Prupe.3G206100_v2.0.a1

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000358
Physical Location & Seq
Forward (+)
21337762 .. 21340722
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G206100.1

Sequence Viewer

Length: 1215 bp
ATGGGTATCAATGGAGGTTTGGTCAGGAGTGTCTTTTCAAGAAATAGGTCTTTGGGAACTCATGAGAGCAATGTAAGGAGCAATATGACAGAAAGGAGAAGATGGAGCTCTGTTAGATCATACTTATGTGGGGATGAATATAATTCAGTCCTTGCAGAAAATGATTCATCTTCAGTTAAGAGCTCTGTGGTTACTCCCACACAGCTCAATTCAGTCCTTGTAGAGGACGATTCTTCTTCGGTTAAGAGCTCTGAGGCTACTGTTACACAACCGATGCCAGAAGACTTACCAGACAAGGATGGCATCAAAAGAGAAGTAACTAAGGAAGATATGGAAATGGCAAAGAAGGAATTTTCGGTCTCAAAAACTATGTCTGAAGAGCAAGCAGCAACCATCATCCAGTTAGCATTTAGAGGCTTTCTGACTAGGTGTCAAAATGAAGGAATTAAATCGAAGTATGGTAAGCAGGAGCTTATTGTAGGACCAGAAAGTCTAAGTATGGAGTCTCTGGGCACATCAGTTGAAGTTCAAACGGGAAATTCTGTGGATGTCTACTCAATTCAAGAAGAAAATGTGGCTGCTCACCGCCGGATGCAACAGAAAGCTAGAACTCAGGAACTAAAGCTGAAGGAAGAATGGGATGATAGCACGGTGAGTAGCAACATATCAAAAATGAGGATTCAGAACAGACTGGAAGCAACGACCAGGCGTGAGAGAGCACTGGCTTATGCCTTTTCACAACAGCTAAGGATCTGTTCAAAGAAAAGACACACCACATCTGATGGCACAGAACAGAACATGGGATGGAGCTGGCTGGAACGGTGGATGGCAACCCGCCCTCCTGAAATCTCCTCAGTCGAAAGTCATATGAGCAATCATGTTGAGCCAATTAACAGCAACCAAAGATTTATTATCGGAAAGAAATTGTTCGACGGGGCAGGTGAAGAAAAAGAGAGCTGCGGATCTAATGAAGTGAATATCCTATTTGATAGCTTCCCAGTAACAACAGCAGAAGAGAAAGATGGCTATAGTCCAACTCAAAACAGGTTTAAGGCTACAAGAAGTGCATCAAGGAGAAAAACTGCGCCAAGCTATGAGTGTGGGAAAGAGTATCCCAAGGTAAGCAAGAAGGATTGTTCGAGGGAGGCTGAAAAAGATAAAGAGCACAACCCGAAGAACACAGGAAGAATCAAGTACAAAAATGCTTCGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ

Protein Analysis

405

Amino Acids

45.63

Weight (kDa)

8.56

Isoelectric Point (pI)

58.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000358)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G35670
fragaria_vesca FvH4_1g05120 FvH4_1g05120 FvH4_2g32511 FvH4_2g32520 FvH4_2g32530 FvH4_2g32540 FvH4_2g32590 FvH4_2g32600 FvH4_2g32610 FvH4_2g32630 FvH4_2g34980 FvH4_2g34990 FvH4_2g35000 FvH4_2g35530 FvH4_3g30491 FvH4_5g19260 FvH4_5g19260 FvH4_5g33281 FvH4_6g06400 FvH4_6g07350 FvH4_6g07350 FvH4_6g07350 FvH4_6g10172 FvH4_6g10180 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g15310 FvH4_6g41671 FvH4_6g41680 FvH4_6g41680
malus_domestica MD09G1117800.v1.1 MD15G1093400.v1.1 MD17G1109100.v1.1
prunus_persica Prupe.1G448200_v2.0.a1 Prupe.3G206100_v2.0.a1 Prupe.3G206100_v2.0.a1
pyrus_communis pycom09g04310 pycom17g10160
rosa_chinensis RchiOBHm_Chr2g0157391 RchiOBHm_Chr2g0157401 RchiOBHm_Chr3g0468781 RchiOBHm_Chr6g0306251 RchiOBHm_Chr6g0307021 RchiOBHm_Chr6g0307031
rosa_laevigata RLG00000010745 RLG00000010746 RLG00000010811 RLG00000012028 RLG00000020986 RLG00000024410
rosa_multiflora Rmu_co8477457.1_g000001 Rmu_sc0000126.1_g000004 Rmu_sc0000195.1_g000016 Rmu_sc0001639.1_g000026 Rmu_sc0001639.1_g000027 Rmu_sc0001639.1_g000028 Rmu_sc0005634.1_g000011 Rmu_sc0005634.1_g000012 Rmu_sc0017002.1_g000001 Rmu_sc0022075.1_g000001
rosa_roxburghii Rroxscaffold_2G00092220 Rroxscaffold_2G00092230 Rroxscaffold_6G00412570 Rroxscaffold_6G00412580 Rroxscaffold_7G00161250 Rroxscaffold_7G00161270
rosa_rugosa Rorug02G0460900 Rorug02G0461000 Rorug03G0096400 Rorug03G0096400 Rorug06G0348200 Rorug06G0348400 Rorug06G0355000 Rorug06G0355100
rosa_samantha Rh2AG525300 Rh2AG525400 Rh2BG539400 Rh2CG510000 Rh2DG548500 Rh3AG145800 Rh3DG167000 Rh6BG433900 Rh6BG434000 Rh6BG440200 Rh6BG440600 Rh6CG353800 Rh6CG474800 Rh6CG475100 Rh6CG482000 Rh6CG482100 Rh6DG461100 Rh6DG461300 Rh6DG461400 Rh6DG468300 Rh6DG468400
rosa_wichuraiana Rw2G043480 Rw2G043490 Rw3G013740 Rw6G040150 Rw6G040670 Rw6G040680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 929
AasI GACNNNNNNGTC 1 cut(s) 489
Acc36I ACCTGC 1 cut(s) 929
AccI GTMKAC 1 cut(s) 552
AciI CCGC 3 cut(s) 586, 835, 960
AclWI GGATC 2 cut(s) 758, 970
AcsI RAATTY 2 cut(s) 350, 538
AcuI CTGAAG 3 cut(s) 156, 396, 647
AfaI GTAC 1 cut(s) 1196
AfiI CCNNNNNNNGG 1 cut(s) 223
AgsI TTSAA 5 cut(s) 39, 524, 530, 563, 759
AhdI GACNNNNNGTC 1 cut(s) 429
AjnI CCWGG 1 cut(s) 704
Alw21I GWGCWC 5 cut(s) 110, 185, 251, 721, 1167
Alw26I GTCTC 2 cut(s) 364, 510
AlwI GGATC 2 cut(s) 758, 970
ApeKI GCWGC 3 cut(s) 386, 578, 957
ApoI RAATTY 2 cut(s) 350, 538
ArsI GACNNNNNNTTYG 2 cut(s) 356, 388
Asp700I GAANNNNTTC 1 cut(s) 926
AspLEI GCGC 1 cut(s) 1087
AspS9I GGNCC 1 cut(s) 482
AsuHPI GGTGA 3 cut(s) 575, 664, 953
AvaII GGWCC 1 cut(s) 482
BaeGI GKGCMC 1 cut(s) 515
BanII GRGCYC 3 cut(s) 110, 185, 251
BbsI GAAGAC 1 cut(s) 288
Bbv12I GWGCWC 5 cut(s) 110, 185, 251, 721, 1167
BbvI GCAGC 3 cut(s) 398, 565, 944
BccI CCATC 7 cut(s) 96, 293, 401, 776, 798, 820, 1016
BciT130I CCWGG 1 cut(s) 706
BciVI GTATCC 1 cut(s) 1122
BcoDI GTCTC 2 cut(s) 364, 510
BfaI CTAG 2 cut(s) 426, 606
BfmI CTRYAG 1 cut(s) 1027
BfuAI ACCTGC 1 cut(s) 929
BfuI GTATCC 1 cut(s) 1122
BisI GCNGC 3 cut(s) 387, 579, 958
BlsI GCNGC 3 cut(s) 388, 580, 959
Bme1390I CCNGG 1 cut(s) 706
Bme18I GGWCC 1 cut(s) 482
BmeRI GACNNNNNGTC 1 cut(s) 429
BmgT120I GGNCC 1 cut(s) 482
BmrFI CCNGG 1 cut(s) 706
BmrI ACTGGG 1 cut(s) 992
BmsI GCATC 4 cut(s) 264, 312, 582, 1076
BmuI ACTGGG 1 cut(s) 992
BpiI GAAGAC 1 cut(s) 288
Bpu10I CCTNAGC 1 cut(s) 746
BsaI GGTCTC 1 cut(s) 364
BsaJI CCNNGG 1 cut(s) 1116
BsaXI ACNNNNNCTCC 4 cut(s) 6, 36, 823, 853
Bsc4I CCNNNNNNNGG 1 cut(s) 223
Bse1I ACTGG 4 cut(s) 400, 696, 726, 998
Bse3DI GCAATG 1 cut(s) 76
BseBI CCWGG 1 cut(s) 706
BseDI CCNNGG 1 cut(s) 1116
BseGI GGATG 8 cut(s) 139, 304, 396, 553, 597, 646, 809, 831
BseLI CCNNNNNNNGG 1 cut(s) 223
BseMI GCAATG 1 cut(s) 76
BseMII CTCAG 3 cut(s) 243, 626, 867
BseNI ACTGG 4 cut(s) 400, 696, 726, 998
BseRI GAGGAG 1 cut(s) 841
BseSI GKGCMC 1 cut(s) 515
BseXI GCAGC 3 cut(s) 398, 565, 944
BsiHKAI GWGCWC 5 cut(s) 110, 185, 251, 721, 1167
BsiSI CCGG 1 cut(s) 589
BslI CCNNNNNNNGG 1 cut(s) 223
BsmAI GTCTC 2 cut(s) 364, 510
Bso31I GGTCTC 1 cut(s) 364
Bsp1286I GDGCHC 6 cut(s) 110, 185, 251, 515, 721, 1167
Bsp143I GATC 3 cut(s) 116, 750, 962
BspACI CCGC 3 cut(s) 586, 835, 960
BspCNI CTCAG 3 cut(s) 244, 625, 866
BspHI TCATGA 1 cut(s) 61
BspMI ACCTGC 1 cut(s) 929
BspPI GGATC 2 cut(s) 758, 970
BspQI GCTCTTC 1 cut(s) 372
BspTNI GGTCTC 1 cut(s) 364
BsrDI GCAATG 1 cut(s) 76
BsrI ACTGG 4 cut(s) 400, 696, 726, 998
BssECI CCNNGG 1 cut(s) 1116
BssMI GATC 3 cut(s) 116, 750, 962
BssT1I CCWWGG 1 cut(s) 1116
Bst2UI CCWGG 1 cut(s) 706
Bst4CI ACNGT 3 cut(s) 262, 652, 822
Bst6I CTCTTC 2 cut(s) 372, 1008
BstC8I GCNNGC 2 cut(s) 384, 812
BstDEI CTNAG 6 cut(s) 252, 321, 494, 612, 746, 853
BstENI CCTNNNNNAGG 1 cut(s) 221
BstF5I GGATG 8 cut(s) 139, 304, 396, 553, 597, 646, 809, 831
BstHHI GCGC 1 cut(s) 1087
BstKTI GATC 3 cut(s) 119, 753, 965
BstMAI GTCTC 2 cut(s) 364, 510
BstMBI GATC 3 cut(s) 116, 750, 962
BstNI CCWGG 1 cut(s) 706
BstSCI CCNGG 1 cut(s) 704
BstSFI CTRYAG 1 cut(s) 1027
BstSLI GKGCMC 1 cut(s) 515
BstV1I GCAGC 3 cut(s) 398, 565, 944
BstV2I GAAGAC 1 cut(s) 288
BstX2I RGATCY 2 cut(s) 750, 962
BstYI RGATCY 2 cut(s) 750, 962
BsuI GTATCC 1 cut(s) 1122
BtsCI GGATG 8 cut(s) 139, 304, 396, 553, 597, 646, 809, 831
BtsIMutI CAGTG 1 cut(s) 719
BveI ACCTGC 1 cut(s) 929
Cac8I GCNNGC 2 cut(s) 384, 812
CciI TCATGA 1 cut(s) 61
CfoI GCGC 1 cut(s) 1087
Cfr13I GGNCC 1 cut(s) 482
Csp6I GTAC 1 cut(s) 1195
CviAII CATG 3 cut(s) 62, 799, 878
CviQI GTAC 1 cut(s) 1195
DdeI CTNAG 6 cut(s) 252, 321, 494, 612, 746, 853
DpnI GATC 3 cut(s) 118, 752, 964
DpnII GATC 3 cut(s) 116, 750, 962
DrdI GACNNNNNNGTC 1 cut(s) 489
DriI GACNNNNNGTC 1 cut(s) 429
DseDI GACNNNNNNGTC 1 cut(s) 489
Eam1104I CTCTTC 2 cut(s) 372, 1008
Eam1105I GACNNNNNGTC 1 cut(s) 429
EarI CTCTTC 2 cut(s) 372, 1008
Ecl136II GAGCTC 3 cut(s) 108, 183, 249
Eco130I CCWWGG 1 cut(s) 1116
Eco24I GRGCYC 3 cut(s) 110, 185, 251
Eco31I GGTCTC 1 cut(s) 364
Eco47I GGWCC 1 cut(s) 482
Eco53kI GAGCTC 3 cut(s) 108, 183, 249
Eco57I CTGAAG 3 cut(s) 156, 396, 647
EcoICRI GAGCTC 3 cut(s) 108, 183, 249
EcoNI CCTNNNNNAGG 1 cut(s) 221
EcoRII CCWGG 1 cut(s) 704
EcoT14I CCWWGG 1 cut(s) 1116
EcoT38I GRGCYC 3 cut(s) 110, 185, 251
ErhI CCWWGG 1 cut(s) 1116
FaeI CATG 3 cut(s) 65, 802, 881
FatI CATG 3 cut(s) 61, 798, 877
FauI CCCGC 1 cut(s) 842
FauNDI CATATG 1 cut(s) 867
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 3 cut(s) 387, 579, 958
FokI GGATG 8 cut(s) 146, 311, 383, 560, 604, 653, 816, 838
FriOI GRGCYC 3 cut(s) 110, 185, 251
Fsp4HI GCNGC 3 cut(s) 387, 579, 958
FspBI CTAG 2 cut(s) 426, 606
GlaI GCGC 1 cut(s) 1086
GluI GCNGC 3 cut(s) 387, 579, 958
HapII CCGG 1 cut(s) 589
HhaI GCGC 1 cut(s) 1087
Hin1II CATG 3 cut(s) 65, 802, 881
Hin6I GCGC 1 cut(s) 1085
HinP1I GCGC 1 cut(s) 1085
HinfI GANTC 5 cut(s) 164, 230, 503, 679, 1188
HpaII CCGG 1 cut(s) 589
HphI GGTGA 3 cut(s) 575, 664, 953
Hpy166II GTNNAC 1 cut(s) 553
Hpy188I TCNGA 6 cut(s) 253, 376, 423, 684, 781, 917
Hpy188III TCNNGA 6 cut(s) 25, 39, 62, 563, 614, 842
Hpy8I GTNNAC 1 cut(s) 553
Hpy99I CGWCG 1 cut(s) 935
HpyAV CCTTC 4 cut(s) 340, 434, 622, 1123
HpyCH4III ACNGT 3 cut(s) 262, 652, 822
HpyCH4V TGCA 3 cut(s) 155, 595, 1067
HpyF3I CTNAG 6 cut(s) 252, 321, 494, 612, 746, 853
Hsp92II CATG 3 cut(s) 65, 802, 881
HspAI GCGC 1 cut(s) 1085
Kzo9I GATC 3 cut(s) 116, 750, 962
LguI GCTCTTC 1 cut(s) 372
LmnI GCTCC 4 cut(s) 78, 105, 469, 807
Lsp1109I GCAGC 3 cut(s) 398, 565, 944
LweI GCATC 4 cut(s) 264, 312, 582, 1076
MaeI CTAG 2 cut(s) 426, 606
MaeIII GTNAC 4 cut(s) 190, 262, 316, 1000
MalI GATC 3 cut(s) 118, 752, 964
MboI GATC 3 cut(s) 116, 750, 962
MflI RGATCY 2 cut(s) 750, 962
MhlI GDGCHC 6 cut(s) 110, 185, 251, 515, 721, 1167
MluCI AATT 8 cut(s) 142, 208, 350, 444, 538, 558, 888, 923
MlyI GAGTC 1 cut(s) 512
MmeI TCCRAC 1 cut(s) 1058
MnlI CCTC 9 cut(s) 8, 217, 247, 407, 669, 849, 862, 1134, 1138
MroXI GAANNNNTTC 1 cut(s) 926
MseI TTAA 6 cut(s) 177, 243, 447, 891, 1050, 1213
MslI CAYNNNNRTG 1 cut(s) 124
MspI CCGG 1 cut(s) 589
MspR9I CCNGG 1 cut(s) 706
MvaI CCWGG 1 cut(s) 706
NdeI CATATG 1 cut(s) 867
NdeII GATC 3 cut(s) 116, 750, 962
NlaIII CATG 3 cut(s) 65, 802, 881
PagI TCATGA 1 cut(s) 61
PaqCI CACCTGC 1 cut(s) 929
PciSI GCTCTTC 1 cut(s) 372
PdmI GAANNNNTTC 1 cut(s) 926
PfeI GAWTC 4 cut(s) 164, 230, 679, 1188
PkrI GCNGC 3 cut(s) 388, 580, 959
PleI GAGTC 1 cut(s) 511
PpsI GAGTC 1 cut(s) 511
Psp124BI GAGCTC 3 cut(s) 110, 185, 251
Psp6I CCWGG 1 cut(s) 704
PspGI CCWGG 1 cut(s) 704
PspPI GGNCC 1 cut(s) 482
PsuI RGATCY 2 cut(s) 750, 962
RsaI GTAC 1 cut(s) 1196
RsaNI GTAC 1 cut(s) 1195
RseI CAYNNNNRTG 1 cut(s) 124
SacI GAGCTC 3 cut(s) 110, 185, 251
SapI GCTCTTC 1 cut(s) 372
SaqAI TTAA 6 cut(s) 177, 243, 447, 891, 1050, 1213
SatI GCNGC 3 cut(s) 387, 579, 958
Sau3AI GATC 3 cut(s) 116, 750, 962
Sau96I GGNCC 1 cut(s) 482
SchI GAGTC 1 cut(s) 512
ScrFI CCNGG 1 cut(s) 706
SduI GDGCHC 6 cut(s) 110, 185, 251, 515, 721, 1167
SfaNI GCATC 4 cut(s) 264, 312, 582, 1076
SfcI CTRYAG 1 cut(s) 1027
SinI GGWCC 1 cut(s) 482
SmiMI CAYNNNNRTG 1 cut(s) 124
Sse9I AATT 8 cut(s) 142, 208, 350, 444, 538, 558, 888, 923
SsiI CCGC 3 cut(s) 586, 835, 960
SspMI CTAG 2 cut(s) 426, 606
SstI GAGCTC 3 cut(s) 110, 185, 251
StyD4I CCNGG 1 cut(s) 704
StyI CCWWGG 1 cut(s) 1116
TaaI ACNGT 3 cut(s) 262, 652, 822
TaqI TCGA 4 cut(s) 452, 858, 930, 1139
TaqII GACCGA 1 cut(s) 346
TasI AATT 8 cut(s) 142, 208, 350, 444, 538, 558, 888, 923
TatI WGTACW 1 cut(s) 1194
TfiI GAWTC 4 cut(s) 164, 230, 679, 1188
Tru1I TTAA 6 cut(s) 177, 243, 447, 891, 1050, 1213
Tru9I TTAA 6 cut(s) 177, 243, 447, 891, 1050, 1213
TscAI CASTG 1 cut(s) 726
TseI GCWGC 3 cut(s) 386, 578, 957
TspDTI ATGAA 4 cut(s) 150, 156, 453, 984
TspRI CASTG 1 cut(s) 726
VpaK11BI GGWCC 1 cut(s) 482
XagI CCTNNNNNAGG 1 cut(s) 221
XapI RAATTY 2 cut(s) 350, 538
XmiI GTMKAC 1 cut(s) 552
XmnI GAANNNNTTC 1 cut(s) 926
XspI CTAG 2 cut(s) 426, 606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.