Prupe.5G105600_v2.0.a1

Heat shock protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000335
Physical Location & Seq
Forward (+)
11195383 .. 11197781
2399 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G105600.1

Sequence Viewer

Length: 1932 bp
ATGGCTGAAGAAGTTGCCATGGCAGACACTGAGACCTTTGCTTTCCAGGCAGAAATCAACCAGCTTTTGAGTTTGATCATCAACACCTTTTACAACAACAAGAAGATCTTCCTTCATGAGCTCATCAGCAATGCCTCTGATGCATTGGACAAGATTCGGTTCGAGAGCTTGACTGACAAGCGCAAGCTCGATTCTCAGCCTGAGCTTGTTATTAGGAATGTCCCTGACAAGTCCAACAGGACCCTCTCCATCATTGACACTGGCATTGGCATGACCAAATCAGATTTAGTAAACAACTTGGGGACAATTGCAAGGTCTGGGACAAAGGAGTTTATGGAGGCATTGCAGGCAGGGGCTGATGTGAGCATGATTGGGCAATTTGGTAGGGAGATTGTGACCACAAAGCACAATGATGATGAGCAGTATGTGTGGGAGTCTCAGGCTGGTGGTTCTTTCACCATCAGAAAGGATGTTGATGGAGAACCACTTGGTAGAGGAACCACGGTCACTCTCTTCCTCAAGGAAGACCAGTTGGAATTCTTGGAAGAGAGGAAGCTCAAGAAGCTGGTCAAGAAGCACTCTGAGTTCATAAGCTACCTTATTTATTTACAGGTTGAGAAGATTGTTGAGAAAGAGATCAATGATGATGAGCATGAAGATGGTGGGGAGGCTAAGAAGAAAGAAGGGGAGGGGGAGGTTGAGGAGGTGGATGAGGAGAAGGACAAAGAAGGGAGGCCCAAGAAGAAGAAGGTTAAAGAGGTGAGAAATGAGTGGGAGCTCATCAACAAGCAGAAGCCAATTTGGCTGAGGAAGCCTGAGGAGGTTTCAAAAGAGGAGTATGCTTTTTTCTACAAGAGCCTCACCAATGATTGGGAGGACCCTCTTGCTTGGAAGCACTTCTCTGTTGAGGGCCAGCTTGAATTCACAGCCATTCTCTTTGTTCCTAAAAGAGCCCCCTTTGACCTCTTTGACACAAGGAAGAAGATGAGCGATATCAAGCTATATGTGAGGAGGGTGTTTATCATGGACAACTGTGAGGAGCTCATGCCCAAGTACCTTGTGTTTGTGAAGGGTGTTGTGGATTTGGATGATCTGCCACTTAACATTTCTCGTGAAATGCTGCAGCAGAACAAGATTCTCAAGGTTATTAGGAAGAATCTGGTGAAGAAGTGCATTGAGTTGTTCAATGAGATTGCAGAGAATAAAGAGGACTATCTCAAGTTTTATGAGGCTTTCTCTAAGAACCTCAAGTTGGGTATCCATGAGGACAACCAGAACAGGGGTAAGTTGGCTGATTTGCTCAGGCTCAAGAAGAAAAGGTATGAAGTGATCTTTATGGTTAATGTCATTGATGAGTATGTTGTTGGGCAACTGAAAGAGTATGATGGGAAGAAGCCTGTCTCTGCAACCAAGGAAGGGCTCAAGCTCGAGGATGAATCGAAGGAAGAGAAGAGGAAGGAGGAGGAGAAGAAACAGTTATTTGAGAACCTGTGCAAGACAATGAAGGACATTCTTAGGGATAGAGTAGAGAAGGTGGTGGTGTCTGATAGAATTGTGGATTCACCTTGCTGCTTGGTGACTGGAGAATACCGGTGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCATTGAGGGACAACAGCATGAGTAGTTACATGGCTAGCAGGAAGATAATGGAGATCAACCCTGACAATGGCATAGTAAAGGAGCTAAGGAAGAGGGCTGATGTCAATAAGAATGACAAGTCGGTGAAGGATCTCGTGCTGCTGCTCTATGAGACTGCTCTCTTGACTTCTGGCTTCAGCCTTGATGATCCCAACACAATTGCAGGGAGGATTTACAGGATGCTGAAACTGGGTCTGAGAATTGATGATGATGATCCCAGACTGGATGACGATGTCGACGTGCCACCATTGGAGGAGAATTAG

Protein Analysis

644

Amino Acids

74.65

Weight (kDa)

5.36

Isoelectric Point (pI)

34.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000335)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52640
fragaria_vesca FvH4_2g04730 FvH4_2g04730 FvH4_2g04730 FvH4_2g13180 FvH4_7g30260 FvH4_7g30272
malus_domestica MD00G1081900.v1.1 MD01G1208700.v1.1 MD07G1279100.v1.1 MD07G1279200.v1.1 MD11G1152300.v1.1 MD14G1110500.v1.1 MD14G1110600.v1.1
prunus_persica Prupe.2G301300_v2.0.a1 Prupe.5G041100_v2.0.a1 Prupe.5G105600_v2.0.a1
pyrus_communis pycom01g21930 pycom07g25400 pycom09g11140 pycom14g10530
rosa_chinensis RchiOBHm_Chr1g0327061 RchiOBHm_Chr1g0378391 RchiOBHm_Chr1g0379711 RchiOBHm_Chr3g0488481 RchiOBHm_Chr4g0387881 RchiOBHm_Chr5g0021331 RchiOBHm_Chr5g0021341 RchiOBHm_Chr5g0021351 RchiOBHm_Chr6g0274441 RchiOBHm_Chr7g0196751 RchiOBHm_Chr7g0196771
rosa_laevigata RLG00000003992 RLG00000008392 RLG00000009018 RLG00000013542 RLG00000026364 RLG00000026365 RLG00000026438 RLG00000032605
rosa_multiflora Rmu_co8309643.1_g000001 Rmu_co8423093.1_g000001 Rmu_co8520529.1_g000002 Rmu_sc0000938.1_g000001 Rmu_sc0001083.1_g000031 Rmu_sc0001289.1_g000016 Rmu_sc0001777.1_g000013 Rmu_sc0003392.1_g000006 Rmu_sc0003600.1_g000010 Rmu_sc0004484.1_g000024 Rmu_sc0004847.1_g000017 Rmu_sc0009850.1_g000016 Rmu_sc0013411.1_g000009 Rmu_sc0024337.1_g000001 Rmu_sc0024338.1_g000001 Rmu_sc0029385.1_g000001 Rmu_sc0039495.1_g000001 Rmu_ssc0000259.1_g000042
rosa_roxburghii Rroxscaffold_1G00057180 Rroxscaffold_3G00258970 Rroxscaffold_3G00258980 Rroxscaffold_4G00280480 Rroxscaffold_7G00194220 Rroxscaffold_7G00197660
rosa_rugosa Rorug01G0408500 Rorug05G0066400 Rorug05G0066500 Rorug06G0081900 Rorug07G0036200
rosa_samantha Rh1AG083900 Rh1AG430000 Rh1AG438200 Rh1AG438300 Rh1BG387700 Rh1BG394700 Rh1BG394800 Rh1CG081800 Rh1CG401200 Rh1CG407700 Rh1CG407800 Rh1DG327400 Rh1DG418800 Rh1DG425100 Rh1DG425200 Rh2AG541400 Rh2CG384100 Rh2CG524100 Rh4DG107200 Rh5AG155400 Rh5AG155500 Rh5AG155600 Rh5BG155000 Rh5BG155100 Rh5CG168500 Rh5CG168600 Rh5CG168700 Rh5DG155600 Rh6AG198300 Rh6BG201600 Rh6BG491300 Rh6CG202400 Rh6DG192800 Rh7AG160000 Rh7AG160100 Rh7BG162200 Rh7CG168600 Rh7DG161300
rosa_wichuraiana Rw1G037630 Rw5G013860 Rw6G017240 Rw7G013990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 870
AccI GTMKAC 1 cut(s) 1905
AclWI GGATC 4 cut(s) 1622, 1767, 1811, 1877
AcsI RAATTY 2 cut(s) 536, 920
AcuI CTGAAG 2 cut(s) 27, 1789
AfaI GTAC 1 cut(s) 1055
AfiI CCNNNNNNNGG 5 cut(s) 870, 1252, 1279, 1416, 1697
AgeI ACCGGT 1 cut(s) 1590
AgsI TTSAA 3 cut(s) 828, 920, 1186
AjiI CACGTC 1 cut(s) 1909
AjnI CCWGG 1 cut(s) 45
AjuI GAANNNNNNNTTGG 2 cut(s) 1235, 1267
Alw21I GWGCWC 3 cut(s) 123, 780, 1044
Alw26I GTCTC 4 cut(s) 26, 441, 1405, 1775
AlwI GGATC 4 cut(s) 1622, 1767, 1811, 1877
AlwNI CAGNNNCTG 2 cut(s) 29, 356
Ama87I CYCGRG 1 cut(s) 1427
AoxI GGCC 2 cut(s) 734, 910
ApeKI GCWGC 5 cut(s) 1120, 1123, 1569, 1768, 1771
ApoI RAATTY 2 cut(s) 536, 920
AsiGI ACCGGT 1 cut(s) 1590
Asp700I GAANNNNTTC 2 cut(s) 107, 896
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 4 cut(s) 240, 735, 877, 910
AsuHPI GGTGA 7 cut(s) 448, 772, 853, 1174, 1554, 1588, 1765
AsuNHI GCTAGC 1 cut(s) 1664
AvaI CYCGRG 1 cut(s) 1427
AvaII GGWCC 2 cut(s) 240, 877
AxyI CCTNAGG 1 cut(s) 816
BanII GRGCYC 5 cut(s) 123, 780, 955, 1044, 1422
BauI CACGAG 2 cut(s) 1110, 1763
BbsI GAAGAC 1 cut(s) 531
Bbv12I GWGCWC 3 cut(s) 123, 780, 1044
BbvCI CCTCAGC 1 cut(s) 806
BbvI GCAGC 5 cut(s) 1107, 1135, 1556, 1755, 1758
BccI CCATC 5 cut(s) 257, 467, 470, 653, 1379
BciT130I CCWGG 1 cut(s) 47
BciVI GTATCC 1 cut(s) 1268
BclI TGATCA 1 cut(s) 75
BcoDI GTCTC 4 cut(s) 26, 441, 1405, 1775
BfaI CTAG 1 cut(s) 1665
BfmI CTRYAG 1 cut(s) 1121
BfuI GTATCC 1 cut(s) 1268
BglI GCCNNNNNGGC 1 cut(s) 802
BglII AGATCT 1 cut(s) 105
BisI GCNGC 5 cut(s) 1121, 1124, 1570, 1769, 1772
BlsI GCNGC 5 cut(s) 1122, 1125, 1571, 1770, 1773
Bme1390I CCNGG 1 cut(s) 47
Bme18I GGWCC 2 cut(s) 240, 877
BmeT110I CYCGRG 1 cut(s) 1427
BmgBI CACGTC 1 cut(s) 1909
BmgT120I GGNCC 4 cut(s) 240, 735, 877, 910
BmiI GGNNCC 3 cut(s) 242, 499, 879
BmrFI CCNGG 1 cut(s) 47
BmrI ACTGGG 1 cut(s) 1868
BmsI GCATC 2 cut(s) 130, 1839
BmtI GCTAGC 1 cut(s) 1668
BmuI ACTGGG 1 cut(s) 1868
BpiI GAAGAC 1 cut(s) 531
BplI GAGNNNNNCTC 2 cut(s) 1220, 1252
BpmI CTGGAG 1 cut(s) 1602
Bpu10I CCTNAGC 5 cut(s) 201, 806, 1301, 1626, 1715
BpuEI CTTGAG 7 cut(s) 503, 542, 1124, 1202, 1232, 1292, 1406
BsaBI GATNNNNATC 1 cut(s) 1881
BsaI GGTCTC 1 cut(s) 26
BsaJI CCNNGG 3 cut(s) 18, 501, 1410
BsaWI WCCGGW 1 cut(s) 1590
Bsc4I CCNNNNNNNGG 5 cut(s) 870, 1252, 1279, 1416, 1697
Bse118I RCCGGY 1 cut(s) 1590
Bse1I ACTGG 5 cut(s) 265, 529, 1585, 1863, 1896
Bse21I CCTNAGG 1 cut(s) 816
Bse3DI GCAATG 2 cut(s) 136, 341
Bse8I GATNNNNATC 1 cut(s) 1881
BseBI CCWGG 1 cut(s) 47
BseDI CCNNGG 3 cut(s) 18, 501, 1410
BseGI GGATG 6 cut(s) 475, 715, 1093, 1438, 1854, 1900
BseJI GATNNNNATC 1 cut(s) 1881
BseLI CCNNNNNNNGG 5 cut(s) 870, 1252, 1279, 1416, 1697
BseMI GCAATG 2 cut(s) 136, 341
BseNI ACTGG 5 cut(s) 265, 529, 1585, 1863, 1896
BseRI GAGGAG 8 cut(s) 716, 728, 833, 848, 1024, 1052, 1475, 1478
BseXI GCAGC 5 cut(s) 1107, 1135, 1556, 1755, 1758
BshFI GGCC 2 cut(s) 736, 912
BshTI ACCGGT 1 cut(s) 1590
BsiHKAI GWGCWC 3 cut(s) 123, 780, 1044
BsiHKCI CYCGRG 1 cut(s) 1427
BsiSI CCGG 1 cut(s) 1591
BslFI GGGAC 4 cut(s) 206, 316, 334, 1652
BslI CCNNNNNNNGG 5 cut(s) 870, 1252, 1279, 1416, 1697
BsmAI GTCTC 4 cut(s) 26, 441, 1405, 1775
BsmFI GGGAC 4 cut(s) 206, 316, 334, 1652
BsnI GGCC 2 cut(s) 736, 912
Bso31I GGTCTC 1 cut(s) 26
BsoBI CYCGRG 1 cut(s) 1427
Bsp1286I GDGCHC 5 cut(s) 123, 780, 955, 1044, 1422
Bsp19I CCATGG 1 cut(s) 18
BspANI GGCC 2 cut(s) 736, 912
BspHI TCATGA 2 cut(s) 115, 1617
BspLI GGNNCC 3 cut(s) 242, 499, 879
BspMAI CTGCAG 1 cut(s) 1125
BspOI GCTAGC 1 cut(s) 1668
BspPI GGATC 4 cut(s) 1622, 1767, 1811, 1877
BspTNI GGTCTC 1 cut(s) 26
BsrDI GCAATG 2 cut(s) 136, 341
BsrFI RCCGGY 1 cut(s) 1590
BsrI ACTGG 5 cut(s) 265, 529, 1585, 1863, 1896
BssAI RCCGGY 1 cut(s) 1590
BssECI CCNNGG 3 cut(s) 18, 501, 1410
BssSI CACGAG 2 cut(s) 1110, 1763
BssT1I CCWWGG 2 cut(s) 18, 1410
Bst2BI CACGAG 2 cut(s) 1110, 1763
Bst2UI CCWGG 1 cut(s) 47
Bst4CI ACNGT 3 cut(s) 505, 1034, 1476
Bst6I CTCTTC 5 cut(s) 518, 540, 1440, 1445, 1715
BstC8I GCNNGC 4 cut(s) 185, 348, 914, 1666
BstDSI CCRYGG 2 cut(s) 18, 501
BstF5I GGATG 6 cut(s) 475, 715, 1093, 1438, 1854, 1900
BstHHI GCGC 1 cut(s) 183
BstMAI GTCTC 4 cut(s) 26, 441, 1405, 1775
BstMWI GCNNNNNNNGC 6 cut(s) 47, 140, 347, 562, 802, 811
BstNI CCWGG 1 cut(s) 47
BstSCI CCNGG 1 cut(s) 45
BstSFI CTRYAG 1 cut(s) 1121
BstV1I GCAGC 5 cut(s) 1107, 1135, 1556, 1755, 1758
BstV2I GAAGAC 1 cut(s) 531
BstX2I RGATCY 2 cut(s) 105, 1759
BstYI RGATCY 2 cut(s) 105, 1759
Bsu36I CCTNAGG 1 cut(s) 816
BsuI GTATCC 1 cut(s) 1268
BsuRI GGCC 2 cut(s) 736, 912
BtgI CCRYGG 2 cut(s) 18, 501
BtrI CACGTC 1 cut(s) 1909
BtsCI GGATG 6 cut(s) 475, 715, 1093, 1438, 1854, 1900
BtsIMutI CAGTG 2 cut(s) 27, 258
Cac8I GCNNGC 4 cut(s) 185, 348, 914, 1666
CaiI CAGNNNCTG 2 cut(s) 29, 356
CciI TCATGA 2 cut(s) 115, 1617
CfoI GCGC 1 cut(s) 183
Cfr10I RCCGGY 1 cut(s) 1590
Cfr13I GGNCC 4 cut(s) 240, 735, 877, 910
Csp6I GTAC 1 cut(s) 1054
CspAI ACCGGT 1 cut(s) 1590
CviQI GTAC 1 cut(s) 1054
Eam1104I CTCTTC 5 cut(s) 518, 540, 1440, 1445, 1715
EarI CTCTTC 5 cut(s) 518, 540, 1440, 1445, 1715
Ecl136II GAGCTC 3 cut(s) 121, 778, 1042
Eco130I CCWWGG 2 cut(s) 18, 1410
Eco24I GRGCYC 5 cut(s) 123, 780, 955, 1044, 1422
Eco31I GGTCTC 1 cut(s) 26
Eco32I GATATC 1 cut(s) 994
Eco47I GGWCC 2 cut(s) 240, 877
Eco53kI GAGCTC 3 cut(s) 121, 778, 1042
Eco57I CTGAAG 2 cut(s) 27, 1789
Eco81I CCTNAGG 1 cut(s) 816
Eco88I CYCGRG 1 cut(s) 1427
EcoICRI GAGCTC 3 cut(s) 121, 778, 1042
EcoO109I RGGNCCY 2 cut(s) 240, 877
EcoRI GAATTC 2 cut(s) 536, 920
EcoRII CCWGG 1 cut(s) 45
EcoRV GATATC 1 cut(s) 994
EcoT14I CCWWGG 2 cut(s) 18, 1410
EcoT22I ATGCAT 1 cut(s) 145
EcoT38I GRGCYC 5 cut(s) 123, 780, 955, 1044, 1422
ErhI CCWWGG 2 cut(s) 18, 1410
FalI AAGNNNNNCTT 2 cut(s) 92, 124
FaqI GGGAC 4 cut(s) 206, 316, 334, 1652
FbaI TGATCA 1 cut(s) 75
FblI GTMKAC 1 cut(s) 1905
Fnu4HI GCNGC 5 cut(s) 1121, 1124, 1570, 1769, 1772
FokI GGATG 6 cut(s) 482, 722, 1100, 1445, 1861, 1907
FriOI GRGCYC 5 cut(s) 123, 780, 955, 1044, 1422
Fsp4HI GCNGC 5 cut(s) 1121, 1124, 1570, 1769, 1772
FspBI CTAG 1 cut(s) 1665
GlaI GCGC 1 cut(s) 182
GluI GCNGC 5 cut(s) 1121, 1124, 1570, 1769, 1772
GsuI CTGGAG 1 cut(s) 1602
HaeIII GGCC 2 cut(s) 736, 912
HapII CCGG 1 cut(s) 1591
HhaI GCGC 1 cut(s) 183
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HincII GTYRAC 1 cut(s) 1906
HindII GTYRAC 1 cut(s) 1906
HinfI GANTC 7 cut(s) 154, 191, 434, 1135, 1156, 1436, 1559
HpaII CCGG 1 cut(s) 1591
HphI GGTGA 7 cut(s) 448, 772, 853, 1174, 1554, 1588, 1765
Hpy166II GTNNAC 3 cut(s) 292, 1596, 1906
Hpy188I TCNGA 6 cut(s) 139, 283, 464, 583, 1546, 1866
Hpy188III TCNNGA 8 cut(s) 116, 163, 559, 571, 1112, 1309, 1618, 1792
Hpy8I GTNNAC 3 cut(s) 292, 1596, 1906
Hpy99I CGWCG 1 cut(s) 1910
HpyCH4III ACNGT 3 cut(s) 505, 1034, 1476
HpyCH4IV ACGT 1 cut(s) 1908
HpyCH4V TGCA 9 cut(s) 143, 311, 346, 1123, 1173, 1196, 1406, 1494, 1832
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 140, 347, 562, 802, 811
HpySE526I ACGT 1 cut(s) 1908
HspAI GCGC 1 cut(s) 181
Ksp22I TGATCA 1 cut(s) 75
LmnI GCTCC 3 cut(s) 775, 1039, 1711
Lsp1109I GCAGC 5 cut(s) 1107, 1135, 1556, 1755, 1758
LweI GCATC 2 cut(s) 130, 1839
MaeI CTAG 1 cut(s) 1665
MaeII ACGT 1 cut(s) 1908
MaeIII GTNAC 4 cut(s) 394, 505, 1576, 1655
MfeI CAATTG 2 cut(s) 306, 1827
MflI RGATCY 2 cut(s) 105, 1759
MhlI GDGCHC 5 cut(s) 123, 780, 955, 1044, 1422
MluCI AATT 9 cut(s) 306, 377, 536, 798, 920, 1551, 1827, 1869, 1927
MlyI GAGTC 1 cut(s) 443
MmeI TCCRAC 2 cut(s) 258, 513
Mph1103I ATGCAT 1 cut(s) 145
MroXI GAANNNNTTC 2 cut(s) 107, 896
MseI TTAA 3 cut(s) 753, 1101, 1341
MslI CAYNNNNRTG 3 cut(s) 269, 411, 657
MspI CCGG 1 cut(s) 1591
MspR9I CCNGG 1 cut(s) 47
MunI CAATTG 2 cut(s) 306, 1827
MvaI CCWGG 1 cut(s) 47
MwoI GCNNNNNNNGC 6 cut(s) 47, 140, 347, 562, 802, 811
NcoI CCATGG 1 cut(s) 18
NheI GCTAGC 1 cut(s) 1664
NlaIV GGNNCC 3 cut(s) 242, 499, 879
NmuCI GTSAC 3 cut(s) 394, 505, 1576
NsiI ATGCAT 1 cut(s) 145
PaeR7I CTCGAG 1 cut(s) 1427
PagI TCATGA 2 cut(s) 115, 1617
PcsI WCGNNNNNNNCGW 1 cut(s) 1905
PdmI GAANNNNTTC 2 cut(s) 107, 896
PfeI GAWTC 6 cut(s) 154, 191, 1135, 1156, 1436, 1559
PflFI GACNNNGTC 1 cut(s) 1901
PflMI CCANNNNNTGG 1 cut(s) 870
PinAI ACCGGT 1 cut(s) 1590
PkrI GCNGC 5 cut(s) 1122, 1125, 1571, 1770, 1773
PleI GAGTC 1 cut(s) 442
PpsI GAGTC 1 cut(s) 442
PpuMI RGGWCCY 2 cut(s) 240, 877
Psp124BI GAGCTC 3 cut(s) 123, 780, 1044
Psp5II RGGWCCY 2 cut(s) 240, 877
Psp6I CCWGG 1 cut(s) 45
PspGI CCWGG 1 cut(s) 45
PspN4I GGNNCC 3 cut(s) 242, 499, 879
PspPI GGNCC 4 cut(s) 240, 735, 877, 910
PspPPI RGGWCCY 2 cut(s) 240, 877
PspXI VCTCGAGB 1 cut(s) 1427
PstI CTGCAG 1 cut(s) 1125
PstNI CAGNNNCTG 2 cut(s) 29, 356
PsuI RGATCY 2 cut(s) 105, 1759
PsyI GACNNNGTC 1 cut(s) 1901
RsaI GTAC 1 cut(s) 1055
RsaNI GTAC 1 cut(s) 1054
RseI CAYNNNNRTG 3 cut(s) 269, 411, 657
SacI GAGCTC 3 cut(s) 123, 780, 1044
SalI GTCGAC 1 cut(s) 1904
SaqAI TTAA 3 cut(s) 753, 1101, 1341
SatI GCNGC 5 cut(s) 1121, 1124, 1570, 1769, 1772
Sau96I GGNCC 4 cut(s) 240, 735, 877, 910
SchI GAGTC 1 cut(s) 443
ScrFI CCNGG 1 cut(s) 47
SduI GDGCHC 5 cut(s) 123, 780, 955, 1044, 1422
SfaNI GCATC 2 cut(s) 130, 1839
SfcI CTRYAG 1 cut(s) 1121
Sfr274I CTCGAG 1 cut(s) 1427
SinI GGWCC 2 cut(s) 240, 877
SlaI CTCGAG 1 cut(s) 1427
SmiMI CAYNNNNRTG 3 cut(s) 269, 411, 657
SmlI CTYRAG 8 cut(s) 518, 557, 1139, 1217, 1247, 1307, 1421, 1427
SmoI CTYRAG 8 cut(s) 518, 557, 1139, 1217, 1247, 1307, 1421, 1427
Sse9I AATT 9 cut(s) 306, 377, 536, 798, 920, 1551, 1827, 1869, 1927
SspMI CTAG 1 cut(s) 1665
SstI GAGCTC 3 cut(s) 123, 780, 1044
StyD4I CCNGG 1 cut(s) 45
StyI CCWWGG 2 cut(s) 18, 1410
TaaI ACNGT 3 cut(s) 505, 1034, 1476
TaiI ACGT 1 cut(s) 1911
TaqI TCGA 5 cut(s) 162, 189, 1428, 1439, 1905
TasI AATT 9 cut(s) 306, 377, 536, 798, 920, 1551, 1827, 1869, 1927
TfiI GAWTC 6 cut(s) 154, 191, 1135, 1156, 1436, 1559
Tru1I TTAA 3 cut(s) 753, 1101, 1341
Tru9I TTAA 3 cut(s) 753, 1101, 1341
TscAI CASTG 2 cut(s) 34, 265
TseFI GTSAC 3 cut(s) 394, 505, 1576
TseI GCWGC 5 cut(s) 1120, 1123, 1569, 1768, 1771
Tsp45I GTSAC 3 cut(s) 394, 505, 1576
TspDTI ATGAA 7 cut(s) 104, 577, 669, 1338, 1449, 1517, 1634
TspRI CASTG 2 cut(s) 34, 265
Tth111I GACNNNGTC 1 cut(s) 1901
Van91I CCANNNNNTGG 1 cut(s) 870
VpaK11BI GGWCC 2 cut(s) 240, 877
XapI RAATTY 2 cut(s) 536, 920
XhoI CTCGAG 1 cut(s) 1427
XmiI GTMKAC 1 cut(s) 1905
XmnI GAANNNNTTC 2 cut(s) 107, 896
XspI CTAG 1 cut(s) 1665
Zsp2I ATGCAT 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.