Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000344

Physical Location & Seq

Genomic Coordinates Forward (+)

37704073 .. 37711741

Gene Structure 7669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g45470.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3348 bp

ATGGCCGAGTCGACTCAGCTCCAGCAGGCGCAACTCGCGACGATTCTCGGCCCCGACCCGGCCCCTTTCGAAACCCTAATCTCCCACCTGATGGCCTCCGCCAACGAGCAGCGATCCCAGGCCGAGCTCCTCTTCAACCTCTGCAAGCAGACCGATCCTGACTCGCTCTCGCTCAAACTCGCTCACCTCCTCCAATTCTCGCCGGCGCAGGAGGCCCGCGCCATGTCCGCCATCCTCCTCCGCAAGCAGCTCACCCGCGACGACACCTATCTCTGGCCGCGGCTCTCCCCGAACACTCAGTCCACCCTCAAATCGATTCTCCTGTCGTGTATCCAACGCGAGGAGGTCAAATCCATCTCCAAGAAGCTCTGCGACACCATCTCCGAGCTCGCCTCCGGAATCCTGCCGGAGAACGGCTGGCCGGAGCTCCTCCCGTTCATGTTCCAATGCGTCTCCTCCGATTCCCCGAAGCTTCAGGAGTCGGCGTTCCTGATATTCGCGCAGCTCTCGCAGTACATCGGCGACTCGCTGGTCCCTTACATAAAGGAATTGCACACCGTGTTCCTGCAGTGCTTGAGCTCCTCCACCAACTCCGACGTCAAGATCGCCGCGTTGAACGCCGTGATTAATTTCATTCAGTGTTTGACCAGCTCCGGAGATAGGGACAGGTTCCAGGACCTGTTGCCGGCGATGATGAGGACTCTGATGGAGTCGTTGAACAACGGGAACGAGGCCACGGCGCAGGAGGCGCTTGAGTTGTTCATCGAATTGGCTGGGACTGAGCCCAGGTTCCTCAGGAGGCAGATTGTGGAGGTCGTTGGGTCTATGCTGCAGATTGCCGAAGCTGATTCCTTGGAAGAAGGGACCAGGCACTTGGCCATAGAGTTTGTAATCACTCTGGCCGAGGCCAGGGAGCGAGCCCCGGGGATGATGAGGAAGTTGCCGCAGTTTATTAGTAGGTTGTTTGCCATTTTGATGAATATGGTTTTGGATATTGAGGATGATCCGTCGTGGCATACGGCCGAGACTGAAGATGAGGATGCTGGTGAGAGTGGCAATTACAGTGTTGGTCAGGAGTGTTTGGATAGGCTTGCCATTTCCTTGGGTGGGAATACAATTGTTCCCGTCGCATCCGAGCAGTTGCCTGCCTATTTGGCTGCCCCCGAGTGGCAGAAGCACCACGCCGCATTGATTGCCCTTGCACAGATTGCTGAGGGTTGTTCTAAGGTAATGATAAAAAATTTGGAGCAAGTGGTGGCAATGGTGTTGAACTCTTTTCAAGATCCTCATCCTCGTGTAAGGTGGGCAGCTATTAATGCGATTGGGCAGTTATCTACTGATCTGGGCCCAGACCTGCAAGTTCAATATCATCAACGGGTGCTTCCAGCGTTAGCTTCCGCCATGGATGATTTTCAGAATCCTCGTGTGCAGGCACATGCTGCTTCAGCAGTGCTCAACTTCAGTGAGAACTGTACACCGGATATTTTGACACCTTATTTGGATGGCATAGTGAGCAAATTGCTTGTACTTCTGCAGAATGGGAAACAAATGGTGCAAGAGGGGGCATTAACTGCTTTGGCATCTGTTGCTGATTCATCTCAGGAGCATTTCCAAAAATACTACGATGCTGTTATGCCTTACCTGAAAGCTATCTTGGTGAATGCAACTGATAAATCTAATCGCATGCTTCGGGCTAAATCCATGGAATGTATTAGTTTGGTTGGTATGGCTGTTGGAAAGGAAAAATTCAGGGATGACGCTAAGCAGGTCATGGAGGTGCTGATGTCATTGCAAGGGTCTCAAATGGAGACAGATGACCCGACTACAAGTTACATGCTACAAGCCTGGGCTCGACTCTGCAAATGTTTAGGACAAGATTTTCTCCCATACATGAGTGTTGTAATGCCTCCTTTGCTTCAGTCTGCTCAACTTAAGCCAGATGTAACTATTACCTCCGCAGATGACAATAGTGATATTGATGACTCTGATGATGATAGTATGGAAACAATTACTCTTGGAGATAAAAGGATTGGAATCAAGACTAGTGTATTGGAGGAAAAAGCTACAGCTTGCAATATGCTGTGTTGCTATGCAGATGAATTGAAAGAAGGTTTCTTTCCTTGGATTGATCAGGTTGCCCCAACTTTAGTGCCGCTTCTTAAATTTTATTTCCATGAAGAAGTGAGGAAGGCAGCTGTTTCAGCAATGCCGGAGCTACTGCTTTCTGCAAAGTTAGCTATAGAGAAAGGGCTAGCTCAAGGTCGTAATGAAACCTATATAAAGCAATTGTCTGACTACATCGTTCCAGCTCTGGTGGAAGCATTGCATAAGGAACCTGATACAGAAATCTGTGCAAATATTTTGGATGCGATAAACGAATGCATACAGATATCTGGACCACTTTTAGATGAGAGCCAGGTCAGATCCATTGTGGAGGAGATAAAGCAGGTGATCACTGCCAGTTCAAGTAGGAAAAGAGAGAGAGCGGAACGAACTCAAGCAGAAGATTTTGATGATGAGGAAAGGGAACTGATTAAAGAGGAAAATGAACAAGAGGAAGAAGTTTTTGATCAAGTGGGAGAAATTTTGGGAACTTTGATTAAAACGTTCAAAGCCTCTTTCTTGCCTTTCTTTGATGAGCTAGCAACATATCTAACACCTATGTGGGGCAAAGATAAAACACCTGAAGAGAGAAGGATTGCAATATGCATCTTTGATGATGTTGCAGAGCAATGTCGTGAAGCTGCTCTGAAATATTATGACACATTTCTTCCCTTTCTATTGGAGGCTTGTAATGATGAGAGCCCTGATGTTCGACAGGCAGCTGTATATGGACTTGGTGTTTGTGCAGAGTTTGGTGGAACTGTAATTAAACCTCTTATAAGCGTGGCTCTTTCAAGGCTAAATGTTGTGATTCAGCATCCCAATGCCCAGCAACCTGACAACATAATGGCATATGATAATGCGGTTTCTGCTTTAGGGAAGATTTGTCAATATCACCGTGACAGTATTGATGCAGCTCAGGTTATCCCTGCGTGGCTGAACTGTTTACCGATAAAAGGTGACTTGATTGAAGCCAAAGTTGTTCATGATCAGCTTTGCTCTATGGTTGAGAGGTCTGACGGTGATATTTTGGGTCCCAACAATCAGTATCTATCCAAAATTGTTCAAGTGTTTGCAGAGGTTTTATGCGCTGGTAAGGAGTTGGCAACCGAACAAACAGCAAGCCGGATGATAAATCTATTAAAACAGCTTCAGCAGACTTTACCACCGCAAACCTTGGCCTCAACTTGGTCTTCCCTGCAACCCCAGCAACAGCTTGCACTGCAGTCTATCCTTTCCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

1116

Amino Acids

123.69

Weight (kDa)

4.66

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_IPO5	PF25780	117 - 273	6.4e-37	IPO5-like, TPR repeats
Importin_rep_4	PF18808	284 - 375	2.6e-22	Importin repeat
HEAT_2	PF13646	384 - 483	6.8e-07	HEAT repeats
HEAT_EZ	PF13513	390 - 444	3.2e-08	HEAT-like repeat
TOR1L1_N	PF24714	396 - 576	1.4e-08	TORTIFOLIA1 N-terminal
HEAT_EZ	PF13513	474 - 528	5.4e-07	HEAT-like repeat
TPR_IMB1	PF25574	484 - 646	1.4e-11	Importin subunit beta-1-like, TPR repeats
Importin_rep_6	PF18829	784 - 887	1.2e-19	Importin repeat 6
HEAT_EZ	PF13513	895 - 947	8.7e-07	HEAT-like repeat
HEAT	PF02985	923 - 951	2.1e-06	HEAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19820
fragaria_vesca	FvH4_1g21410 FvH4_1g28300 FvH4_1g28300 FvH4_2g17651 FvH4_3g45470 FvH4_3g45470
malus_domestica	MD00G1158900.v1.1 MD03G1004600.v1.1 MD03G1004700.v1.1 MD05G1225200.v1.1 MD11G1005300.v1.1 MD11G1005800.v1.1
prunus_persica	Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.6G004500_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1 Prupe.7G004800_v2.0.a1
pyrus_communis	pycom03g00480 pycom03g00490 pycom03g00500 pycom11g00440 pycom11g00450
rosa_chinensis	RchiOBHm_Chr1g0324711 RchiOBHm_Chr2g0142151 RchiOBHm_Chr2g0142161 RchiOBHm_Chr3g0475691 RchiOBHm_Chr3g0496831 RchiOBHm_Chr4g0399761 RchiOBHm_Chr4g0399771 RchiOBHm_Chr4g0399781 RchiOBHm_Chr4g0419561 RchiOBHm_Chr5g0054221 RchiOBHm_Chr5g0078241 RchiOBHm_Chr5g0083261 RchiOBHm_Chr6g0253081 RchiOBHm_Chr6g0253091 RchiOBHm_Chr6g0253101
rosa_laevigata	RLG00000006894 RLG00000017613 RLG00000022498 RLG00000023521 RLG00000029311 RLG00000034357 RLG00000037024
rosa_multiflora	Rmu_co8031396.1_g000001 Rmu_co8481369.1_g000001 Rmu_sc0000455.1_g000002 Rmu_sc0000810.1_g000007 Rmu_sc0001438.1_g000001 Rmu_sc0001692.1_g000008 Rmu_sc0001692.1_g000009 Rmu_sc0002130.1_g000004 Rmu_sc0002481.1_g000043 Rmu_sc0004932.1_g000025 Rmu_sc0004967.1_g000012 Rmu_sc0006889.1_g000031 Rmu_sc0011792.1_g000006 Rmu_sc0013655.1_g000001 Rmu_sc0036178.1_g000001 Rmu_sc0040082.1_g000001 Rmu_sc0041125.1_g000001
rosa_roxburghii	Rroxscaffold_2G00138150 Rroxscaffold_4G00314380 Rroxscaffold_5G00362400 Rroxscaffold_6G00388660 Rroxscaffold_6G00393970
rosa_rugosa	Rorug02G0091400 Rorug03G0288200 Rorug03G0288200 Rorug05G0483800
rosa_samantha	Rh1AG440500 Rh2DG505100 Rh2DG505200 Rh3AG331800 Rh3BG368400 Rh3CG343100 Rh3CG364700 Rh3DG367800 Rh4BG222300 Rh4CG233300 Rh5AG533200 Rh5BG560500 Rh5CG583200 Rh5DG381000 Rh5DG569800 Rh6AG307400 Rh6AG307500 Rh6AG307600 Rh7AG013900 Rh7AG014000 Rh7AG153300 Rh7AG154100 Rh7AG283000 Rh7AG385300 Rh7AG446100 Rh7AG487800 Rh7CG302200 Rh7DG365100 Rh7DG365200
rosa_wichuraiana	Rw1G008740 Rw2G039350 Rw3G029040 Rw4G018940 Rw4G018950 Rw5G049970 Rw6G002460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2882
AarI	CACCTGC	1 cut(s)	2437
AasI	GACNNNNNNGTC	1 cut(s)	530
AatII	GACGTC	1 cut(s)	600
Acc36I	ACCTGC	3 cut(s)	1362, 1756, 2437
AccB7I	CCANNNNNTGG	1 cut(s)	91
AccBSI	CCGCTC	1 cut(s)	2486
AccI	GTMKAC	1 cut(s)	11
AccII	CGCG	7 cut(s)	38, 219, 258, 280, 339, 500, 611
AccIII	TCCGGA	2 cut(s)	395, 653
AclI	AACGTT	1 cut(s)	2606
AclWI	GGATC	5 cut(s)	108, 149, 998, 1277, 2418
AcoI	YGGCCR	6 cut(s)	3, 275, 419, 876, 900, 1020
AcsI	RAATTY	4 cut(s)	1240, 1745, 2162, 2583
AcuI	CTGAAG	7 cut(s)	458, 1050, 1428, 1444, 1901, 2706, 3239
AcyI	GRCGYC	1 cut(s)	597
AdeI	CACNNNGTG	1 cut(s)	559
AfaI	GTAC	3 cut(s)	515, 1474, 1527
AflII	CTTAAG	1 cut(s)	1931
AhlI	ACTAGT	1 cut(s)	2042
AjnI	CCWGG	7 cut(s)	117, 672, 785, 866, 908, 1844, 2415
AjuI	GAANNNNNNNTTGG	4 cut(s)	971, 1003, 1637, 1669
AleI	CACNNNNGTG	1 cut(s)	2662
AloI	GAACNNNNNNTCC	4 cut(s)	284, 316, 470, 502
Alw21I	GWGCWC	5 cut(s)	129, 390, 429, 581, 1455
Alw26I	GTCTC	4 cut(s)	457, 1019, 1802, 1803
AlwI	GGATC	5 cut(s)	108, 149, 998, 1277, 2418
AlwNI	CAGNNNCTG	1 cut(s)	679
Ama87I	CYCGRG	2 cut(s)	922, 1163
Aor13HI	TCCGGA	2 cut(s)	395, 653
ApaI	GGGCCC	1 cut(s)	1349
ApoI	RAATTY	4 cut(s)	1240, 1745, 2162, 2583
ArsI	GACNNNNNNTTYG	6 cut(s)	284, 316, 1480, 1512, 2826, 2858
AseI	ATTAAT	2 cut(s)	627, 1314
AspLEI	GCGC	7 cut(s)	31, 208, 221, 502, 742, 751, 3194
AsuC2I	CCSGG	3 cut(s)	59, 923, 924
AsuHPI	GGTGA	8 cut(s)	176, 244, 1058, 1669, 2461, 2990, 3074, 3137
AsuII	TTCGAA	1 cut(s)	69
AsuNHI	GCTAGC	2 cut(s)	2251, 2641
AvaI	CYCGRG	2 cut(s)	922, 1163
AvaII	GGWCC	5 cut(s)	532, 676, 864, 2396, 3137
AxyI	CCTNAGG	1 cut(s)	794
BaeGI	GKGCMC	1 cut(s)	1349
BalI	TGGCCA	1 cut(s)	878
BanII	GRGCYC	9 cut(s)	129, 390, 429, 581, 786, 922, 1349, 1852, 2807
BauI	CACGAG	2 cut(s)	1293, 1422
BbsI	GAAGAC	1 cut(s)	3288
Bbv12I	GWGCWC	5 cut(s)	129, 390, 429, 581, 1455
BbvCI	CCTCAGC	1 cut(s)	1212
BccI	CCATC	6 cut(s)	85, 239, 362, 386, 700, 1496
BceAI	ACGGC	4 cut(s)	430, 605, 753, 1035
BciT130I	CCWGG	7 cut(s)	119, 674, 787, 868, 910, 1846, 2417
BciVI	GTATCC	1 cut(s)	341
BclI	TGATCA	4 cut(s)	2128, 2451, 2569, 3091
BcnI	CCSGG	3 cut(s)	59, 923, 924
BcoDI	GTCTC	4 cut(s)	457, 1019, 1802, 1803
BcuI	ACTAGT	1 cut(s)	2042
BfaI	CTAG	3 cut(s)	2043, 2252, 2642
BfmI	CTRYAG	6 cut(s)	566, 830, 1532, 2064, 2238, 3326
BfoI	RGCGCY	1 cut(s)	752
BfrI	CTTAAG	1 cut(s)	1931
BfuAI	ACCTGC	3 cut(s)	1362, 1756, 2437
BfuI	GTATCC	1 cut(s)	341
BglI	GCCNNNNNGGC	1 cut(s)	1154
BlpI	GCTNAGC	1 cut(s)	1761
Bme18I	GGWCC	5 cut(s)	532, 676, 864, 2396, 3137
BmeT110I	CYCGRG	2 cut(s)	922, 1163
BmsI	GCATC	8 cut(s)	1030, 1139, 1589, 1615, 2356, 2718, 2929, 3004
BmtI	GCTAGC	2 cut(s)	2255, 2645
BpiI	GAAGAC	1 cut(s)	3288
BplI	GAGNNNNNCTC	2 cut(s)	377, 409
BpmI	CTGGAG	1 cut(s)	5
Bpu10I	CCTNAGC	2 cut(s)	1212, 3021
Bpu1102I	GCTNAGC	1 cut(s)	1761
Bpu14I	TTCGAA	1 cut(s)	69
BpuEI	CTTGAG	4 cut(s)	595, 773, 2241, 2481
BpuMI	CCSGG	3 cut(s)	59, 923, 924
Bsa29I	ATCGAT	1 cut(s)	314
BsaBI	GATNNNNATC	2 cut(s)	1287, 2033
BsaHI	GRCGYC	1 cut(s)	597
BsaI	GGTCTC	1 cut(s)	1803
BsaWI	WCCGGW	3 cut(s)	395, 653, 1477
BsaXI	ACNNNNNCTCC	4 cut(s)	365, 395, 470, 500
Bse118I	RCCGGY	2 cut(s)	202, 685
Bse1I	ACTGG	1 cut(s)	2460
Bse21I	CCTNAGG	1 cut(s)	794
Bse3DI	GCAATG	5 cut(s)	1266, 1787, 2211, 2321, 2738
Bse8I	GATNNNNATC	2 cut(s)	1287, 2033
BseAI	TCCGGA	2 cut(s)	395, 653
BseBI	CCWGG	7 cut(s)	119, 674, 787, 868, 910, 1846, 2417
BseCI	ATCGAT	1 cut(s)	314
BseJI	GATNNNNATC	2 cut(s)	1287, 2033
BseMI	GCAATG	5 cut(s)	1266, 1787, 2211, 2321, 2738
BseMII	CTCAG	7 cut(s)	29, 311, 771, 808, 1203, 1613, 3035
BseNI	ACTGG	1 cut(s)	2460
BseRI	GAGGAG	8 cut(s)	119, 179, 227, 356, 419, 445, 571, 2450
BseSI	GKGCMC	1 cut(s)	1349
BseX3I	CGGCCG	1 cut(s)	1020
BseYI	CCCAGC	3 cut(s)	773, 2931, 3309
BsgI	GTGCAG	2 cut(s)	1448, 2868
Bsh1236I	CGCG	7 cut(s)	38, 219, 258, 280, 339, 500, 611
Bsh1285I	CGRYCG	1 cut(s)	1023
BshVI	ATCGAT	1 cut(s)	314
BsiEI	CGRYCG	1 cut(s)	1023
BsiHKAI	GWGCWC	5 cut(s)	129, 390, 429, 581, 1455
BsiHKCI	CYCGRG	2 cut(s)	922, 1163
BslFI	GGGAC	5 cut(s)	518, 677, 790, 877, 3123
BsmAI	GTCTC	4 cut(s)	457, 1019, 1802, 1803
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	5 cut(s)	518, 677, 790, 877, 3123
BsmI	GAATGC	2 cut(s)	1666, 2384
Bso31I	GGTCTC	1 cut(s)	1803
BsoBI	CYCGRG	2 cut(s)	922, 1163
Bsp119I	TTCGAA	1 cut(s)	69
Bsp120I	GGGCCC	1 cut(s)	1345
Bsp13I	TCCGGA	2 cut(s)	395, 653
Bsp1407I	TGTACA	1 cut(s)	1472
Bsp1720I	GCTNAGC	1 cut(s)	1761
Bsp19I	CCATGG	2 cut(s)	1401, 1701
Bsp68I	TCGCGA	1 cut(s)	38
BspCNI	CTCAG	7 cut(s)	28, 310, 772, 807, 1204, 1612, 3034
BspDI	ATCGAT	1 cut(s)	314
BspEI	TCCGGA	2 cut(s)	395, 653
BspFNI	CGCG	7 cut(s)	38, 219, 258, 280, 339, 500, 611
BspHI	TCATGA	1 cut(s)	3088
BspMAI	CTGCAG	4 cut(s)	570, 834, 1536, 3330
BspMI	ACCTGC	3 cut(s)	1362, 1756, 2437
BspOI	GCTAGC	2 cut(s)	2255, 2645
BspPI	GGATC	5 cut(s)	108, 149, 998, 1277, 2418
BspT104I	TTCGAA	1 cut(s)	69
BspTI	CTTAAG	1 cut(s)	1931
BspTNI	GGTCTC	1 cut(s)	1803
BsrBI	CCGCTC	1 cut(s)	2486
BsrDI	GCAATG	5 cut(s)	1266, 1787, 2211, 2321, 2738
BsrFI	RCCGGY	2 cut(s)	202, 685
BsrGI	TGTACA	1 cut(s)	1472
BsrI	ACTGG	1 cut(s)	2460
BssAI	RCCGGY	2 cut(s)	202, 685
BssNI	GRCGYC	1 cut(s)	597
BssSI	CACGAG	2 cut(s)	1293, 1422
BssT1I	CCWWGG	6 cut(s)	852, 1101, 1401, 1701, 2120, 3279
Bst2BI	CACGAG	2 cut(s)	1293, 1422
Bst2UI	CCWGG	7 cut(s)	119, 674, 787, 868, 910, 1846, 2417
Bst4CI	ACNGT	8 cut(s)	559, 1064, 1472, 2866, 3002, 3008, 3047, 3125
Bst6I	CTCTTC	2 cut(s)	137, 2682
BstACI	GRCGYC	1 cut(s)	597
BstAFI	CTTAAG	1 cut(s)	1931
BstAPI	GCANNNNNTGC	5 cut(s)	1193, 1208, 1439, 1571, 1586
BstAUI	TGTACA	1 cut(s)	1472
BstBI	TTCGAA	1 cut(s)	69
BstDEI	CTNAG	9 cut(s)	15, 297, 780, 794, 1212, 1224, 1599, 1761, 3021
BstDSI	CCRYGG	4 cut(s)	278, 735, 1401, 1701
BstFNI	CGCG	7 cut(s)	38, 219, 258, 280, 339, 500, 611
BstH2I	RGCGCY	1 cut(s)	752
BstHHI	GCGC	7 cut(s)	31, 208, 221, 502, 742, 751, 3194
BstMAI	GTCTC	4 cut(s)	457, 1019, 1802, 1803
BstMCI	CGRYCG	1 cut(s)	1023
BstNI	CCWGG	7 cut(s)	119, 674, 787, 868, 910, 1846, 2417
BstNSI	RCATGY	3 cut(s)	1439, 1687, 1837
BstSFI	CTRYAG	6 cut(s)	566, 830, 1532, 2064, 2238, 3326
BstSLI	GKGCMC	1 cut(s)	1349
BstUI	CGCG	7 cut(s)	38, 219, 258, 280, 339, 500, 611
BstV2I	GAAGAC	1 cut(s)	3288
BstX2I	RGATCY	2 cut(s)	1282, 2423
BstXI	CCANNNNNNTGG	2 cut(s)	874, 1102
BstYI	RGATCY	2 cut(s)	1282, 2423
BstZI	CGGCCG	1 cut(s)	1020
Bsu15I	ATCGAT	1 cut(s)	314
Bsu36I	CCTNAGG	1 cut(s)	794
BsuI	GTATCC	1 cut(s)	341
BsuTUI	ATCGAT	1 cut(s)	314
BtgI	CCRYGG	4 cut(s)	278, 735, 1401, 1701
BtgZI	GCGATG	1 cut(s)	704
BtsI	GCAGTG	4 cut(s)	575, 1455, 2454, 3323
BtsIMutI	CAGTG	7 cut(s)	575, 644, 1069, 1455, 1468, 2454, 3323
BtuMI	TCGCGA	1 cut(s)	38
BveI	ACCTGC	3 cut(s)	1362, 1756, 2437
CaiI	CAGNNNCTG	1 cut(s)	679
CciI	TCATGA	1 cut(s)	3088
CfoI	GCGC	7 cut(s)	31, 208, 221, 502, 742, 751, 3194
Cfr10I	RCCGGY	2 cut(s)	202, 685
Cfr42I	CCGCGG	1 cut(s)	281
Cfr9I	CCCGGG	1 cut(s)	922
ClaI	ATCGAT	1 cut(s)	314
CseI	GACGC	2 cut(s)	439, 1766
Csp6I	GTAC	3 cut(s)	514, 1473, 1526
CviQI	GTAC	3 cut(s)	514, 1473, 1526
DdeI	CTNAG	9 cut(s)	15, 297, 780, 794, 1212, 1224, 1599, 1761, 3021
DraIII	CACNNNGTG	1 cut(s)	559
DrdI	GACNNNNNNGTC	1 cut(s)	530
DseDI	GACNNNNNNGTC	1 cut(s)	530
EaeI	YGGCCR	6 cut(s)	3, 275, 419, 876, 900, 1020
EagI	CGGCCG	1 cut(s)	1020
Eam1104I	CTCTTC	2 cut(s)	137, 2682
EarI	CTCTTC	2 cut(s)	137, 2682
EciI	GGCGGA	3 cut(s)	88, 217, 1387
Ecl136II	GAGCTC	4 cut(s)	127, 388, 427, 579
EclXI	CGGCCG	1 cut(s)	1020
Eco130I	CCWWGG	6 cut(s)	852, 1101, 1401, 1701, 2120, 3279
Eco24I	GRGCYC	9 cut(s)	129, 390, 429, 581, 786, 922, 1349, 1852, 2807
Eco31I	GGTCTC	1 cut(s)	1803
Eco32I	GATATC	1 cut(s)	2391
Eco47I	GGWCC	5 cut(s)	532, 676, 864, 2396, 3137
Eco52I	CGGCCG	1 cut(s)	1020
Eco53kI	GAGCTC	4 cut(s)	127, 388, 427, 579
Eco57I	CTGAAG	7 cut(s)	458, 1050, 1428, 1444, 1901, 2706, 3239
Eco81I	CCTNAGG	1 cut(s)	794
Eco88I	CYCGRG	2 cut(s)	922, 1163
EcoICRI	GAGCTC	4 cut(s)	127, 388, 427, 579
EcoO109I	RGGNCCY	2 cut(s)	676, 3137
EcoRII	CCWGG	7 cut(s)	117, 672, 785, 866, 908, 1844, 2415
EcoRV	GATATC	1 cut(s)	2391
EcoT14I	CCWWGG	6 cut(s)	852, 1101, 1401, 1701, 2120, 3279
EcoT22I	ATGCAT	2 cut(s)	2384, 2711
EcoT38I	GRGCYC	9 cut(s)	129, 390, 429, 581, 786, 922, 1349, 1852, 2807
ErhI	CCWWGG	6 cut(s)	852, 1101, 1401, 1701, 2120, 3279
Esp3I	CGTCTC	1 cut(s)	457
FaqI	GGGAC	5 cut(s)	518, 677, 790, 877, 3123
FauI	CCCGC	2 cut(s)	224, 263
FauNDI	CATATG	1 cut(s)	2956
FbaI	TGATCA	4 cut(s)	2128, 2451, 2569, 3091
FblI	GTMKAC	1 cut(s)	11
FriOI	GRGCYC	9 cut(s)	129, 390, 429, 581, 786, 922, 1349, 1852, 2807
FspBI	CTAG	3 cut(s)	2043, 2252, 2642
GlaI	GCGC	7 cut(s)	30, 207, 220, 501, 741, 750, 3193
GsaI	CCCAGC	3 cut(s)	777, 2935, 3313
GsuI	CTGGAG	1 cut(s)	5
HaeII	RGCGCY	1 cut(s)	752
HgaI	GACGC	2 cut(s)	439, 1766
HhaI	GCGC	7 cut(s)	31, 208, 221, 502, 742, 751, 3194
Hin1I	GRCGYC	1 cut(s)	597
Hin6I	GCGC	7 cut(s)	29, 206, 219, 500, 740, 749, 3192
HinP1I	GCGC	7 cut(s)	29, 206, 219, 500, 740, 749, 3192
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	1 cut(s)	470
HphI	GGTGA	8 cut(s)	176, 244, 1058, 1669, 2461, 2990, 3074, 3137
Hpy166II	GTNNAC	4 cut(s)	12, 303, 1475, 3050
Hpy8I	GTNNAC	4 cut(s)	12, 303, 1475, 3050
Hpy99I	CGWCG	5 cut(s)	43, 263, 599, 1012, 1130
HpyAV	CCTTC	4 cut(s)	854, 2102, 2182, 2688
HpyCH4III	ACNGT	8 cut(s)	559, 1064, 1472, 2866, 3002, 3008, 3047, 3125
HpyCH4IV	ACGT	2 cut(s)	597, 2606
HpyF3I	CTNAG	9 cut(s)	15, 297, 780, 794, 1212, 1224, 1599, 1761, 3021
HpySE526I	ACGT	2 cut(s)	597, 2606
Hsp92I	GRCGYC	1 cut(s)	597
HspAI	GCGC	7 cut(s)	29, 206, 219, 500, 740, 749, 3192
KflI	GGGWCCC	1 cut(s)	3137
Kpn2I	TCCGGA	2 cut(s)	395, 653
KroI	GCCGGC	2 cut(s)	202, 685
KroNI	GCCGGC	2 cut(s)	204, 687
Ksp22I	TGATCA	4 cut(s)	2128, 2451, 2569, 3091
KspI	CCGCGG	1 cut(s)	281
LweI	GCATC	8 cut(s)	1030, 1139, 1589, 1615, 2356, 2718, 2929, 3004
MaeI	CTAG	3 cut(s)	2043, 2252, 2642
MaeII	ACGT	2 cut(s)	597, 2606
MaeIII	GTNAC	4 cut(s)	1829, 1942, 3002, 3062
MbiI	CCGCTC	1 cut(s)	2486
MfeI	CAATTG	2 cut(s)	1116, 2285
MflI	RGATCY	2 cut(s)	1282, 2423
MlsI	TGGCCA	1 cut(s)	878
MluNI	TGGCCA	1 cut(s)	878
MlyI	GAGTC	9 cut(s)	7, 17, 155, 488, 518, 694, 719, 1848, 1976
MmeI	TCCRAC	3 cut(s)	358, 618, 1714
Mox20I	TGGCCA	1 cut(s)	878
Mph1103I	ATGCAT	2 cut(s)	2384, 2711
MreI	CGCCGGCG	1 cut(s)	202
MroI	TCCGGA	2 cut(s)	395, 653
MroNI	GCCGGC	2 cut(s)	202, 685
MscI	TGGCCA	1 cut(s)	878
MseI	TTAA	9 cut(s)	627, 1314, 1568, 1932, 2160, 2535, 2601, 2871, 3245
MslI	CAYNNNNRTG	5 cut(s)	974, 1293, 1775, 2662, 2925
Msp20I	TGGCCA	1 cut(s)	878
MspA1I	CMGCKG	3 cut(s)	280, 2195, 2825
MspCI	CTTAAG	1 cut(s)	1931
MunI	CAATTG	2 cut(s)	1116, 2285
Mva1269I	GAATGC	2 cut(s)	1666, 2384
MvaI	CCWGG	7 cut(s)	119, 674, 787, 868, 910, 1846, 2417
MvnI	CGCG	7 cut(s)	38, 219, 258, 280, 339, 500, 611
NaeI	GCCGGC	2 cut(s)	204, 687
NciI	CCSGG	3 cut(s)	59, 923, 924
NcoI	CCATGG	2 cut(s)	1401, 1701
NdeI	CATATG	1 cut(s)	2956
NgoMIV	GCCGGC	2 cut(s)	202, 685
NheI	GCTAGC	2 cut(s)	2251, 2641
NmeAIII	GCCGAG	5 cut(s)	27, 31, 148, 928, 1048
NmuCI	GTSAC	2 cut(s)	3002, 3062
NruI	TCGCGA	1 cut(s)	38
NsiI	ATGCAT	2 cut(s)	2384, 2711
NspI	RCATGY	3 cut(s)	1439, 1687, 1837
NspV	TTCGAA	1 cut(s)	69
OliI	CACNNNNGTG	1 cut(s)	2662
PaeI	GCATGC	1 cut(s)	1687
PagI	TCATGA	1 cut(s)	3088
PaqCI	CACCTGC	1 cut(s)	2437
PctI	GAATGC	2 cut(s)	1666, 2384
PdiI	GCCGGC	2 cut(s)	204, 687
PfeI	GAWTC	9 cut(s)	43, 316, 399, 461, 848, 1417, 1592, 2034, 2914
PflMI	CCANNNNNTGG	1 cut(s)	91
PfoI	TCCNGGA	1 cut(s)	672
PleI	GAGTC	9 cut(s)	7, 16, 155, 487, 518, 694, 718, 1848, 1976
PpsI	GAGTC	9 cut(s)	7, 16, 155, 487, 518, 694, 718, 1848, 1976
PpuMI	RGGWCCY	2 cut(s)	676, 3137
PshBI	ATTAAT	2 cut(s)	627, 1314
PsiI	TTATAA	1 cut(s)	2882
Psp124BI	GAGCTC	4 cut(s)	129, 390, 429, 581
Psp1406I	AACGTT	1 cut(s)	2606
Psp5II	RGGWCCY	2 cut(s)	676, 3137
Psp6I	CCWGG	7 cut(s)	117, 672, 785, 866, 908, 1844, 2415
PspFI	CCCAGC	3 cut(s)	773, 2931, 3309
PspGI	CCWGG	7 cut(s)	117, 672, 785, 866, 908, 1844, 2415
PspOMI	GGGCCC	1 cut(s)	1345
PspPPI	RGGWCCY	2 cut(s)	676, 3137
PstI	CTGCAG	4 cut(s)	570, 834, 1536, 3330
PstNI	CAGNNNCTG	1 cut(s)	679
PsuI	RGATCY	2 cut(s)	1282, 2423
PvuII	CAGCTG	2 cut(s)	2195, 2825
RruI	TCGCGA	1 cut(s)	38
RsaI	GTAC	3 cut(s)	515, 1474, 1527
RsaNI	GTAC	3 cut(s)	514, 1473, 1526
RseI	CAYNNNNRTG	5 cut(s)	974, 1293, 1775, 2662, 2925
SacI	GAGCTC	4 cut(s)	129, 390, 429, 581
SacII	CCGCGG	1 cut(s)	281
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	9 cut(s)	627, 1314, 1568, 1932, 2160, 2535, 2601, 2871, 3245
SchI	GAGTC	9 cut(s)	7, 17, 155, 488, 518, 694, 719, 1848, 1976
SfaNI	GCATC	8 cut(s)	1030, 1139, 1589, 1615, 2356, 2718, 2929, 3004
SfcI	CTRYAG	6 cut(s)	566, 830, 1532, 2064, 2238, 3326
Sfr303I	CCGCGG	1 cut(s)	281
SfuI	TTCGAA	1 cut(s)	69
SgrAI	CRCCGGYG	1 cut(s)	202
SgrBI	CCGCGG	1 cut(s)	281
SinI	GGWCC	5 cut(s)	532, 676, 864, 2396, 3137
SmaI	CCCGGG	1 cut(s)	924
SmiMI	CAYNNNNRTG	5 cut(s)	974, 1293, 1775, 2662, 2925
SmlI	CTYRAG	5 cut(s)	574, 752, 1931, 2256, 2496
SmoI	CTYRAG	5 cut(s)	574, 752, 1931, 2256, 2496
SpeI	ACTAGT	1 cut(s)	2042
SphI	GCATGC	1 cut(s)	1687
SspI	AATATT	2 cut(s)	2359, 2756
SspMI	CTAG	3 cut(s)	2043, 2252, 2642
SstI	GAGCTC	4 cut(s)	129, 390, 429, 581
StyI	CCWWGG	6 cut(s)	852, 1101, 1401, 1701, 2120, 3279
TaaI	ACNGT	8 cut(s)	559, 1064, 1472, 2866, 3002, 3008, 3047, 3125
TaiI	ACGT	2 cut(s)	600, 2609
TaqI	TCGA	6 cut(s)	11, 69, 314, 765, 1852, 2815
TaqII	GACCGA	1 cut(s)	167
TatI	WGTACW	3 cut(s)	513, 1472, 1525
TauI	GCSGC	6 cut(s)	280, 283, 611, 946, 1187, 2155
TfiI	GAWTC	9 cut(s)	43, 316, 399, 461, 848, 1417, 1592, 2034, 2914
Tru1I	TTAA	9 cut(s)	627, 1314, 1568, 1932, 2160, 2535, 2601, 2871, 3245
Tru9I	TTAA	9 cut(s)	627, 1314, 1568, 1932, 2160, 2535, 2601, 2871, 3245
TscAI	CASTG	7 cut(s)	575, 644, 1069, 1455, 1468, 2461, 3330
TseFI	GTSAC	2 cut(s)	3002, 3062
Tsp45I	GTSAC	2 cut(s)	3002, 3062
TspGWI	ACGGA	1 cut(s)	996
TspMI	CCCGGG	1 cut(s)	922
TspRI	CASTG	7 cut(s)	575, 644, 1069, 1455, 1468, 2461, 3330
Van91I	CCANNNNNTGG	1 cut(s)	91
Vha464I	CTTAAG	1 cut(s)	1931
VpaK11BI	GGWCC	5 cut(s)	532, 676, 864, 2396, 3137
VspI	ATTAAT	2 cut(s)	627, 1314
XapI	RAATTY	4 cut(s)	1240, 1745, 2162, 2583
XceI	RCATGY	3 cut(s)	1439, 1687, 1837
XmaI	CCCGGG	1 cut(s)	922
XmiI	GTMKAC	1 cut(s)	11
XspI	CTAG	3 cut(s)	2043, 2252, 2642
ZraI	GACGTC	1 cut(s)	598
Zsp2I	ATGCAT	2 cut(s)	2384, 2711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.