Prupe.8G121600_v2.0.a1

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000397
Physical Location & Seq
Reverse (-)
14753833 .. 14754787
955 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G121600.1

Sequence Viewer

Length: 855 bp
ATGGGCAACGAAGAATTAGCCTATGATTTCTCTCCAATAATTAAAGTATACAAAGATGGTCGAGTTGAAAGACTCAAAGACACAGACATAGTTCCTCCATCAACAGATCCCAAAACTGGCGTCCAATCAAAAGACGTTGTGATCTCACAAGAACCAGCCATATCTGCAAGGCTTTACATCCCAAAATCAACCACCGCCACCACCACCACAAGCGCACCCCAAACCAAACTCCCTCTTCTCATTTACTTTCATGGAGGCGGCTTCTGCATTGGAAGTTCATCTTCTTCAACATATCACAGCTACCTCAACGCCTTAGTCTCTGAGGCCAATGTTGTAGCTGTCTCTGTTGACTATAGGCTTGCCCTAGAGCACCCTCTGCCAGCTGCATATGATGATTCATGGGCTGCTCTCAAATGGCGTGTGTTTTTCGCTGGGGCTAATATAACACACAACATGGCTGTGAAATCGGGGTGTGTGAGATTGGTTGGTGTTAAGTTGATTGGGATTGTTTTGGTGCATCCGTACTTTTGGGGCACAGAGCCAGTTGGGGCAGAGTTAACTACTCCTGCAGATGCAAGAGAGTTTATGGCTGCTGTGTGGCGTTTTGCTTGCCCTTCGACTAGTGGATCCGACGACCCGCAATTGGGTTGTGTGAAAGTGCTGGTTTTTGTTGCTGAGAAAGATGTGTTGAAAGATAGAGGATGGCATTACAGTGAGACACTGAAAAGGAGCGGGTGGAATGGGGATGTGGAGGTCATAGAAGCAGAGGGGGAGGGGCATGTGTTCCATTGGATCAATCCCACTTGCGACAATGCTGTGGCCATGGAGAAAAAGATTGTTGCTTTCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

285

Amino Acids

31.05

Weight (kDa)

5.76

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000397)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48690 AT3G48700
fragaria_vesca FvH4_2g06400 FvH4_2g06430 FvH4_2g06450 FvH4_2g06480 FvH4_2g06560
malus_domestica MD05G1076400.v1.1 MD05G1076500.v1.1 MD05G1078900.v1.1 MD05G1191000.v1.1 MD05G1191100.v1.1 MD08G1226300.v1.1 MD10G1091000.v1.1 MD10G1091200.v1.1 MD10G1091400.v1.1 MD10G1091600.v1.1 MD10G1091900.v1.1
prunus_persica Prupe.8G120800_v2.0.a1 Prupe.8G121100_v2.0.a1 Prupe.8G121200_v2.0.a1 Prupe.8G121300_v2.0.a1 Prupe.8G121400_v2.0.a1 Prupe.8G121500_v2.0.a1 Prupe.8G121600_v2.0.a1 Prupe.8G121700_v2.0.a1 Prupe.8G121900_v2.0.a1 Prupe.8G122000_v2.0.a1 Prupe.I000800_v2.0.a1
pyrus_communis pycom05g07040 pycom05g17560 pycom05g17680 pycom05g17760 pycom10g07450 pycom10g07470 pycom10g07550
rosa_chinensis RchiOBHm_Chr6g0258271 RchiOBHm_Chr6g0258281 RchiOBHm_Chr6g0258291 RchiOBHm_Chr6g0258311 RchiOBHm_Chr6g0258321 RchiOBHm_Chr6g0258501
rosa_laevigata RLG00000014606 RLG00000014621 RLG00000014622 RLG00000014624 RLG00000014625 RLG00000014627 RLG00000014629 RLG00000014633 RLG00000014635
rosa_multiflora Rmu_co8014592.1_g000001 Rmu_co8366243.1_g000001 Rmu_sc0001663.1_g000004 Rmu_sc0005877.1_g000001 Rmu_sc0005877.1_g000006 Rmu_sc0005877.1_g000007 Rmu_sc0007367.1_g000009 Rmu_sc0007367.1_g000019 Rmu_sc0010616.1_g000022 Rmu_sc0010616.1_g000023 Rmu_ssc0000213.1_g000009
rosa_roxburghii Rroxscaffold_178G00437230 Rroxscaffold_178G00437250 Rroxscaffold_178G00437280 Rroxscaffold_178G00437320 Rroxscaffold_178G00437340 Rroxscaffold_178G00437350 Rroxscaffold_178G00437480 Rroxscaffold_7G00205390 Rroxscaffold_7G00205410 Rroxscaffold_7G00205450 Rroxscaffold_7G00205490 Rroxscaffold_7G00205510 Rroxscaffold_7G00205520 Rroxscaffold_7G00205670 Rroxscaffold_7G00205730
rosa_rugosa Rorug05G0579800 Rorug05G0580500 Rorug05G0580600 Rorug05G0580700 Rorug05G0580900 Rorug05G0581000 Rorug05G0581900
rosa_samantha Rh6CG084800 Rh6CG085100 Rh6CG085200 Rh6CG085400 Rh6CG085500 Rh6CG085600 Rh6CG085700 Rh6CG086900
rosa_wichuraiana Rw6G008300 Rw6G008310 Rw6G008360 Rw6G008370 Rw6G008380 Rw6G008390 Rw6G008430 Rw6G008440 Rw6G008530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 732
AccI GTMKAC 1 cut(s) 48
AciI CCGC 4 cut(s) 195, 258, 638, 732
AclWI GGATC 4 cut(s) 101, 621, 634, 800
AcoI YGGCCR 1 cut(s) 819
AcyI GRCGYC 1 cut(s) 120
AfaI GTAC 1 cut(s) 524
AfiI CCNNNNNNNGG 3 cut(s) 116, 643, 644
AgsI TTSAA 4 cut(s) 68, 288, 691, 850
AhlI ACTAGT 1 cut(s) 620
AluBI AGCT 3 cut(s) 300, 338, 383
AluI AGCT 3 cut(s) 300, 338, 383
Alw21I GWGCWC 1 cut(s) 372
Alw26I GTCTC 3 cut(s) 322, 346, 710
AlwI GGATC 4 cut(s) 101, 621, 634, 800
AoxI GGCC 2 cut(s) 324, 819
ApeKI GCWGC 3 cut(s) 383, 404, 590
ArsI GACNNNNNNTTYG 2 cut(s) 105, 137
AspLEI GCGC 1 cut(s) 215
BaeGI GKGCMC 1 cut(s) 536
BalI TGGCCA 1 cut(s) 821
BamHI GGATCC 1 cut(s) 626
Bbv12I GWGCWC 1 cut(s) 372
BbvI GCAGC 3 cut(s) 370, 391, 577
BccI CCATC 3 cut(s) 50, 106, 696
BcoDI GTCTC 3 cut(s) 322, 346, 710
BcuI ACTAGT 1 cut(s) 620
BfaI CTAG 2 cut(s) 365, 621
BfmI CTRYAG 2 cut(s) 352, 567
BisI GCNGC 4 cut(s) 259, 384, 405, 591
BlsI GCNGC 4 cut(s) 260, 385, 406, 592
BmiI GGNNCC 1 cut(s) 628
BmsI GCATC 2 cut(s) 526, 562
BsaHI GRCGYC 1 cut(s) 120
BsaJI CCNNGG 1 cut(s) 822
Bsc4I CCNNNNNNNGG 3 cut(s) 116, 643, 644
Bse1I ACTGG 2 cut(s) 121, 542
BseDI CCNNGG 1 cut(s) 822
BseGI GGATG 4 cut(s) 177, 517, 707, 751
BseLI CCNNNNNNNGG 3 cut(s) 116, 643, 644
BseMII CTCAG 2 cut(s) 312, 666
BseNI ACTGG 2 cut(s) 121, 542
BseSI GKGCMC 1 cut(s) 536
BseXI GCAGC 3 cut(s) 370, 391, 577
BseYI CCCAGC 1 cut(s) 431
BshFI GGCC 2 cut(s) 326, 821
BsiHKAI GWGCWC 1 cut(s) 372
BslI CCNNNNNNNGG 3 cut(s) 116, 643, 644
BsmAI GTCTC 3 cut(s) 322, 346, 710
BsnI GGCC 2 cut(s) 326, 821
Bsp1286I GDGCHC 2 cut(s) 372, 536
Bsp143I GATC 4 cut(s) 106, 141, 626, 792
Bsp19I CCATGG 1 cut(s) 822
BspACI CCGC 4 cut(s) 195, 258, 638, 732
BspANI GGCC 2 cut(s) 326, 821
BspCNI CTCAG 2 cut(s) 313, 667
BspLI GGNNCC 1 cut(s) 628
BspMAI CTGCAG 1 cut(s) 571
BspPI GGATC 4 cut(s) 101, 621, 634, 800
BsrBI CCGCTC 1 cut(s) 732
BsrI ACTGG 2 cut(s) 121, 542
BssECI CCNNGG 1 cut(s) 822
BssMI GATC 4 cut(s) 106, 141, 626, 792
BssNAI GTATAC 1 cut(s) 49
BssNI GRCGYC 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 822
Bst1107I GTATAC 1 cut(s) 49
Bst4CI ACNGT 1 cut(s) 713
Bst6I CTCTTC 1 cut(s) 240
BstACI GRCGYC 1 cut(s) 120
BstAPI GCANNNNNTGC 1 cut(s) 376
BstC8I GCNNGC 3 cut(s) 360, 381, 610
BstDEI CTNAG 3 cut(s) 313, 321, 675
BstDSI CCRYGG 1 cut(s) 822
BstF5I GGATG 4 cut(s) 177, 517, 707, 751
BstHHI GCGC 1 cut(s) 215
BstKTI GATC 4 cut(s) 109, 144, 629, 795
BstMAI GTCTC 3 cut(s) 322, 346, 710
BstMBI GATC 4 cut(s) 106, 141, 626, 792
BstMWI GCNNNNNNNGC 3 cut(s) 164, 264, 376
BstNSI RCATGY 1 cut(s) 782
BstSFI CTRYAG 2 cut(s) 352, 567
BstSLI GKGCMC 1 cut(s) 536
BstV1I GCAGC 3 cut(s) 370, 391, 577
BstX2I RGATCY 2 cut(s) 106, 626
BstYI RGATCY 2 cut(s) 106, 626
BstZ17I GTATAC 1 cut(s) 49
BsuRI GGCC 2 cut(s) 326, 821
BtgI CCRYGG 1 cut(s) 822
BtsCI GGATG 4 cut(s) 177, 517, 707, 751
BtsIMutI CAGTG 2 cut(s) 718, 719
Cac8I GCNNGC 3 cut(s) 360, 381, 610
CfoI GCGC 1 cut(s) 215
CseI GACGC 1 cut(s) 109
Csp6I GTAC 1 cut(s) 523
CviAII CATG 5 cut(s) 251, 399, 454, 779, 823
CviQI GTAC 1 cut(s) 523
DdeI CTNAG 3 cut(s) 313, 321, 675
DpnI GATC 4 cut(s) 108, 143, 628, 794
DpnII GATC 4 cut(s) 106, 141, 626, 792
EaeI YGGCCR 1 cut(s) 819
Eam1104I CTCTTC 1 cut(s) 240
EarI CTCTTC 1 cut(s) 240
Eco130I CCWWGG 1 cut(s) 822
EcoT14I CCWWGG 1 cut(s) 822
ErhI CCWWGG 1 cut(s) 822
FaeI CATG 5 cut(s) 254, 402, 457, 782, 826
FalI AAGNNNNNCTT 2 cut(s) 265, 297
FatI CATG 5 cut(s) 250, 398, 453, 778, 822
FauI CCCGC 2 cut(s) 645, 725
FauNDI CATATG 1 cut(s) 388
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 4 cut(s) 259, 384, 405, 591
FokI GGATG 4 cut(s) 164, 504, 714, 758
Fsp4HI GCNGC 4 cut(s) 259, 384, 405, 591
FspBI CTAG 2 cut(s) 365, 621
GlaI GCGC 1 cut(s) 214
GluI GCNGC 4 cut(s) 259, 384, 405, 591
GsaI CCCAGC 1 cut(s) 435
HaeIII GGCC 2 cut(s) 326, 821
HgaI GACGC 1 cut(s) 109
HhaI GCGC 1 cut(s) 215
Hin1I GRCGYC 1 cut(s) 120
Hin1II CATG 5 cut(s) 254, 402, 457, 782, 826
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HincII GTYRAC 2 cut(s) 349, 558
HindII GTYRAC 2 cut(s) 349, 558
HinfI GANTC 2 cut(s) 72, 395
HpaI GTTAAC 1 cut(s) 558
Hpy166II GTNNAC 3 cut(s) 49, 349, 558
Hpy188I TCNGA 2 cut(s) 322, 631
Hpy188III TCNNGA 1 cut(s) 847
Hpy8I GTNNAC 3 cut(s) 49, 349, 558
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 1 cut(s) 624
HpyCH4III ACNGT 1 cut(s) 713
HpyCH4IV ACGT 1 cut(s) 135
HpyCH4V TGCA 6 cut(s) 167, 267, 386, 517, 569, 575
HpyF10VI GCNNNNNNNGC 3 cut(s) 164, 264, 376
HpyF3I CTNAG 3 cut(s) 313, 321, 675
HpySE526I ACGT 1 cut(s) 135
Hsp92I GRCGYC 1 cut(s) 120
Hsp92II CATG 5 cut(s) 254, 402, 457, 782, 826
HspAI GCGC 1 cut(s) 213
KspAI GTTAAC 1 cut(s) 558
Kzo9I GATC 4 cut(s) 106, 141, 626, 792
LmnI GCTCC 1 cut(s) 729
LpnPI CCDG 7 cut(s) 102, 168, 393, 417, 555, 579, 647
Lsp1109I GCAGC 3 cut(s) 370, 391, 577
LweI GCATC 2 cut(s) 526, 562
MaeI CTAG 2 cut(s) 365, 621
MaeII ACGT 1 cut(s) 135
MalI GATC 4 cut(s) 108, 143, 628, 794
MbiI CCGCTC 1 cut(s) 732
MboI GATC 4 cut(s) 106, 141, 626, 792
MboII GAAGA 4 cut(s) 23, 227, 273, 276
MfeI CAATTG 1 cut(s) 641
MflI RGATCY 2 cut(s) 106, 626
MhlI GDGCHC 2 cut(s) 372, 536
MlsI TGGCCA 1 cut(s) 821
MluCI AATT 4 cut(s) 14, 39, 641, 850
MluNI TGGCCA 1 cut(s) 821
MlyI GAGTC 1 cut(s) 66
MmeI TCCRAC 1 cut(s) 654
Mox20I TGGCCA 1 cut(s) 821
MscI TGGCCA 1 cut(s) 821
MseI TTAA 3 cut(s) 42, 492, 557
MslI CAYNNNNRTG 2 cut(s) 458, 711
Msp20I TGGCCA 1 cut(s) 821
MspA1I CMGCKG 1 cut(s) 383
MunI CAATTG 1 cut(s) 641
MwoI GCNNNNNNNGC 3 cut(s) 164, 264, 376
NcoI CCATGG 1 cut(s) 822
NdeI CATATG 1 cut(s) 388
NdeII GATC 4 cut(s) 106, 141, 626, 792
NlaIII CATG 5 cut(s) 254, 402, 457, 782, 826
NlaIV GGNNCC 1 cut(s) 628
NspI RCATGY 1 cut(s) 782
PfeI GAWTC 1 cut(s) 395
PkrI GCNGC 4 cut(s) 260, 385, 406, 592
PleI GAGTC 1 cut(s) 66
PpsI GAGTC 1 cut(s) 66
PspFI CCCAGC 1 cut(s) 431
PspN4I GGNNCC 1 cut(s) 628
PstI CTGCAG 1 cut(s) 571
PsuI RGATCY 2 cut(s) 106, 626
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 1 cut(s) 524
RsaNI GTAC 1 cut(s) 523
RseI CAYNNNNRTG 2 cut(s) 458, 711
SaqAI TTAA 3 cut(s) 42, 492, 557
SatI GCNGC 4 cut(s) 259, 384, 405, 591
Sau3AI GATC 4 cut(s) 106, 141, 626, 792
SchI GAGTC 1 cut(s) 66
SduI GDGCHC 2 cut(s) 372, 536
SetI ASST 6 cut(s) 138, 302, 306, 340, 385, 756
SfaNI GCATC 2 cut(s) 526, 562
SfcI CTRYAG 2 cut(s) 352, 567
SmiMI CAYNNNNRTG 2 cut(s) 458, 711
SpeI ACTAGT 1 cut(s) 620
Sse9I AATT 4 cut(s) 14, 39, 641, 850
SsiI CCGC 4 cut(s) 195, 258, 638, 732
SspMI CTAG 2 cut(s) 365, 621
StyI CCWWGG 1 cut(s) 822
TaaI ACNGT 1 cut(s) 713
TaiI ACGT 1 cut(s) 138
TaqI TCGA 2 cut(s) 61, 617
TasI AATT 4 cut(s) 14, 39, 641, 850
TauI GCSGC 1 cut(s) 261
TfiI GAWTC 1 cut(s) 395
Tru1I TTAA 3 cut(s) 42, 492, 557
Tru9I TTAA 3 cut(s) 42, 492, 557
TscAI CASTG 2 cut(s) 718, 726
TseI GCWGC 3 cut(s) 383, 404, 590
TspDTI ATGAA 3 cut(s) 239, 267, 387
TspGWI ACGGA 1 cut(s) 510
TspRI CASTG 2 cut(s) 718, 726
XceI RCATGY 1 cut(s) 782
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 2 cut(s) 365, 621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.