Prupe.8G121500_v2.0.a1

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000397
Physical Location & Seq
Reverse (-)
14751231 .. 14752193
963 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G121500.1

Sequence Viewer

Length: 957 bp
ATGAGCAACGAAGAATTAGCCTATGATTTCTCTCCGATGATTAAAGTATACAAAGATGGTCGAGTTGAAAGACTCAGAGGCACAGACACAGTTCCTCCATCAACAGATCCCAAAACTGGCGTCCAATCAAAAGACGTTGTGATCTCCCAAGAACCAGCCATATCTGCAAGGCTTTACATCCCAAAATCCGCCGCCACAAGCTCACCCCAAACCAAACTCCCTCTTCTCATTTACTTCCATGGAGGCGGCTTCTGCATTGAAAGTTCATCTTCCCCCGTATATCACAACTACCTCAACGCCTTAGTCTCTGAGGCCAATGTTGTTGCAGTCTCTGTTGACTATAGGCTTGCCCCAGAGCACCCTCTGCCGGCTGCTTACGATGATTCATGGGCTGCTCTCAAATGGGTTGCTTCCCATTCTGATGGAAACGGCTCTGAAGATTGGCTAAACAGTTTTGCAGATTTCCAGCGTGTGTTTTTCTATGGGGATAGTGCGGGGGGTAATTTAGCACACAACATGGCTTTGAAAGTGGGGTGTGAGGGATTGGCTGGTGTTAATCTGATTGGGATTGTGTTGGTGCATCCTTACTTTTGGGGCACAGAGCCAGTTGGGGAAGAATCAACTGCCCCTGCAGCTGGACCTGGAGGAGAGTTAATTTCTGCTTTGTGGAGTTTTACTTACCCTTCGACTAGTGGAACTGATGACCCGTTTTTGAACCCGGGTAAGGATTCGAAGTTGGGGGAATTGGGTTGTGAGAAAGTGCTGGTTTGTGTTGCTGAGAAAGATGTGTTGAAAGATAGAGGATGGCATTATAGTGAGACACTGAAAAAGAGTGGGTGGAAAGGGGTTGTGGAGGTCATAGAAGCAATTGGGGAGAAGCATGTGTTCCATTTGGAAGATCCAACTTGTGACAATGCTGTGGCCCTGGAGAAAAAGATTGTTGCTTTCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

319

Amino Acids

34.4

Weight (kDa)

4.99

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 48
AciI CCGC 4 cut(s) 189, 192, 246, 494
AclWI GGATC 2 cut(s) 101, 893
AcuI CTGAAG 1 cut(s) 456
AcyI GRCGYC 1 cut(s) 120
AfiI CCNNNNNNNGG 4 cut(s) 116, 367, 635, 724
AgsI TTSAA 6 cut(s) 68, 260, 526, 715, 793, 952
AhlI ACTAGT 1 cut(s) 689
AjnI CCWGG 2 cut(s) 640, 924
AluBI AGCT 2 cut(s) 201, 635
AluI AGCT 2 cut(s) 201, 635
Alw21I GWGCWC 1 cut(s) 360
Alw26I GTCTC 3 cut(s) 310, 334, 812
AlwI GGATC 2 cut(s) 101, 893
AlwNI CAGNNNCTG 1 cut(s) 332
Ama87I CYCGRG 1 cut(s) 718
AoxI GGCC 2 cut(s) 312, 921
ApeKI GCWGC 3 cut(s) 371, 392, 632
ArsI GACNNNNNNTTYG 2 cut(s) 105, 137
AspS9I GGNCC 2 cut(s) 638, 922
AsuC2I CCSGG 2 cut(s) 719, 720
AsuHPI GGTGA 1 cut(s) 195
AsuII TTCGAA 1 cut(s) 731
AvaI CYCGRG 1 cut(s) 718
AvaII GGWCC 1 cut(s) 638
BaeGI GKGCMC 1 cut(s) 599
Bbv12I GWGCWC 1 cut(s) 360
BbvI GCAGC 3 cut(s) 358, 379, 644
BccI CCATC 4 cut(s) 50, 106, 416, 798
BceAI ACGGC 1 cut(s) 445
BciT130I CCWGG 2 cut(s) 642, 926
BcnI CCSGG 2 cut(s) 719, 720
BcoDI GTCTC 3 cut(s) 310, 334, 812
BcuI ACTAGT 1 cut(s) 689
BfaI CTAG 1 cut(s) 690
BfmI CTRYAG 2 cut(s) 340, 630
BisI GCNGC 5 cut(s) 192, 247, 372, 393, 633
BlsI GCNGC 5 cut(s) 193, 248, 373, 394, 634
Bme1390I CCNGG 4 cut(s) 642, 719, 720, 926
Bme18I GGWCC 1 cut(s) 638
BmeT110I CYCGRG 1 cut(s) 718
BmgT120I GGNCC 2 cut(s) 638, 922
BmrFI CCNGG 4 cut(s) 642, 719, 720, 926
BmsI GCATC 1 cut(s) 589
BpmI CTGGAG 2 cut(s) 663, 947
Bpu14I TTCGAA 1 cut(s) 731
BpuMI CCSGG 2 cut(s) 719, 720
BsaHI GRCGYC 1 cut(s) 120
BsaJI CCNNGG 3 cut(s) 238, 718, 924
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bsc4I CCNNNNNNNGG 4 cut(s) 116, 367, 635, 724
Bse118I RCCGGY 1 cut(s) 367
Bse1I ACTGG 2 cut(s) 121, 605
BseBI CCWGG 2 cut(s) 642, 926
BseDI CCNNGG 3 cut(s) 238, 718, 924
BseGI GGATG 3 cut(s) 177, 580, 809
BseLI CCNNNNNNNGG 4 cut(s) 116, 367, 635, 724
BseMII CTCAG 3 cut(s) 88, 300, 768
BseNI ACTGG 2 cut(s) 121, 605
BseRI GAGGAG 1 cut(s) 660
BseSI GKGCMC 1 cut(s) 599
BseXI GCAGC 3 cut(s) 358, 379, 644
BshFI GGCC 2 cut(s) 314, 923
BsiHKAI GWGCWC 1 cut(s) 360
BsiHKCI CYCGRG 1 cut(s) 718
BsiSI CCGG 2 cut(s) 368, 719
BslI CCNNNNNNNGG 4 cut(s) 116, 367, 635, 724
BsmAI GTCTC 3 cut(s) 310, 334, 812
BsnI GGCC 2 cut(s) 314, 923
BsoBI CYCGRG 1 cut(s) 718
Bsp119I TTCGAA 1 cut(s) 731
Bsp1286I GDGCHC 2 cut(s) 360, 599
Bsp143I GATC 3 cut(s) 106, 141, 898
Bsp19I CCATGG 1 cut(s) 238
BspACI CCGC 4 cut(s) 189, 192, 246, 494
BspANI GGCC 2 cut(s) 314, 923
BspCNI CTCAG 3 cut(s) 87, 301, 769
BspMAI CTGCAG 1 cut(s) 634
BspPI GGATC 2 cut(s) 101, 893
BspT104I TTCGAA 1 cut(s) 731
BsrFI RCCGGY 1 cut(s) 367
BsrI ACTGG 2 cut(s) 121, 605
BssAI RCCGGY 1 cut(s) 367
BssECI CCNNGG 3 cut(s) 238, 718, 924
BssMI GATC 3 cut(s) 106, 141, 898
BssNAI GTATAC 1 cut(s) 49
BssNI GRCGYC 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 238
Bst1107I GTATAC 1 cut(s) 49
Bst2UI CCWGG 2 cut(s) 642, 926
Bst4CI ACNGT 2 cut(s) 91, 452
Bst6I CTCTTC 1 cut(s) 228
BstACI GRCGYC 1 cut(s) 120
BstAPI GCANNNNNTGC 1 cut(s) 364
BstBI TTCGAA 1 cut(s) 731
BstC8I GCNNGC 2 cut(s) 348, 369
BstDEI CTNAG 4 cut(s) 74, 301, 309, 777
BstDSI CCRYGG 1 cut(s) 238
BstF5I GGATG 3 cut(s) 177, 580, 809
BstKTI GATC 3 cut(s) 109, 144, 901
BstMAI GTCTC 3 cut(s) 310, 334, 812
BstMBI GATC 3 cut(s) 106, 141, 898
BstMWI GCNNNNNNNGC 4 cut(s) 164, 252, 364, 632
BstNI CCWGG 2 cut(s) 642, 926
BstNSI RCATGY 1 cut(s) 884
BstSCI CCNGG 4 cut(s) 640, 717, 718, 924
BstSFI CTRYAG 2 cut(s) 340, 630
BstSLI GKGCMC 1 cut(s) 599
BstV1I GCAGC 3 cut(s) 358, 379, 644
BstX2I RGATCY 2 cut(s) 106, 898
BstXI CCANNNNNNTGG 1 cut(s) 422
BstYI RGATCY 2 cut(s) 106, 898
BstZ17I GTATAC 1 cut(s) 49
BsuRI GGCC 2 cut(s) 314, 923
BtgI CCRYGG 1 cut(s) 238
BtsCI GGATG 3 cut(s) 177, 580, 809
BtsIMutI CAGTG 1 cut(s) 821
Cac8I GCNNGC 2 cut(s) 348, 369
CaiI CAGNNNCTG 1 cut(s) 332
Cfr10I RCCGGY 1 cut(s) 367
Cfr13I GGNCC 2 cut(s) 638, 922
Cfr9I CCCGGG 1 cut(s) 718
CseI GACGC 1 cut(s) 109
CviAII CATG 4 cut(s) 239, 387, 517, 881
DdeI CTNAG 4 cut(s) 74, 301, 309, 777
DpnI GATC 3 cut(s) 108, 143, 900
DpnII GATC 3 cut(s) 106, 141, 898
Eam1104I CTCTTC 1 cut(s) 228
EarI CTCTTC 1 cut(s) 228
EciI GGCGGA 1 cut(s) 178
Eco130I CCWWGG 1 cut(s) 238
Eco47I GGWCC 1 cut(s) 638
Eco57I CTGAAG 1 cut(s) 456
Eco88I CYCGRG 1 cut(s) 718
EcoRII CCWGG 2 cut(s) 640, 924
EcoT14I CCWWGG 1 cut(s) 238
ErhI CCWWGG 1 cut(s) 238
FaeI CATG 4 cut(s) 242, 390, 520, 884
FalI AAGNNNNNCTT 2 cut(s) 253, 285
FatI CATG 4 cut(s) 238, 386, 516, 880
FauI CCCGC 1 cut(s) 487
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 5 cut(s) 192, 247, 372, 393, 633
FokI GGATG 3 cut(s) 164, 567, 816
Fsp4HI GCNGC 5 cut(s) 192, 247, 372, 393, 633
FspBI CTAG 1 cut(s) 690
GluI GCNGC 5 cut(s) 192, 247, 372, 393, 633
GsuI CTGGAG 2 cut(s) 663, 947
HaeIII GGCC 2 cut(s) 314, 923
HapII CCGG 2 cut(s) 368, 719
HgaI GACGC 1 cut(s) 109
Hin1I GRCGYC 1 cut(s) 120
Hin1II CATG 4 cut(s) 242, 390, 520, 884
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HinfI GANTC 4 cut(s) 72, 383, 617, 728
HpaII CCGG 2 cut(s) 368, 719
HphI GGTGA 1 cut(s) 195
Hpy166II GTNNAC 2 cut(s) 49, 337
Hpy188I TCNGA 6 cut(s) 36, 77, 310, 421, 436, 561
Hpy188III TCNNGA 1 cut(s) 949
Hpy8I GTNNAC 2 cut(s) 49, 337
HpyAV CCTTC 1 cut(s) 693
HpyCH4III ACNGT 2 cut(s) 91, 452
HpyCH4IV ACGT 1 cut(s) 135
HpyCH4V TGCA 6 cut(s) 167, 255, 326, 458, 580, 632
HpyF10VI GCNNNNNNNGC 4 cut(s) 164, 252, 364, 632
HpyF3I CTNAG 4 cut(s) 74, 301, 309, 777
HpySE526I ACGT 1 cut(s) 135
Hsp92I GRCGYC 1 cut(s) 120
Hsp92II CATG 4 cut(s) 242, 390, 520, 884
KroI GCCGGC 1 cut(s) 367
KroNI GCCGGC 1 cut(s) 369
Kzo9I GATC 3 cut(s) 106, 141, 898
Lsp1109I GCAGC 3 cut(s) 358, 379, 644
LweI GCATC 1 cut(s) 589
MaeI CTAG 1 cut(s) 690
MaeII ACGT 1 cut(s) 135
MaeIII GTNAC 1 cut(s) 908
MalI GATC 3 cut(s) 108, 143, 900
MboI GATC 3 cut(s) 106, 141, 898
MboII GAAGA 6 cut(s) 23, 215, 261, 449, 626, 908
MfeI CAATTG 1 cut(s) 867
MflI RGATCY 2 cut(s) 106, 898
MhlI GDGCHC 2 cut(s) 360, 599
MluCI AATT 6 cut(s) 14, 502, 654, 743, 867, 952
MlyI GAGTC 1 cut(s) 66
MmeI TCCRAC 1 cut(s) 926
MroNI GCCGGC 1 cut(s) 367
MseI TTAA 3 cut(s) 42, 555, 653
MslI CAYNNNNRTG 2 cut(s) 420, 813
MspA1I CMGCKG 1 cut(s) 635
MspI CCGG 2 cut(s) 368, 719
MspR9I CCNGG 4 cut(s) 642, 719, 720, 926
MunI CAATTG 1 cut(s) 867
MvaI CCWGG 2 cut(s) 642, 926
MwoI GCNNNNNNNGC 4 cut(s) 164, 252, 364, 632
NaeI GCCGGC 1 cut(s) 369
NciI CCSGG 2 cut(s) 719, 720
NcoI CCATGG 1 cut(s) 238
NdeII GATC 3 cut(s) 106, 141, 898
NgoMIV GCCGGC 1 cut(s) 367
NlaIII CATG 4 cut(s) 242, 390, 520, 884
NmuCI GTSAC 1 cut(s) 908
NspI RCATGY 1 cut(s) 884
NspV TTCGAA 1 cut(s) 731
PdiI GCCGGC 1 cut(s) 369
PfeI GAWTC 3 cut(s) 383, 617, 728
PkrI GCNGC 5 cut(s) 193, 248, 373, 394, 634
PleI GAGTC 1 cut(s) 66
PpsI GAGTC 1 cut(s) 66
Psp6I CCWGG 2 cut(s) 640, 924
PspGI CCWGG 2 cut(s) 640, 924
PspPI GGNCC 2 cut(s) 638, 922
PstI CTGCAG 1 cut(s) 634
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 2 cut(s) 106, 898
PvuII CAGCTG 1 cut(s) 635
RseI CAYNNNNRTG 2 cut(s) 420, 813
SaqAI TTAA 3 cut(s) 42, 555, 653
SatI GCNGC 5 cut(s) 192, 247, 372, 393, 633
Sau3AI GATC 3 cut(s) 106, 141, 898
Sau96I GGNCC 2 cut(s) 638, 922
SchI GAGTC 1 cut(s) 66
ScrFI CCNGG 4 cut(s) 642, 719, 720, 926
SduI GDGCHC 2 cut(s) 360, 599
SetI ASST 6 cut(s) 138, 203, 294, 637, 643, 858
SfaNI GCATC 1 cut(s) 589
SfcI CTRYAG 2 cut(s) 340, 630
SfuI TTCGAA 1 cut(s) 731
SinI GGWCC 1 cut(s) 638
SmaI CCCGGG 1 cut(s) 720
SmiMI CAYNNNNRTG 2 cut(s) 420, 813
SpeI ACTAGT 1 cut(s) 689
Sse9I AATT 6 cut(s) 14, 502, 654, 743, 867, 952
SsiI CCGC 4 cut(s) 189, 192, 246, 494
SspMI CTAG 1 cut(s) 690
StyD4I CCNGG 4 cut(s) 640, 717, 718, 924
StyI CCWWGG 1 cut(s) 238
TaaI ACNGT 2 cut(s) 91, 452
TaiI ACGT 1 cut(s) 138
TaqI TCGA 3 cut(s) 61, 686, 731
TasI AATT 6 cut(s) 14, 502, 654, 743, 867, 952
TauI GCSGC 2 cut(s) 194, 249
TfiI GAWTC 3 cut(s) 383, 617, 728
Tru1I TTAA 3 cut(s) 42, 555, 653
Tru9I TTAA 3 cut(s) 42, 555, 653
TscAI CASTG 1 cut(s) 828
TseFI GTSAC 1 cut(s) 908
TseI GCWGC 3 cut(s) 371, 392, 632
Tsp45I GTSAC 1 cut(s) 908
TspDTI ATGAA 2 cut(s) 255, 375
TspMI CCCGGG 1 cut(s) 718
TspRI CASTG 1 cut(s) 828
VpaK11BI GGWCC 1 cut(s) 638
XceI RCATGY 1 cut(s) 884
XmaI CCCGGG 1 cut(s) 718
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.