Prupe.8G122000_v2.0.a1

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000397
Physical Location & Seq
Reverse (-)
14773504 .. 14774464
961 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G122000.1

Sequence Viewer

Length: 951 bp
ATGAGCAACGAAGAAATAGCCCATGATTTCTTTAACGTCATTAAAGTCTACAAAGATGGTCGAGTTGAGAGACTCCTAGGCACATCTACAGTTCCTCCATCAACACATCCAGAGAATGGCGTCCAATCAAAAGACGTTGTGATCTCACAAGAACCAGCCATATCTGCAAGGCTTTACATCCCAAAATCCGCCGCCACAAGCTCACCCCAAACCAAACTCCCTCTTCTCGTTTACTTTCACGGAGGCGGCTTCTGCATTGAAAGCTCATCTTCTCCCACATATCACAACTACCTCAACACCTTAGTCTCTGAGGCCAATGTTGTTGCCGTCTCTGTTGACTACAGGCTTGCCCCGGAAAACCCTTTGCCAGCGGCTTACGATGATTCATGGGCTGCTCTCAAATGGGTTGCTTCCCATTTTGATGGAAACGGCTCTGAAGATTGGCTAAACAGATTTGCAGATTTACGCGGTGTGTTTTTCGGCGGTGACAGTGCTGGAGCTAATATAGCACACAACATGGCTTTGAAATTGGGGTGTGAGGGATTGGTTGGTGTTAAGCTTATTGGGATTGTATTGATACATCCTTACTTTTGGGGCACAGAGCCAGTTGGGGAAGAGTTAACTATCCCTGCAGCTAAAAGAGAGTATATAGCTGCATTGTGGCGTTTCACTTGCCCTTTGAGTATCGGATCCGATGACCCGCTTTTCAACCCGGGAAAGGATCCGAAGTTGGGGGAATTGGGTTGTGAGAAAGTACTGGTTTGTGTTGCTGAGAAAGATGTTTTCAAAGATAGGGGGTGGCATTATAGTGAGGTACTGAAGAAGAGTGGATGGAAAGGGGTTGTGGAGGTCATAGAAGCAAAGGGGGAGGAACATGTGTTCCATTTGCGGAATCCCAGTTGTGAGAATGCTGTGGCCATGAAGAAAAAGATTGCTTCCTTCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

317

Amino Acids

34.62

Weight (kDa)

5.82

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 116
AccI GTMKAC 1 cut(s) 48
AccII CGCG 1 cut(s) 468
AciI CCGC 8 cut(s) 189, 192, 246, 371, 468, 483, 701, 889
AclWI GGATC 4 cut(s) 684, 697, 716, 729
AcoI YGGCCR 1 cut(s) 915
AcuI CTGAAG 2 cut(s) 456, 839
AcyI GRCGYC 1 cut(s) 120
AfaI GTAC 2 cut(s) 756, 816
AfiI CCNNNNNNNGG 3 cut(s) 116, 718, 731
AflIII ACRYGT 1 cut(s) 874
AgsI TTSAA 5 cut(s) 260, 526, 709, 787, 946
AloI GAACNNNNNNTCC 4 cut(s) 863, 864, 895, 896
AluBI AGCT 6 cut(s) 201, 264, 500, 559, 635, 653
AluI AGCT 6 cut(s) 201, 264, 500, 559, 635, 653
Alw26I GTCTC 3 cut(s) 64, 310, 334
AlwI GGATC 4 cut(s) 684, 697, 716, 729
Ama87I CYCGRG 1 cut(s) 712
AoxI GGCC 2 cut(s) 312, 915
ApeKI GCWGC 3 cut(s) 392, 632, 653
AspA2I CCTAGG 1 cut(s) 76
AsuC2I CCSGG 3 cut(s) 353, 713, 714
AsuHPI GGTGA 2 cut(s) 195, 497
AvaI CYCGRG 1 cut(s) 712
AvrII CCTAGG 1 cut(s) 76
BaeGI GKGCMC 1 cut(s) 599
BalI TGGCCA 1 cut(s) 917
BamHI GGATCC 2 cut(s) 689, 721
BbvI GCAGC 3 cut(s) 379, 640, 644
BccI CCATC 4 cut(s) 50, 106, 416, 825
BceAI ACGGC 2 cut(s) 311, 445
BcnI CCSGG 3 cut(s) 353, 713, 714
BcoDI GTCTC 3 cut(s) 64, 310, 334
BfaI CTAG 1 cut(s) 77
BfmI CTRYAG 3 cut(s) 87, 340, 630
BisI GCNGC 6 cut(s) 192, 247, 372, 393, 633, 654
BlnI CCTAGG 1 cut(s) 76
BlsI GCNGC 6 cut(s) 193, 248, 373, 394, 634, 655
BmcAI AGTACT 1 cut(s) 756
Bme1390I CCNGG 3 cut(s) 353, 713, 714
BmeT110I CYCGRG 1 cut(s) 712
BmiI GGNNCC 2 cut(s) 691, 723
BmrFI CCNGG 3 cut(s) 353, 713, 714
BmrI ACTGGG 1 cut(s) 891
BmuI ACTGGG 1 cut(s) 891
BpmI CTGGAG 1 cut(s) 516
BpuMI CCSGG 3 cut(s) 353, 713, 714
BsaHI GRCGYC 1 cut(s) 120
BsaJI CCNNGG 3 cut(s) 76, 351, 712
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bsc4I CCNNNNNNNGG 3 cut(s) 116, 718, 731
Bse1I ACTGG 3 cut(s) 605, 762, 897
BseDI CCNNGG 3 cut(s) 76, 351, 712
BseGI GGATG 4 cut(s) 106, 177, 580, 836
BseLI CCNNNNNNNGG 3 cut(s) 116, 718, 731
BseMII CTCAG 2 cut(s) 300, 762
BseNI ACTGG 3 cut(s) 605, 762, 897
BseSI GKGCMC 1 cut(s) 599
BseXI GCAGC 3 cut(s) 379, 640, 644
Bsh1236I CGCG 1 cut(s) 468
BshFI GGCC 2 cut(s) 314, 917
BsiHKCI CYCGRG 1 cut(s) 712
BsiSI CCGG 2 cut(s) 353, 713
BslI CCNNNNNNNGG 3 cut(s) 116, 718, 731
BsmAI GTCTC 3 cut(s) 64, 310, 334
BsmBI CGTCTC 1 cut(s) 334
BsmI GAATGC 1 cut(s) 913
BsnI GGCC 2 cut(s) 314, 917
BsoBI CYCGRG 1 cut(s) 712
Bsp1286I GDGCHC 1 cut(s) 599
Bsp143I GATC 3 cut(s) 141, 689, 721
BspACI CCGC 8 cut(s) 189, 192, 246, 371, 468, 483, 701, 889
BspANI GGCC 2 cut(s) 314, 917
BspCNI CTCAG 2 cut(s) 301, 763
BspFNI CGCG 1 cut(s) 468
BspLI GGNNCC 2 cut(s) 691, 723
BspMAI CTGCAG 1 cut(s) 634
BspPI GGATC 4 cut(s) 684, 697, 716, 729
BsrI ACTGG 3 cut(s) 605, 762, 897
BssECI CCNNGG 3 cut(s) 76, 351, 712
BssMI GATC 3 cut(s) 141, 689, 721
BssNI GRCGYC 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 76
Bst4CI ACNGT 2 cut(s) 91, 491
Bst6I CTCTTC 3 cut(s) 228, 609, 818
BstACI GRCGYC 1 cut(s) 120
BstC8I GCNNGC 2 cut(s) 348, 369
BstDEI CTNAG 3 cut(s) 301, 309, 771
BstF5I GGATG 4 cut(s) 106, 177, 580, 836
BstFNI CGCG 1 cut(s) 468
BstKTI GATC 3 cut(s) 144, 692, 724
BstMAI GTCTC 3 cut(s) 64, 310, 334
BstMBI GATC 3 cut(s) 141, 689, 721
BstMWI GCNNNNNNNGC 4 cut(s) 164, 252, 261, 506
BstNSI RCATGY 1 cut(s) 878
BstSCI CCNGG 3 cut(s) 351, 711, 712
BstSFI CTRYAG 3 cut(s) 87, 340, 630
BstSLI GKGCMC 1 cut(s) 599
BstUI CGCG 1 cut(s) 468
BstV1I GCAGC 3 cut(s) 379, 640, 644
BstX2I RGATCY 2 cut(s) 689, 721
BstXI CCANNNNNNTGG 1 cut(s) 422
BstYI RGATCY 2 cut(s) 689, 721
BsuRI GGCC 2 cut(s) 314, 917
BtsCI GGATG 4 cut(s) 106, 177, 580, 836
BtsIMutI CAGTG 1 cut(s) 496
Cac8I GCNNGC 2 cut(s) 348, 369
Cfr9I CCCGGG 1 cut(s) 712
CseI GACGC 1 cut(s) 109
Csp6I GTAC 2 cut(s) 755, 815
CviAII CATG 5 cut(s) 23, 387, 517, 875, 919
CviQI GTAC 2 cut(s) 755, 815
DdeI CTNAG 3 cut(s) 301, 309, 771
DpnI GATC 3 cut(s) 143, 691, 723
DpnII GATC 3 cut(s) 141, 689, 721
EaeI YGGCCR 1 cut(s) 915
Eam1104I CTCTTC 3 cut(s) 228, 609, 818
EarI CTCTTC 3 cut(s) 228, 609, 818
EciI GGCGGA 1 cut(s) 178
Eco130I CCWWGG 1 cut(s) 76
Eco57I CTGAAG 2 cut(s) 456, 839
Eco88I CYCGRG 1 cut(s) 712
EcoT14I CCWWGG 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 76
Esp3I CGTCTC 1 cut(s) 334
FaeI CATG 5 cut(s) 26, 390, 520, 878, 922
FalI AAGNNNNNCTT 2 cut(s) 253, 285
FatI CATG 5 cut(s) 22, 386, 516, 874, 918
FauI CCCGC 1 cut(s) 708
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 6 cut(s) 192, 247, 372, 393, 633, 654
FokI GGATG 4 cut(s) 93, 164, 567, 843
Fsp4HI GCNGC 6 cut(s) 192, 247, 372, 393, 633, 654
FspBI CTAG 1 cut(s) 77
GluI GCNGC 6 cut(s) 192, 247, 372, 393, 633, 654
GsuI CTGGAG 1 cut(s) 516
HaeIII GGCC 2 cut(s) 314, 917
HapII CCGG 2 cut(s) 353, 713
HgaI GACGC 1 cut(s) 109
Hin1I GRCGYC 1 cut(s) 120
Hin1II CATG 5 cut(s) 26, 390, 520, 878, 922
HincII GTYRAC 2 cut(s) 337, 621
HindII GTYRAC 2 cut(s) 337, 621
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 3 cut(s) 72, 383, 892
HpaI GTTAAC 1 cut(s) 621
HpaII CCGG 2 cut(s) 353, 713
HphI GGTGA 2 cut(s) 195, 497
Hpy166II GTNNAC 4 cut(s) 49, 232, 337, 621
Hpy188I TCNGA 5 cut(s) 310, 436, 689, 694, 726
Hpy188III TCNNGA 2 cut(s) 110, 943
Hpy8I GTNNAC 4 cut(s) 49, 232, 337, 621
HpyAV CCTTC 1 cut(s) 949
HpyCH4III ACNGT 2 cut(s) 91, 491
HpyCH4IV ACGT 2 cut(s) 36, 135
HpyCH4V TGCA 5 cut(s) 167, 255, 458, 632, 656
HpyF10VI GCNNNNNNNGC 4 cut(s) 164, 252, 261, 506
HpyF3I CTNAG 3 cut(s) 301, 309, 771
HpySE526I ACGT 2 cut(s) 36, 135
Hsp92I GRCGYC 1 cut(s) 120
Hsp92II CATG 5 cut(s) 26, 390, 520, 878, 922
KspAI GTTAAC 1 cut(s) 621
Kzo9I GATC 3 cut(s) 141, 689, 721
LmnI GCTCC 1 cut(s) 497
Lsp1109I GCAGC 3 cut(s) 379, 640, 644
MaeI CTAG 1 cut(s) 77
MaeII ACGT 2 cut(s) 36, 135
MaeIII GTNAC 1 cut(s) 485
MalI GATC 3 cut(s) 143, 691, 723
MboI GATC 3 cut(s) 141, 689, 721
MboII GAAGA 8 cut(s) 23, 215, 261, 449, 626, 832, 835, 934
MflI RGATCY 2 cut(s) 689, 721
MhlI GDGCHC 1 cut(s) 599
MlsI TGGCCA 1 cut(s) 917
MluCI AATT 3 cut(s) 527, 737, 946
MluNI TGGCCA 1 cut(s) 917
MlyI GAGTC 1 cut(s) 66
MnlI CCTC 9 cut(s) 105, 231, 236, 302, 304, 532, 805, 841, 862
Mox20I TGGCCA 1 cut(s) 917
MscI TGGCCA 1 cut(s) 917
MseI TTAA 4 cut(s) 33, 42, 555, 620
MslI CAYNNNNRTG 2 cut(s) 420, 807
Msp20I TGGCCA 1 cut(s) 917
MspA1I CMGCKG 1 cut(s) 371
MspI CCGG 2 cut(s) 353, 713
MspR9I CCNGG 3 cut(s) 353, 713, 714
Mva1269I GAATGC 1 cut(s) 913
MvnI CGCG 1 cut(s) 468
MwoI GCNNNNNNNGC 4 cut(s) 164, 252, 261, 506
NciI CCSGG 3 cut(s) 353, 713, 714
NdeII GATC 3 cut(s) 141, 689, 721
NlaIII CATG 5 cut(s) 26, 390, 520, 878, 922
NlaIV GGNNCC 2 cut(s) 691, 723
NmuCI GTSAC 1 cut(s) 485
NspI RCATGY 1 cut(s) 878
PciI ACATGT 1 cut(s) 874
PctI GAATGC 1 cut(s) 913
PfeI GAWTC 2 cut(s) 383, 892
PflMI CCANNNNNTGG 1 cut(s) 116
PkrI GCNGC 6 cut(s) 193, 248, 373, 394, 634, 655
PleI GAGTC 1 cut(s) 66
PpsI GAGTC 1 cut(s) 66
PscI ACATGT 1 cut(s) 874
PspN4I GGNNCC 2 cut(s) 691, 723
PstI CTGCAG 1 cut(s) 634
PsuI RGATCY 2 cut(s) 689, 721
RsaI GTAC 2 cut(s) 756, 816
RsaNI GTAC 2 cut(s) 755, 815
RseI CAYNNNNRTG 2 cut(s) 420, 807
SaqAI TTAA 4 cut(s) 33, 42, 555, 620
SatI GCNGC 6 cut(s) 192, 247, 372, 393, 633, 654
Sau3AI GATC 3 cut(s) 141, 689, 721
ScaI AGTACT 1 cut(s) 756
SchI GAGTC 1 cut(s) 66
ScrFI CCNGG 3 cut(s) 353, 713, 714
SduI GDGCHC 1 cut(s) 599
SfcI CTRYAG 3 cut(s) 87, 340, 630
SmaI CCCGGG 1 cut(s) 714
SmiMI CAYNNNNRTG 2 cut(s) 420, 807
Sse9I AATT 3 cut(s) 527, 737, 946
SsiI CCGC 8 cut(s) 189, 192, 246, 371, 468, 483, 701, 889
SspMI CTAG 1 cut(s) 77
StyD4I CCNGG 3 cut(s) 351, 711, 712
StyI CCWWGG 1 cut(s) 76
TaaI ACNGT 2 cut(s) 91, 491
TaiI ACGT 2 cut(s) 39, 138
TaqI TCGA 1 cut(s) 61
TasI AATT 3 cut(s) 527, 737, 946
TatI WGTACW 1 cut(s) 754
TauI GCSGC 3 cut(s) 194, 249, 374
TfiI GAWTC 2 cut(s) 383, 892
Tru1I TTAA 4 cut(s) 33, 42, 555, 620
Tru9I TTAA 4 cut(s) 33, 42, 555, 620
TscAI CASTG 1 cut(s) 496
TseFI GTSAC 1 cut(s) 485
TseI GCWGC 3 cut(s) 392, 632, 653
Tsp45I GTSAC 1 cut(s) 485
TspDTI ATGAA 2 cut(s) 375, 935
TspGWI ACGGA 1 cut(s) 255
TspMI CCCGGG 1 cut(s) 712
TspRI CASTG 1 cut(s) 496
Van91I CCANNNNNTGG 1 cut(s) 116
XceI RCATGY 1 cut(s) 878
XmaI CCCGGG 1 cut(s) 712
XmaJI CCTAGG 1 cut(s) 76
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 1 cut(s) 77
ZrmI AGTACT 1 cut(s) 756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.