pycom10g07550

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000397
Physical Location & Seq
Reverse (-)
9092814 .. 9093925
1112 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g07550.1

Sequence Viewer

Length: 1053 bp
ATGAGTTTCATCACGGTCGGCAACGACCGTAATATGGTCTATAAAAAGCAATCAAGTCCCTCAGTTCCATTCAATAGACAGTTGCCGATTGTCTCCTATTCCTTGAATCCAAACATGACAAACGAAGTAGCCCATGATCTCTCTCCATTCATCAAAACATACAAAGATGGTCGAGTCGAGAGACTCTTAGGCACATCCACAGTCCCTCCATCAACGCCCCAAATCGGTGTCCAATCCAAAGACGTCGTGATTTCACAAGAACCACCCATATCCGCAAGGCTTTACCTCCCCAAATCCGCCACCAACTCAACCGACAAGCTCCCTCTTCTCGTTTACTTCCATGGAGGGGGGTTCTGTGTGGAAAGCGCCTTTTCTCCCACATATCACAACTACCTCAACTCCTTAGTATCCGAGGCCAATGTTGTTGCTGTCTCTGTTGAATATAGGCTTGCCCCAGAGCACCCTCTTCCGGCTGCTTACAATGATTCATGGGATGCTGTTAAATGGGTTGCTTCTCATTTTGATGGGAACGGCTTTGAAGATTGGCTAAATCGCTACGCAGATTGTCATCGCGTGTTCTTCGCTGGCGACAGCGCTGGGGCTAATATAGCACACAACCTGGCTTCGAAATTAGGGTCCGAGGGGTTGGATGGTGTTAAGCTTTTTGGGCTTGTATTGATACATCCATACTTTTGGGGGACAGAACCAGTTGGGGGAGAGTTAACTACCCCAGAAGCTACAAGAGAGTTTATGGCTGGTATGTGGCGTTTTGTGCACCCTTCGACTAGTGGATCCGATGACCCGCTTATAAACCCGTGTAAGGATCCGAAACTGGCGGAGTTGGGTTGTGAGAAAGTGTTGATTTTTGCTGCTGAGAAAGATGGGTTGAAAGATAGGGCATGGCATTATGGTGAGACACTGAGAAAGTGTGGGTGCTGTGCGGCTGTGGAGGTGATAGAATCAAAGGGGGAGGAGCATGTCTTCCATCTATTCAATCCCACTTGTGAGAATGCTGTGGCCATGAAGAAAAAGATTTCTTCTTTCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

351

Amino Acids

38.58

Weight (kDa)

5.95

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BD-FAE PF20434 94 - 216 7.8e-12 BD-FAE
COesterase PF00135 94 - 174 9e-09 Carboxylesterase family
Abhydrolase_3 PF07859 110 - 329 4.6e-54 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 809
AatII GACGTC 1 cut(s) 246
AccII CGCG 1 cut(s) 573
AciI CCGC 5 cut(s) 273, 297, 803, 836, 941
AclWI GGATC 4 cut(s) 786, 799, 818, 831
AcoI YGGCCR 1 cut(s) 1017
AcyI GRCGYC 1 cut(s) 243
AfeI AGCGCT 1 cut(s) 595
AfiI CCNNNNNNNGG 6 cut(s) 34, 224, 346, 469, 713, 820
AgsI TTSAA 7 cut(s) 73, 106, 440, 539, 889, 994, 1048
AhlI ACTAGT 1 cut(s) 785
AjnI CCWGG 1 cut(s) 618
AluBI AGCT 3 cut(s) 319, 661, 737
AluI AGCT 3 cut(s) 319, 661, 737
Alw21I GWGCWC 2 cut(s) 462, 777
Alw26I GTCTC 4 cut(s) 97, 175, 436, 908
Alw44I GTGCAC 1 cut(s) 773
AlwI GGATC 4 cut(s) 786, 799, 818, 831
Aor51HI AGCGCT 1 cut(s) 595
AoxI GGCC 2 cut(s) 414, 1017
ApaLI GTGCAC 1 cut(s) 773
ApeKI GCWGC 2 cut(s) 473, 869
ArsI GACNNNNNNTTYG 2 cut(s) 620, 652
AspLEI GCGC 2 cut(s) 368, 596
AspS9I GGNCC 1 cut(s) 636
AsuHPI GGTGA 2 cut(s) 923, 964
AsuII TTCGAA 1 cut(s) 626
AvaII GGWCC 1 cut(s) 636
BaeGI GKGCMC 1 cut(s) 777
BalI TGGCCA 1 cut(s) 1019
BamHI GGATCC 2 cut(s) 791, 823
BbsI GAAGAC 1 cut(s) 973
Bbv12I GWGCWC 2 cut(s) 462, 777
BbvI GCAGC 2 cut(s) 460, 856
BccI CCATC 6 cut(s) 161, 217, 518, 644, 875, 993
BceAI ACGGC 1 cut(s) 547
BciT130I CCWGG 1 cut(s) 620
BciVI GTATCC 1 cut(s) 418
BcoDI GTCTC 4 cut(s) 97, 175, 436, 908
BcuI ACTAGT 1 cut(s) 785
BfaI CTAG 1 cut(s) 786
BfoI RGCGCY 2 cut(s) 369, 597
BfuI GTATCC 1 cut(s) 418
BisI GCNGC 3 cut(s) 474, 870, 942
BlsI GCNGC 3 cut(s) 475, 871, 943
Bme1390I CCNGG 1 cut(s) 620
Bme18I GGWCC 1 cut(s) 636
BmgT120I GGNCC 1 cut(s) 636
BmiI GGNNCC 3 cut(s) 637, 793, 825
BmrFI CCNGG 1 cut(s) 620
BmsI GCATC 1 cut(s) 484
BpiI GAAGAC 1 cut(s) 973
Bpu14I TTCGAA 1 cut(s) 626
BsaBI GATNNNNATC 1 cut(s) 567
BsaHI GRCGYC 1 cut(s) 243
BsaJI CCNNGG 3 cut(s) 340, 411, 639
BsaXI ACNNNNNCTCC 4 cut(s) 190, 220, 383, 413
Bsc4I CCNNNNNNNGG 6 cut(s) 34, 224, 346, 469, 713, 820
Bse1I ACTGG 2 cut(s) 707, 837
Bse8I GATNNNNATC 1 cut(s) 567
BseBI CCWGG 1 cut(s) 620
BseDI CCNNGG 3 cut(s) 340, 411, 639
BseGI GGATG 4 cut(s) 194, 499, 655, 682
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 6 cut(s) 34, 224, 346, 469, 713, 820
BseMII CTCAG 3 cut(s) 75, 864, 911
BseNI ACTGG 2 cut(s) 707, 837
BseRI GAGGAG 1 cut(s) 986
BseSI GKGCMC 1 cut(s) 777
BseXI GCAGC 2 cut(s) 460, 856
BseYI CCCAGC 1 cut(s) 596
Bsh1236I CGCG 1 cut(s) 573
Bsh1285I CGRYCG 2 cut(s) 18, 28
BshFI GGCC 2 cut(s) 416, 1019
BsiEI CGRYCG 2 cut(s) 18, 28
BsiHKAI GWGCWC 2 cut(s) 462, 777
BsiSI CCGG 1 cut(s) 470
BslFI GGGAC 3 cut(s) 42, 188, 712
BslI CCNNNNNNNGG 6 cut(s) 34, 224, 346, 469, 713, 820
BsmAI GTCTC 4 cut(s) 97, 175, 436, 908
BsmFI GGGAC 3 cut(s) 42, 188, 712
BsmI GAATGC 1 cut(s) 1015
BsnI GGCC 2 cut(s) 416, 1019
Bsp119I TTCGAA 1 cut(s) 626
Bsp1286I GDGCHC 2 cut(s) 462, 777
Bsp143I GATC 3 cut(s) 136, 791, 823
Bsp19I CCATGG 1 cut(s) 340
BspACI CCGC 5 cut(s) 273, 297, 803, 836, 941
BspANI GGCC 2 cut(s) 416, 1019
BspCNI CTCAG 3 cut(s) 74, 865, 912
BspFNI CGCG 1 cut(s) 573
BspLI GGNNCC 3 cut(s) 637, 793, 825
BspPI GGATC 4 cut(s) 786, 799, 818, 831
BspT104I TTCGAA 1 cut(s) 626
BsrI ACTGG 2 cut(s) 707, 837
BssECI CCNNGG 3 cut(s) 340, 411, 639
BssMI GATC 3 cut(s) 136, 791, 823
BssNI GRCGYC 1 cut(s) 243
BssT1I CCWWGG 1 cut(s) 340
Bst2UI CCWGG 1 cut(s) 620
Bst4CI ACNGT 4 cut(s) 16, 29, 81, 202
Bst6I CTCTTC 2 cut(s) 330, 471
BstACI GRCGYC 1 cut(s) 243
BstBI TTCGAA 1 cut(s) 626
BstC8I GCNNGC 2 cut(s) 450, 586
BstDEI CTNAG 5 cut(s) 61, 187, 403, 873, 920
BstDSI CCRYGG 1 cut(s) 340
BstF5I GGATG 4 cut(s) 194, 499, 655, 682
BstFNI CGCG 1 cut(s) 573
BstH2I RGCGCY 2 cut(s) 369, 597
BstHHI GCGC 2 cut(s) 368, 596
BstKTI GATC 3 cut(s) 139, 794, 826
BstMAI GTCTC 4 cut(s) 97, 175, 436, 908
BstMBI GATC 3 cut(s) 136, 791, 823
BstMCI CGRYCG 2 cut(s) 18, 28
BstMWI GCNNNNNNNGC 3 cut(s) 608, 667, 772
BstNI CCWGG 1 cut(s) 620
BstNSI RCATGY 1 cut(s) 980
BstSCI CCNGG 1 cut(s) 618
BstSLI GKGCMC 1 cut(s) 777
BstUI CGCG 1 cut(s) 573
BstV1I GCAGC 2 cut(s) 460, 856
BstV2I GAAGAC 1 cut(s) 973
BstX2I RGATCY 2 cut(s) 791, 823
BstXI CCANNNNNNTGG 1 cut(s) 693
BstYI RGATCY 2 cut(s) 791, 823
BsuI GTATCC 1 cut(s) 418
BsuRI GGCC 2 cut(s) 416, 1019
BtgI CCRYGG 1 cut(s) 340
BtgZI GCGATG 1 cut(s) 554
BtsCI GGATG 4 cut(s) 194, 499, 655, 682
BtsIMutI CAGTG 1 cut(s) 917
Cac8I GCNNGC 2 cut(s) 450, 586
CfoI GCGC 2 cut(s) 368, 596
Cfr13I GGNCC 1 cut(s) 636
CviAII CATG 7 cut(s) 115, 134, 341, 489, 900, 977, 1021
DdeI CTNAG 5 cut(s) 61, 187, 403, 873, 920
DpnI GATC 3 cut(s) 138, 793, 825
DpnII GATC 3 cut(s) 136, 791, 823
EaeI YGGCCR 1 cut(s) 1017
Eam1104I CTCTTC 2 cut(s) 330, 471
EarI CTCTTC 2 cut(s) 330, 471
EciI GGCGGA 2 cut(s) 286, 851
Eco130I CCWWGG 1 cut(s) 340
Eco47I GGWCC 1 cut(s) 636
Eco47III AGCGCT 1 cut(s) 595
EcoRII CCWGG 1 cut(s) 618
EcoT14I CCWWGG 1 cut(s) 340
ErhI CCWWGG 1 cut(s) 340
FaeI CATG 7 cut(s) 118, 137, 344, 492, 903, 980, 1024
FaqI GGGAC 3 cut(s) 42, 188, 712
FatI CATG 7 cut(s) 114, 133, 340, 488, 899, 976, 1020
FauI CCCGC 1 cut(s) 810
Fnu4HI GCNGC 3 cut(s) 474, 870, 942
FokI GGATG 4 cut(s) 181, 506, 662, 669
Fsp4HI GCNGC 3 cut(s) 474, 870, 942
FspBI CTAG 1 cut(s) 786
GlaI GCGC 2 cut(s) 367, 595
GluI GCNGC 3 cut(s) 474, 870, 942
GsaI CCCAGC 1 cut(s) 600
HaeII RGCGCY 2 cut(s) 369, 597
HaeIII GGCC 2 cut(s) 416, 1019
HapII CCGG 1 cut(s) 470
HhaI GCGC 2 cut(s) 368, 596
Hin1I GRCGYC 1 cut(s) 243
Hin1II CATG 7 cut(s) 118, 137, 344, 492, 903, 980, 1024
Hin6I GCGC 2 cut(s) 366, 594
HinP1I GCGC 2 cut(s) 366, 594
HincII GTYRAC 1 cut(s) 723
HindII GTYRAC 1 cut(s) 723
HindIII AAGCTT 1 cut(s) 659
HinfI GANTC 5 cut(s) 106, 174, 183, 485, 959
HpaI GTTAAC 1 cut(s) 723
HpaII CCGG 1 cut(s) 470
HphI GGTGA 2 cut(s) 923, 964
Hpy166II GTNNAC 3 cut(s) 334, 723, 775
Hpy188I TCNGA 4 cut(s) 412, 640, 796, 828
Hpy188III TCNNGA 3 cut(s) 178, 247, 1045
Hpy8I GTNNAC 3 cut(s) 334, 723, 775
Hpy99I CGWCG 1 cut(s) 248
HpyAV CCTTC 1 cut(s) 789
HpyCH4III ACNGT 4 cut(s) 16, 29, 81, 202
HpyCH4IV ACGT 1 cut(s) 243
HpyCH4V TGCA 1 cut(s) 775
HpyF10VI GCNNNNNNNGC 3 cut(s) 608, 667, 772
HpyF3I CTNAG 5 cut(s) 61, 187, 403, 873, 920
HpySE526I ACGT 1 cut(s) 243
Hsp92I GRCGYC 1 cut(s) 243
Hsp92II CATG 7 cut(s) 118, 137, 344, 492, 903, 980, 1024
HspAI GCGC 2 cut(s) 366, 594
KspAI GTTAAC 1 cut(s) 723
Kzo9I GATC 3 cut(s) 136, 791, 823
LmnI GCTCC 2 cut(s) 324, 973
Lsp1109I GCAGC 2 cut(s) 460, 856
LweI GCATC 1 cut(s) 484
MaeI CTAG 1 cut(s) 786
MaeII ACGT 1 cut(s) 243
MalI GATC 3 cut(s) 138, 793, 825
MboI GATC 3 cut(s) 136, 791, 823
MboII GAAGA 7 cut(s) 317, 458, 551, 571, 973, 1029, 1036
MflI RGATCY 2 cut(s) 791, 823
MhlI GDGCHC 2 cut(s) 462, 777
MlsI TGGCCA 1 cut(s) 1019
MluCI AATT 2 cut(s) 629, 1048
MluNI TGGCCA 1 cut(s) 1019
MlyI GAGTC 2 cut(s) 177, 183
MmeI TCCRAC 1 cut(s) 627
Mox20I TGGCCA 1 cut(s) 1019
MscI TGGCCA 1 cut(s) 1019
MseI TTAA 3 cut(s) 501, 657, 722
MslI CAYNNNNRTG 2 cut(s) 522, 909
Msp20I TGGCCA 1 cut(s) 1019
MspI CCGG 1 cut(s) 470
MspR9I CCNGG 1 cut(s) 620
Mva1269I GAATGC 1 cut(s) 1015
MvaI CCWGG 1 cut(s) 620
MvnI CGCG 1 cut(s) 573
MwoI GCNNNNNNNGC 3 cut(s) 608, 667, 772
NcoI CCATGG 1 cut(s) 340
NdeII GATC 3 cut(s) 136, 791, 823
NlaIII CATG 7 cut(s) 118, 137, 344, 492, 903, 980, 1024
NlaIV GGNNCC 3 cut(s) 637, 793, 825
NspI RCATGY 1 cut(s) 980
NspV TTCGAA 1 cut(s) 626
PctI GAATGC 1 cut(s) 1015
PfeI GAWTC 3 cut(s) 106, 485, 959
PkrI GCNGC 3 cut(s) 475, 871, 943
PleI GAGTC 2 cut(s) 177, 182
PpsI GAGTC 2 cut(s) 177, 182
PsiI TTATAA 1 cut(s) 809
Psp6I CCWGG 1 cut(s) 618
PspFI CCCAGC 1 cut(s) 596
PspGI CCWGG 1 cut(s) 618
PspN4I GGNNCC 3 cut(s) 637, 793, 825
PspPI GGNCC 1 cut(s) 636
PsuI RGATCY 2 cut(s) 791, 823
RseI CAYNNNNRTG 2 cut(s) 522, 909
SaqAI TTAA 3 cut(s) 501, 657, 722
SatI GCNGC 3 cut(s) 474, 870, 942
Sau3AI GATC 3 cut(s) 136, 791, 823
Sau96I GGNCC 1 cut(s) 636
SchI GAGTC 2 cut(s) 177, 183
ScrFI CCNGG 1 cut(s) 620
SduI GDGCHC 2 cut(s) 462, 777
SetI ASST 8 cut(s) 246, 288, 321, 396, 621, 663, 739, 954
SfaNI GCATC 1 cut(s) 484
SfuI TTCGAA 1 cut(s) 626
SinI GGWCC 1 cut(s) 636
SmiMI CAYNNNNRTG 2 cut(s) 522, 909
SpeI ACTAGT 1 cut(s) 785
Sse9I AATT 2 cut(s) 629, 1048
SsiI CCGC 5 cut(s) 273, 297, 803, 836, 941
SspMI CTAG 1 cut(s) 786
StyD4I CCNGG 1 cut(s) 618
StyI CCWWGG 1 cut(s) 340
TaaI ACNGT 4 cut(s) 16, 29, 81, 202
TaiI ACGT 1 cut(s) 246
TaqI TCGA 4 cut(s) 172, 177, 626, 782
TasI AATT 2 cut(s) 629, 1048
TauI GCSGC 1 cut(s) 944
TfiI GAWTC 3 cut(s) 106, 485, 959
Tru1I TTAA 3 cut(s) 501, 657, 722
Tru9I TTAA 3 cut(s) 501, 657, 722
TscAI CASTG 1 cut(s) 924
TseI GCWGC 2 cut(s) 473, 869
TspDTI ATGAA 3 cut(s) 139, 477, 1037
TspRI CASTG 1 cut(s) 924
VneI GTGCAC 1 cut(s) 773
VpaK11BI GGWCC 1 cut(s) 636
XceI RCATGY 1 cut(s) 980
XspI CTAG 1 cut(s) 786
ZraI GACGTC 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.