Prupe.I000800_v2.0.a1

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
scaffold_139
OG0000397
Physical Location & Seq
Reverse (-)
2929 .. 3874
946 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.I000800.1

Sequence Viewer

Length: 795 bp
ATGAGCAACGAAGAATTAGCCTATGATTTCTCTCCGATGATTAAAGTATACAAAGATGGTCGAGTTGAAAGACTCAGAGGCACAGACACAGTTCCTCCATCAACAGATCCCAAAACTGGCGTCCAATCAAAAGACGTTGTGATCTCACAAGAACCAGCCATATCTGCAAGGCTTTACATCCCAAAATCCACCACCACAAGCGCACCCCAAACCAAACTTCCTCTTCTCATTTACTTTCATGGAGGCGGCTTCTGCATTCGAAGTTCATCTTCTCGCACACATCACAACTACCTCAACGCCTTAGTCTCTGAGGCCAATGTTGTTGCCGTCTCTGTTGACTATAGGCTTGTCCCAGAGCACCCTCTGCCAGCTGCTTACGATGATTCATGGCTGCTCTCAAATGGTGCTGGGGCTAATATAACGCACAACATGGCTGTGAATTGGGAGCCAGTTGGGGATGAGTTAACTACTCCGGCAGCTGCAAGAGATTATATGGCTGGTGTGTGGCGTTTTGCTTGCCCTTCGACTAGTGGATCCGACGACCCGCTTATAAACCCGGCTAAGGATCAGAAATTGGGTAAATTGGGTTGTGAGAAAGTGCTGGTTTGTGTTGCTGAGAAAGATGTGTTGAAAGATAGAGGATGGCATTATAGTGAGACACTGAAAAGGAGCGGGTGGAATGGGGATGTGGAGGTCATAGAAGCAGAGGGGGAGGGGCATGTGTTCCATTGGATCAATCCCACTTGCGACAATGCTGTGGCCATGGAGAAAAAGATTGTTGCTTTCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

265

Amino Acids

28.96

Weight (kDa)

5.62

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 551
AccBSI CCGCTC 1 cut(s) 672
AccI GTMKAC 1 cut(s) 48
AciI CCGC 3 cut(s) 246, 545, 672
AclWI GGATC 5 cut(s) 101, 528, 541, 573, 740
AcoI YGGCCR 1 cut(s) 759
AcyI GRCGYC 1 cut(s) 120
AfiI CCNNNNNNNGG 2 cut(s) 116, 562
AgsI TTSAA 3 cut(s) 68, 631, 790
AhlI ACTAGT 1 cut(s) 527
AjuI GAANNNNNNNTTGG 2 cut(s) 201, 233
AluBI AGCT 2 cut(s) 371, 479
AluI AGCT 2 cut(s) 371, 479
Alw21I GWGCWC 1 cut(s) 360
Alw26I GTCTC 3 cut(s) 310, 334, 650
AlwI GGATC 5 cut(s) 101, 528, 541, 573, 740
AoxI GGCC 2 cut(s) 312, 759
ApeKI GCWGC 4 cut(s) 371, 391, 476, 479
ArsI GACNNNNNNTTYG 2 cut(s) 105, 137
AspLEI GCGC 1 cut(s) 203
AsuC2I CCSGG 1 cut(s) 557
AsuII TTCGAA 1 cut(s) 259
BalI TGGCCA 1 cut(s) 761
BamHI GGATCC 1 cut(s) 533
Bbv12I GWGCWC 1 cut(s) 360
BbvI GCAGC 4 cut(s) 358, 378, 466, 488
BccI CCATC 3 cut(s) 50, 106, 636
BceAI ACGGC 1 cut(s) 311
BcnI CCSGG 1 cut(s) 557
BcoDI GTCTC 3 cut(s) 310, 334, 650
BcuI ACTAGT 1 cut(s) 527
BfaI CTAG 1 cut(s) 528
BfmI CTRYAG 1 cut(s) 340
BisI GCNGC 5 cut(s) 247, 372, 392, 477, 480
BlsI GCNGC 5 cut(s) 248, 373, 393, 478, 481
Bme1390I CCNGG 1 cut(s) 557
BmiI GGNNCC 2 cut(s) 447, 535
BmrFI CCNGG 1 cut(s) 557
Bpu10I CCTNAGC 1 cut(s) 561
Bpu14I TTCGAA 1 cut(s) 259
BpuMI CCSGG 1 cut(s) 557
BsaHI GRCGYC 1 cut(s) 120
BsaJI CCNNGG 1 cut(s) 762
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bsc4I CCNNNNNNNGG 2 cut(s) 116, 562
Bse1I ACTGG 2 cut(s) 121, 449
BseDI CCNNGG 1 cut(s) 762
BseGI GGATG 4 cut(s) 177, 463, 647, 691
BseLI CCNNNNNNNGG 2 cut(s) 116, 562
BseMII CTCAG 3 cut(s) 88, 300, 606
BseNI ACTGG 2 cut(s) 121, 449
BseXI GCAGC 4 cut(s) 358, 378, 466, 488
BseYI CCCAGC 1 cut(s) 407
BshFI GGCC 2 cut(s) 314, 761
BsiHKAI GWGCWC 1 cut(s) 360
BsiSI CCGG 2 cut(s) 473, 557
BslFI GGGAC 1 cut(s) 335
BslI CCNNNNNNNGG 2 cut(s) 116, 562
BsmAI GTCTC 3 cut(s) 310, 334, 650
BsmBI CGTCTC 1 cut(s) 334
BsmFI GGGAC 1 cut(s) 335
BsmI GAATGC 1 cut(s) 255
BsnI GGCC 2 cut(s) 314, 761
Bsp119I TTCGAA 1 cut(s) 259
Bsp1286I GDGCHC 1 cut(s) 360
Bsp143I GATC 5 cut(s) 106, 141, 533, 565, 732
Bsp19I CCATGG 1 cut(s) 762
BspACI CCGC 3 cut(s) 246, 545, 672
BspANI GGCC 2 cut(s) 314, 761
BspCNI CTCAG 3 cut(s) 87, 301, 607
BspLI GGNNCC 2 cut(s) 447, 535
BspPI GGATC 5 cut(s) 101, 528, 541, 573, 740
BspT104I TTCGAA 1 cut(s) 259
BsrBI CCGCTC 1 cut(s) 672
BsrI ACTGG 2 cut(s) 121, 449
BssECI CCNNGG 1 cut(s) 762
BssMI GATC 5 cut(s) 106, 141, 533, 565, 732
BssNAI GTATAC 1 cut(s) 49
BssNI GRCGYC 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 762
Bst1107I GTATAC 1 cut(s) 49
Bst4CI ACNGT 1 cut(s) 91
Bst6I CTCTTC 1 cut(s) 228
BstACI GRCGYC 1 cut(s) 120
BstAPI GCANNNNNTGC 1 cut(s) 364
BstBI TTCGAA 1 cut(s) 259
BstC8I GCNNGC 2 cut(s) 369, 517
BstDEI CTNAG 5 cut(s) 74, 301, 309, 561, 615
BstDSI CCRYGG 1 cut(s) 762
BstF5I GGATG 4 cut(s) 177, 463, 647, 691
BstHHI GCGC 1 cut(s) 203
BstKTI GATC 5 cut(s) 109, 144, 536, 568, 735
BstMAI GTCTC 3 cut(s) 310, 334, 650
BstMBI GATC 5 cut(s) 106, 141, 533, 565, 732
BstMWI GCNNNNNNNGC 3 cut(s) 164, 252, 364
BstNSI RCATGY 1 cut(s) 722
BstSCI CCNGG 1 cut(s) 555
BstSFI CTRYAG 1 cut(s) 340
BstV1I GCAGC 4 cut(s) 358, 378, 466, 488
BstX2I RGATCY 2 cut(s) 106, 533
BstYI RGATCY 2 cut(s) 106, 533
BstZ17I GTATAC 1 cut(s) 49
BsuRI GGCC 2 cut(s) 314, 761
BtgI CCRYGG 1 cut(s) 762
BtsCI GGATG 4 cut(s) 177, 463, 647, 691
BtsIMutI CAGTG 1 cut(s) 659
Cac8I GCNNGC 2 cut(s) 369, 517
CfoI GCGC 1 cut(s) 203
CseI GACGC 1 cut(s) 109
CviAII CATG 5 cut(s) 239, 387, 430, 719, 763
DdeI CTNAG 5 cut(s) 74, 301, 309, 561, 615
DpnI GATC 5 cut(s) 108, 143, 535, 567, 734
DpnII GATC 5 cut(s) 106, 141, 533, 565, 732
EaeI YGGCCR 1 cut(s) 759
Eam1104I CTCTTC 1 cut(s) 228
EarI CTCTTC 1 cut(s) 228
Eco130I CCWWGG 1 cut(s) 762
EcoT14I CCWWGG 1 cut(s) 762
ErhI CCWWGG 1 cut(s) 762
Esp3I CGTCTC 1 cut(s) 334
FaeI CATG 5 cut(s) 242, 390, 433, 722, 766
FalI AAGNNNNNCTT 2 cut(s) 253, 285
FaqI GGGAC 1 cut(s) 335
FatI CATG 5 cut(s) 238, 386, 429, 718, 762
FauI CCCGC 2 cut(s) 552, 665
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 5 cut(s) 247, 372, 392, 477, 480
FokI GGATG 4 cut(s) 164, 470, 654, 698
Fsp4HI GCNGC 5 cut(s) 247, 372, 392, 477, 480
FspBI CTAG 1 cut(s) 528
GlaI GCGC 1 cut(s) 202
GluI GCNGC 5 cut(s) 247, 372, 392, 477, 480
GsaI CCCAGC 1 cut(s) 411
HaeIII GGCC 2 cut(s) 314, 761
HapII CCGG 2 cut(s) 473, 557
HgaI GACGC 1 cut(s) 109
HhaI GCGC 1 cut(s) 203
Hin1I GRCGYC 1 cut(s) 120
Hin1II CATG 5 cut(s) 242, 390, 433, 722, 766
Hin6I GCGC 1 cut(s) 201
HinP1I GCGC 1 cut(s) 201
HincII GTYRAC 2 cut(s) 337, 465
HindII GTYRAC 2 cut(s) 337, 465
HinfI GANTC 2 cut(s) 72, 383
HpaI GTTAAC 1 cut(s) 465
HpaII CCGG 2 cut(s) 473, 557
Hpy166II GTNNAC 3 cut(s) 49, 337, 465
Hpy188I TCNGA 5 cut(s) 36, 77, 310, 538, 570
Hpy188III TCNNGA 1 cut(s) 787
Hpy8I GTNNAC 3 cut(s) 49, 337, 465
Hpy99I CGWCG 1 cut(s) 542
HpyAV CCTTC 1 cut(s) 531
HpyCH4III ACNGT 1 cut(s) 91
HpyCH4IV ACGT 1 cut(s) 135
HpyCH4V TGCA 3 cut(s) 167, 255, 482
HpyF10VI GCNNNNNNNGC 3 cut(s) 164, 252, 364
HpyF3I CTNAG 5 cut(s) 74, 301, 309, 561, 615
HpySE526I ACGT 1 cut(s) 135
Hsp92I GRCGYC 1 cut(s) 120
Hsp92II CATG 5 cut(s) 242, 390, 433, 722, 766
HspAI GCGC 1 cut(s) 201
KspAI GTTAAC 1 cut(s) 465
Kzo9I GATC 5 cut(s) 106, 141, 533, 565, 732
LmnI GCTCC 2 cut(s) 445, 669
Lsp1109I GCAGC 4 cut(s) 358, 378, 466, 488
MaeI CTAG 1 cut(s) 528
MaeII ACGT 1 cut(s) 135
MalI GATC 5 cut(s) 108, 143, 535, 567, 734
MbiI CCGCTC 1 cut(s) 672
MboI GATC 5 cut(s) 106, 141, 533, 565, 732
MboII GAAGA 3 cut(s) 23, 215, 261
MflI RGATCY 2 cut(s) 106, 533
MhlI GDGCHC 1 cut(s) 360
MlsI TGGCCA 1 cut(s) 761
MluCI AATT 5 cut(s) 14, 439, 572, 581, 790
MluNI TGGCCA 1 cut(s) 761
MlyI GAGTC 1 cut(s) 66
MmeI TCCRAC 1 cut(s) 561
Mox20I TGGCCA 1 cut(s) 761
MscI TGGCCA 1 cut(s) 761
MseI TTAA 2 cut(s) 42, 464
MslI CAYNNNNRTG 2 cut(s) 434, 651
Msp20I TGGCCA 1 cut(s) 761
MspA1I CMGCKG 2 cut(s) 371, 479
MspI CCGG 2 cut(s) 473, 557
MspR9I CCNGG 1 cut(s) 557
Mva1269I GAATGC 1 cut(s) 255
MwoI GCNNNNNNNGC 3 cut(s) 164, 252, 364
NciI CCSGG 1 cut(s) 557
NcoI CCATGG 1 cut(s) 762
NdeII GATC 5 cut(s) 106, 141, 533, 565, 732
NlaIII CATG 5 cut(s) 242, 390, 433, 722, 766
NlaIV GGNNCC 2 cut(s) 447, 535
NspI RCATGY 1 cut(s) 722
NspV TTCGAA 1 cut(s) 259
PctI GAATGC 1 cut(s) 255
PfeI GAWTC 1 cut(s) 383
PkrI GCNGC 5 cut(s) 248, 373, 393, 478, 481
PleI GAGTC 1 cut(s) 66
PpsI GAGTC 1 cut(s) 66
PsiI TTATAA 1 cut(s) 551
PspFI CCCAGC 1 cut(s) 407
PspN4I GGNNCC 2 cut(s) 447, 535
PsuI RGATCY 2 cut(s) 106, 533
PvuII CAGCTG 2 cut(s) 371, 479
RseI CAYNNNNRTG 2 cut(s) 434, 651
SaqAI TTAA 2 cut(s) 42, 464
SatI GCNGC 5 cut(s) 247, 372, 392, 477, 480
Sau3AI GATC 5 cut(s) 106, 141, 533, 565, 732
SchI GAGTC 1 cut(s) 66
ScrFI CCNGG 1 cut(s) 557
SduI GDGCHC 1 cut(s) 360
SetI ASST 5 cut(s) 138, 294, 373, 481, 696
SfcI CTRYAG 1 cut(s) 340
SfuI TTCGAA 1 cut(s) 259
SmiMI CAYNNNNRTG 2 cut(s) 434, 651
SpeI ACTAGT 1 cut(s) 527
Sse9I AATT 5 cut(s) 14, 439, 572, 581, 790
SsiI CCGC 3 cut(s) 246, 545, 672
SspMI CTAG 1 cut(s) 528
StyD4I CCNGG 1 cut(s) 555
StyI CCWWGG 1 cut(s) 762
TaaI ACNGT 1 cut(s) 91
TaiI ACGT 1 cut(s) 138
TaqI TCGA 3 cut(s) 61, 259, 524
TasI AATT 5 cut(s) 14, 439, 572, 581, 790
TauI GCSGC 1 cut(s) 249
TfiI GAWTC 1 cut(s) 383
Tru1I TTAA 2 cut(s) 42, 464
Tru9I TTAA 2 cut(s) 42, 464
TscAI CASTG 1 cut(s) 666
TseI GCWGC 4 cut(s) 371, 391, 476, 479
TspDTI ATGAA 3 cut(s) 227, 255, 375
TspRI CASTG 1 cut(s) 666
XceI RCATGY 1 cut(s) 722
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.