FvH4_2g06480

Carboxylesterase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
5385818 .. 5386945
1128 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g06480.t1

Sequence Viewer

Length: 1128 bp
ATGGCAACTTGTCTTTACGGCCTTGCCATTTCTATATGTCCAAAACCAAAAACTCCAACTCTCACTGTAAACCTCCATTCCAATCCCTCTTCTTCTTCATTCACACGTTTCTCTCTTCCTCTCAGAAAGCCCTGCATCATTATTCGCTCACAAACCTCCTCCACTTCTGCCATGGAGTCCAATCCAAGCACTGAAGTCTACAAAGACTTCTCCCCCTTCCTCATAATCTACAAAGACGGCCGCATCGAACGGCTCGCCAACACTGACGTTGTTCCAACATCGTTTGATCCCCAAACCGGTGTCCAAACCAAAGACGCTGTTATCTCAGACGAAACAGGGCTCACAGTTAGGCTCTACATCCCCAAAGCCAAAGTTACTGAAAACCCAACAAAGCTTCCTCTCCTTGTTTACTACCATGGAGGTGGGTTTTGTATGGGGTCACCATTCTGTGCCTATTACAATAGCTATGTCACTTCCTTGGTTGCCAAGACAAATGTGGTTGCTGTCTCTGTGGCTTATAGAAAGGCTCCAGAGAACCCTCTCCCAATTGGGTTTGAAGATTCATGGACCGCGCTCAAATGGGTCGGGTCCCATTTTGAGGGAAAAGGACCAGATGAGTGGCTGAATAACTATGCTGATTTTGGGAAAGTGTTCTTGGGTGGTGATAGTGCTGGTGCTAATATAGCACATCACATGGGTTTGAGAATTGGGTATGAGGGTTTGGTTGGTGTGAAGCTCAATGGGGTTGTTTTAGTGCATCCCTATTTTTGGGGGTCAGAACCACTTGGGGATGAACCCACTGAGGCTGAGAATAGAGCAATGGCTGAAGGTATATGGAGGTTTGCATTTCCGACCACCAGTGGGGCGGATGATCCGTTTATAAACCCGGGTAAGGATCCGAAATTGGGGAAGCTGGCGGCGGAGAGAGTGCTGGTTTTTGTTGCTGAGAAGGATGGGTTGATGCATAGGGGGTGGCATTACAGTGAGTTGTTGAAGAAGAGTGAGTGGAGTGGGAGTGTGGAGGTTGTAGAGTCTAAGGGGGAGGATCATGTCTTTCACTTGAACAATCCAACTGGAGATAATGCTGTGGCTCTGATGAAGGAGATTGTTTCCTTCATCAATGCCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

376

Amino Acids

41.05

Weight (kDa)

6.08

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 102 - 230 2.1e-09 Carboxylesterase family
BD-FAE PF20434 128 - 235 1.8e-07 BD-FAE
Abhydrolase_3 PF07859 135 - 353 3.2e-48 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 881
AccI GTMKAC 1 cut(s) 198
AccII CGCG 1 cut(s) 572
AciI CCGC 5 cut(s) 241, 570, 866, 917, 920
AclWI GGATC 5 cut(s) 281, 866, 890, 903, 1053
AcoI YGGCCR 1 cut(s) 238
AcuI CTGAAG 2 cut(s) 213, 846
AfiI CCNNNNNNNGG 6 cut(s) 296, 598, 768, 861, 892, 905
AflIII ACRYGT 1 cut(s) 104
AgeI ACCGGT 1 cut(s) 296
AgsI TTSAA 3 cut(s) 557, 994, 1063
AjuI GAANNNNNNNTTGG 2 cut(s) 638, 670
AluBI AGCT 4 cut(s) 394, 465, 736, 913
AluI AGCT 4 cut(s) 394, 465, 736, 913
Alw26I GTCTC 1 cut(s) 511
AlwI GGATC 5 cut(s) 281, 866, 890, 903, 1053
Ama87I CYCGRG 1 cut(s) 886
AoxI GGCC 2 cut(s) 19, 238
AsiGI ACCGGT 1 cut(s) 296
Asp700I GAANNNNTTC 1 cut(s) 650
AspLEI GCGC 1 cut(s) 574
AspS9I GGNCC 3 cut(s) 567, 588, 608
AsuC2I CCSGG 2 cut(s) 887, 888
AsuHPI GGTGA 2 cut(s) 432, 674
AvaI CYCGRG 1 cut(s) 886
AvaII GGWCC 3 cut(s) 567, 588, 608
BamHI GGATCC 1 cut(s) 895
BanII GRGCYC 1 cut(s) 342
BccI CCATC 1 cut(s) 947
BceAI ACGGC 3 cut(s) 34, 253, 266
BcnI CCSGG 2 cut(s) 887, 888
BcoDI GTCTC 1 cut(s) 511
BisI GCNGC 2 cut(s) 241, 918
BlsI GCNGC 2 cut(s) 242, 919
Bme1390I CCNGG 2 cut(s) 887, 888
Bme18I GGWCC 3 cut(s) 567, 588, 608
BmeT110I CYCGRG 1 cut(s) 886
BmgT120I GGNCC 3 cut(s) 567, 588, 608
BmiI GGNNCC 4 cut(s) 528, 589, 590, 897
BmrFI CCNGG 2 cut(s) 887, 888
BmsI GCATC 4 cut(s) 144, 252, 766, 951
BpmI CTGGAG 2 cut(s) 513, 1095
BpuMI CCSGG 2 cut(s) 887, 888
BsaJI CCNNGG 4 cut(s) 171, 415, 477, 886
BsaWI WCCGGW 1 cut(s) 296
BsaXI ACNNNNNCTCC 2 cut(s) 1000, 1030
Bsc4I CCNNNNNNNGG 6 cut(s) 296, 598, 768, 861, 892, 905
Bse118I RCCGGY 1 cut(s) 296
Bse1I ACTGG 2 cut(s) 858, 1078
Bse3DI GCAATG 1 cut(s) 825
BseDI CCNNGG 4 cut(s) 171, 415, 477, 886
BseGI GGATG 5 cut(s) 357, 757, 796, 874, 958
BseLI CCNNNNNNNGG 6 cut(s) 296, 598, 768, 861, 892, 905
BseMI GCAATG 1 cut(s) 825
BseMII CTCAG 5 cut(s) 136, 339, 792, 798, 936
BseNI ACTGG 2 cut(s) 858, 1078
BseRI GAGGAG 1 cut(s) 148
BseX3I CGGCCG 1 cut(s) 238
Bsh1236I CGCG 1 cut(s) 572
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 2 cut(s) 21, 240
BshTI ACCGGT 1 cut(s) 296
BsiEI CGRYCG 1 cut(s) 241
BsiHKCI CYCGRG 1 cut(s) 886
BsiSI CCGG 2 cut(s) 297, 887
BslFI GGGAC 1 cut(s) 574
BslI CCNNNNNNNGG 6 cut(s) 296, 598, 768, 861, 892, 905
BsmAI GTCTC 1 cut(s) 511
BsmFI GGGAC 1 cut(s) 574
BsnI GGCC 2 cut(s) 21, 240
BsoBI CYCGRG 1 cut(s) 886
Bsp1286I GDGCHC 1 cut(s) 342
Bsp143I GATC 4 cut(s) 286, 871, 895, 1045
Bsp19I CCATGG 2 cut(s) 171, 415
BspACI CCGC 5 cut(s) 241, 570, 866, 917, 920
BspANI GGCC 2 cut(s) 21, 240
BspCNI CTCAG 5 cut(s) 135, 338, 793, 799, 937
BspFNI CGCG 1 cut(s) 572
BspLI GGNNCC 4 cut(s) 528, 589, 590, 897
BspPI GGATC 5 cut(s) 281, 866, 890, 903, 1053
BsrDI GCAATG 1 cut(s) 825
BsrFI RCCGGY 1 cut(s) 296
BsrI ACTGG 2 cut(s) 858, 1078
BssAI RCCGGY 1 cut(s) 296
BssECI CCNNGG 4 cut(s) 171, 415, 477, 886
BssMI GATC 4 cut(s) 286, 871, 895, 1045
BssT1I CCWWGG 3 cut(s) 171, 415, 477
Bst4CI ACNGT 3 cut(s) 67, 346, 983
Bst6I CTCTTC 3 cut(s) 94, 120, 992
BstC8I GCNNGC 2 cut(s) 255, 915
BstDEI CTNAG 6 cut(s) 122, 325, 801, 807, 945, 1035
BstDSI CCRYGG 2 cut(s) 171, 415
BstEII GGTNACC 1 cut(s) 438
BstF5I GGATG 5 cut(s) 357, 757, 796, 874, 958
BstFNI CGCG 1 cut(s) 572
BstHHI GCGC 1 cut(s) 574
BstKTI GATC 4 cut(s) 289, 874, 898, 1048
BstMAI GTCTC 1 cut(s) 511
BstMBI GATC 4 cut(s) 286, 871, 895, 1045
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 1 cut(s) 683
BstPI GGTNACC 1 cut(s) 438
BstSCI CCNGG 2 cut(s) 885, 886
BstUI CGCG 1 cut(s) 572
BstX2I RGATCY 1 cut(s) 895
BstXI CCANNNNNNTGG 2 cut(s) 422, 618
BstYI RGATCY 1 cut(s) 895
BstZI CGGCCG 1 cut(s) 238
BsuRI GGCC 2 cut(s) 21, 240
BtgI CCRYGG 2 cut(s) 171, 415
BtsCI GGATG 5 cut(s) 357, 757, 796, 874, 958
BtsIMutI CAGTG 6 cut(s) 63, 189, 261, 798, 865, 988
Cac8I GCNNGC 2 cut(s) 255, 915
CfoI GCGC 1 cut(s) 574
Cfr10I RCCGGY 1 cut(s) 296
Cfr13I GGNCC 3 cut(s) 567, 588, 608
Cfr9I CCCGGG 1 cut(s) 886
CseI GACGC 1 cut(s) 323
CspAI ACCGGT 1 cut(s) 296
CviAII CATG 5 cut(s) 172, 416, 564, 694, 1049
DdeI CTNAG 6 cut(s) 122, 325, 801, 807, 945, 1035
DpnI GATC 4 cut(s) 288, 873, 897, 1047
DpnII GATC 4 cut(s) 286, 871, 895, 1045
EaeI YGGCCR 1 cut(s) 238
EagI CGGCCG 1 cut(s) 238
Eam1104I CTCTTC 3 cut(s) 94, 120, 992
EarI CTCTTC 3 cut(s) 94, 120, 992
EciI GGCGGA 2 cut(s) 881, 935
EclXI CGGCCG 1 cut(s) 238
Eco130I CCWWGG 3 cut(s) 171, 415, 477
Eco24I GRGCYC 1 cut(s) 342
Eco47I GGWCC 3 cut(s) 567, 588, 608
Eco52I CGGCCG 1 cut(s) 238
Eco57I CTGAAG 2 cut(s) 213, 846
Eco88I CYCGRG 1 cut(s) 886
Eco91I GGTNACC 1 cut(s) 438
EcoO109I RGGNCCY 1 cut(s) 588
EcoO65I GGTNACC 1 cut(s) 438
EcoT14I CCWWGG 3 cut(s) 171, 415, 477
EcoT22I ATGCAT 1 cut(s) 966
EcoT38I GRGCYC 1 cut(s) 342
ErhI CCWWGG 3 cut(s) 171, 415, 477
FaeI CATG 5 cut(s) 175, 419, 567, 697, 1052
FaqI GGGAC 1 cut(s) 574
FatI CATG 5 cut(s) 171, 415, 563, 693, 1048
FblI GTMKAC 1 cut(s) 198
Fnu4HI GCNGC 2 cut(s) 241, 918
FokI GGATG 5 cut(s) 344, 744, 803, 881, 965
FriOI GRGCYC 1 cut(s) 342
Fsp4HI GCNGC 2 cut(s) 241, 918
GlaI GCGC 1 cut(s) 573
GluI GCNGC 2 cut(s) 241, 918
GsuI CTGGAG 2 cut(s) 513, 1095
HaeIII GGCC 2 cut(s) 21, 240
HapII CCGG 2 cut(s) 297, 887
HgaI GACGC 1 cut(s) 323
HhaI GCGC 1 cut(s) 574
Hin1II CATG 5 cut(s) 175, 419, 567, 697, 1052
Hin6I GCGC 1 cut(s) 572
HinP1I GCGC 1 cut(s) 572
HindIII AAGCTT 1 cut(s) 392
HinfI GANTC 3 cut(s) 176, 560, 1031
HpaII CCGG 2 cut(s) 297, 887
HphI GGTGA 2 cut(s) 432, 674
Hpy166II GTNNAC 3 cut(s) 70, 199, 409
Hpy188I TCNGA 6 cut(s) 125, 328, 778, 852, 900, 1095
Hpy188III TCNNGA 1 cut(s) 530
Hpy8I GTNNAC 3 cut(s) 70, 199, 409
HpyAV CCTTC 5 cut(s) 226, 821, 943, 1093, 1123
HpyCH4III ACNGT 3 cut(s) 67, 346, 983
HpyCH4IV ACGT 2 cut(s) 106, 267
HpyCH4V TGCA 4 cut(s) 135, 757, 845, 964
HpyF10VI GCNNNNNNNGC 1 cut(s) 683
HpyF3I CTNAG 6 cut(s) 122, 325, 801, 807, 945, 1035
HpySE526I ACGT 2 cut(s) 106, 267
Hsp92II CATG 5 cut(s) 175, 419, 567, 697, 1052
HspAI GCGC 1 cut(s) 572
KflI GGGWCCC 1 cut(s) 588
Kzo9I GATC 4 cut(s) 286, 871, 895, 1045
LmnI GCTCC 1 cut(s) 532
LweI GCATC 4 cut(s) 144, 252, 766, 951
MaeII ACGT 2 cut(s) 106, 267
MaeIII GTNAC 3 cut(s) 373, 438, 469
MalI GATC 4 cut(s) 288, 873, 897, 1047
MboI GATC 4 cut(s) 286, 871, 895, 1045
MboII GAAGA 7 cut(s) 81, 84, 87, 107, 569, 1006, 1009
MfeI CAATTG 1 cut(s) 546
MflI RGATCY 1 cut(s) 895
MhlI GDGCHC 1 cut(s) 342
MluCI AATT 3 cut(s) 546, 705, 902
MlyI GAGTC 2 cut(s) 185, 1040
MmeI TCCRAC 4 cut(s) 80, 299, 875, 1094
Mph1103I ATGCAT 1 cut(s) 966
MroXI GAANNNNTTC 1 cut(s) 650
MslI CAYNNNNRTG 2 cut(s) 420, 981
MspI CCGG 2 cut(s) 297, 887
MspR9I CCNGG 2 cut(s) 887, 888
MunI CAATTG 1 cut(s) 546
MvnI CGCG 1 cut(s) 572
MwoI GCNNNNNNNGC 1 cut(s) 683
NciI CCSGG 2 cut(s) 887, 888
NcoI CCATGG 2 cut(s) 171, 415
NdeII GATC 4 cut(s) 286, 871, 895, 1045
NlaIII CATG 5 cut(s) 175, 419, 567, 697, 1052
NlaIV GGNNCC 4 cut(s) 528, 589, 590, 897
NmuCI GTSAC 2 cut(s) 438, 469
NsiI ATGCAT 1 cut(s) 966
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PdmI GAANNNNTTC 1 cut(s) 650
PfeI GAWTC 1 cut(s) 560
PinAI ACCGGT 1 cut(s) 296
PkrI GCNGC 2 cut(s) 242, 919
PleI GAGTC 2 cut(s) 184, 1039
PpsI GAGTC 2 cut(s) 184, 1039
PpuMI RGGWCCY 1 cut(s) 588
PsiI TTATAA 1 cut(s) 881
Psp5II RGGWCCY 1 cut(s) 588
PspEI GGTNACC 1 cut(s) 438
PspN4I GGNNCC 4 cut(s) 528, 589, 590, 897
PspPI GGNCC 3 cut(s) 567, 588, 608
PspPPI RGGWCCY 1 cut(s) 588
PsuI RGATCY 1 cut(s) 895
RseI CAYNNNNRTG 2 cut(s) 420, 981
SatI GCNGC 2 cut(s) 241, 918
Sau3AI GATC 4 cut(s) 286, 871, 895, 1045
Sau96I GGNCC 3 cut(s) 567, 588, 608
SchI GAGTC 2 cut(s) 185, 1040
ScrFI CCNGG 2 cut(s) 887, 888
SduI GDGCHC 1 cut(s) 342
SfaNI GCATC 4 cut(s) 144, 252, 766, 951
SinI GGWCC 3 cut(s) 567, 588, 608
SmaI CCCGGG 1 cut(s) 888
SmiMI CAYNNNNRTG 2 cut(s) 420, 981
Sse9I AATT 3 cut(s) 546, 705, 902
SsiI CCGC 5 cut(s) 241, 570, 866, 917, 920
StyD4I CCNGG 2 cut(s) 885, 886
StyI CCWWGG 3 cut(s) 171, 415, 477
TaaI ACNGT 3 cut(s) 67, 346, 983
TaiI ACGT 2 cut(s) 109, 270
TaqI TCGA 1 cut(s) 246
TasI AATT 3 cut(s) 546, 705, 902
TauI GCSGC 2 cut(s) 243, 920
TfiI GAWTC 1 cut(s) 560
TscAI CASTG 6 cut(s) 70, 196, 268, 805, 865, 988
TseFI GTSAC 2 cut(s) 438, 469
Tsp45I GTSAC 2 cut(s) 438, 469
TspDTI ATGAA 5 cut(s) 87, 552, 807, 1105, 1112
TspGWI ACGGA 1 cut(s) 864
TspMI CCCGGG 1 cut(s) 886
TspRI CASTG 6 cut(s) 70, 196, 268, 805, 865, 988
VpaK11BI GGWCC 3 cut(s) 567, 588, 608
XcmI CCANNNNNNNNNTGG 2 cut(s) 169, 493
XmaI CCCGGG 1 cut(s) 886
XmiI GTMKAC 1 cut(s) 198
XmnI GAANNNNTTC 1 cut(s) 650
Zsp2I ATGCAT 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.