MD10G1091200.v1.1

Carboxylesterase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
13775777 .. 13776892
1116 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1091200.v1.1.491

Sequence Viewer

Length: 1116 bp
ATGGCAACATGTTATGGCCTATCCATGTGTTTATGGCCAAAACCAAAAACCCCACCTTCATTCACAAATCTATCTTCCCCTCTCTTCCCTCTCCCTTCTCTCCCACACAGAAAACCCGACACCATCAGCTTGTCATCGTCTTCATCTGCCTCCATGGATTCAGCCTTGAGCAACGAAGTGGCTCAAGACTTCTCTCCCTTCCTCAAAATATACAAAGATGGTAGAGTGGAGAGACTTTCAGGCACTGATGTTGTTCCCACATCACTCGATCCACAAACAGGCGTCGAATGTAAAGATGCCGTGATTTCTGCCGAAACCGGCGTGTCAGCCAGACTCTACATCCCCAAAACCAAAATTACCACAAACTCAACAAAGCTTCCTCTCCTTATTTACTATCACGGGGGTGGATTTTGCATGGGGTCACCGTTTTGTGCCTACTACCACAACTATCTCACAACCCTAGTTGCCGAGGCAAATGTTGTTGCTGTCTCTGTTGATTACAGGAAGGCCCCAGAGAACCCTCTGCCTTTAGGGTATGATGATTCATGGGCTGCTCTCGGTTGGGTTCAATCCCATATTGAAGGGCAAGGGCCTGAAGAGTGGCTAAATTCATATGCTGATTTCGAAAGAGTGTTTTTTGCTGGTGACAGTGCTGGGGCTAACATAGCTCATCACATGGCTGTGAGATTAGGGCATGAGGGTTTGGTTGGTGTCAATCTCAAAGGTATTATTTTGGTGCATCCTTATTTTTGGGGGTCAGAACCAATTGAGGGTGAGACTGATGTGGTTGAGAATAGGGCAAGGGCTGAGGCTATATGGCGGTTCGCTTATCCGACTACTAGCGGAGCGGATGACCTGCTTATAAACCCGGGAAAGGATCCGAAGCTGTCGAAATTAGGGGCAGAGAGAGTGCTGGTTTGTGTTGCTGAGCAAGATGCGTTGAGGCAAAGAGGTTGGTATTATAGTGATTTATTGAGGAAAAGTGAGTGGGGAGGAAATGTGGAGGTTGTGGAGTCTAAGGAGGAGGACCATGTATTCCATTTGAACAATCCCGTTGGAGACAATGCTGTGGCTTTGCTCATGAAAATTGCTTCCTTCCTTAACCAGGATATATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

372

Amino Acids

40.7

Weight (kDa)

5.24

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 113 - 228 2.5e-09 Carboxylesterase family
BD-FAE PF20434 121 - 229 5.2e-08 BD-FAE
Abhydrolase_3 PF07859 129 - 347 2.5e-53 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 863
Acc36I ACCTGC 1 cut(s) 864
AccBSI CCGCTC 1 cut(s) 848
AciI CCGC 3 cut(s) 820, 843, 848
AclWI GGATC 3 cut(s) 263, 872, 885
AcoI YGGCCR 1 cut(s) 35
AcsI RAATTY 1 cut(s) 607
AcuI CTGAAG 1 cut(s) 615
AcyI GRCGYC 1 cut(s) 282
AfiI CCNNNNNNNGG 4 cut(s) 278, 770, 874, 1105
AflIII ACRYGT 1 cut(s) 8
AgsI TTSAA 3 cut(s) 569, 581, 1045
AjnI CCWGG 1 cut(s) 1104
AleI CACNNNNGTG 1 cut(s) 402
AluBI AGCT 4 cut(s) 129, 376, 668, 886
AluI AGCT 4 cut(s) 129, 376, 668, 886
Alw26I GTCTC 4 cut(s) 226, 493, 770, 1053
AlwI GGATC 3 cut(s) 263, 872, 885
AlwNI CAGNNNCTG 1 cut(s) 245
Ama87I CYCGRG 1 cut(s) 868
AoxI GGCC 4 cut(s) 16, 35, 507, 590
ApeKI GCWGC 1 cut(s) 551
ApoI RAATTY 1 cut(s) 607
AspS9I GGNCC 3 cut(s) 508, 590, 1027
AsuC2I CCSGG 2 cut(s) 869, 870
AsuHPI GGTGA 3 cut(s) 414, 656, 785
AsuII TTCGAA 1 cut(s) 624
AvaI CYCGRG 1 cut(s) 868
AvaII GGWCC 1 cut(s) 1027
BalI TGGCCA 1 cut(s) 37
BamHI GGATCC 1 cut(s) 877
BbsI GAAGAC 1 cut(s) 132
BbvCI CCTCAGC 1 cut(s) 807
BbvI GCAGC 1 cut(s) 538
BccI CCATC 2 cut(s) 131, 212
BceAI ACGGC 1 cut(s) 284
BciT130I CCWGG 1 cut(s) 1106
BcnI CCSGG 2 cut(s) 869, 870
BcoDI GTCTC 4 cut(s) 226, 493, 770, 1053
BfaI CTAG 2 cut(s) 461, 840
BfuAI ACCTGC 1 cut(s) 864
BisI GCNGC 1 cut(s) 552
BlpI GCTNAGC 1 cut(s) 927
BlsI GCNGC 1 cut(s) 553
Bme1390I CCNGG 3 cut(s) 869, 870, 1106
Bme18I GGWCC 1 cut(s) 1027
BmeT110I CYCGRG 1 cut(s) 868
BmgT120I GGNCC 3 cut(s) 508, 590, 1027
BmiI GGNNCC 2 cut(s) 510, 879
BmrFI CCNGG 3 cut(s) 869, 870, 1106
BmsI GCATC 3 cut(s) 286, 748, 925
BpiI GAAGAC 1 cut(s) 132
Bpu10I CCTNAGC 1 cut(s) 807
Bpu1102I GCTNAGC 1 cut(s) 927
Bpu14I TTCGAA 1 cut(s) 624
BpuEI CTTGAG 2 cut(s) 168, 187
BpuMI CCSGG 2 cut(s) 869, 870
BsaHI GRCGYC 1 cut(s) 282
BsaJI CCNNGG 3 cut(s) 153, 468, 868
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bsc4I CCNNNNNNNGG 4 cut(s) 278, 770, 874, 1105
Bse118I RCCGGY 1 cut(s) 317
BseBI CCWGG 1 cut(s) 1106
BseDI CCNNGG 3 cut(s) 153, 468, 868
BseGI GGATG 3 cut(s) 339, 739, 856
BseLI CCNNNNNNNGG 4 cut(s) 278, 770, 874, 1105
BseMII CTCAG 2 cut(s) 798, 918
BseRI GAGGAG 1 cut(s) 1037
BseXI GCAGC 1 cut(s) 538
BseYI CCCAGC 1 cut(s) 653
BshFI GGCC 4 cut(s) 18, 37, 509, 592
BsiHKCI CYCGRG 1 cut(s) 868
BsiSI CCGG 2 cut(s) 318, 869
BslI CCNNNNNNNGG 4 cut(s) 278, 770, 874, 1105
BsmAI GTCTC 4 cut(s) 226, 493, 770, 1053
BsnI GGCC 4 cut(s) 18, 37, 509, 592
BsoBI CYCGRG 1 cut(s) 868
Bsp119I TTCGAA 1 cut(s) 624
Bsp143I GATC 2 cut(s) 268, 877
Bsp1720I GCTNAGC 1 cut(s) 927
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 3 cut(s) 820, 843, 848
BspANI GGCC 4 cut(s) 18, 37, 509, 592
BspCNI CTCAG 2 cut(s) 799, 919
BspHI TCATGA 1 cut(s) 1080
BspLI GGNNCC 2 cut(s) 510, 879
BspMI ACCTGC 1 cut(s) 864
BspPI GGATC 3 cut(s) 263, 872, 885
BspT104I TTCGAA 1 cut(s) 624
BsrBI CCGCTC 1 cut(s) 848
BsrFI RCCGGY 1 cut(s) 317
BssAI RCCGGY 1 cut(s) 317
BssECI CCNNGG 3 cut(s) 153, 468, 868
BssMI GATC 2 cut(s) 268, 877
BssNI GRCGYC 1 cut(s) 282
BssT1I CCWWGG 1 cut(s) 153
Bst2UI CCWGG 1 cut(s) 1106
Bst4CI ACNGT 2 cut(s) 426, 650
Bst6I CTCTTC 2 cut(s) 89, 591
BstACI GRCGYC 1 cut(s) 282
BstBI TTCGAA 1 cut(s) 624
BstDEI CTNAG 3 cut(s) 807, 927, 1017
BstDSI CCRYGG 1 cut(s) 153
BstEII GGTNACC 1 cut(s) 420
BstENI CCTNNNNNAGG 1 cut(s) 1103
BstF5I GGATG 3 cut(s) 339, 739, 856
BstKTI GATC 2 cut(s) 271, 880
BstMAI GTCTC 4 cut(s) 226, 493, 770, 1053
BstMBI GATC 2 cut(s) 268, 877
BstMWI GCNNNNNNNGC 1 cut(s) 665
BstNI CCWGG 1 cut(s) 1106
BstNSI RCATGY 1 cut(s) 12
BstPI GGTNACC 1 cut(s) 420
BstSCI CCNGG 3 cut(s) 867, 868, 1104
BstV1I GCAGC 1 cut(s) 538
BstV2I GAAGAC 1 cut(s) 132
BstX2I RGATCY 1 cut(s) 877
BstYI RGATCY 1 cut(s) 877
BsuRI GGCC 4 cut(s) 18, 37, 509, 592
BtgI CCRYGG 1 cut(s) 153
BtsCI GGATG 3 cut(s) 339, 739, 856
BtsIMutI CAGTG 2 cut(s) 243, 655
BveI ACCTGC 1 cut(s) 864
CaiI CAGNNNCTG 1 cut(s) 245
CciI TCATGA 1 cut(s) 1080
Cfr10I RCCGGY 1 cut(s) 317
Cfr13I GGNCC 3 cut(s) 508, 590, 1027
Cfr9I CCCGGG 1 cut(s) 868
CseI GACGC 1 cut(s) 271
CviAII CATG 9 cut(s) 9, 25, 154, 415, 546, 676, 695, 1031, 1081
DdeI CTNAG 3 cut(s) 807, 927, 1017
DpnI GATC 2 cut(s) 270, 879
DpnII GATC 2 cut(s) 268, 877
EaeI YGGCCR 1 cut(s) 35
Eam1104I CTCTTC 2 cut(s) 89, 591
EarI CTCTTC 2 cut(s) 89, 591
Eco130I CCWWGG 1 cut(s) 153
Eco47I GGWCC 1 cut(s) 1027
Eco57I CTGAAG 1 cut(s) 615
Eco88I CYCGRG 1 cut(s) 868
Eco91I GGTNACC 1 cut(s) 420
EcoNI CCTNNNNNAGG 1 cut(s) 1103
EcoO109I RGGNCCY 2 cut(s) 508, 590
EcoO65I GGTNACC 1 cut(s) 420
EcoRII CCWGG 1 cut(s) 1104
EcoT14I CCWWGG 1 cut(s) 153
ErhI CCWWGG 1 cut(s) 153
FaeI CATG 9 cut(s) 12, 28, 157, 418, 549, 679, 698, 1034, 1084
FatI CATG 9 cut(s) 8, 24, 153, 414, 545, 675, 694, 1030, 1080
FauNDI CATATG 1 cut(s) 613
Fnu4HI GCNGC 1 cut(s) 552
FokI GGATG 3 cut(s) 326, 726, 863
Fsp4HI GCNGC 1 cut(s) 552
FspBI CTAG 2 cut(s) 461, 840
GluI GCNGC 1 cut(s) 552
GsaI CCCAGC 1 cut(s) 657
HaeIII GGCC 4 cut(s) 18, 37, 509, 592
HapII CCGG 2 cut(s) 318, 869
HgaI GACGC 1 cut(s) 271
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 9 cut(s) 12, 28, 157, 418, 549, 679, 698, 1034, 1084
HindIII AAGCTT 1 cut(s) 374
HinfI GANTC 4 cut(s) 158, 333, 542, 1013
HpaII CCGG 2 cut(s) 318, 869
HphI GGTGA 3 cut(s) 414, 656, 785
Hpy188I TCNGA 3 cut(s) 760, 834, 882
Hpy188III TCNNGA 2 cut(s) 185, 1081
Hpy99I CGWCG 1 cut(s) 287
HpyAV CCTTC 6 cut(s) 66, 105, 208, 499, 575, 1105
HpyCH4III ACNGT 2 cut(s) 426, 650
HpyCH4V TGCA 2 cut(s) 414, 739
HpyF10VI GCNNNNNNNGC 1 cut(s) 665
HpyF3I CTNAG 3 cut(s) 807, 927, 1017
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 9 cut(s) 12, 28, 157, 418, 549, 679, 698, 1034, 1084
Kzo9I GATC 2 cut(s) 268, 877
LmnI GCTCC 1 cut(s) 845
Lsp1109I GCAGC 1 cut(s) 538
LweI GCATC 3 cut(s) 286, 748, 925
MaeI CTAG 2 cut(s) 461, 840
MaeIII GTNAC 2 cut(s) 420, 644
MalI GATC 2 cut(s) 270, 879
MbiI CCGCTC 1 cut(s) 848
MboI GATC 2 cut(s) 268, 877
MboII GAAGA 4 cut(s) 66, 76, 132, 608
MfeI CAATTG 1 cut(s) 765
MflI RGATCY 1 cut(s) 877
MlsI TGGCCA 1 cut(s) 37
MluCI AATT 5 cut(s) 354, 607, 765, 893, 1086
MluNI TGGCCA 1 cut(s) 37
MlyI GAGTC 2 cut(s) 327, 1022
MmeI TCCRAC 2 cut(s) 857, 1036
Mox20I TGGCCA 1 cut(s) 37
MscI TGGCCA 1 cut(s) 37
MseI TTAA 1 cut(s) 1101
MslI CAYNNNNRTG 2 cut(s) 402, 680
Msp20I TGGCCA 1 cut(s) 37
MspI CCGG 2 cut(s) 318, 869
MspR9I CCNGG 3 cut(s) 869, 870, 1106
MunI CAATTG 1 cut(s) 765
MvaI CCWGG 1 cut(s) 1106
MwoI GCNNNNNNNGC 1 cut(s) 665
NciI CCSGG 2 cut(s) 869, 870
NcoI CCATGG 1 cut(s) 153
NdeI CATATG 1 cut(s) 613
NdeII GATC 2 cut(s) 268, 877
NlaIII CATG 9 cut(s) 12, 28, 157, 418, 549, 679, 698, 1034, 1084
NlaIV GGNNCC 2 cut(s) 510, 879
NmeAIII GCCGAG 1 cut(s) 493
NmuCI GTSAC 2 cut(s) 420, 644
NspI RCATGY 1 cut(s) 12
NspV TTCGAA 1 cut(s) 624
OliI CACNNNNGTG 1 cut(s) 402
PagI TCATGA 1 cut(s) 1080
PciI ACATGT 1 cut(s) 8
PfeI GAWTC 2 cut(s) 158, 542
PkrI GCNGC 1 cut(s) 553
PleI GAGTC 2 cut(s) 327, 1021
PpsI GAGTC 2 cut(s) 327, 1021
PscI ACATGT 1 cut(s) 8
PsiI TTATAA 1 cut(s) 863
Psp6I CCWGG 1 cut(s) 1104
PspEI GGTNACC 1 cut(s) 420
PspFI CCCAGC 1 cut(s) 653
PspGI CCWGG 1 cut(s) 1104
PspN4I GGNNCC 2 cut(s) 510, 879
PspPI GGNCC 3 cut(s) 508, 590, 1027
PstNI CAGNNNCTG 1 cut(s) 245
PsuI RGATCY 1 cut(s) 877
RseI CAYNNNNRTG 2 cut(s) 402, 680
SaqAI TTAA 1 cut(s) 1101
SatI GCNGC 1 cut(s) 552
Sau3AI GATC 2 cut(s) 268, 877
Sau96I GGNCC 3 cut(s) 508, 590, 1027
SchI GAGTC 2 cut(s) 327, 1022
ScrFI CCNGG 3 cut(s) 869, 870, 1106
SetI ASST 9 cut(s) 58, 131, 378, 670, 727, 858, 888, 955, 1008
SfaNI GCATC 3 cut(s) 286, 748, 925
SfuI TTCGAA 1 cut(s) 624
SinI GGWCC 1 cut(s) 1027
SmaI CCCGGG 1 cut(s) 870
SmiMI CAYNNNNRTG 2 cut(s) 402, 680
SmlI CTYRAG 2 cut(s) 166, 183
SmoI CTYRAG 2 cut(s) 166, 183
Sse9I AATT 5 cut(s) 354, 607, 765, 893, 1086
SsiI CCGC 3 cut(s) 820, 843, 848
SspMI CTAG 2 cut(s) 461, 840
StyD4I CCNGG 3 cut(s) 867, 868, 1104
StyI CCWWGG 1 cut(s) 153
TaaI ACNGT 2 cut(s) 426, 650
TaqI TCGA 4 cut(s) 267, 285, 624, 890
TasI AATT 5 cut(s) 354, 607, 765, 893, 1086
TfiI GAWTC 2 cut(s) 158, 542
Tru1I TTAA 1 cut(s) 1101
Tru9I TTAA 1 cut(s) 1101
TscAI CASTG 2 cut(s) 250, 655
TseFI GTSAC 2 cut(s) 420, 644
TseI GCWGC 1 cut(s) 551
Tsp45I GTSAC 2 cut(s) 420, 644
TspDTI ATGAA 5 cut(s) 48, 132, 534, 600, 1097
TspMI CCCGGG 1 cut(s) 868
TspRI CASTG 2 cut(s) 250, 655
VpaK11BI GGWCC 1 cut(s) 1027
XagI CCTNNNNNAGG 1 cut(s) 1103
XapI RAATTY 1 cut(s) 607
XceI RCATGY 1 cut(s) 12
XmaI CCCGGG 1 cut(s) 868
XspI CTAG 2 cut(s) 461, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.