Rh7AG283000

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
30112527 .. 30114928
2402 bp
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UTR
Exon/CDS
Intron
Rh7AG283000.1

Sequence Viewer

Length: 378 bp
ATGATATCCGAATTCTCCTTGACCTGGTTGATGAGTCAAAAGTGGTATGAACCAGAATGGTGGAAGTTTGGTGATAAAAAATCATATTTTCGCCATGCTTCAGGTGAGATGTATGTCATTTCTCAAGCTCCTATCATCATTAGTTTCATCAAGGAACAAGCACTACAAAAAAGAATTGATGTAATTGATATTTTTGCCATGCTTCATGTGAGATGTATGACATTTCTCAAGAGCACTAACTTGAATTCTGTGAGTTGTTCTGCAGAGATATTCTCCGTACCTATGCCCATGATGATGTCAGTGTTGGATCTTGGTTTATTAGGCTTGATGTTAAACATCTTAATGACGCCAAGTTTTGCTGCTTCTCTTGGACAGGAG

Protein Analysis

126

Amino Acids

14.47

Weight (kDa)

6.09

Isoelectric Point (pI)

48.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000344)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19820
fragaria_vesca FvH4_1g21410 FvH4_1g28300 FvH4_1g28300 FvH4_2g17651 FvH4_3g45470 FvH4_3g45470
malus_domestica MD00G1158900.v1.1 MD03G1004600.v1.1 MD03G1004700.v1.1 MD05G1225200.v1.1 MD11G1005300.v1.1 MD11G1005800.v1.1
prunus_persica Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1
pyrus_communis pycom03g00480 pycom03g00490 pycom03g00500 pycom11g00440 pycom11g00450
rosa_chinensis RchiOBHm_Chr1g0324711 RchiOBHm_Chr2g0142151 RchiOBHm_Chr2g0142161 RchiOBHm_Chr3g0475691 RchiOBHm_Chr3g0496831 RchiOBHm_Chr4g0399761 RchiOBHm_Chr4g0399771 RchiOBHm_Chr4g0399781 RchiOBHm_Chr4g0419561 RchiOBHm_Chr5g0054221 RchiOBHm_Chr5g0078241 RchiOBHm_Chr5g0083261 RchiOBHm_Chr6g0253081 RchiOBHm_Chr6g0253091 RchiOBHm_Chr6g0253101
rosa_laevigata RLG00000006894 RLG00000017613 RLG00000022498 RLG00000023521 RLG00000029311 RLG00000034357 RLG00000037024
rosa_multiflora Rmu_co8031396.1_g000001 Rmu_co8481369.1_g000001 Rmu_sc0000455.1_g000002 Rmu_sc0000810.1_g000007 Rmu_sc0001438.1_g000001 Rmu_sc0001692.1_g000008 Rmu_sc0001692.1_g000009 Rmu_sc0002130.1_g000004 Rmu_sc0002481.1_g000043 Rmu_sc0004932.1_g000025 Rmu_sc0004967.1_g000012 Rmu_sc0006889.1_g000031 Rmu_sc0011792.1_g000006 Rmu_sc0013655.1_g000001 Rmu_sc0036178.1_g000001 Rmu_sc0040082.1_g000001 Rmu_sc0041125.1_g000001
rosa_roxburghii Rroxscaffold_2G00138150 Rroxscaffold_4G00314380 Rroxscaffold_5G00362400 Rroxscaffold_6G00388660 Rroxscaffold_6G00393970
rosa_rugosa Rorug02G0091400 Rorug03G0288200 Rorug03G0288200 Rorug05G0483800
rosa_samantha Rh1AG440500 Rh2DG505100 Rh2DG505200 Rh3AG331800 Rh3BG368400 Rh3CG343100 Rh3CG364700 Rh3DG367800 Rh4BG222300 Rh4CG233300 Rh5AG533200 Rh5BG560500 Rh5CG583200 Rh5DG381000 Rh5DG569800 Rh6AG307400 Rh6AG307500 Rh6AG307600 Rh7AG013900 Rh7AG014000 Rh7AG153300 Rh7AG154100 Rh7AG283000 Rh7AG385300 Rh7AG446100 Rh7AG487800 Rh7CG302200 Rh7DG365100 Rh7DG365200
rosa_wichuraiana Rw1G008740 Rw2G039350 Rw3G029040 Rw4G018940 Rw4G018950 Rw5G049970 Rw6G002460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 315
AcsI RAATTY 2 cut(s) 11, 244
AcuI CTGAAG 1 cut(s) 84
AcyI GRCGYC 1 cut(s) 347
AfaI GTAC 1 cut(s) 279
AfiI CCNNNNNNNGG 1 cut(s) 24
AgsI TTSAA 1 cut(s) 244
AjnI CCWGG 1 cut(s) 23
AluBI AGCT 1 cut(s) 128
AluI AGCT 1 cut(s) 128
Alw21I GWGCWC 1 cut(s) 236
AlwI GGATC 1 cut(s) 315
ApeKI GCWGC 1 cut(s) 359
ApoI RAATTY 2 cut(s) 11, 244
AsuHPI GGTGA 2 cut(s) 83, 116
Bbv12I GWGCWC 1 cut(s) 236
BbvI GCAGC 1 cut(s) 346
BciT130I CCWGG 1 cut(s) 25
BfmI CTRYAG 1 cut(s) 261
BisI GCNGC 1 cut(s) 360
BlsI GCNGC 1 cut(s) 361
Bme1390I CCNGG 1 cut(s) 25
BmrFI CCNGG 1 cut(s) 25
BplI GAGNNNNNCTC 2 cut(s) 257, 289
BpuEI CTTGAG 2 cut(s) 108, 212
BsaHI GRCGYC 1 cut(s) 347
Bsc4I CCNNNNNNNGG 1 cut(s) 24
BseBI CCWGG 1 cut(s) 25
BseLI CCNNNNNNNGG 1 cut(s) 24
BseXI GCAGC 1 cut(s) 346
BsiHKAI GWGCWC 1 cut(s) 236
BslI CCNNNNNNNGG 1 cut(s) 24
Bsp1286I GDGCHC 1 cut(s) 236
Bsp143I GATC 1 cut(s) 307
BspMAI CTGCAG 1 cut(s) 265
BspPI GGATC 1 cut(s) 315
BssMI GATC 1 cut(s) 307
BssNI GRCGYC 1 cut(s) 347
Bst2UI CCWGG 1 cut(s) 25
BstACI GRCGYC 1 cut(s) 347
BstKTI GATC 1 cut(s) 310
BstMBI GATC 1 cut(s) 307
BstNI CCWGG 1 cut(s) 25
BstSCI CCNGG 1 cut(s) 23
BstSFI CTRYAG 1 cut(s) 261
BstV1I GCAGC 1 cut(s) 346
BstX2I RGATCY 1 cut(s) 307
BstXI CCANNNNNNTGG 1 cut(s) 60
BstYI RGATCY 1 cut(s) 307
BtsIMutI CAGTG 1 cut(s) 306
CseI GACGC 1 cut(s) 355
CsiI ACCWGGT 1 cut(s) 23
Csp6I GTAC 1 cut(s) 278
CviAII CATG 4 cut(s) 95, 199, 206, 289
CviJI RGCY 2 cut(s) 128, 324
CviKI_1 RGCY 2 cut(s) 128, 324
CviQI GTAC 1 cut(s) 278
DpnI GATC 1 cut(s) 309
DpnII GATC 1 cut(s) 307
Eco32I GATATC 1 cut(s) 6
Eco57I CTGAAG 1 cut(s) 84
EcoRI GAATTC 2 cut(s) 11, 244
EcoRII CCWGG 1 cut(s) 23
EcoRV GATATC 1 cut(s) 6
FaeI CATG 4 cut(s) 98, 202, 209, 292
FaiI YATR 9 cut(s) 48, 85, 96, 114, 200, 207, 218, 284, 290
FatI CATG 4 cut(s) 94, 198, 205, 288
Fnu4HI GCNGC 1 cut(s) 360
Fsp4HI GCNGC 1 cut(s) 360
GluI GCNGC 1 cut(s) 360
HgaI GACGC 1 cut(s) 355
Hin1I GRCGYC 1 cut(s) 347
Hin1II CATG 4 cut(s) 98, 202, 209, 292
HinfI GANTC 1 cut(s) 34
HphI GGTGA 2 cut(s) 83, 116
Hpy188I TCNGA 1 cut(s) 10
Hpy188III TCNNGA 1 cut(s) 229
HpyCH4V TGCA 1 cut(s) 263
Hsp92I GRCGYC 1 cut(s) 347
Hsp92II CATG 4 cut(s) 98, 202, 209, 292
Kzo9I GATC 1 cut(s) 307
LmnI GCTCC 1 cut(s) 133
LpnPI CCDG 5 cut(s) 10, 37, 66, 87, 359
Lsp1109I GCAGC 1 cut(s) 346
MabI ACCWGGT 1 cut(s) 23
MalI GATC 1 cut(s) 309
MboI GATC 1 cut(s) 307
MflI RGATCY 1 cut(s) 307
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 4 cut(s) 11, 174, 183, 244
MlyI GAGTC 1 cut(s) 43
MmeI TCCRAC 1 cut(s) 285
MseI TTAA 2 cut(s) 332, 341
MslI CAYNNNNRTG 2 cut(s) 293, 341
MspR9I CCNGG 1 cut(s) 25
MvaI CCWGG 1 cut(s) 25
NdeII GATC 1 cut(s) 307
NlaIII CATG 4 cut(s) 98, 202, 209, 292
PkrI GCNGC 1 cut(s) 361
PleI GAGTC 1 cut(s) 42
PpsI GAGTC 1 cut(s) 42
Psp6I CCWGG 1 cut(s) 23
PspGI CCWGG 1 cut(s) 23
PsrI GAACNNNNNNTAC 2 cut(s) 147, 179
PstI CTGCAG 1 cut(s) 265
PsuI RGATCY 1 cut(s) 307
RsaI GTAC 1 cut(s) 279
RsaNI GTAC 1 cut(s) 278
RseI CAYNNNNRTG 2 cut(s) 293, 341
SaqAI TTAA 2 cut(s) 332, 341
SatI GCNGC 1 cut(s) 360
Sau3AI GATC 1 cut(s) 307
SchI GAGTC 1 cut(s) 43
ScrFI CCNGG 1 cut(s) 25
SduI GDGCHC 1 cut(s) 236
SetI ASST 4 cut(s) 26, 106, 130, 283
SexAI ACCWGGT 1 cut(s) 23
SfcI CTRYAG 1 cut(s) 261
SmiMI CAYNNNNRTG 2 cut(s) 293, 341
SmlI CTYRAG 2 cut(s) 123, 227
SmoI CTYRAG 2 cut(s) 123, 227
Sse9I AATT 4 cut(s) 11, 174, 183, 244
StyD4I CCNGG 1 cut(s) 23
TasI AATT 4 cut(s) 11, 174, 183, 244
Tru1I TTAA 2 cut(s) 332, 341
Tru9I TTAA 2 cut(s) 332, 341
TscAI CASTG 1 cut(s) 306
TseI GCWGC 1 cut(s) 359
TspDTI ATGAA 3 cut(s) 63, 136, 194
TspGWI ACGGA 1 cut(s) 265
TspRI CASTG 1 cut(s) 306
XapI RAATTY 2 cut(s) 11, 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.