FvH4_7g30260

Heat shock protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000335
Physical Location & Seq
Forward (+)
22091471 .. 22094241
2771 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g30260.t1

Sequence Viewer

Length: 2112 bp
ATGGCGGATGTTCAAATGGGTGACGCTGAGACCTTCGCGTTCCAGGCCGAGATCAACCAGCTTCTGAGCTTGATCATCAATACGTTCTACAGCAACAAGGAGATTTTCCTTCGCGAGCTCATCAGCAATTCATCAGATGCTTTGGATAAGATTAGATTTGAGAGTCTGACGGATAAGAGCAAGCTGGATGCTCAGCCGGAGCTCTTCATCAGGCTCGTTCCGGATAAGACCAACAATACTCTCTCCATTATTGATAGCGGAATCGGCATGACCAAAGCAGATTTGGTGAACAACTTGGGAACAATTGCAAGGTCTGGAACCAAGGAGTTTATGGAAGCATTGGCTTCTGGAGTGTCTGATGTGAGTATGATTGGACAGTTCGGTGTTGGTTTCTACTCGGCTTATCTTGTTGCAGAGAAGGTCATTGTGACAACAAAGCACAACGATGATGAGCAGTACATCTGGGAGTCTCAAGCTGGTGGTTCCTTCACCGTGACAAGGGATGTCAATGGTGAGCAGCTTGGAAGGGGAACAAAGATTACCCTCTTTCTCAAGGAGGACCAGTTGGAATACTTGGAGGAGAGGAGGATCAAAGACCTTGTAAAGAAGCATTCGGAATTCATCAGCTACCCCATCTACTTGTGGACTGAGAAGACTACTGAAAAGGAGATTAGTGATGATGAAGAAGATGAACCCAAGAAGGAAGAGGAAGGAGATATTGAGGAAGTTGACGAGGAGAAAGATAAAGAAGGAAAGAAAAAGAAGAAGATCAAGGAAGTTTCTCACGAGTGGGAGCTCATAAACAAGCAGAAACCTATCTGGCTCCGCAAGCCTGAAGAGATAACCAAGGAGGAATATGCAGCATTCTATAAGAGCTTGACCAATGATTGGGAGGAGCACCTTGCCGTGAAGCATTTCTCTGTTGAAGGGCAGCTGGAATTCAAGGCCATCCTCTTTGTTCCAAAGAGAGCTCCATTTGACTTGTTTGACACCAGGAAGAAGATGAACAACATCAAGCTGTATGTCAGGAGGGTATTCATTATGGACAACTGTGAGGAGCTCATTCCGGAGTACCTTGGGTTTGTTAAGGGTGTTGTGGATTCTGATGACTTGCCGCTCAACATTTCTCGTGAGACTCTTCAACAGAACAAGATTCTGAAGGTGATCAGGAAGAACCTTGTGAAGAAGTGCATTGAGATGTTCAATGAGATAGCTGAGAACAAGGAGGATTACACCAAGTTTTATGAGGCATTCTCGAAGAACTTGAAGTTGGGTATTCATGAAGACAGCCAGAACAGGGCCAAATTGGCTGACCTTCTCCGTTACCACTCCACCAAGAGTGGCGAAGATCTCACCAGTTTGAAGGACTATGTAACTCGAATGAAGGAGGGACAGAAGGATATCTATTACATTACTGGTGAGAGCAAAAAGGCAGTGGAAAACTCACCATTCTTGGAGCGTCTGAAGAAGAAGGGATACGAAGTTCTTTTCATGGTGGATGCAATCGATGAATACGCTGTGGGACAGTTGAAGGAGTATGATGGGAAGAAGCTTGTATCTGCTACAAAGGAAGGTCTGAAGTTGGATGATGAGACTGAGGAAGAGAAGACGAAAAAAGAGGAGAAGAAAAAGTCTTTTGAGAACCTTTGCAAGACAATCAAAGACATCTTGGGTGACAGGGTTGAGAAGGTGGTTGTGTCTGATAGGATTGTCGACTCACCTTGCTGCTTGGTCACTGGTGAATATGGCTGGAGTGCAAACATGGAGAGAATTATGAAGGCGCAGGCATTGAGGGACAACAGCATGGGTGCTTATATGTCAAGCAAGAAGACAATGGAAATCAACCCTGACAATGGCATCATGGAGGAGCTGAGGAAGAGAGCTGAAGCTGACAAGAACGACAAGTCCGTGAAGGACCTTGTGCTGCTGCTGTTTGAGACAGCTCTCTTGACATCTGGATTCAGCCTTGATGAACCAAACACCTTCGCCTCGAGGATCCACAGGATGTTGAAGCTGGGGCTTAGCATAGAGGAAGATGAGACTGTTGAGGATGCTGACATGCCTGAGTTGGAGGATGCGGCTGAGGAGAGCAAAATGGAGGAGGTGGATTAA

Protein Analysis

704

Amino Acids

80.84

Weight (kDa)

4.96

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c PF02518 34 - 187 2.7e-07 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3 PF13589 35 - 152 4.9e-08 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90 PF00183 190 - 698 7.2e-242 Hsp90 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000335)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52640
fragaria_vesca FvH4_2g04730 FvH4_2g04730 FvH4_2g04730 FvH4_2g13180 FvH4_7g30260 FvH4_7g30272
malus_domestica MD00G1081900.v1.1 MD01G1208700.v1.1 MD07G1279100.v1.1 MD07G1279200.v1.1 MD11G1152300.v1.1 MD14G1110500.v1.1 MD14G1110600.v1.1
prunus_persica Prupe.2G301300_v2.0.a1 Prupe.5G041100_v2.0.a1 Prupe.5G105600_v2.0.a1
pyrus_communis pycom01g21930 pycom07g25400 pycom09g11140 pycom14g10530
rosa_chinensis RchiOBHm_Chr1g0327061 RchiOBHm_Chr1g0378391 RchiOBHm_Chr1g0379711 RchiOBHm_Chr3g0488481 RchiOBHm_Chr4g0387881 RchiOBHm_Chr5g0021331 RchiOBHm_Chr5g0021341 RchiOBHm_Chr5g0021351 RchiOBHm_Chr6g0274441 RchiOBHm_Chr7g0196751 RchiOBHm_Chr7g0196771
rosa_laevigata RLG00000003992 RLG00000008392 RLG00000009018 RLG00000013542 RLG00000026364 RLG00000026365 RLG00000026438 RLG00000032605
rosa_multiflora Rmu_co8309643.1_g000001 Rmu_co8423093.1_g000001 Rmu_co8520529.1_g000002 Rmu_sc0000938.1_g000001 Rmu_sc0001083.1_g000031 Rmu_sc0001289.1_g000016 Rmu_sc0001777.1_g000013 Rmu_sc0003392.1_g000006 Rmu_sc0003600.1_g000010 Rmu_sc0004484.1_g000024 Rmu_sc0004847.1_g000017 Rmu_sc0009850.1_g000016 Rmu_sc0013411.1_g000009 Rmu_sc0024337.1_g000001 Rmu_sc0024338.1_g000001 Rmu_sc0029385.1_g000001 Rmu_sc0039495.1_g000001 Rmu_ssc0000259.1_g000042
rosa_roxburghii Rroxscaffold_1G00057180 Rroxscaffold_3G00258970 Rroxscaffold_3G00258980 Rroxscaffold_4G00280480 Rroxscaffold_7G00194220 Rroxscaffold_7G00197660
rosa_rugosa Rorug01G0408500 Rorug05G0066400 Rorug05G0066500 Rorug06G0081900 Rorug07G0036200
rosa_samantha Rh1AG083900 Rh1AG430000 Rh1AG438200 Rh1AG438300 Rh1BG387700 Rh1BG394700 Rh1BG394800 Rh1CG081800 Rh1CG401200 Rh1CG407700 Rh1CG407800 Rh1DG327400 Rh1DG418800 Rh1DG425100 Rh1DG425200 Rh2AG541400 Rh2CG384100 Rh2CG524100 Rh4DG107200 Rh5AG155400 Rh5AG155500 Rh5AG155600 Rh5BG155000 Rh5BG155100 Rh5CG168500 Rh5CG168600 Rh5CG168700 Rh5DG155600 Rh6AG198300 Rh6BG201600 Rh6BG491300 Rh6CG202400 Rh6DG192800 Rh7AG160000 Rh7AG160100 Rh7BG162200 Rh7CG168600 Rh7DG161300
rosa_wichuraiana Rw1G037630 Rw5G013860 Rw6G017240 Rw7G013990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1990
AccB7I CCANNNNNTGG 1 cut(s) 888
AccBSI CCGCTC 1 cut(s) 1117
AccI GTMKAC 1 cut(s) 1713
AccII CGCG 2 cut(s) 38, 114
AccIII TCCGGA 2 cut(s) 220, 1066
AciI CCGC 5 cut(s) 5, 258, 826, 1115, 2078
AclWI GGATC 3 cut(s) 596, 1990, 2003
AcsI RAATTY 2 cut(s) 617, 938
AcuI CTGAAG 5 cut(s) 855, 1178, 1484, 1598, 1905
AfaI GTAC 2 cut(s) 458, 1073
AfiI CCNNNNNNNGG 4 cut(s) 498, 888, 1297, 1853
AgsI TTSAA 9 cut(s) 14, 926, 943, 1142, 1204, 1267, 1363, 1531, 2011
AjnI CCWGG 2 cut(s) 42, 992
AjuI GAANNNNNNNTTGG 2 cut(s) 1253, 1285
AloI GAACNNNNNNTCC 4 cut(s) 1467, 1499, 1889, 1921
Alw21I GWGCWC 6 cut(s) 120, 204, 798, 900, 973, 1062
Alw26I GTCTC 6 cut(s) 23, 474, 1127, 1586, 1931, 2033
AlwI GGATC 3 cut(s) 596, 1990, 2003
AlwNI CAGNNNCTG 1 cut(s) 64
Ama87I CYCGRG 1 cut(s) 1990
Aor13HI TCCGGA 2 cut(s) 220, 1066
AoxI GGCC 3 cut(s) 45, 945, 1299
ApeKI GCWGC 6 cut(s) 517, 860, 931, 1725, 1924, 1927
ApoI RAATTY 2 cut(s) 617, 938
Asp700I GAANNNNTTC 1 cut(s) 914
AspLEI GCGC 1 cut(s) 1783
AspS9I GGNCC 3 cut(s) 559, 1299, 1915
AvaI CYCGRG 1 cut(s) 1990
AvaII GGWCC 2 cut(s) 559, 1915
BamHI GGATCC 1 cut(s) 1995
BanII GRGCYC 5 cut(s) 120, 204, 798, 973, 1062
BarI GAAGNNNNNNTAC 2 cut(s) 1460, 1492
BauI CACGAG 2 cut(s) 785, 1128
BbsI GAAGAC 4 cut(s) 659, 1290, 1613, 1835
Bbv12I GWGCWC 6 cut(s) 120, 204, 798, 900, 973, 1062
BbvCI CCTCAGC 2 cut(s) 1871, 2082
BbvI GCAGC 6 cut(s) 529, 872, 943, 1712, 1911, 1914
BccI CCATC 3 cut(s) 641, 956, 1535
BceAI ACGGC 1 cut(s) 890
BciT130I CCWGG 2 cut(s) 44, 994
BciVI GTATCC 1 cut(s) 1469
BclI TGATCA 2 cut(s) 72, 1164
BcoDI GTCTC 6 cut(s) 23, 474, 1127, 1586, 1931, 2033
BfmI CTRYAG 1 cut(s) 88
BfuI GTATCC 1 cut(s) 1469
BglI GCCNNNNNGGC 1 cut(s) 1307
BglII AGATCT 1 cut(s) 1348
BisI GCNGC 8 cut(s) 518, 861, 932, 1115, 1726, 1925, 1928, 2079
BlpI GCTNAGC 2 cut(s) 192, 2021
BlsI GCNGC 8 cut(s) 519, 862, 933, 1116, 1727, 1926, 1929, 2080
Bme1390I CCNGG 2 cut(s) 44, 994
Bme18I GGWCC 2 cut(s) 559, 1915
BmeT110I CYCGRG 1 cut(s) 1990
BmgT120I GGNCC 3 cut(s) 559, 1299, 1915
BmiI GGNNCC 4 cut(s) 319, 484, 824, 1997
BmrFI CCNGG 2 cut(s) 44, 994
BmsI GCATC 6 cut(s) 127, 178, 1489, 1866, 2041, 2065
BpiI GAAGAC 4 cut(s) 659, 1290, 1613, 1835
BplI GAGNNNNNCTC 2 cut(s) 1238, 1270
BpmI CTGGAG 2 cut(s) 369, 1771
Bpu10I CCTNAGC 2 cut(s) 1871, 2082
Bpu1102I GCTNAGC 2 cut(s) 192, 2021
BpuEI CTTGAG 2 cut(s) 456, 536
Bsa29I ATCGAT 1 cut(s) 1506
BsaI GGTCTC 1 cut(s) 23
BsaJI CCNNGG 3 cut(s) 321, 846, 1075
BsaWI WCCGGW 2 cut(s) 220, 1066
BsaXI ACNNNNNCTCC 2 cut(s) 548, 578
Bsc4I CCNNNNNNNGG 4 cut(s) 498, 888, 1297, 1853
Bse1I ACTGG 4 cut(s) 562, 1356, 1420, 1741
BseAI TCCGGA 2 cut(s) 220, 1066
BseBI CCWGG 2 cut(s) 44, 994
BseCI ATCGAT 1 cut(s) 1506
BseDI CCNNGG 3 cut(s) 321, 846, 1075
BseGI GGATG 9 cut(s) 13, 193, 508, 948, 1504, 1591, 2010, 2056, 2080
BseLI CCNNNNNNNGG 4 cut(s) 498, 888, 1297, 1853
BseMII CTCAG 9 cut(s) 18, 56, 206, 639, 1206, 1587, 1862, 2055, 2073
BseNI ACTGG 4 cut(s) 562, 1356, 1420, 1741
BseRI GAGGAG 8 cut(s) 593, 598, 749, 908, 1070, 1634, 1880, 2099
BseXI GCAGC 6 cut(s) 529, 872, 943, 1712, 1911, 1914
BseYI CCCAGC 1 cut(s) 2014
Bsh1236I CGCG 2 cut(s) 38, 114
BshFI GGCC 3 cut(s) 47, 947, 1301
BshVI ATCGAT 1 cut(s) 1506
BsiHKAI GWGCWC 6 cut(s) 120, 204, 798, 900, 973, 1062
BsiHKCI CYCGRG 1 cut(s) 1990
BsiSI CCGG 3 cut(s) 197, 221, 1067
BslFI GGGAC 3 cut(s) 1404, 1536, 1808
BslI CCNNNNNNNGG 4 cut(s) 498, 888, 1297, 1853
BsmAI GTCTC 6 cut(s) 23, 474, 1127, 1586, 1931, 2033
BsmFI GGGAC 3 cut(s) 1404, 1536, 1808
BsmI GAATGC 3 cut(s) 610, 863, 1250
BsnI GGCC 3 cut(s) 47, 947, 1301
Bso31I GGTCTC 1 cut(s) 23
BsoBI CYCGRG 1 cut(s) 1990
Bsp1286I GDGCHC 6 cut(s) 120, 204, 798, 900, 973, 1062
Bsp13I TCCGGA 2 cut(s) 220, 1066
Bsp143I GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
Bsp1720I GCTNAGC 2 cut(s) 192, 2021
Bsp68I TCGCGA 1 cut(s) 114
BspACI CCGC 5 cut(s) 5, 258, 826, 1115, 2078
BspANI GGCC 3 cut(s) 47, 947, 1301
BspCNI CTCAG 9 cut(s) 19, 57, 205, 640, 1207, 1588, 1863, 2056, 2074
BspDI ATCGAT 1 cut(s) 1506
BspEI TCCGGA 2 cut(s) 220, 1066
BspFNI CGCG 2 cut(s) 38, 114
BspHI TCATGA 1 cut(s) 1279
BspLI GGNNCC 4 cut(s) 319, 484, 824, 1997
BspPI GGATC 3 cut(s) 596, 1990, 2003
BspQI GCTCTTC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 23
BsrBI CCGCTC 1 cut(s) 1117
BsrI ACTGG 4 cut(s) 562, 1356, 1420, 1741
BssECI CCNNGG 3 cut(s) 321, 846, 1075
BssMI GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
BssSI CACGAG 2 cut(s) 785, 1128
BssT1I CCWWGG 3 cut(s) 321, 846, 1075
Bst2BI CACGAG 2 cut(s) 785, 1128
Bst2UI CCWGG 2 cut(s) 44, 994
Bst4CI ACNGT 5 cut(s) 378, 493, 1052, 1527, 2044
Bst6I CTCTTC 6 cut(s) 209, 699, 831, 1143, 1596, 1871
BstC8I GCNNGC 4 cut(s) 116, 182, 830, 1785
BstF5I GGATG 9 cut(s) 13, 193, 508, 948, 1504, 1591, 2010, 2056, 2080
BstFNI CGCG 2 cut(s) 38, 114
BstHHI GCGC 1 cut(s) 1783
BstKTI GATC 7 cut(s) 54, 75, 591, 771, 1167, 1351, 1998
BstMAI GTCTC 6 cut(s) 23, 474, 1127, 1586, 1931, 2033
BstMBI GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
BstMWI GCNNNNNNNGC 4 cut(s) 44, 264, 829, 1307
BstNI CCWGG 2 cut(s) 44, 994
BstNSI RCATGY 1 cut(s) 2062
BstSCI CCNGG 2 cut(s) 42, 992
BstSFI CTRYAG 1 cut(s) 88
BstUI CGCG 2 cut(s) 38, 114
BstV1I GCAGC 6 cut(s) 529, 872, 943, 1712, 1911, 1914
BstV2I GAAGAC 4 cut(s) 659, 1290, 1613, 1835
BstX2I RGATCY 2 cut(s) 1348, 1995
BstYI RGATCY 2 cut(s) 1348, 1995
Bsu15I ATCGAT 1 cut(s) 1506
BsuI GTATCC 1 cut(s) 1469
BsuRI GGCC 3 cut(s) 47, 947, 1301
BsuTUI ATCGAT 1 cut(s) 1506
BtsCI GGATG 9 cut(s) 13, 193, 508, 948, 1504, 1591, 2010, 2056, 2080
BtsI GCAGTG 1 cut(s) 1440
BtsIMutI CAGTG 2 cut(s) 1440, 1734
BtuMI TCGCGA 1 cut(s) 114
Cac8I GCNNGC 4 cut(s) 116, 182, 830, 1785
CaiI CAGNNNCTG 1 cut(s) 64
CciI TCATGA 1 cut(s) 1279
CfoI GCGC 1 cut(s) 1783
Cfr13I GGNCC 3 cut(s) 559, 1299, 1915
ClaI ATCGAT 1 cut(s) 1506
CseI GACGC 2 cut(s) 32, 1448
Csp6I GTAC 2 cut(s) 457, 1072
CviAII CATG 7 cut(s) 268, 1280, 1492, 1762, 1804, 1861, 2059
CviQI GTAC 2 cut(s) 457, 1072
DpnI GATC 7 cut(s) 53, 74, 590, 770, 1166, 1350, 1997
DpnII GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
Eam1104I CTCTTC 6 cut(s) 209, 699, 831, 1143, 1596, 1871
EarI CTCTTC 6 cut(s) 209, 699, 831, 1143, 1596, 1871
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 5 cut(s) 118, 202, 796, 971, 1060
Eco130I CCWWGG 3 cut(s) 321, 846, 1075
Eco24I GRGCYC 5 cut(s) 120, 204, 798, 973, 1062
Eco31I GGTCTC 1 cut(s) 23
Eco32I GATATC 1 cut(s) 1402
Eco47I GGWCC 2 cut(s) 559, 1915
Eco53kI GAGCTC 5 cut(s) 118, 202, 796, 971, 1060
Eco57I CTGAAG 5 cut(s) 855, 1178, 1484, 1598, 1905
Eco88I CYCGRG 1 cut(s) 1990
EcoICRI GAGCTC 5 cut(s) 118, 202, 796, 971, 1060
EcoO109I RGGNCCY 1 cut(s) 1915
EcoRI GAATTC 2 cut(s) 617, 938
EcoRII CCWGG 2 cut(s) 42, 992
EcoRV GATATC 1 cut(s) 1402
EcoT14I CCWWGG 3 cut(s) 321, 846, 1075
EcoT38I GRGCYC 5 cut(s) 120, 204, 798, 973, 1062
ErhI CCWWGG 3 cut(s) 321, 846, 1075
FaeI CATG 7 cut(s) 271, 1283, 1495, 1765, 1807, 1864, 2062
FaqI GGGAC 3 cut(s) 1404, 1536, 1808
FatI CATG 7 cut(s) 267, 1279, 1491, 1761, 1803, 1860, 2058
FbaI TGATCA 2 cut(s) 72, 1164
FblI GTMKAC 1 cut(s) 1713
Fnu4HI GCNGC 8 cut(s) 518, 861, 932, 1115, 1726, 1925, 1928, 2079
FokI GGATG 9 cut(s) 20, 200, 515, 935, 1511, 1598, 2017, 2063, 2087
FriOI GRGCYC 5 cut(s) 120, 204, 798, 973, 1062
Fsp4HI GCNGC 8 cut(s) 518, 861, 932, 1115, 1726, 1925, 1928, 2079
GlaI GCGC 1 cut(s) 1782
GluI GCNGC 8 cut(s) 518, 861, 932, 1115, 1726, 1925, 1928, 2079
GsaI CCCAGC 1 cut(s) 2018
GsuI CTGGAG 2 cut(s) 369, 1771
HaeIII GGCC 3 cut(s) 47, 947, 1301
HapII CCGG 3 cut(s) 197, 221, 1067
HgaI GACGC 2 cut(s) 32, 1448
HhaI GCGC 1 cut(s) 1783
Hin1II CATG 7 cut(s) 271, 1283, 1495, 1765, 1807, 1864, 2062
Hin6I GCGC 1 cut(s) 1781
HinP1I GCGC 1 cut(s) 1781
HincII GTYRAC 2 cut(s) 730, 1714
HindII GTYRAC 2 cut(s) 730, 1714
HindIII AAGCTT 1 cut(s) 1550
HinfI GANTC 8 cut(s) 163, 261, 467, 1100, 1135, 1153, 1715, 1959
HpaII CCGG 3 cut(s) 197, 221, 1067
Hpy166II GTNNAC 4 cut(s) 289, 645, 730, 1714
Hpy8I GTNNAC 4 cut(s) 289, 645, 730, 1714
HpyCH4III ACNGT 5 cut(s) 378, 493, 1052, 1527, 2044
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 7 cut(s) 308, 413, 860, 1191, 1502, 1650, 1757
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 264, 829, 1307
HpySE526I ACGT 1 cut(s) 83
Hsp92II CATG 7 cut(s) 271, 1283, 1495, 1765, 1807, 1864, 2062
HspAI GCGC 1 cut(s) 1781
Kpn2I TCCGGA 2 cut(s) 220, 1066
Ksp22I TGATCA 2 cut(s) 72, 1164
Kzo9I GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
LguI GCTCTTC 1 cut(s) 209
LmnI GCTCC 8 cut(s) 199, 793, 828, 895, 976, 1057, 1456, 1867
Lsp1109I GCAGC 6 cut(s) 529, 872, 943, 1712, 1911, 1914
LweI GCATC 6 cut(s) 127, 178, 1489, 1866, 2041, 2065
MaeII ACGT 1 cut(s) 83
MaeIII GTNAC 7 cut(s) 20, 427, 493, 1322, 1372, 1673, 1732
MalI GATC 7 cut(s) 53, 74, 590, 770, 1166, 1350, 1997
MbiI CCGCTC 1 cut(s) 1117
MboI GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
MfeI CAATTG 1 cut(s) 303
MflI RGATCY 2 cut(s) 1348, 1995
MhlI GDGCHC 6 cut(s) 120, 204, 798, 900, 973, 1062
MluCI AATT 6 cut(s) 127, 303, 617, 938, 1304, 1770
MlyI GAGTC 4 cut(s) 172, 476, 1129, 1709
MmeI TCCRAC 3 cut(s) 546, 1563, 2049
MroI TCCGGA 2 cut(s) 220, 1066
MroXI GAANNNNTTC 1 cut(s) 914
MseI TTAA 2 cut(s) 1086, 2110
MslI CAYNNNNRTG 2 cut(s) 444, 1196
MspA1I CMGCKG 1 cut(s) 934
MspI CCGG 3 cut(s) 197, 221, 1067
MspR9I CCNGG 2 cut(s) 44, 994
MunI CAATTG 1 cut(s) 303
Mva1269I GAATGC 3 cut(s) 610, 863, 1250
MvaI CCWGG 2 cut(s) 44, 994
MvnI CGCG 2 cut(s) 38, 114
MwoI GCNNNNNNNGC 4 cut(s) 44, 264, 829, 1307
NdeII GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
NlaIII CATG 7 cut(s) 271, 1283, 1495, 1765, 1807, 1864, 2062
NlaIV GGNNCC 4 cut(s) 319, 484, 824, 1997
NmeAIII GCCGAG 2 cut(s) 73, 377
NmuCI GTSAC 5 cut(s) 20, 427, 493, 1673, 1732
NruI TCGCGA 1 cut(s) 114
NspI RCATGY 1 cut(s) 2062
PaeR7I CTCGAG 1 cut(s) 1990
PagI TCATGA 1 cut(s) 1279
PciSI GCTCTTC 1 cut(s) 209
PcsI WCGNNNNNNNCGW 1 cut(s) 1905
PctI GAATGC 3 cut(s) 610, 863, 1250
PdmI GAANNNNTTC 1 cut(s) 914
PfeI GAWTC 4 cut(s) 261, 1100, 1153, 1959
PflMI CCANNNNNTGG 1 cut(s) 888
PkrI GCNGC 8 cut(s) 519, 862, 933, 1116, 1727, 1926, 1929, 2080
PleI GAGTC 4 cut(s) 171, 475, 1129, 1709
PpsI GAGTC 4 cut(s) 171, 475, 1129, 1709
PpuMI RGGWCCY 1 cut(s) 1915
Psp124BI GAGCTC 5 cut(s) 120, 204, 798, 973, 1062
Psp5II RGGWCCY 1 cut(s) 1915
Psp6I CCWGG 2 cut(s) 42, 992
PspFI CCCAGC 1 cut(s) 2014
PspGI CCWGG 2 cut(s) 42, 992
PspN4I GGNNCC 4 cut(s) 319, 484, 824, 1997
PspPI GGNCC 3 cut(s) 559, 1299, 1915
PspPPI RGGWCCY 1 cut(s) 1915
PspXI VCTCGAGB 1 cut(s) 1990
PsrI GAACNNNNNNTAC 2 cut(s) 523, 555
PstNI CAGNNNCTG 1 cut(s) 64
PsuI RGATCY 2 cut(s) 1348, 1995
PvuII CAGCTG 1 cut(s) 934
RruI TCGCGA 1 cut(s) 114
RsaI GTAC 2 cut(s) 458, 1073
RsaNI GTAC 2 cut(s) 457, 1072
RseI CAYNNNNRTG 2 cut(s) 444, 1196
SacI GAGCTC 5 cut(s) 120, 204, 798, 973, 1062
SalI GTCGAC 1 cut(s) 1712
SapI GCTCTTC 1 cut(s) 209
SaqAI TTAA 2 cut(s) 1086, 2110
SatI GCNGC 8 cut(s) 518, 861, 932, 1115, 1726, 1925, 1928, 2079
Sau3AI GATC 7 cut(s) 51, 72, 588, 768, 1164, 1348, 1995
Sau96I GGNCC 3 cut(s) 559, 1299, 1915
SchI GAGTC 4 cut(s) 172, 476, 1129, 1709
ScrFI CCNGG 2 cut(s) 44, 994
SduI GDGCHC 6 cut(s) 120, 204, 798, 900, 973, 1062
SfaNI GCATC 6 cut(s) 127, 178, 1489, 1866, 2041, 2065
SfcI CTRYAG 1 cut(s) 88
Sfr274I CTCGAG 1 cut(s) 1990
SinI GGWCC 2 cut(s) 559, 1915
SlaI CTCGAG 1 cut(s) 1990
SmiMI CAYNNNNRTG 2 cut(s) 444, 1196
SmlI CTYRAG 3 cut(s) 471, 551, 1990
SmoI CTYRAG 3 cut(s) 471, 551, 1990
Sse9I AATT 6 cut(s) 127, 303, 617, 938, 1304, 1770
SsiI CCGC 5 cut(s) 5, 258, 826, 1115, 2078
SstI GAGCTC 5 cut(s) 120, 204, 798, 973, 1062
StyD4I CCNGG 2 cut(s) 42, 992
StyI CCWWGG 3 cut(s) 321, 846, 1075
TaaI ACNGT 5 cut(s) 378, 493, 1052, 1527, 2044
TaiI ACGT 1 cut(s) 86
TaqI TCGA 5 cut(s) 1256, 1378, 1506, 1713, 1991
TasI AATT 6 cut(s) 127, 303, 617, 938, 1304, 1770
TatI WGTACW 1 cut(s) 456
TauI GCSGC 2 cut(s) 1117, 2081
TfiI GAWTC 4 cut(s) 261, 1100, 1153, 1959
Tru1I TTAA 2 cut(s) 1086, 2110
Tru9I TTAA 2 cut(s) 1086, 2110
TscAI CASTG 2 cut(s) 1440, 1741
TseFI GTSAC 5 cut(s) 20, 427, 493, 1673, 1732
TseI GCWGC 6 cut(s) 517, 860, 931, 1725, 1924, 1927
Tsp45I GTSAC 5 cut(s) 20, 427, 493, 1673, 1732
TspGWI ACGGA 3 cut(s) 185, 1310, 1897
TspRI CASTG 2 cut(s) 1440, 1741
Van91I CCANNNNNTGG 1 cut(s) 888
VpaK11BI GGWCC 2 cut(s) 559, 1915
XapI RAATTY 2 cut(s) 617, 938
XceI RCATGY 1 cut(s) 2062
XcmI CCANNNNNNNNNTGG 2 cut(s) 280, 328
XhoI CTCGAG 1 cut(s) 1990
XmiI GTMKAC 1 cut(s) 1713
XmnI GAANNNNTTC 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.