RLG00000014621

Carboxylesterase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
55518262 .. 55519893
1632 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014621

Sequence Viewer

Length: 1137 bp
ATGGCTACTTGTTTTTATGGCCTTTCGGCCCTTTCCATGTCTTTATGTCCAAAACCAAAAACTCAGACTTTCACTGTAAACCTCCATTCCAATCCCCCCTCTTCTTCATTCACACATCTCTCTTTTCCACGCAGAAAGCCCTTAATTATTACTCGCTCACAGACCTCCTCCTCCCTCGCCATGGATACAAATCCAAGCACTGAAGTACACAAAGACTTCTCTCCATTCCTCAAAATCTACAAAGACGGCCGAATCGAACGCCTCGCCAATACTGACTTTGTTCCAACATCGTTTGATCCCCAAACCGGTGTCGAAACCAAAGACGCTGTGATCTCAGAGGAAACAGGGCTCACTGTTAGACTCTACATCCCCAAAGCCAAAATTACTGAAAACCCAACAAAGCTTCCTCTCCTTGTTTACTACCATGGAGGTGGGTTTTGTATGGGGTCACCATTCTGTGCCTATTACAACAGCTATGTCAGTTCCTTGGTTGCCAAAGCAAATGTGATTGCTGTGTCTGTGGCTTATAGAAAGGCCCCAGAAAACCCTCTGCCAATTGGGTTTGAAGATTCATGGGCCGCGCTCAAATGGGTTGGATCCCATTTTGAGGGAAAAGGACCAGACGAGTGGCTGAATTCCTATGCTGATTTTGGGAAAGTGTTCTTGGGTGGTGATAGTGCTGGGGCTAATATAGCACATCACATGGGTTTGAGAATTGGGTATGAGGGTTTGGTTGGTGTGAAGCTCAATGGGGTTGTTTTAGTGCATCCCTATTTTTGGGGGTCAGAACCAGTTGGGGCTGAATCGACTGTAGCTGAAAATAGAGCGATGGCTGAAGCTATATGGAGGTTTGCTTTTCCGACCACGAGTGGGGCGGATGATCCGTTGATAAACCCGGGTAAGGATCCGAAATTGGGGAAGTTGGCAGCGGAGAGAGTGCTGGTTTTTGTTGCTGAGAAGGATGGGTTGGTGCATAGGGGGAGGCATTACAGTGAGCTGTTGAAGAAAAGTGAGTGGAGTGGGGGTGTGGAGGTTGTAGAGTCTAAGGAGGAGGATCATGTGTTTCATTTGAACAATCCGACTTGTGATAATGCTGTGGCTCTGATGAAGGAGATTGTTTCCTTCATCAATGCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

379

Amino Acids

41.38

Weight (kDa)

6.47

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 106 - 233 6.2e-10 Carboxylesterase family
BD-FAE PF20434 131 - 238 2.6e-07 BD-FAE
Abhydrolase_3 PF07859 138 - 356 5.4e-48 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 581
AciI CCGC 3 cut(s) 579, 875, 929
AclWI GGATC 7 cut(s) 290, 591, 604, 875, 899, 912, 1062
AcoI YGGCCR 1 cut(s) 247
AcsI RAATTY 1 cut(s) 634
AcuI CTGAAG 2 cut(s) 222, 855
AfaI GTAC 1 cut(s) 207
AfiI CCNNNNNNNGG 7 cut(s) 181, 305, 607, 777, 870, 901, 914
AgeI ACCGGT 1 cut(s) 305
AgsI TTSAA 3 cut(s) 566, 1003, 1072
AjuI GAANNNNNNNTTGG 4 cut(s) 647, 679, 950, 982
AluBI AGCT 6 cut(s) 403, 474, 745, 815, 839, 997
AluI AGCT 6 cut(s) 403, 474, 745, 815, 839, 997
AlwI GGATC 7 cut(s) 290, 591, 604, 875, 899, 912, 1062
Ama87I CYCGRG 1 cut(s) 895
AoxI GGCC 5 cut(s) 19, 27, 247, 534, 576
ApeKI GCWGC 1 cut(s) 926
ApoI RAATTY 1 cut(s) 634
AsiGI ACCGGT 1 cut(s) 305
Asp700I GAANNNNTTC 1 cut(s) 659
AspLEI GCGC 1 cut(s) 583
AspS9I GGNCC 4 cut(s) 28, 535, 576, 617
AsuC2I CCSGG 2 cut(s) 896, 897
AsuHPI GGTGA 2 cut(s) 441, 683
AvaI CYCGRG 1 cut(s) 895
AvaII GGWCC 1 cut(s) 617
BamHI GGATCC 2 cut(s) 596, 904
BanII GRGCYC 1 cut(s) 351
BauI CACGAG 1 cut(s) 865
BbvI GCAGC 1 cut(s) 938
BccI CCATC 2 cut(s) 823, 956
BceAI ACGGC 1 cut(s) 262
BciVI GTATCC 1 cut(s) 178
BcnI CCSGG 2 cut(s) 896, 897
BfmI CTRYAG 1 cut(s) 810
BfuI GTATCC 1 cut(s) 178
BisI GCNGC 2 cut(s) 579, 927
BlsI GCNGC 2 cut(s) 580, 928
Bme1390I CCNGG 2 cut(s) 896, 897
Bme18I GGWCC 1 cut(s) 617
BmeT110I CYCGRG 1 cut(s) 895
BmgT120I GGNCC 4 cut(s) 28, 535, 576, 617
BmiI GGNNCC 3 cut(s) 537, 598, 906
BmrFI CCNGG 2 cut(s) 896, 897
BmsI GCATC 1 cut(s) 775
BpuMI CCSGG 2 cut(s) 896, 897
BsaBI GATNNNNATC 1 cut(s) 189
BsaJI CCNNGG 4 cut(s) 180, 424, 486, 895
BsaWI WCCGGW 1 cut(s) 305
BsaXI ACNNNNNCTCC 2 cut(s) 1009, 1039
Bsc4I CCNNNNNNNGG 7 cut(s) 181, 305, 607, 777, 870, 901, 914
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 1 cut(s) 791
Bse8I GATNNNNATC 1 cut(s) 189
BseDI CCNNGG 4 cut(s) 180, 424, 486, 895
BseGI GGATG 4 cut(s) 366, 766, 883, 967
BseJI GATNNNNATC 1 cut(s) 189
BseLI CCNNNNNNNGG 7 cut(s) 181, 305, 607, 777, 870, 901, 914
BseMII CTCAG 3 cut(s) 77, 348, 945
BseNI ACTGG 1 cut(s) 791
BseRI GAGGAG 3 cut(s) 157, 160, 1064
BseX3I CGGCCG 1 cut(s) 247
BseXI GCAGC 1 cut(s) 938
BseYI CCCAGC 1 cut(s) 680
Bsh1236I CGCG 1 cut(s) 581
Bsh1285I CGRYCG 1 cut(s) 250
BshFI GGCC 5 cut(s) 21, 29, 249, 536, 578
BshTI ACCGGT 1 cut(s) 305
BsiEI CGRYCG 1 cut(s) 250
BsiHKCI CYCGRG 1 cut(s) 895
BsiSI CCGG 2 cut(s) 306, 896
BslI CCNNNNNNNGG 7 cut(s) 181, 305, 607, 777, 870, 901, 914
BsnI GGCC 5 cut(s) 21, 29, 249, 536, 578
BsoBI CYCGRG 1 cut(s) 895
Bsp1286I GDGCHC 1 cut(s) 351
Bsp143I GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
Bsp19I CCATGG 2 cut(s) 180, 424
BspACI CCGC 3 cut(s) 579, 875, 929
BspANI GGCC 5 cut(s) 21, 29, 249, 536, 578
BspCNI CTCAG 3 cut(s) 76, 347, 946
BspFNI CGCG 1 cut(s) 581
BspLI GGNNCC 3 cut(s) 537, 598, 906
BspPI GGATC 7 cut(s) 290, 591, 604, 875, 899, 912, 1062
BsrFI RCCGGY 1 cut(s) 305
BsrI ACTGG 1 cut(s) 791
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 4 cut(s) 180, 424, 486, 895
BssMI GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
BssSI CACGAG 1 cut(s) 865
BssT1I CCWWGG 3 cut(s) 180, 424, 486
Bst2BI CACGAG 1 cut(s) 865
Bst4CI ACNGT 4 cut(s) 76, 355, 811, 992
Bst6I CTCTTC 1 cut(s) 106
BstDEI CTNAG 4 cut(s) 63, 334, 954, 1044
BstDSI CCRYGG 2 cut(s) 180, 424
BstEII GGTNACC 1 cut(s) 447
BstF5I GGATG 4 cut(s) 366, 766, 883, 967
BstFNI CGCG 1 cut(s) 581
BstHHI GCGC 1 cut(s) 583
BstKTI GATC 6 cut(s) 298, 333, 599, 883, 907, 1057
BstMBI GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
BstMCI CGRYCG 1 cut(s) 250
BstMWI GCNNNNNNNGC 1 cut(s) 692
BstPI GGTNACC 1 cut(s) 447
BstSCI CCNGG 2 cut(s) 894, 895
BstSFI CTRYAG 1 cut(s) 810
BstUI CGCG 1 cut(s) 581
BstV1I GCAGC 1 cut(s) 938
BstX2I RGATCY 2 cut(s) 596, 904
BstXI CCANNNNNNTGG 2 cut(s) 431, 627
BstYI RGATCY 2 cut(s) 596, 904
BstZI CGGCCG 1 cut(s) 247
BsuI GTATCC 1 cut(s) 178
BsuRI GGCC 5 cut(s) 21, 29, 249, 536, 578
BtgI CCRYGG 2 cut(s) 180, 424
BtgZI GCGATG 1 cut(s) 842
BtsCI GGATG 4 cut(s) 366, 766, 883, 967
BtsIMutI CAGTG 4 cut(s) 72, 198, 351, 997
CfoI GCGC 1 cut(s) 583
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 4 cut(s) 28, 535, 576, 617
Cfr9I CCCGGG 1 cut(s) 895
CseI GACGC 1 cut(s) 332
Csp6I GTAC 1 cut(s) 206
CspAI ACCGGT 1 cut(s) 305
CviAII CATG 6 cut(s) 37, 181, 425, 573, 703, 1058
CviQI GTAC 1 cut(s) 206
DdeI CTNAG 4 cut(s) 63, 334, 954, 1044
DpnI GATC 6 cut(s) 297, 332, 598, 882, 906, 1056
DpnII GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
EaeI YGGCCR 1 cut(s) 247
EagI CGGCCG 1 cut(s) 247
Eam1104I CTCTTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 106
EciI GGCGGA 1 cut(s) 890
EclXI CGGCCG 1 cut(s) 247
Eco130I CCWWGG 3 cut(s) 180, 424, 486
Eco24I GRGCYC 1 cut(s) 351
Eco47I GGWCC 1 cut(s) 617
Eco52I CGGCCG 1 cut(s) 247
Eco57I CTGAAG 2 cut(s) 222, 855
Eco88I CYCGRG 1 cut(s) 895
Eco91I GGTNACC 1 cut(s) 447
EcoO109I RGGNCCY 1 cut(s) 535
EcoO65I GGTNACC 1 cut(s) 447
EcoRI GAATTC 1 cut(s) 634
EcoT14I CCWWGG 3 cut(s) 180, 424, 486
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 3 cut(s) 180, 424, 486
FaeI CATG 6 cut(s) 40, 184, 428, 576, 706, 1061
FatI CATG 6 cut(s) 36, 180, 424, 572, 702, 1057
Fnu4HI GCNGC 2 cut(s) 579, 927
FokI GGATG 4 cut(s) 353, 753, 890, 974
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 2 cut(s) 579, 927
GlaI GCGC 1 cut(s) 582
GluI GCNGC 2 cut(s) 579, 927
GsaI CCCAGC 1 cut(s) 684
HaeIII GGCC 5 cut(s) 21, 29, 249, 536, 578
HapII CCGG 2 cut(s) 306, 896
HgaI GACGC 1 cut(s) 332
HhaI GCGC 1 cut(s) 583
Hin1II CATG 6 cut(s) 40, 184, 428, 576, 706, 1061
Hin6I GCGC 1 cut(s) 581
HinP1I GCGC 1 cut(s) 581
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 5 cut(s) 252, 360, 569, 803, 1040
HpaII CCGG 2 cut(s) 306, 896
HphI GGTGA 2 cut(s) 441, 683
Hpy166II GTNNAC 3 cut(s) 79, 208, 418
Hpy188I TCNGA 7 cut(s) 66, 337, 787, 861, 909, 1080, 1104
Hpy8I GTNNAC 3 cut(s) 79, 208, 418
HpyAV CCTTC 3 cut(s) 952, 1102, 1132
HpyCH4III ACNGT 4 cut(s) 76, 355, 811, 992
HpyCH4V TGCA 2 cut(s) 766, 973
HpyF10VI GCNNNNNNNGC 1 cut(s) 692
HpyF3I CTNAG 4 cut(s) 63, 334, 954, 1044
Hsp92II CATG 6 cut(s) 40, 184, 428, 576, 706, 1061
HspAI GCGC 1 cut(s) 581
Kzo9I GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
LpnPI CCDG 8 cut(s) 319, 330, 552, 633, 666, 804, 909, 926
Lsp1109I GCAGC 1 cut(s) 938
LweI GCATC 1 cut(s) 775
MaeIII GTNAC 1 cut(s) 447
MalI GATC 6 cut(s) 297, 332, 598, 882, 906, 1056
MboI GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
MboII GAAGA 4 cut(s) 93, 96, 578, 1015
MfeI CAATTG 1 cut(s) 555
MflI RGATCY 2 cut(s) 596, 904
MhlI GDGCHC 1 cut(s) 351
MluCI AATT 6 cut(s) 144, 381, 555, 634, 714, 911
MlyI GAGTC 2 cut(s) 354, 1049
MmeI TCCRAC 4 cut(s) 308, 574, 884, 1103
MroXI GAANNNNTTC 1 cut(s) 659
MseI TTAA 1 cut(s) 143
MslI CAYNNNNRTG 2 cut(s) 429, 990
MspA1I CMGCKG 1 cut(s) 929
MspI CCGG 2 cut(s) 306, 896
MspR9I CCNGG 2 cut(s) 896, 897
MunI CAATTG 1 cut(s) 555
MvnI CGCG 1 cut(s) 581
MwoI GCNNNNNNNGC 1 cut(s) 692
NciI CCSGG 2 cut(s) 896, 897
NcoI CCATGG 2 cut(s) 180, 424
NdeII GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
NlaIII CATG 6 cut(s) 40, 184, 428, 576, 706, 1061
NlaIV GGNNCC 3 cut(s) 537, 598, 906
NmuCI GTSAC 1 cut(s) 447
PcsI WCGNNNNNNNCGW 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 659
PfeI GAWTC 3 cut(s) 252, 569, 803
PinAI ACCGGT 1 cut(s) 305
PkrI GCNGC 2 cut(s) 580, 928
PleI GAGTC 2 cut(s) 354, 1048
PpsI GAGTC 2 cut(s) 354, 1048
PspEI GGTNACC 1 cut(s) 447
PspFI CCCAGC 1 cut(s) 680
PspN4I GGNNCC 3 cut(s) 537, 598, 906
PspPI GGNCC 4 cut(s) 28, 535, 576, 617
PsuI RGATCY 2 cut(s) 596, 904
RsaI GTAC 1 cut(s) 207
RsaNI GTAC 1 cut(s) 206
RseI CAYNNNNRTG 2 cut(s) 429, 990
SaqAI TTAA 1 cut(s) 143
SatI GCNGC 2 cut(s) 579, 927
Sau3AI GATC 6 cut(s) 295, 330, 596, 880, 904, 1054
Sau96I GGNCC 4 cut(s) 28, 535, 576, 617
SchI GAGTC 2 cut(s) 354, 1049
ScrFI CCNGG 2 cut(s) 896, 897
SduI GDGCHC 1 cut(s) 351
SfaNI GCATC 1 cut(s) 775
SfcI CTRYAG 1 cut(s) 810
SinI GGWCC 1 cut(s) 617
SmaI CCCGGG 1 cut(s) 897
SmiMI CAYNNNNRTG 2 cut(s) 429, 990
Sse9I AATT 6 cut(s) 144, 381, 555, 634, 714, 911
SsiI CCGC 3 cut(s) 579, 875, 929
StyD4I CCNGG 2 cut(s) 894, 895
StyI CCWWGG 3 cut(s) 180, 424, 486
TaaI ACNGT 4 cut(s) 76, 355, 811, 992
TaqI TCGA 3 cut(s) 255, 312, 806
TasI AATT 6 cut(s) 144, 381, 555, 634, 714, 911
TatI WGTACW 1 cut(s) 205
TauI GCSGC 1 cut(s) 581
TfiI GAWTC 3 cut(s) 252, 569, 803
Tru1I TTAA 1 cut(s) 143
Tru9I TTAA 1 cut(s) 143
TscAI CASTG 4 cut(s) 79, 205, 358, 997
TseFI GTSAC 1 cut(s) 447
TseI GCWGC 1 cut(s) 926
Tsp45I GTSAC 1 cut(s) 447
TspDTI ATGAA 5 cut(s) 96, 561, 1055, 1114, 1121
TspGWI ACGGA 1 cut(s) 873
TspMI CCCGGG 1 cut(s) 895
TspRI CASTG 4 cut(s) 79, 205, 358, 997
VpaK11BI GGWCC 1 cut(s) 617
XapI RAATTY 1 cut(s) 634
XmaI CCCGGG 1 cut(s) 895
XmnI GAANNNNTTC 1 cut(s) 659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.