNI	ACTGG	4 cut(s)	39, 193, 637, 1057
BseRI	GAGGAG	3 cut(s)	119, 179, 227
BseSI	GKGCMC	1 cut(s)	54
BseXI	GCAGC	6 cut(s)	121, 193, 259, 620, 1144, 1171
Bsh1236I	CGCG	1 cut(s)	258
BshFI	GGCC	9 cut(s)	5, 52, 62, 122, 215, 277, 421, 734, 908
BshNI	GGYRCC	1 cut(s)	532
BsiHKAI	GWGCWC	4 cut(s)	129, 390, 429, 922
BsiHKCI	CYCGRG	3 cut(s)	47, 216, 422
BsiSI	CCGG	4 cut(s)	59, 396, 686, 868
BslFI	GGGAC	1 cut(s)	790
BslI	CCNNNNNNNGG	7 cut(s)	413, 685, 786, 874, 904, 1107, 1167
BsmAI	GTCTC	2 cut(s)	457, 1043
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	1 cut(s)	790
BsnI	GGCC	9 cut(s)	5, 52, 62, 122, 215, 277, 421, 734, 908
BsoBI	CYCGRG	3 cut(s)	47, 216, 422
Bsp120I	GGGCCC	1 cut(s)	50
Bsp1286I	GDGCHC	6 cut(s)	54, 129, 390, 429, 786, 922
Bsp13I	TCCGGA	1 cut(s)	395
Bsp143I	GATC	2 cut(s)	154, 1286
Bsp19I	CCATGG	1 cut(s)	528
Bsp68I	TCGCGA	1 cut(s)	258
BspACI	CCGC	7 cut(s)	99, 204, 241, 341, 536, 799, 1043
BspANI	GGCC	9 cut(s)	5, 52, 62, 122, 215, 277, 421, 734, 908
BspCNI	CTCAG	5 cut(s)	28, 514, 807, 895, 1156
BspEI	TCCGGA	1 cut(s)	395
BspFNI	CGCG	1 cut(s)	258
BspLI	GGNNCC	6 cut(s)	52, 63, 278, 534, 778, 791
BspPI	GGATC	2 cut(s)	149, 1281
BspT107I	GGYRCC	1 cut(s)	532
BsrDI	GCAATG	3 cut(s)	228, 831, 1270
BsrFI	RCCGGY	1 cut(s)	685
BsrI	ACTGG	4 cut(s)	39, 193, 637, 1057
BssAI	RCCGGY	1 cut(s)	685
BssMI	GATC	2 cut(s)	154, 1286
BssSI	CACGAG	1 cut(s)	1297
BssT1I	CCWWGG	2 cut(s)	528, 852
Bst2BI	CACGAG	1 cut(s)	1297
Bst2UI	CCWGG	6 cut(s)	119, 575, 787, 910, 924, 1103
Bst4CI	ACNGT	2 cut(s)	948, 1064
Bst6I	CTCTTC	1 cut(s)	137
BstAPI	GCANNNNNTGC	2 cut(s)	227, 1193
BstDEI	CTNAG	5 cut(s)	15, 501, 794, 903, 1164
BstDSI	CCRYGG	2 cut(s)	528, 1125
BstENI	CCTNNNNNAGG	1 cut(s)	902
BstF5I	GGATG	6 cut(s)	633, 933, 987, 1045, 1130, 1292
BstFNI	CGCG	1 cut(s)	258
BstH2I	RGCGCY	1 cut(s)	115
BstHHI	GCGC	1 cut(s)	114
BstKTI	GATC	2 cut(s)	157, 1289
BstMAI	GTCTC	2 cut(s)	457, 1043
BstMBI	GATC	2 cut(s)	154, 1286
BstMWI	GCNNNNNNNGC	8 cut(s)	35, 212, 227, 617, 746, 1154, 1193, 1208
BstNI	CCWGG	6 cut(s)	119, 575, 787, 910, 924, 1103
BstSCI	CCNGG	8 cut(s)	57, 117, 573, 785, 866, 908, 922, 1101
BstSFI	CTRYAG	1 cut(s)	20
BstSLI	GKGCMC	1 cut(s)	54
BstUI	CGCG	1 cut(s)	258
BstV1I	GCAGC	6 cut(s)	121, 193, 259, 620, 1144, 1171
BstV2I	GAAGAC	1 cut(s)	704
BstX2I	RGATCY	1 cut(s)	1286
BstXI	CCANNNNNNTGG	1 cut(s)	1102
BstYI	RGATCY	1 cut(s)	1286
Bsu36I	CCTNAGG	1 cut(s)	794
BsuRI	GGCC	9 cut(s)	5, 52, 62, 122, 215, 277, 421, 734, 908
BtgI	CCRYGG	2 cut(s)	528, 1125
BtgZI	GCGATG	1 cut(s)	704
BtsCI	GGATG	6 cut(s)	633, 933, 987, 1045, 1130, 1292
BtsIMutI	CAGTG	2 cut(s)	644, 1069
BtuMI	TCGCGA	1 cut(s)	258
CaiI	CAGNNNCTG	1 cut(s)	679
CfoI	GCGC	1 cut(s)	114
Cfr10I	RCCGGY	1 cut(s)	685
Cfr13I	GGNCC	8 cut(s)	50, 51, 61, 214, 276, 420, 676, 777
CseI	GACGC	2 cut(s)	439, 755
Csp6I	GTAC	2 cut(s)	268, 514
CviAII	CATG	5 cut(s)	91, 439, 529, 1011, 1181
CviQI	GTAC	2 cut(s)	268, 514
DdeI	CTNAG	5 cut(s)	15, 501, 794, 903, 1164
DpnI	GATC	2 cut(s)	156, 1288
DpnII	GATC	2 cut(s)	154, 1286
DraIII	CACNNNGTG	1 cut(s)	559
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	137
EarI	CTCTTC	1 cut(s)	137
EciI	GGCGGA	2 cut(s)	88, 356
Ecl136II	GAGCTC	3 cut(s)	127, 388, 427
Eco130I	CCWWGG	2 cut(s)	528, 852
Eco24I	GRGCYC	5 cut(s)	54, 129, 390, 429, 786
Eco47I	GGWCC	2 cut(s)	676, 777
Eco47III	AGCGCT	1 cut(s)	113
Eco53kI	GAGCTC	3 cut(s)	127, 388, 427
Eco57I	CTGAAG	1 cut(s)	458
Eco81I	CCTNAGG	1 cut(s)	794
Eco88I	CYCGRG	3 cut(s)	47, 216, 422
EcoICRI	GAGCTC	3 cut(s)	127, 388, 427
EcoNI	CCTNNNNNAGG	1 cut(s)	902
EcoO109I	RGGNCCY	1 cut(s)	676
EcoRII	CCWGG	6 cut(s)	117, 573, 785, 908, 922, 1101
EcoT14I	CCWWGG	2 cut(s)	528, 852
EcoT38I	GRGCYC	5 cut(s)	54, 129, 390, 429, 786
ErhI	CCWWGG	2 cut(s)	528, 852
Esp3I	CGTCTC	1 cut(s)	457
FaeI	CATG	5 cut(s)	94, 442, 532, 1014, 1184
FaqI	GGGAC	1 cut(s)	790
FatI	CATG	5 cut(s)	90, 438, 528, 1010, 1180
FauI	CCCGC	2 cut(s)	211, 1036
FblI	GTMKAC	1 cut(s)	11
Fnu4HI	GCNGC	9 cut(s)	110, 207, 248, 536, 609, 800, 1158, 1185, 1312
FokI	GGATG	6 cut(s)	620, 940, 994, 1052, 1117, 1279
FriOI	GRGCYC	5 cut(s)	54, 129, 390, 429, 786
Fsp4HI	GCNGC	9 cut(s)	110, 207, 248, 536, 609, 800, 1158, 1185, 1312
GlaI	GCGC	1 cut(s)	113
GluI	GCNGC	9 cut(s)	110, 207, 248, 536, 609, 800, 1158, 1185, 1312
GsuI	CTGGAG	2 cut(s)	176, 906
HaeII	RGCGCY	1 cut(s)	115
HaeIII	GGCC	9 cut(s)	5, 52, 62, 122, 215, 277, 421, 734, 908
HapII	CCGG	4 cut(s)	59, 396, 686, 868
HgaI	GACGC	2 cut(s)	439, 755
HhaI	GCGC	1 cut(s)	114
Hin1II	CATG	5 cut(s)	94, 442, 532, 1014, 1184
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	1 cut(s)	470
HpaII	CCGG	4 cut(s)	59, 396, 686, 868
HphI	GGTGA	3 cut(s)	176, 886, 1058
Hpy166II	GTNNAC	1 cut(s)	12
Hpy188I	TCNGA	4 cut(s)	291, 385, 460, 1135
Hpy8I	GTNNAC	1 cut(s)	12
Hpy99I	CGWCG	2 cut(s)	43, 263
HpyCH4III	ACNGT	2 cut(s)	948, 1064
HpyCH4IV	ACGT	3 cut(s)	597, 701, 916
HpyCH4V	TGCA	5 cut(s)	144, 553, 568, 1187, 1211
HpyF10VI	GCNNNNNNNGC	8 cut(s)	35, 212, 227, 617, 746, 1154, 1193, 1208
HpyF3I	CTNAG	5 cut(s)	15, 501, 794, 903, 1164
HpySE526I	ACGT	3 cut(s)	597, 701, 916
Hsp92II	CATG	5 cut(s)	94, 442, 532, 1014, 1184
HspAI	GCGC	1 cut(s)	112
Kpn2I	TCCGGA	1 cut(s)	395
KroI	GCCGGC	1 cut(s)	685
KroNI	GCCGGC	1 cut(s)	687
Kzo9I	GATC	2 cut(s)	154, 1286
LmnI	GCTCC	4 cut(s)	119, 132, 925, 1250
Lsp1109I	GCAGC	6 cut(s)	121, 193, 259, 620, 1144, 1171
LweI	GCATC	4 cut(s)	972, 1030, 1139, 1186
MaeII	ACGT	3 cut(s)	597, 701, 916
MaeIII	GTNAC	1 cut(s)	828
MalI	GATC	2 cut(s)	156, 1288
MboI	GATC	2 cut(s)	154, 1286
MboII	GAAGA	4 cut(s)	124, 709, 869, 1043
MfeI	CAATTG	1 cut(s)	879
MflI	RGATCY	1 cut(s)	1286
MhlI	GDGCHC	6 cut(s)	54, 129, 390, 429, 786, 922
MlyI	GAGTC	5 cut(s)	7, 17, 155, 257, 719
MmeI	TCCRAC	1 cut(s)	314
MroI	TCCGGA	1 cut(s)	395
MroNI	GCCGGC	1 cut(s)	685
MseI	TTAA	2 cut(s)	600, 1318
MslI	CAYNNNNRTG	3 cut(s)	530, 974, 1297
MspA1I	CMGCKG	1 cut(s)	206
MspI	CCGG	4 cut(s)	59, 396, 686, 868
MspR9I	CCNGG	8 cut(s)	59, 119, 575, 787, 868, 910, 924, 1103
MunI	CAATTG	1 cut(s)	879
MvaI	CCWGG	6 cut(s)	119, 575, 787, 910, 924, 1103
MvnI	CGCG	1 cut(s)	258
MwoI	GCNNNNNNNGC	8 cut(s)	35, 212, 227, 617, 746, 1154, 1193, 1208
NaeI	GCCGGC	1 cut(s)	687
NciI	CCSGG	2 cut(s)	59, 868
NcoI	CCATGG	1 cut(s)	528
NdeII	GATC	2 cut(s)	154, 1286
NgoMIV	GCCGGC	1 cut(s)	685
NlaIII	CATG	5 cut(s)	94, 442, 532, 1014, 1184
NlaIV	GGNNCC	6 cut(s)	52, 63, 278, 534, 778, 791
NmeAIII	GCCGAG	5 cut(s)	31, 148, 235, 865, 1048
NruI	TCGCGA	1 cut(s)	258
OliI	CACNNNNGTG	1 cut(s)	530
PasI	CCCWGGG	1 cut(s)	1102
PcsI	WCGNNNNNNNCGW	2 cut(s)	311, 420
PdiI	GCCGGC	1 cut(s)	687
PfeI	GAWTC	6 cut(s)	43, 286, 316, 399, 461, 479
PkrI	GCNGC	9 cut(s)	111, 208, 249, 537, 610, 801, 1159, 1186, 1313
PleI	GAGTC	5 cut(s)	7, 16, 155, 257, 718
PpsI	GAGTC	5 cut(s)	7, 16, 155, 257, 718
PpuMI	RGGWCCY	1 cut(s)	676
PsiI	TTATAA	1 cut(s)	953
Psp124BI	GAGCTC	3 cut(s)	129, 390, 429
Psp5II	RGGWCCY	1 cut(s)	676
Psp6I	CCWGG	6 cut(s)	117, 573, 785, 908, 922, 1101
PspGI	CCWGG	6 cut(s)	117, 573, 785, 908, 922, 1101
PspN4I	GGNNCC	6 cut(s)	52, 63, 278, 534, 778, 791
PspOMI	GGGCCC	1 cut(s)	50
PspPI	GGNCC	8 cut(s)	50, 51, 61, 214, 276, 420, 676, 777
PspPPI	RGGWCCY	1 cut(s)	676
PstNI	CAGNNNCTG	1 cut(s)	679
PsuI	RGATCY	1 cut(s)	1286
RruI	TCGCGA	1 cut(s)	258
RsaI	GTAC	2 cut(s)	269, 515
RsaNI	GTAC	2 cut(s)	268, 514
RseI	CAYNNNNRTG	3 cut(s)	530, 974, 1297
SacI	GAGCTC	3 cut(s)	129, 390, 429
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	2 cut(s)	600, 1318
SatI	GCNGC	9 cut(s)	110, 207, 248, 536, 609, 800, 1158, 1185, 1312
Sau3AI	GATC	2 cut(s)	154, 1286
Sau96I	GGNCC	8 cut(s)	50, 51, 61, 214, 276, 420, 676, 777
SchI	GAGTC	5 cut(s)	7, 17, 155, 257, 719
ScrFI	CCNGG	8 cut(s)	59, 119, 575, 787, 868, 910, 924, 1103
SduI	GDGCHC	6 cut(s)	54, 129, 390, 429, 786, 922
SfaNI	GCATC	4 cut(s)	972, 1030, 1139, 1186
SfcI	CTRYAG	1 cut(s)	20
SinI	GGWCC	2 cut(s)	676, 777
SmiMI	CAYNNNNRTG	3 cut(s)	530, 974, 1297
SsiI	CCGC	7 cut(s)	99, 204, 241, 341, 536, 799, 1043
SstI	GAGCTC	3 cut(s)	129, 390, 429
StyD4I	CCNGG	8 cut(s)	57, 117, 573, 785, 866, 908, 922, 1101
StyI	CCWWGG	2 cut(s)	528, 852
TaaI	ACNGT	2 cut(s)	948, 1064
TaiI	ACGT	3 cut(s)	600, 704, 919
TaqI	TCGA	1 cut(s)	11
TaqII	GACCGA	2 cut(s)	167, 794
TatI	WGTACW	1 cut(s)	513
TauI	GCSGC	2 cut(s)	538, 802
TfiI	GAWTC	6 cut(s)	43, 286, 316, 399, 461, 479
Tru1I	TTAA	2 cut(s)	600, 1318
Tru9I	TTAA	2 cut(s)	600, 1318
TscAI	CASTG	2 cut(s)	644, 1069
TseI	GCWGC	7 cut(s)	109, 206, 247, 608, 1157, 1184, 1311
TspDTI	ATGAA	3 cut(s)	427, 622, 710
TspRI	CASTG	2 cut(s)	644, 1069
VpaK11BI	GGWCC	2 cut(s)	676, 777
XagI	CCTNNNNNAGG	1 cut(s)	902
XapI	RAATTY	1 cut(s)	1244
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1123
XmiI	GTMKAC	1 cut(s)	11

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.