Rh3DG167000

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000358
Physical Location & Seq
Reverse (-)
14525289 .. 14528546
3258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG167000.1

Sequence Viewer

Length: 1899 bp
ATGGATGCCCTCTGTAACCATGAACTAGACCTAATCTTGAACTGGGTTAAGGACACAGACGATAGAAAATCATTCTCTCAGGTCAGTAAGCGATTGTGGGCAGTGGAGCGTCTGAATCGATCATCCATTCGCCTTCTCGAACTCATTCGTCTCCCTCGATTACTTGATAGATTTCCAAACTTGGTCACATTCCAAACATCCCTGCCTCTAAGCAACGCTGACCTCGAATTATTAGCCCAAGGATGTCCCAAACTAGAGGTCATCGACCTTGGAATACCAGCATTGTGCTACATAAAAGTTGGGACCCAAGGTCTATGCACACTAGCAAATAGGTGTCCCAAGTTATCCAAGGTTTCACTTCGTCGGAGGAGTATGATGAGAGATGAGCATGATGGAATTGTGTCGTTCATACCTTTAGCGGATAACTTGAAGCACTTGGATTTGGGATACGTTGTGTTGGTTTCTGACAAAACCCTTGTAGCAATGGGGTCCTCAAGTTGTCCGATTACCGTTTTGAATTTGGAAAGCTGTAACATTACGGATTGTGGATTGAGATTTTTGTCAAATGGGTCTTGCTCAAAAACCATAAAGGAATTGGTCCTTGCAAAGTGTCAGGGAATCACTGATTCTGGGGTCTCGCTCTTGCAGAAGATGTGTGCCTTGGAGGAGCTAAATTTGGCTCATTGTCACCAAGTCACTGACGTTGGAGGTGTGGCAATCTCCGCAATTCGAACCCTCAAGAAACTGCACTTTGCTAGGAGACCCAAAGTGACAGCTTGGGGACCCACAGTGACAGACCGCACCATTCTTGCTCTCGCCGAGAATTGCCTCAACTTGGAAATGCTTGATTTGAGTGGTAATAAATTCGTGACCGGAGTTGGTATTCGTGCATTTTTGGGTCACAAGTGCTTACAATCCCTTGATCTACGCTATATTTGGGTTTATGTTAGTGGATCTGATCTGGAAGACCTAGCGCTTGCATGCCCGTCATTGAAGTCTATACTAGTAGAGGGTGGATGGAGAAAAAGATTGGTGGGTGAAATGCAAGACAGCACTGTTAGCAGATTCGTGAGATTTCCAAACTTAGTCACATTCCAAACATCCGTGTCTATAAGCAACGCTGACCTCGAATTATTAGCCCAAAGATGTCCCAAACTTGAGGTCATCGACCTTACAACACCGGTGCGGTCCTTTAGTGTAGTTGGGACCCGAGGTCTATGCACACTAGCAAATAAGTGTCCCAGATTATCCAAGGTTGTGCTTCGTGGGAGATATTATTATAAGATTGAGGATGATGGAATTGTGTCTTTCATAACTTTAGCGGATAACTTGAAGCATTTGAATTTGGAATTGTGTACGCTGGTTTCTGACAAAACCCTTGAAGCAATTGGGTCCTCAAGTTGTCCGATTACCGTTTTGAAATTGGAAAGCTGTGACATTACGGATTGTGGATTGAGATTTTTGACAAATGGGTCTTGCTCAAAAACCATAAAGGAATTGGTCCTTAAGGGGTGTCATGGAATCACTGATTCTGGGGTCTCACTCTTGCAGAAGATGTGTGTCTTGGAGGAGCTAAATTTGACTCATTGTCGGCGAGTCACTGAAGTTGGAGGCGTGGCGATCTCCGCAATTCTAACCCTCAAGAAATTGAACTTTGCTTGGGGCCCCAAAGTCACAGACCGCACCATTCTCGCTCTCGCTGAGAATTGCCTCAACTTAGAGACGCTTAATTTGAGAGGTAATGGATTCGTGACCGGAGTTGGTGTTCGTGCATTTTTAAGTCACAAACGCTTACAATCCCTTGATCTACGCTACATTCGGATTCATGTTAGTGGATCTGATTTGGAAGACCTAGTGCTTGCATGCCCATCATTGAAGTCTATACTGGTAGAGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

632

Amino Acids

69.68

Weight (kDa)

8.62

Isoelectric Point (pI)

36.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 108 - 216 2e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 230 - 438 3.4e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 440 - 518 7.9e-10 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 521 - 622 8.4e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000358)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G35670
fragaria_vesca FvH4_1g05120 FvH4_1g05120 FvH4_2g32511 FvH4_2g32520 FvH4_2g32530 FvH4_2g32540 FvH4_2g32590 FvH4_2g32600 FvH4_2g32610 FvH4_2g32630 FvH4_2g34980 FvH4_2g34990 FvH4_2g35000 FvH4_2g35530 FvH4_3g30491 FvH4_5g19260 FvH4_5g19260 FvH4_5g33281 FvH4_6g06400 FvH4_6g07350 FvH4_6g07350 FvH4_6g07350 FvH4_6g10172 FvH4_6g10180 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g11570 FvH4_6g15310 FvH4_6g41671 FvH4_6g41680 FvH4_6g41680
malus_domestica MD09G1117800.v1.1 MD15G1093400.v1.1 MD17G1109100.v1.1
prunus_persica Prupe.1G448200_v2.0.a1 Prupe.3G206100_v2.0.a1 Prupe.3G206100_v2.0.a1
pyrus_communis pycom09g04310 pycom17g10160
rosa_chinensis RchiOBHm_Chr2g0157391 RchiOBHm_Chr2g0157401 RchiOBHm_Chr3g0468781 RchiOBHm_Chr6g0306251 RchiOBHm_Chr6g0307021 RchiOBHm_Chr6g0307031
rosa_laevigata RLG00000010745 RLG00000010746 RLG00000010811 RLG00000012028 RLG00000020986 RLG00000024410
rosa_multiflora Rmu_co8477457.1_g000001 Rmu_sc0000126.1_g000004 Rmu_sc0000195.1_g000016 Rmu_sc0001639.1_g000026 Rmu_sc0001639.1_g000027 Rmu_sc0001639.1_g000028 Rmu_sc0005634.1_g000011 Rmu_sc0005634.1_g000012 Rmu_sc0017002.1_g000001 Rmu_sc0022075.1_g000001
rosa_roxburghii Rroxscaffold_2G00092220 Rroxscaffold_2G00092230 Rroxscaffold_6G00412570 Rroxscaffold_6G00412580 Rroxscaffold_7G00161250 Rroxscaffold_7G00161270
rosa_rugosa Rorug02G0460900 Rorug02G0461000 Rorug03G0096400 Rorug03G0096400 Rorug06G0348200 Rorug06G0348400 Rorug06G0355000 Rorug06G0355100
rosa_samantha Rh2AG525300 Rh2AG525400 Rh2BG539400 Rh2CG510000 Rh2DG548500 Rh3AG145800 Rh3DG167000 Rh6BG433900 Rh6BG434000 Rh6BG440200 Rh6BG440600 Rh6CG353800 Rh6CG474800 Rh6CG475100 Rh6CG482000 Rh6CG482100 Rh6DG461100 Rh6DG461300 Rh6DG461400 Rh6DG468300 Rh6DG468400
rosa_wichuraiana Rw2G043480 Rw2G043490 Rw3G013740 Rw6G040150 Rw6G040670 Rw6G040680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1281
AasI GACNNNNNNGTC 1 cut(s) 1471
AciI CCGC 7 cut(s) 419, 723, 799, 1186, 1322, 1626, 1681
AclWI GGATC 2 cut(s) 961, 1843
AcsI RAATTY 5 cut(s) 517, 673, 863, 1342, 1576
AcuI CTGAAG 1 cut(s) 1623
AfaI GTAC 1 cut(s) 1357
AfeI AGCGCT 1 cut(s) 975
AfiI CCNNNNNNNGG 1 cut(s) 835
AflII CTTAAG 1 cut(s) 1505
AgeI ACCGGT 1 cut(s) 1180
AhdI GACNNNNNGTC 3 cut(s) 309, 1212, 1587
AhlI ACTAGT 1 cut(s) 1003
AloI GAACNNNNNNTCC 2 cut(s) 1749, 1781
AluBI AGCT 5 cut(s) 528, 670, 776, 1431, 1573
AluI AGCT 5 cut(s) 528, 670, 776, 1431, 1573
Alw26I GTCTC 5 cut(s) 155, 640, 754, 1543, 1715
AlwI GGATC 2 cut(s) 961, 1843
Ama87I CYCGRG 1 cut(s) 1209
Aor51HI AGCGCT 1 cut(s) 975
AoxI GGCC 1 cut(s) 1663
ApaI GGGCCC 1 cut(s) 1667
ApoI RAATTY 5 cut(s) 517, 673, 863, 1342, 1576
ArsI GACNNNNNNTTYG 6 cut(s) 243, 275, 1146, 1178, 1714, 1746
AsiGI ACCGGT 1 cut(s) 1180
Asp700I GAANNNNTTC 1 cut(s) 144
AspLEI GCGC 1 cut(s) 976
AsuHPI GGTGA 2 cut(s) 680, 1049
AsuII TTCGAA 1 cut(s) 730
AvaI CYCGRG 1 cut(s) 1209
AvaII GGWCC 8 cut(s) 303, 489, 598, 782, 1188, 1206, 1392, 1501
BaeGI GKGCMC 1 cut(s) 1667
BanII GRGCYC 1 cut(s) 1667
BbsI GAAGAC 2 cut(s) 972, 1854
BccI CCATC 4 cut(s) 386, 1011, 1289, 1876
BcgI CGANNNNNNTGC 4 cut(s) 1200, 1234, 1672, 1706
BciVI GTATCC 1 cut(s) 440
BcoDI GTCTC 5 cut(s) 155, 640, 754, 1543, 1715
BcuI ACTAGT 1 cut(s) 1003
BfaI CTAG 8 cut(s) 26, 254, 323, 756, 971, 1004, 1226, 1853
BfoI RGCGCY 1 cut(s) 977
BfrI CTTAAG 1 cut(s) 1505
BfuI GTATCC 1 cut(s) 440
Bme18I GGWCC 8 cut(s) 303, 489, 598, 782, 1188, 1206, 1392, 1501
BmeRI GACNNNNNGTC 3 cut(s) 309, 1212, 1587
BmeT110I CYCGRG 1 cut(s) 1209
BmrI ACTGGG 1 cut(s) 52
BmuI ACTGGG 1 cut(s) 52
BpiI GAAGAC 2 cut(s) 972, 1854
Bpu14I TTCGAA 1 cut(s) 730
BpuEI CTTGAG 5 cut(s) 478, 722, 1178, 1381, 1625
Bsa29I ATCGAT 1 cut(s) 118
BsaI GGTCTC 3 cut(s) 640, 754, 1543
BsaJI CCNNGG 7 cut(s) 238, 268, 307, 348, 660, 1210, 1251
BsaWI WCCGGW 3 cut(s) 872, 1180, 1754
BsaXI ACNNNNNCTCC 2 cut(s) 1749, 1779
Bsc4I CCNNNNNNNGG 1 cut(s) 835
Bse118I RCCGGY 1 cut(s) 1180
Bse1I ACTGG 2 cut(s) 47, 1890
Bse3DI GCAATG 1 cut(s) 489
BseCI ATCGAT 1 cut(s) 118
BseDI CCNNGG 7 cut(s) 238, 268, 307, 348, 660, 1210, 1251
BseGI GGATG 7 cut(s) 10, 122, 197, 248, 1022, 1100, 1297
BseLI CCNNNNNNNGG 1 cut(s) 835
BseMI GCAATG 1 cut(s) 489
BseMII CTCAG 2 cut(s) 92, 1692
BseNI ACTGG 2 cut(s) 47, 1890
BseRI GAGGAG 3 cut(s) 382, 680, 1583
BseSI GKGCMC 1 cut(s) 1667
BsgI GTGCAG 1 cut(s) 731
BshFI GGCC 1 cut(s) 1665
BshTI ACCGGT 1 cut(s) 1180
BshVI ATCGAT 1 cut(s) 118
BsiHKCI CYCGRG 1 cut(s) 1209
BsiSI CCGG 3 cut(s) 873, 1181, 1755
BslFI GGGAC 7 cut(s) 231, 316, 321, 795, 1134, 1219, 1224
BslI CCNNNNNNNGG 1 cut(s) 835
BsmAI GTCTC 5 cut(s) 155, 640, 754, 1543, 1715
BsmBI CGTCTC 2 cut(s) 155, 1715
BsmFI GGGAC 7 cut(s) 231, 316, 321, 795, 1134, 1219, 1224
BsnI GGCC 1 cut(s) 1665
Bso31I GGTCTC 3 cut(s) 640, 754, 1543
BsoBI CYCGRG 1 cut(s) 1209
Bsp119I TTCGAA 1 cut(s) 730
Bsp120I GGGCCC 1 cut(s) 1663
Bsp1286I GDGCHC 1 cut(s) 1667
Bsp143I GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
BspACI CCGC 7 cut(s) 419, 723, 799, 1186, 1322, 1626, 1681
BspANI GGCC 1 cut(s) 1665
BspCNI CTCAG 2 cut(s) 91, 1693
BspDI ATCGAT 1 cut(s) 118
BspPI GGATC 2 cut(s) 961, 1843
BspT104I TTCGAA 1 cut(s) 730
BspTI CTTAAG 1 cut(s) 1505
BspTNI GGTCTC 3 cut(s) 640, 754, 1543
BsrDI GCAATG 1 cut(s) 489
BsrFI RCCGGY 1 cut(s) 1180
BsrI ACTGG 2 cut(s) 47, 1890
BssAI RCCGGY 1 cut(s) 1180
BssECI CCNNGG 7 cut(s) 238, 268, 307, 348, 660, 1210, 1251
BssMI GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
BssT1I CCWWGG 6 cut(s) 238, 268, 307, 348, 660, 1251
Bst4CI ACNGT 4 cut(s) 511, 790, 1057, 1414
BstAFI CTTAAG 1 cut(s) 1505
BstBI TTCGAA 1 cut(s) 730
BstC8I GCNNGC 4 cut(s) 978, 982, 1860, 1864
BstDEI CTNAG 5 cut(s) 78, 209, 1084, 1701, 1717
BstF5I GGATG 7 cut(s) 10, 122, 197, 248, 1022, 1100, 1297
BstH2I RGCGCY 1 cut(s) 977
BstHHI GCGC 1 cut(s) 976
BstKTI GATC 7 cut(s) 122, 925, 956, 961, 1623, 1807, 1838
BstMAI GTCTC 5 cut(s) 155, 640, 754, 1543, 1715
BstMBI GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
BstMWI GCNNNNNNNGC 3 cut(s) 722, 1059, 1625
BstNSI RCATGY 2 cut(s) 984, 1866
BstSLI GKGCMC 1 cut(s) 1667
BstV2I GAAGAC 2 cut(s) 972, 1854
BstX2I RGATCY 2 cut(s) 953, 1835
BstYI RGATCY 2 cut(s) 953, 1835
Bsu15I ATCGAT 1 cut(s) 118
BsuI GTATCC 1 cut(s) 440
BsuRI GGCC 1 cut(s) 1665
BsuTUI ATCGAT 1 cut(s) 118
BtsCI GGATG 7 cut(s) 10, 122, 197, 248, 1022, 1100, 1297
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 7 cut(s) 108, 621, 696, 795, 1053, 1524, 1599
Cac8I GCNNGC 4 cut(s) 978, 982, 1860, 1864
CfoI GCGC 1 cut(s) 976
Cfr10I RCCGGY 1 cut(s) 1180
ClaI ATCGAT 1 cut(s) 118
CseI GACGC 2 cut(s) 98, 1732
Csp6I GTAC 1 cut(s) 1356
CspAI ACCGGT 1 cut(s) 1180
CviAII CATG 6 cut(s) 20, 389, 981, 1517, 1826, 1863
CviJI RGCY 9 cut(s) 236, 528, 670, 680, 776, 1139, 1431, 1573, 1665
CviKI_1 RGCY 9 cut(s) 236, 528, 670, 680, 776, 1139, 1431, 1573, 1665
CviQI GTAC 1 cut(s) 1356
DdeI CTNAG 5 cut(s) 78, 209, 1084, 1701, 1717
DpnI GATC 7 cut(s) 121, 924, 955, 960, 1622, 1806, 1837
DpnII GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
DrdI GACNNNNNNGTC 1 cut(s) 1471
DriI GACNNNNNGTC 3 cut(s) 309, 1212, 1587
DseDI GACNNNNNNGTC 1 cut(s) 1471
Eam1105I GACNNNNNGTC 3 cut(s) 309, 1212, 1587
Eco130I CCWWGG 6 cut(s) 238, 268, 307, 348, 660, 1251
Eco24I GRGCYC 1 cut(s) 1667
Eco31I GGTCTC 3 cut(s) 640, 754, 1543
Eco47I GGWCC 8 cut(s) 303, 489, 598, 782, 1188, 1206, 1392, 1501
Eco47III AGCGCT 1 cut(s) 975
Eco57I CTGAAG 1 cut(s) 1623
Eco88I CYCGRG 1 cut(s) 1209
EcoO109I RGGNCCY 7 cut(s) 303, 489, 782, 1206, 1392, 1663, 1664
EcoT14I CCWWGG 6 cut(s) 238, 268, 307, 348, 660, 1251
EcoT38I GRGCYC 1 cut(s) 1667
ErhI CCWWGG 6 cut(s) 238, 268, 307, 348, 660, 1251
Esp3I CGTCTC 2 cut(s) 155, 1715
FaeI CATG 6 cut(s) 23, 392, 984, 1520, 1829, 1866
FaqI GGGAC 7 cut(s) 231, 316, 321, 795, 1134, 1219, 1224
FatI CATG 6 cut(s) 19, 388, 980, 1516, 1825, 1862
FokI GGATG 7 cut(s) 17, 109, 184, 255, 1029, 1087, 1304
FriOI GRGCYC 1 cut(s) 1667
FspBI CTAG 8 cut(s) 26, 254, 323, 756, 971, 1004, 1226, 1853
GlaI GCGC 1 cut(s) 975
HaeII RGCGCY 1 cut(s) 977
HaeIII GGCC 1 cut(s) 1665
HapII CCGG 3 cut(s) 873, 1181, 1755
HgaI GACGC 2 cut(s) 98, 1732
HhaI GCGC 1 cut(s) 976
Hin1II CATG 6 cut(s) 23, 392, 984, 1520, 1829, 1866
Hin6I GCGC 1 cut(s) 974
HinP1I GCGC 1 cut(s) 974
HpaII CCGG 3 cut(s) 873, 1181, 1755
HphI GGTGA 2 cut(s) 680, 1049
Hpy166II GTNNAC 1 cut(s) 1356
Hpy188I TCNGA 9 cut(s) 114, 366, 466, 504, 958, 1369, 1407, 1821, 1840
Hpy188III TCNNGA 8 cut(s) 37, 137, 739, 868, 962, 1069, 1642, 1750
Hpy8I GTNNAC 1 cut(s) 1356
Hpy99I CGWCG 1 cut(s) 366
HpyAV CCTTC 1 cut(s) 143
HpyCH4III ACNGT 4 cut(s) 511, 790, 1057, 1414
HpyCH4IV ACGT 2 cut(s) 450, 702
HpyF10VI GCNNNNNNNGC 3 cut(s) 722, 1059, 1625
HpyF3I CTNAG 5 cut(s) 78, 209, 1084, 1701, 1717
HpySE526I ACGT 2 cut(s) 450, 702
Hsp92II CATG 6 cut(s) 23, 392, 984, 1520, 1829, 1866
HspAI GCGC 1 cut(s) 974
KflI GGGWCCC 3 cut(s) 303, 782, 1206
Kzo9I GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
LmnI GCTCC 3 cut(s) 106, 667, 1570
MaeI CTAG 8 cut(s) 26, 254, 323, 756, 971, 1004, 1226, 1853
MaeII ACGT 2 cut(s) 450, 702
MalI GATC 7 cut(s) 121, 924, 955, 960, 1622, 1806, 1837
MboI GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
MboII GAAGA 4 cut(s) 661, 977, 1564, 1859
MfeI CAATTG 1 cut(s) 1386
MflI RGATCY 2 cut(s) 953, 1835
MhlI GDGCHC 1 cut(s) 1667
MlyI GAGTC 2 cut(s) 1576, 1605
MmeI TCCRAC 3 cut(s) 344, 685, 1588
MroXI GAANNNNTTC 1 cut(s) 144
MseI TTAA 4 cut(s) 48, 1506, 1728, 1778
MslI CAYNNNNRTG 1 cut(s) 1830
MspCI CTTAAG 1 cut(s) 1505
MspI CCGG 3 cut(s) 873, 1181, 1755
MunI CAATTG 1 cut(s) 1386
MwoI GCNNNNNNNGC 3 cut(s) 722, 1059, 1625
NdeII GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
NlaIII CATG 6 cut(s) 23, 392, 984, 1520, 1829, 1866
NmeAIII GCCGAG 1 cut(s) 844
NspI RCATGY 2 cut(s) 984, 1866
NspV TTCGAA 1 cut(s) 730
PaeI GCATGC 2 cut(s) 984, 1866
PcsI WCGNNNNNNNCGW 3 cut(s) 154, 222, 1125
PdmI GAANNNNTTC 1 cut(s) 144
PfeI GAWTC 8 cut(s) 115, 618, 626, 1065, 1521, 1529, 1746, 1822
PinAI ACCGGT 1 cut(s) 1180
PleI GAGTC 2 cut(s) 1576, 1604
PpsI GAGTC 2 cut(s) 1576, 1604
PpuMI RGGWCCY 5 cut(s) 303, 489, 782, 1206, 1392
PsiI TTATAA 1 cut(s) 1281
Psp5II RGGWCCY 5 cut(s) 303, 489, 782, 1206, 1392
PspOMI GGGCCC 1 cut(s) 1663
PspPPI RGGWCCY 5 cut(s) 303, 489, 782, 1206, 1392
PsuI RGATCY 2 cut(s) 953, 1835
RsaI GTAC 1 cut(s) 1357
RsaNI GTAC 1 cut(s) 1356
RseI CAYNNNNRTG 1 cut(s) 1830
SaqAI TTAA 4 cut(s) 48, 1506, 1728, 1778
Sau3AI GATC 7 cut(s) 119, 922, 953, 958, 1620, 1804, 1835
SchI GAGTC 2 cut(s) 1576, 1605
SduI GDGCHC 1 cut(s) 1667
SfuI TTCGAA 1 cut(s) 730
SgrAI CRCCGGYG 1 cut(s) 1180
SinI GGWCC 8 cut(s) 303, 489, 598, 782, 1188, 1206, 1392, 1501
SmiMI CAYNNNNRTG 1 cut(s) 1830
SmlI CTYRAG 6 cut(s) 493, 737, 1157, 1396, 1505, 1640
SmoI CTYRAG 6 cut(s) 493, 737, 1157, 1396, 1505, 1640
SpeI ACTAGT 1 cut(s) 1003
SphI GCATGC 2 cut(s) 984, 1866
SsiI CCGC 7 cut(s) 419, 723, 799, 1186, 1322, 1626, 1681
SspMI CTAG 8 cut(s) 26, 254, 323, 756, 971, 1004, 1226, 1853
StyI CCWWGG 6 cut(s) 238, 268, 307, 348, 660, 1251
TaaI ACNGT 4 cut(s) 511, 790, 1057, 1414
TaiI ACGT 2 cut(s) 453, 705
TaqI TCGA 8 cut(s) 118, 138, 157, 225, 264, 730, 1128, 1167
TfiI GAWTC 8 cut(s) 115, 618, 626, 1065, 1521, 1529, 1746, 1822
Tru1I TTAA 4 cut(s) 48, 1506, 1728, 1778
Tru9I TTAA 4 cut(s) 48, 1506, 1728, 1778
TscAI CASTG 7 cut(s) 108, 628, 703, 795, 1060, 1531, 1606
TspDTI ATGAA 4 cut(s) 36, 397, 1300, 1814
TspGWI ACGGA 3 cut(s) 554, 1093, 1457
TspRI CASTG 7 cut(s) 108, 628, 703, 795, 1060, 1531, 1606
Vha464I CTTAAG 1 cut(s) 1505
VpaK11BI GGWCC 8 cut(s) 303, 489, 598, 782, 1188, 1206, 1392, 1501
XapI RAATTY 5 cut(s) 517, 673, 863, 1342, 1576
XceI RCATGY 2 cut(s) 984, 1866
XcmI CCANNNNNNNNNTGG 2 cut(s) 592, 1495
XmnI GAANNNNTTC 1 cut(s) 144
XspI CTAG 8 cut(s) 26, 254, 323, 756, 971, 1004, 1226, 1853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.