IQ-domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 488 |
| AccII | CGCG | 1 cut(s) | 156 |
| AciI | CCGC | 1 cut(s) | 132 |
| AcsI | RAATTY | 2 cut(s) | 140, 849 |
| AcuI | CTGAAG | 2 cut(s) | 22, 1187 |
| AfaI | GTAC | 3 cut(s) | 748, 942, 1024 |
| AgsI | TTSAA | 4 cut(s) | 398, 782, 962, 1076 |
| AjnI | CCWGG | 1 cut(s) | 519 |
| Alw21I | GWGCWC | 4 cut(s) | 61, 113, 320, 820 |
| Alw26I | GTCTC | 4 cut(s) | 213, 274, 416, 1082 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 217, 275 |
| AoxI | GGCC | 2 cut(s) | 1206, 1251 |
| ApeKI | GCWGC | 5 cut(s) | 485, 756, 841, 1272, 1320 |
| ApoI | RAATTY | 2 cut(s) | 140, 849 |
| AspLEI | GCGC | 1 cut(s) | 158 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 924, 957 |
| BanII | GRGCYC | 3 cut(s) | 61, 113, 320 |
| BbsI | GAAGAC | 2 cut(s) | 486, 738 |
| Bbv12I | GWGCWC | 4 cut(s) | 61, 113, 320, 820 |
| BbvI | GCAGC | 4 cut(s) | 472, 768, 853, 1259 |
| BccI | CCATC | 2 cut(s) | 99, 922 |
| BciT130I | CCWGG | 1 cut(s) | 521 |
| BcoDI | GTCTC | 4 cut(s) | 213, 274, 416, 1082 |
| BfaI | CTAG | 2 cut(s) | 89, 620 |
| BfmI | CTRYAG | 3 cut(s) | 486, 695, 1107 |
| BisI | GCNGC | 5 cut(s) | 486, 757, 842, 1273, 1321 |
| BlsI | GCNGC | 5 cut(s) | 487, 758, 843, 1274, 1322 |
| Bme1390I | CCNGG | 1 cut(s) | 521 |
| BmiI | GGNNCC | 1 cut(s) | 307 |
| BmrFI | CCNGG | 1 cut(s) | 521 |
| BmrI | ACTGGG | 1 cut(s) | 745 |
| BmsI | GCATC | 4 cut(s) | 451, 611, 1090, 1201 |
| BmuI | ACTGGG | 1 cut(s) | 745 |
| BpiI | GAAGAC | 2 cut(s) | 486, 738 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 560, 592 |
| BpmI | CTGGAG | 1 cut(s) | 368 |
| Bpu10I | CCTNAGC | 1 cut(s) | 561 |
| BpuEI | CTTGAG | 2 cut(s) | 576, 696 |
| Bsa29I | ATCGAT | 1 cut(s) | 176 |
| BsaBI | GATNNNNATC | 1 cut(s) | 375 |
| BsaJI | CCNNGG | 1 cut(s) | 606 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 6, 36 |
| Bse1I | ACTGG | 3 cut(s) | 351, 372, 740 |
| Bse3DI | GCAATG | 1 cut(s) | 804 |
| Bse8I | GATNNNNATC | 1 cut(s) | 375 |
| BseBI | CCWGG | 1 cut(s) | 521 |
| BseCI | ATCGAT | 1 cut(s) | 176 |
| BseDI | CCNNGG | 1 cut(s) | 606 |
| BseGI | GGATG | 4 cut(s) | 298, 602, 745, 933 |
| BseJI | GATNNNNATC | 1 cut(s) | 375 |
| BseMI | GCAATG | 1 cut(s) | 804 |
| BseMII | CTCAG | 7 cut(s) | 180, 209, 224, 312, 591, 641, 710 |
| BseNI | ACTGG | 3 cut(s) | 351, 372, 740 |
| BseRI | GAGGAG | 2 cut(s) | 365, 581 |
| BseXI | GCAGC | 4 cut(s) | 472, 768, 853, 1259 |
| Bsh1236I | CGCG | 1 cut(s) | 156 |
| BshFI | GGCC | 2 cut(s) | 1208, 1253 |
| BshVI | ATCGAT | 1 cut(s) | 176 |
| BsiHKAI | GWGCWC | 4 cut(s) | 61, 113, 320, 820 |
| BsiSI | CCGG | 1 cut(s) | 532 |
| BslFI | GGGAC | 1 cut(s) | 625 |
| BsmAI | GTCTC | 4 cut(s) | 213, 274, 416, 1082 |
| BsmFI | GGGAC | 1 cut(s) | 625 |
| BsmI | GAATGC | 3 cut(s) | 506, 951, 1295 |
| BsnI | GGCC | 2 cut(s) | 1208, 1253 |
| Bsp1286I | GDGCHC | 4 cut(s) | 61, 113, 320, 820 |
| Bsp143I | GATC | 3 cut(s) | 119, 874, 1219 |
| Bsp19I | CCATGG | 1 cut(s) | 606 |
| BspACI | CCGC | 1 cut(s) | 132 |
| BspANI | GGCC | 2 cut(s) | 1208, 1253 |
| BspCNI | CTCAG | 7 cut(s) | 181, 210, 223, 313, 590, 640, 711 |
| BspDI | ATCGAT | 1 cut(s) | 176 |
| BspFNI | CGCG | 1 cut(s) | 156 |
| BspHI | TCATGA | 1 cut(s) | 61 |
| BspLI | GGNNCC | 1 cut(s) | 307 |
| BspMAI | CTGCAG | 1 cut(s) | 490 |
| BspQI | GCTCTTC | 1 cut(s) | 201 |
| BsrDI | GCAATG | 1 cut(s) | 804 |
| BsrI | ACTGG | 3 cut(s) | 351, 372, 740 |
| BssECI | CCNNGG | 1 cut(s) | 606 |
| BssMI | GATC | 3 cut(s) | 119, 874, 1219 |
| BssT1I | CCWWGG | 1 cut(s) | 606 |
| Bst2UI | CCWGG | 1 cut(s) | 521 |
| Bst4CI | ACNGT | 3 cut(s) | 331, 751, 1111 |
| Bst6I | CTCTTC | 3 cut(s) | 73, 201, 540 |
| BstC8I | GCNNGC | 1 cut(s) | 1030 |
| BstDSI | CCRYGG | 1 cut(s) | 606 |
| BstF5I | GGATG | 4 cut(s) | 298, 602, 745, 933 |
| BstFNI | CGCG | 1 cut(s) | 156 |
| BstHHI | GCGC | 1 cut(s) | 158 |
| BstKTI | GATC | 3 cut(s) | 122, 877, 1222 |
| BstMAI | GTCTC | 4 cut(s) | 213, 274, 416, 1082 |
| BstMBI | GATC | 3 cut(s) | 119, 874, 1219 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1179, 1198, 1250 |
| BstNI | CCWGG | 1 cut(s) | 521 |
| BstSCI | CCNGG | 1 cut(s) | 519 |
| BstSFI | CTRYAG | 3 cut(s) | 486, 695, 1107 |
| BstUI | CGCG | 1 cut(s) | 156 |
| BstV1I | GCAGC | 4 cut(s) | 472, 768, 853, 1259 |
| BstV2I | GAAGAC | 2 cut(s) | 486, 738 |
| Bsu15I | ATCGAT | 1 cut(s) | 176 |
| BsuRI | GGCC | 2 cut(s) | 1208, 1253 |
| BsuTUI | ATCGAT | 1 cut(s) | 176 |
| BtgI | CCRYGG | 1 cut(s) | 606 |
| BtsCI | GGATG | 4 cut(s) | 298, 602, 745, 933 |
| BtsI | GCAGTG | 1 cut(s) | 889 |
| BtsIMutI | CAGTG | 3 cut(s) | 336, 756, 889 |
| Cac8I | GCNNGC | 1 cut(s) | 1030 |
| CaiI | CAGNNNCTG | 2 cut(s) | 217, 275 |
| CciI | TCATGA | 1 cut(s) | 61 |
| CfoI | GCGC | 1 cut(s) | 158 |
| ClaI | ATCGAT | 1 cut(s) | 176 |
| CseI | GACGC | 1 cut(s) | 491 |
| Csp6I | GTAC | 3 cut(s) | 747, 941, 1023 |
| CviAII | CATG | 2 cut(s) | 62, 607 |
| CviQI | GTAC | 3 cut(s) | 747, 941, 1023 |
| DpnI | GATC | 3 cut(s) | 121, 876, 1221 |
| DpnII | GATC | 3 cut(s) | 119, 874, 1219 |
| DraI | TTTAAA | 1 cut(s) | 1138 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 488 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 488 |
| Eam1104I | CTCTTC | 3 cut(s) | 73, 201, 540 |
| EarI | CTCTTC | 3 cut(s) | 73, 201, 540 |
| Ecl136II | GAGCTC | 3 cut(s) | 59, 111, 318 |
| Eco130I | CCWWGG | 1 cut(s) | 606 |
| Eco24I | GRGCYC | 3 cut(s) | 61, 113, 320 |
| Eco53kI | GAGCTC | 3 cut(s) | 59, 111, 318 |
| Eco57I | CTGAAG | 2 cut(s) | 22, 1187 |
| EcoICRI | GAGCTC | 3 cut(s) | 59, 111, 318 |
| EcoRII | CCWGG | 1 cut(s) | 519 |
| EcoT14I | CCWWGG | 1 cut(s) | 606 |
| EcoT22I | ATGCAT | 2 cut(s) | 604, 832 |
| EcoT38I | GRGCYC | 3 cut(s) | 61, 113, 320 |
| ErhI | CCWWGG | 1 cut(s) | 606 |
| FaeI | CATG | 2 cut(s) | 65, 610 |
| FaqI | GGGAC | 1 cut(s) | 625 |
| FatI | CATG | 2 cut(s) | 61, 606 |
| Fnu4HI | GCNGC | 5 cut(s) | 486, 757, 842, 1273, 1321 |
| FokI | GGATG | 4 cut(s) | 305, 589, 752, 940 |
| FriOI | GRGCYC | 3 cut(s) | 61, 113, 320 |
| Fsp4HI | GCNGC | 5 cut(s) | 486, 757, 842, 1273, 1321 |
| FspBI | CTAG | 2 cut(s) | 89, 620 |
| GlaI | GCGC | 1 cut(s) | 157 |
| GluI | GCNGC | 5 cut(s) | 486, 757, 842, 1273, 1321 |
| GsuI | CTGGAG | 1 cut(s) | 368 |
| HaeIII | GGCC | 2 cut(s) | 1208, 1253 |
| HapII | CCGG | 1 cut(s) | 532 |
| HgaI | GACGC | 1 cut(s) | 491 |
| HhaI | GCGC | 1 cut(s) | 158 |
| Hin1II | CATG | 2 cut(s) | 65, 610 |
| Hin6I | GCGC | 1 cut(s) | 156 |
| HinP1I | GCGC | 1 cut(s) | 156 |
| HindIII | AAGCTT | 2 cut(s) | 994, 1199 |
| HpaII | CCGG | 1 cut(s) | 532 |
| Hpy166II | GTNNAC | 1 cut(s) | 941 |
| Hpy188I | TCNGA | 9 cut(s) | 26, 172, 190, 226, 322, 447, 630, 720, 1087 |
| Hpy188III | TCNNGA | 6 cut(s) | 40, 62, 511, 579, 593, 661 |
| Hpy8I | GTNNAC | 1 cut(s) | 941 |
| HpyAV | CCTTC | 1 cut(s) | 1243 |
| HpyCH4III | ACNGT | 3 cut(s) | 331, 751, 1111 |
| HpyCH4V | TGCA | 8 cut(s) | 488, 602, 830, 980, 1103, 1117, 1225, 1275 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1179, 1198, 1250 |
| Hsp92II | CATG | 2 cut(s) | 65, 610 |
| HspAI | GCGC | 1 cut(s) | 156 |
| Kzo9I | GATC | 3 cut(s) | 119, 874, 1219 |
| LguI | GCTCTTC | 1 cut(s) | 201 |
| LmnI | GCTCC | 3 cut(s) | 56, 108, 534 |
| Lsp1109I | GCAGC | 4 cut(s) | 472, 768, 853, 1259 |
| LweI | GCATC | 4 cut(s) | 451, 611, 1090, 1201 |
| MaeI | CTAG | 2 cut(s) | 89, 620 |
| MaeIII | GTNAC | 3 cut(s) | 7, 331, 515 |
| MalI | GATC | 3 cut(s) | 121, 876, 1221 |
| MboI | GATC | 3 cut(s) | 119, 874, 1219 |
| MfeI | CAATTG | 1 cut(s) | 957 |
| MhlI | GDGCHC | 4 cut(s) | 61, 113, 320, 820 |
| MluCI | AATT | 5 cut(s) | 140, 495, 637, 849, 957 |
| MlyI | GAGTC | 3 cut(s) | 293, 328, 798 |
| MmeI | TCCRAC | 3 cut(s) | 887, 1017, 1077 |
| Mph1103I | ATGCAT | 2 cut(s) | 604, 832 |
| MseI | TTAA | 3 cut(s) | 144, 312, 1137 |
| MspA1I | CMGCKG | 1 cut(s) | 1028 |
| MspI | CCGG | 1 cut(s) | 532 |
| MspR9I | CCNGG | 1 cut(s) | 521 |
| MunI | CAATTG | 1 cut(s) | 957 |
| Mva1269I | GAATGC | 3 cut(s) | 506, 951, 1295 |
| MvaI | CCWGG | 1 cut(s) | 521 |
| MvnI | CGCG | 1 cut(s) | 156 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1179, 1198, 1250 |
| NcoI | CCATGG | 1 cut(s) | 606 |
| NdeII | GATC | 3 cut(s) | 119, 874, 1219 |
| NlaIII | CATG | 2 cut(s) | 65, 610 |
| NlaIV | GGNNCC | 1 cut(s) | 307 |
| NmuCI | GTSAC | 1 cut(s) | 331 |
| NsiI | ATGCAT | 2 cut(s) | 604, 832 |
| PagI | TCATGA | 1 cut(s) | 61 |
| PciSI | GCTCTTC | 1 cut(s) | 201 |
| PctI | GAATGC | 3 cut(s) | 506, 951, 1295 |
| PfeI | GAWTC | 8 cut(s) | 167, 173, 185, 266, 587, 682, 778, 893 |
| PkrI | GCNGC | 5 cut(s) | 487, 758, 843, 1274, 1322 |
| PleI | GAGTC | 3 cut(s) | 293, 328, 797 |
| PpsI | GAGTC | 3 cut(s) | 293, 328, 797 |
| Psp124BI | GAGCTC | 3 cut(s) | 61, 113, 320 |
| Psp6I | CCWGG | 1 cut(s) | 519 |
| PspGI | CCWGG | 1 cut(s) | 519 |
| PspN4I | GGNNCC | 1 cut(s) | 307 |
| PstI | CTGCAG | 1 cut(s) | 490 |
| PstNI | CAGNNNCTG | 2 cut(s) | 217, 275 |
| PvuII | CAGCTG | 1 cut(s) | 1028 |
| RsaI | GTAC | 3 cut(s) | 748, 942, 1024 |
| RsaNI | GTAC | 3 cut(s) | 747, 941, 1023 |
| SacI | GAGCTC | 3 cut(s) | 61, 113, 320 |
| SapI | GCTCTTC | 1 cut(s) | 201 |
| SaqAI | TTAA | 3 cut(s) | 144, 312, 1137 |
| SatI | GCNGC | 5 cut(s) | 486, 757, 842, 1273, 1321 |
| Sau3AI | GATC | 3 cut(s) | 119, 874, 1219 |
| SchI | GAGTC | 3 cut(s) | 293, 328, 798 |
| ScrFI | CCNGG | 1 cut(s) | 521 |
| SduI | GDGCHC | 4 cut(s) | 61, 113, 320, 820 |
| SfaNI | GCATC | 4 cut(s) | 451, 611, 1090, 1201 |
| SfcI | CTRYAG | 3 cut(s) | 486, 695, 1107 |
| SmlI | CTYRAG | 2 cut(s) | 591, 711 |
| SmoI | CTYRAG | 2 cut(s) | 591, 711 |
| Sse9I | AATT | 5 cut(s) | 140, 495, 637, 849, 957 |
| SsiI | CCGC | 1 cut(s) | 132 |
| SspMI | CTAG | 2 cut(s) | 89, 620 |
| SstI | GAGCTC | 3 cut(s) | 61, 113, 320 |
| StyD4I | CCNGG | 1 cut(s) | 519 |
| StyI | CCWWGG | 1 cut(s) | 606 |
| TaaI | ACNGT | 3 cut(s) | 331, 751, 1111 |
| TaqI | TCGA | 6 cut(s) | 176, 261, 359, 474, 685, 792 |
| TaqII | GACCGA | 1 cut(s) | 1136 |
| TasI | AATT | 5 cut(s) | 140, 495, 637, 849, 957 |
| TatI | WGTACW | 1 cut(s) | 746 |
| TfiI | GAWTC | 8 cut(s) | 167, 173, 185, 266, 587, 682, 778, 893 |
| Tru1I | TTAA | 3 cut(s) | 144, 312, 1137 |
| Tru9I | TTAA | 3 cut(s) | 144, 312, 1137 |
| TscAI | CASTG | 3 cut(s) | 336, 756, 889 |
| TseFI | GTSAC | 1 cut(s) | 331 |
| TseI | GCWGC | 5 cut(s) | 485, 756, 841, 1272, 1320 |
| Tsp45I | GTSAC | 1 cut(s) | 331 |
| TspDTI | ATGAA | 1 cut(s) | 153 |
| TspGWI | ACGGA | 2 cut(s) | 298, 631 |
| TspRI | CASTG | 3 cut(s) | 336, 756, 889 |
| XapI | RAATTY | 2 cut(s) | 140, 849 |
| XspI | CTAG | 2 cut(s) | 89, 620 |
| Zsp2I | ATGCAT | 2 cut(s) | 604, 832 |