Heat shock protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HSP90 | PF00183 | 1 - 78 | 1.2e-37 | Hsp90 protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 25 |
| AclWI | GGATC | 1 cut(s) | 106 |
| AcuI | CTGAAG | 1 cut(s) | 137 |
| AgsI | TTSAA | 4 cut(s) | 101, 163, 217, 227 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 213 |
| AluBI | AGCT | 1 cut(s) | 19 |
| AluI | AGCT | 1 cut(s) | 19 |
| Alw21I | GWGCWC | 1 cut(s) | 21 |
| AlwI | GGATC | 1 cut(s) | 106 |
| Aor13HI | TCCGGA | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| BanII | GRGCYC | 1 cut(s) | 21 |
| BauI | CACGAG | 1 cut(s) | 87 |
| Bbv12I | GWGCWC | 1 cut(s) | 21 |
| BclI | TGATCA | 1 cut(s) | 123 |
| BmsI | GCATC | 1 cut(s) | 84 |
| BsaWI | WCCGGW | 1 cut(s) | 25 |
| BseAI | TCCGGA | 1 cut(s) | 25 |
| BseMII | CTCAG | 1 cut(s) | 165 |
| BseRI | GAGGAG | 1 cut(s) | 29 |
| BsiHKAI | GWGCWC | 1 cut(s) | 21 |
| BsiSI | CCGG | 1 cut(s) | 26 |
| Bsp1286I | GDGCHC | 1 cut(s) | 21 |
| Bsp13I | TCCGGA | 1 cut(s) | 25 |
| Bsp143I | GATC | 2 cut(s) | 111, 123 |
| BspCNI | CTCAG | 1 cut(s) | 166 |
| BspEI | TCCGGA | 1 cut(s) | 25 |
| BspHI | TCATGA | 1 cut(s) | 239 |
| BspPI | GGATC | 1 cut(s) | 106 |
| BssMI | GATC | 2 cut(s) | 111, 123 |
| BssSI | CACGAG | 1 cut(s) | 87 |
| Bst2BI | CACGAG | 1 cut(s) | 87 |
| BstDEI | CTNAG | 1 cut(s) | 174 |
| BstKTI | GATC | 2 cut(s) | 114, 126 |
| BstMBI | GATC | 2 cut(s) | 111, 123 |
| BstX2I | RGATCY | 1 cut(s) | 111 |
| BstYI | RGATCY | 1 cut(s) | 111 |
| CciI | TCATGA | 1 cut(s) | 239 |
| CviAII | CATG | 1 cut(s) | 240 |
| CviJI | RGCY | 1 cut(s) | 19 |
| CviKI_1 | RGCY | 1 cut(s) | 19 |
| DdeI | CTNAG | 1 cut(s) | 174 |
| DpnI | GATC | 2 cut(s) | 113, 125 |
| DpnII | GATC | 2 cut(s) | 111, 123 |
| Ecl136II | GAGCTC | 1 cut(s) | 19 |
| Eco24I | GRGCYC | 1 cut(s) | 21 |
| Eco53kI | GAGCTC | 1 cut(s) | 19 |
| Eco57I | CTGAAG | 1 cut(s) | 137 |
| EcoICRI | GAGCTC | 1 cut(s) | 19 |
| EcoT38I | GRGCYC | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 243 |
| FaiI | YATR | 3 cut(s) | 140, 204, 241 |
| FatI | CATG | 1 cut(s) | 239 |
| FbaI | TGATCA | 1 cut(s) | 123 |
| FriOI | GRGCYC | 1 cut(s) | 21 |
| HapII | CCGG | 1 cut(s) | 26 |
| Hin1II | CATG | 1 cut(s) | 243 |
| HinfI | GANTC | 2 cut(s) | 59, 236 |
| HpaII | CCGG | 1 cut(s) | 26 |
| HphI | GGTGA | 1 cut(s) | 133 |
| Hpy166II | GTNNAC | 1 cut(s) | 58 |
| Hpy188I | TCNGA | 1 cut(s) | 64 |
| Hpy188III | TCNNGA | 5 cut(s) | 26, 89, 115, 127, 240 |
| Hpy8I | GTNNAC | 1 cut(s) | 58 |
| HpyAV | CCTTC | 1 cut(s) | 112 |
| HpyCH4V | TGCA | 1 cut(s) | 150 |
| HpyF3I | CTNAG | 1 cut(s) | 174 |
| Hsp92II | CATG | 1 cut(s) | 243 |
| Kpn2I | TCCGGA | 1 cut(s) | 25 |
| Ksp22I | TGATCA | 1 cut(s) | 123 |
| Kzo9I | GATC | 2 cut(s) | 111, 123 |
| LmnI | GCTCC | 1 cut(s) | 16 |
| LpnPI | CCDG | 3 cut(s) | 39, 112, 128 |
| LweI | GCATC | 1 cut(s) | 84 |
| MalI | GATC | 2 cut(s) | 113, 125 |
| MboI | GATC | 2 cut(s) | 111, 123 |
| MboII | GAAGA | 1 cut(s) | 142 |
| MflI | RGATCY | 1 cut(s) | 111 |
| MhlI | GDGCHC | 1 cut(s) | 21 |
| MlyI | GAGTC | 1 cut(s) | 53 |
| MnlI | CCTC | 3 cut(s) | 7, 178, 199 |
| MroI | TCCGGA | 1 cut(s) | 25 |
| MslI | CAYNNNNRTG | 1 cut(s) | 155 |
| MspI | CCGG | 1 cut(s) | 26 |
| NdeII | GATC | 2 cut(s) | 111, 123 |
| NlaIII | CATG | 1 cut(s) | 243 |
| PagI | TCATGA | 1 cut(s) | 239 |
| PfeI | GAWTC | 1 cut(s) | 236 |
| PleI | GAGTC | 1 cut(s) | 53 |
| PpsI | GAGTC | 1 cut(s) | 53 |
| Psp124BI | GAGCTC | 1 cut(s) | 21 |
| PsuI | RGATCY | 1 cut(s) | 111 |
| RseI | CAYNNNNRTG | 1 cut(s) | 155 |
| SacI | GAGCTC | 1 cut(s) | 21 |
| Sau3AI | GATC | 2 cut(s) | 111, 123 |
| SchI | GAGTC | 1 cut(s) | 53 |
| SduI | GDGCHC | 1 cut(s) | 21 |
| SetI | ASST | 3 cut(s) | 21, 123, 138 |
| SfaNI | GCATC | 1 cut(s) | 84 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 155 |
| SstI | GAGCTC | 1 cut(s) | 21 |
| TfiI | GAWTC | 1 cut(s) | 236 |
| TspDTI | ATGAA | 3 cut(s) | 155, 228, 234 |