Rroxscaffold_4G00280480

Heat shock protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
3036415 .. 3039619
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00280480.1

Sequence Viewer

Length: 2112 bp
ATGGCGGATGTTAAGATGGCTGATGCTGAGACGTTTGCATTCCAGGCCGAGATCAACCAGCTTCTGAGCTTGATCATCAATACGTTCTACAGCAACAAGGAGATTTTCCTTCGCGAGCTCATCAGCAATTCATCTGATGCTTTGGACAAGATTAGATTCGAGAGTCTTACGGATAAGAGCAAGCTGGATGCTCAGCCGGAGCTGTTCATCAGGATTGTTCCGGATAAGACCAACAATACTCTCTCCATTATTGATAGCGGGATCGGCATGACCAAAGCAGATTTGGTGAACAACTTGGGCACAATTGCAAGGTCTGGAACCAAGGAGTTTATGGAAGCTTTGGCTTCTGGAGTGTCTGATGTGAGCATGATTGGACAGTTTGGTGTTGGTTTCTATTCGGCATATCTTGTTGCGGAGAAGGTCATTGTGACTACAAAGCACAATGACGATGAGCAATACGTTTGGGAGTCTCAGGCTGGTGGTTCATTCACTGTGACAAGGGATGTCAATGGTGAGCAGCTTGGCAGGGGAACAAAGATTACTCTTTTCCTCAAGGAGGACCAGTTGGAATACTTAGAGGAGAGGAGGATCAAAGACCTTGTGAAGAAGCATTCCGAATTTATCAGCTATCCCATCTACTTGTGGACTGAGAAGACAACTGAAAAGGAGATCAGCGATGATGAAGAGGACGAACCCAAGAAGGAAGAGGAAGGAGATATTGAGGAAGTTGATGAGGACAAGGAGAAAGAAGGGAAGAAGAAGAAGAAGATCAAGGAAGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAACCAATCTGGCTGCGCAAGCCTGAGGAAATCACCAAGGATGAATATGCCTCGTTCTACAAGAGCTTGACCAATGATTGGGAGGAACACCTTGCTGTGAAGCACTTCTCTGTGGAAGGACAGCTTGAATTCAAAGCCATCCTCTTTGTTCCAAAGAGGGCTCCTTTCGACCTGTTTGATACCAGGAAGAAGATGAACAACATTAAGCTATATGTGAGGAGGGTGTTTATTATGGACAACTGTGAGGAGCTCATTCCAGAGTATCTTGGATTTGTTAAGGGTGTTGTGGACTCTGACGACTTGCCACTCAACATTTCTCGGGAGATGCTTCAACAGAACAAGATTTTGAAGGTGATTAGGAAGAACCTTGTGAAGAAGTGCATTGAGATGTTCAATGAGATTGCTGAAAACAAAGAGGATTACGCCAAGTTTTATGAGGCATTCTCGAAGAACTTGAAGTTGGGGATTCATGAGGACAGCCAGAATAGAGCCAAGTTGGCTGACCTTCTCCGATACCACTCCACCAAGAGCGGTGACGATCTCACAAGCTTGAAGGACTATGTAACCAGAATGAAGGAGGGCCAGAAGGACATCTACTACATTACTGGTGAGAGCAAGAAGGCGGTGGAAAACTCGCCATTCTTGGAACGCCTCAAGAAGAAGGGATATGAAGTACTTTTCATGGTGGATGCAATTGACGAATACGCTGTGGGACAATTGAAGGAGTATGATGGGAAGAAGCTTGTGTCTGCTACAAAGGAAGGTCTGAAGCTTGATGATGAATCTGAGGAAGAGAAGAAGAAGAAAGAGGAGAAGAAGAAGTCTTTTGAGAATCTTTGCAAGACAATCAAAGACATCTTGGGAGACAGGGTTGAGAAGGTGGTTGTGTCCGATAGAATTGTCGACTCACCTTGCTGCTTGGTCACTGGTGAATATGGCTGGAGTGCAAACATGGAGAGGATTATGAAGGCTCAGGCACTCAGGGACAACAGCATGGGTGCTTACATGTCCAGCAAGAAGACCATGGAAATCAACCCTGACAATGGCATCATGGAGGAGCTGAGGAAGAGAGCTGAAGCTGACAAAAATGACAAGTCCGTCAAGGACCTTGTGCTGCTGCTGTTTGAGACAGCTCTTTTGACATCTGGATTCAGCCTTGATGAGCCGCACACTTTTGCCTCGAGAATTCACAGGATGCTGAAGCTGGGGCTTAGCATCGAAGAAGATGAGACTGTTGAGGATGCGGACATGCCTGAGTTGGAGGATGCGGCTGAGGAGAGCAAAATGGAGGAGGTGGACTAA

Protein Analysis

703

Amino Acids

80.87

Weight (kDa)

5.02

Isoelectric Point (pI)

39.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c PF02518 34 - 187 2.7e-07 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3 PF13589 35 - 151 2.1e-08 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90 PF00183 190 - 698 2.8e-242 Hsp90 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000335)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52640
fragaria_vesca FvH4_2g04730 FvH4_2g04730 FvH4_2g04730 FvH4_2g13180 FvH4_7g30260 FvH4_7g30272
malus_domestica MD00G1081900.v1.1 MD01G1208700.v1.1 MD07G1279100.v1.1 MD07G1279200.v1.1 MD11G1152300.v1.1 MD14G1110500.v1.1 MD14G1110600.v1.1
prunus_persica Prupe.2G301300_v2.0.a1 Prupe.5G041100_v2.0.a1 Prupe.5G105600_v2.0.a1
pyrus_communis pycom01g21930 pycom07g25400 pycom09g11140 pycom14g10530
rosa_chinensis RchiOBHm_Chr1g0327061 RchiOBHm_Chr1g0378391 RchiOBHm_Chr1g0379711 RchiOBHm_Chr3g0488481 RchiOBHm_Chr4g0387881 RchiOBHm_Chr5g0021331 RchiOBHm_Chr5g0021341 RchiOBHm_Chr5g0021351 RchiOBHm_Chr6g0274441 RchiOBHm_Chr7g0196751 RchiOBHm_Chr7g0196771
rosa_laevigata RLG00000003992 RLG00000008392 RLG00000009018 RLG00000013542 RLG00000026364 RLG00000026365 RLG00000026438 RLG00000032605
rosa_multiflora Rmu_co8309643.1_g000001 Rmu_co8423093.1_g000001 Rmu_co8520529.1_g000002 Rmu_sc0000938.1_g000001 Rmu_sc0001083.1_g000031 Rmu_sc0001289.1_g000016 Rmu_sc0001777.1_g000013 Rmu_sc0003392.1_g000006 Rmu_sc0003600.1_g000010 Rmu_sc0004484.1_g000024 Rmu_sc0004847.1_g000017 Rmu_sc0009850.1_g000016 Rmu_sc0013411.1_g000009 Rmu_sc0024337.1_g000001 Rmu_sc0024338.1_g000001 Rmu_sc0029385.1_g000001 Rmu_sc0039495.1_g000001 Rmu_ssc0000259.1_g000042
rosa_roxburghii Rroxscaffold_1G00057180 Rroxscaffold_3G00258970 Rroxscaffold_3G00258980 Rroxscaffold_4G00280480 Rroxscaffold_7G00194220 Rroxscaffold_7G00197660
rosa_rugosa Rorug01G0408500 Rorug05G0066400 Rorug05G0066500 Rorug06G0081900 Rorug07G0036200
rosa_samantha Rh1AG083900 Rh1AG430000 Rh1AG438200 Rh1AG438300 Rh1BG387700 Rh1BG394700 Rh1BG394800 Rh1CG081800 Rh1CG401200 Rh1CG407700 Rh1CG407800 Rh1DG327400 Rh1DG418800 Rh1DG425100 Rh1DG425200 Rh2AG541400 Rh2CG384100 Rh2CG524100 Rh4DG107200 Rh5AG155400 Rh5AG155500 Rh5AG155600 Rh5BG155000 Rh5BG155100 Rh5CG168500 Rh5CG168600 Rh5CG168700 Rh5DG155600 Rh6AG198300 Rh6BG201600 Rh6BG491300 Rh6CG202400 Rh6DG192800 Rh7AG160000 Rh7AG160100 Rh7BG162200 Rh7CG168600 Rh7DG161300
rosa_wichuraiana Rw1G037630 Rw5G013860 Rw6G017240 Rw7G013990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1907
Acc16I TGCGCA 1 cut(s) 827
AccB7I CCANNNNNTGG 1 cut(s) 888
AccBSI CCGCTC 1 cut(s) 1341
AccI GTMKAC 1 cut(s) 1713
AccII CGCG 1 cut(s) 114
AccIII TCCGGA 1 cut(s) 220
AciI CCGC 8 cut(s) 5, 258, 413, 1341, 1433, 1976, 2054, 2078
AclWI GGATC 2 cut(s) 269, 596
AcsI RAATTY 3 cut(s) 617, 938, 1995
AcuI CTGAAG 3 cut(s) 1598, 1905, 2030
AfaI GTAC 1 cut(s) 1485
AfiI CCNNNNNNNGG 3 cut(s) 556, 888, 1853
AflIII ACRYGT 1 cut(s) 1815
AgsI TTSAA 8 cut(s) 938, 943, 1142, 1159, 1204, 1267, 1363, 1531
AjnI CCWGG 2 cut(s) 42, 992
AjuI GAANNNNNNNTTGG 2 cut(s) 1253, 1285
Alw21I GWGCWC 2 cut(s) 120, 1062
Alw26I GTCTC 5 cut(s) 23, 474, 1668, 1931, 2033
AlwI GGATC 2 cut(s) 269, 596
AlwNI CAGNNNCTG 1 cut(s) 64
Ama87I CYCGRG 2 cut(s) 1128, 1990
Aor13HI TCCGGA 1 cut(s) 220
AoxI GGCC 2 cut(s) 45, 1390
ApeKI GCWGC 5 cut(s) 517, 823, 1725, 1924, 1927
ApoI RAATTY 3 cut(s) 617, 938, 1995
ArsI GACNNNNNNTTYG 2 cut(s) 1930, 1962
Asp700I GAANNNNTTC 1 cut(s) 914
AspLEI GCGC 1 cut(s) 828
AspS9I GGNCC 3 cut(s) 559, 1390, 1915
AsuHPI GGTGA 8 cut(s) 298, 524, 835, 1174, 1355, 1430, 1710, 1751
AvaI CYCGRG 2 cut(s) 1128, 1990
AvaII GGWCC 2 cut(s) 559, 1915
AxyI CCTNAGG 1 cut(s) 834
BaeGI GKGCMC 1 cut(s) 302
BanII GRGCYC 3 cut(s) 120, 973, 1062
BarI GAAGNNNNNNTAC 2 cut(s) 1388, 1420
BbsI GAAGAC 2 cut(s) 659, 1835
Bbv12I GWGCWC 2 cut(s) 120, 1062
BbvCI CCTCAGC 2 cut(s) 1871, 2082
BbvI GCAGC 5 cut(s) 529, 810, 1712, 1911, 1914
BccI CCATC 4 cut(s) 10, 641, 956, 1535
BciT130I CCWGG 2 cut(s) 44, 994
BclI TGATCA 1 cut(s) 72
BcoDI GTCTC 5 cut(s) 23, 474, 1668, 1931, 2033
BfmI CTRYAG 1 cut(s) 88
BglI GCCNNNNNGGC 1 cut(s) 1307
BisI GCNGC 7 cut(s) 518, 824, 1726, 1925, 1928, 1976, 2079
BlpI GCTNAGC 2 cut(s) 192, 2021
BlsI GCNGC 7 cut(s) 519, 825, 1727, 1926, 1929, 1977, 2080
BmcAI AGTACT 1 cut(s) 1485
Bme1390I CCNGG 2 cut(s) 44, 994
Bme18I GGWCC 2 cut(s) 559, 1915
BmeT110I CYCGRG 2 cut(s) 1128, 1990
BmgT120I GGNCC 3 cut(s) 559, 1390, 1915
BmiI GGNNCC 2 cut(s) 319, 972
BmrFI CCNGG 2 cut(s) 44, 994
BpiI GAAGAC 2 cut(s) 659, 1835
BplI GAGNNNNNCTC 2 cut(s) 1238, 1270
BpmI CTGGAG 2 cut(s) 369, 1771
Bpu10I CCTNAGC 3 cut(s) 1782, 1871, 2082
Bpu1102I GCTNAGC 2 cut(s) 192, 2021
BpuEI CTTGAG 2 cut(s) 536, 1448
BsaJI CCNNGG 3 cut(s) 321, 846, 1833
BsaWI WCCGGW 1 cut(s) 220
BsaXI ACNNNNNCTCC 4 cut(s) 548, 578, 1665, 1695
Bsc4I CCNNNNNNNGG 3 cut(s) 556, 888, 1853
Bse1I ACTGG 3 cut(s) 562, 1420, 1741
Bse21I CCTNAGG 1 cut(s) 834
BseAI TCCGGA 1 cut(s) 220
BseBI CCWGG 2 cut(s) 44, 994
BseDI CCNNGG 3 cut(s) 321, 846, 1833
BseGI GGATG 9 cut(s) 13, 193, 508, 856, 948, 1504, 2010, 2056, 2080
BseLI CCNNNNNNNGG 3 cut(s) 556, 888, 1853
BseNI ACTGG 3 cut(s) 562, 1420, 1741
BseRI GAGGAG 7 cut(s) 593, 598, 1042, 1070, 1634, 1880, 2099
BseSI GKGCMC 1 cut(s) 302
BseXI GCAGC 5 cut(s) 529, 810, 1712, 1911, 1914
BseYI CCCAGC 1 cut(s) 2014
Bsh1236I CGCG 1 cut(s) 114
BshFI GGCC 2 cut(s) 47, 1392
BsiHKAI GWGCWC 2 cut(s) 120, 1062
BsiHKCI CYCGRG 2 cut(s) 1128, 1990
BsiSI CCGG 2 cut(s) 197, 221
BslFI GGGAC 2 cut(s) 1536, 1808
BslI CCNNNNNNNGG 3 cut(s) 556, 888, 1853
BsmAI GTCTC 5 cut(s) 23, 474, 1668, 1931, 2033
BsmBI CGTCTC 1 cut(s) 23
BsmFI GGGAC 2 cut(s) 1536, 1808
BsmI GAATGC 3 cut(s) 38, 610, 1250
BsnI GGCC 2 cut(s) 47, 1392
BsoBI CYCGRG 2 cut(s) 1128, 1990
Bsp1286I GDGCHC 4 cut(s) 120, 302, 973, 1062
Bsp13I TCCGGA 1 cut(s) 220
Bsp143I GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
Bsp1720I GCTNAGC 2 cut(s) 192, 2021
Bsp19I CCATGG 1 cut(s) 1833
Bsp68I TCGCGA 1 cut(s) 114
BspACI CCGC 8 cut(s) 5, 258, 413, 1341, 1433, 1976, 2054, 2078
BspANI GGCC 2 cut(s) 47, 1392
BspEI TCCGGA 1 cut(s) 220
BspFNI CGCG 1 cut(s) 114
BspHI TCATGA 2 cut(s) 784, 1279
BspLI GGNNCC 2 cut(s) 319, 972
BspPI GGATC 2 cut(s) 269, 596
BsrBI CCGCTC 1 cut(s) 1341
BsrI ACTGG 3 cut(s) 562, 1420, 1741
BssECI CCNNGG 3 cut(s) 321, 846, 1833
BssMI GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
BssT1I CCWWGG 3 cut(s) 321, 846, 1833
Bst2UI CCWGG 2 cut(s) 44, 994
Bst4CI ACNGT 4 cut(s) 378, 493, 1052, 2044
Bst6I CTCTTC 4 cut(s) 678, 699, 1596, 1871
BstC8I GCNNGC 3 cut(s) 116, 182, 830
BstDSI CCRYGG 1 cut(s) 1833
BstENI CCTNNNNNAGG 1 cut(s) 554
BstF5I GGATG 9 cut(s) 13, 193, 508, 856, 948, 1504, 2010, 2056, 2080
BstFNI CGCG 1 cut(s) 114
BstHHI GCGC 1 cut(s) 828
BstKTI GATC 7 cut(s) 54, 75, 264, 591, 672, 771, 1351
BstMAI GTCTC 5 cut(s) 23, 474, 1668, 1931, 2033
BstMBI GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
BstMWI GCNNNNNNNGC 4 cut(s) 44, 264, 829, 1307
BstNI CCWGG 2 cut(s) 44, 994
BstNSI RCATGY 2 cut(s) 1819, 2062
BstSCI CCNGG 2 cut(s) 42, 992
BstSFI CTRYAG 1 cut(s) 88
BstSLI GKGCMC 1 cut(s) 302
BstUI CGCG 1 cut(s) 114
BstV1I GCAGC 5 cut(s) 529, 810, 1712, 1911, 1914
BstV2I GAAGAC 2 cut(s) 659, 1835
Bsu36I CCTNAGG 1 cut(s) 834
BsuRI GGCC 2 cut(s) 47, 1392
BtgI CCRYGG 1 cut(s) 1833
BtgZI GCGATG 1 cut(s) 690
BtsCI GGATG 9 cut(s) 13, 193, 508, 856, 948, 1504, 2010, 2056, 2080
BtsIMutI CAGTG 2 cut(s) 489, 1734
BtuMI TCGCGA 1 cut(s) 114
Cac8I GCNNGC 3 cut(s) 116, 182, 830
CaiI CAGNNNCTG 1 cut(s) 64
CciI TCATGA 2 cut(s) 784, 1279
CfoI GCGC 1 cut(s) 828
Cfr13I GGNCC 3 cut(s) 559, 1390, 1915
Csp6I GTAC 1 cut(s) 1484
CviQI GTAC 1 cut(s) 1484
DpnI GATC 7 cut(s) 53, 74, 263, 590, 671, 770, 1350
DpnII GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
DrdI GACNNNNNNGTC 1 cut(s) 1907
DseDI GACNNNNNNGTC 1 cut(s) 1907
Eam1104I CTCTTC 4 cut(s) 678, 699, 1596, 1871
EarI CTCTTC 4 cut(s) 678, 699, 1596, 1871
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 118, 1060
Eco130I CCWWGG 3 cut(s) 321, 846, 1833
Eco24I GRGCYC 3 cut(s) 120, 973, 1062
Eco47I GGWCC 2 cut(s) 559, 1915
Eco53kI GAGCTC 2 cut(s) 118, 1060
Eco57I CTGAAG 3 cut(s) 1598, 1905, 2030
Eco81I CCTNAGG 1 cut(s) 834
Eco88I CYCGRG 2 cut(s) 1128, 1990
EcoICRI GAGCTC 2 cut(s) 118, 1060
EcoNI CCTNNNNNAGG 1 cut(s) 554
EcoO109I RGGNCCY 1 cut(s) 1915
EcoRI GAATTC 2 cut(s) 938, 1995
EcoRII CCWGG 2 cut(s) 42, 992
EcoT14I CCWWGG 3 cut(s) 321, 846, 1833
EcoT38I GRGCYC 3 cut(s) 120, 973, 1062
ErhI CCWWGG 3 cut(s) 321, 846, 1833
Esp3I CGTCTC 1 cut(s) 23
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 2 cut(s) 1536, 1808
FauI CCCGC 1 cut(s) 251
FbaI TGATCA 1 cut(s) 72
FblI GTMKAC 1 cut(s) 1713
Fnu4HI GCNGC 7 cut(s) 518, 824, 1726, 1925, 1928, 1976, 2079
FokI GGATG 9 cut(s) 20, 200, 515, 863, 935, 1511, 2017, 2063, 2087
FriOI GRGCYC 3 cut(s) 120, 973, 1062
Fsp4HI GCNGC 7 cut(s) 518, 824, 1726, 1925, 1928, 1976, 2079
FspI TGCGCA 1 cut(s) 827
GlaI GCGC 1 cut(s) 827
GluI GCNGC 7 cut(s) 518, 824, 1726, 1925, 1928, 1976, 2079
GsaI CCCAGC 1 cut(s) 2018
GsuI CTGGAG 2 cut(s) 369, 1771
HaeIII GGCC 2 cut(s) 47, 1392
HapII CCGG 2 cut(s) 197, 221
HhaI GCGC 1 cut(s) 828
Hin6I GCGC 1 cut(s) 826
HinP1I GCGC 1 cut(s) 826
HincII GTYRAC 1 cut(s) 1714
HindII GTYRAC 1 cut(s) 1714
HindIII AAGCTT 4 cut(s) 336, 1357, 1550, 1580
HinfI GANTC 9 cut(s) 156, 163, 467, 1100, 1276, 1592, 1642, 1715, 1959
HpaII CCGG 2 cut(s) 197, 221
HphI GGTGA 8 cut(s) 298, 524, 835, 1174, 1355, 1430, 1710, 1751
Hpy166II GTNNAC 5 cut(s) 289, 645, 1099, 1714, 2107
Hpy188I TCNGA 9 cut(s) 66, 136, 358, 616, 1105, 1322, 1578, 1597, 1702
Hpy8I GTNNAC 5 cut(s) 289, 645, 1099, 1714, 2107
HpyCH4III ACNGT 4 cut(s) 378, 493, 1052, 2044
HpyCH4IV ACGT 3 cut(s) 32, 83, 459
HpyCH4V TGCA 6 cut(s) 38, 308, 1191, 1502, 1650, 1757
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 264, 829, 1307
HpySE526I ACGT 3 cut(s) 32, 83, 459
HspAI GCGC 1 cut(s) 826
Kpn2I TCCGGA 1 cut(s) 220
Ksp22I TGATCA 1 cut(s) 72
Kzo9I GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
LmnI GCTCC 4 cut(s) 199, 976, 1057, 1867
Lsp1109I GCAGC 5 cut(s) 529, 810, 1712, 1911, 1914
MaeII ACGT 3 cut(s) 32, 83, 459
MaeIII GTNAC 5 cut(s) 427, 493, 1343, 1372, 1732
MalI GATC 7 cut(s) 53, 74, 263, 590, 671, 770, 1350
MbiI CCGCTC 1 cut(s) 1341
MboI GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
MfeI CAATTG 3 cut(s) 303, 1503, 1526
MhlI GDGCHC 4 cut(s) 120, 302, 973, 1062
MluCI AATT 8 cut(s) 127, 303, 617, 938, 1503, 1526, 1707, 1995
MlyI GAGTC 4 cut(s) 172, 476, 1094, 1709
MmeI TCCRAC 2 cut(s) 546, 2049
MroI TCCGGA 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 914
MseI TTAA 3 cut(s) 12, 1014, 1086
MslI CAYNNNNRTG 1 cut(s) 1196
MspI CCGG 2 cut(s) 197, 221
MspR9I CCNGG 2 cut(s) 44, 994
MunI CAATTG 3 cut(s) 303, 1503, 1526
Mva1269I GAATGC 3 cut(s) 38, 610, 1250
MvaI CCWGG 2 cut(s) 44, 994
MvnI CGCG 1 cut(s) 114
MwoI GCNNNNNNNGC 4 cut(s) 44, 264, 829, 1307
NcoI CCATGG 1 cut(s) 1833
NdeII GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
NlaIV GGNNCC 2 cut(s) 319, 972
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 4 cut(s) 427, 493, 1343, 1732
NruI TCGCGA 1 cut(s) 114
NsbI TGCGCA 1 cut(s) 827
NspI RCATGY 2 cut(s) 1819, 2062
PaeR7I CTCGAG 1 cut(s) 1990
PagI TCATGA 2 cut(s) 784, 1279
PciI ACATGT 1 cut(s) 1815
PctI GAATGC 3 cut(s) 38, 610, 1250
PdmI GAANNNNTTC 1 cut(s) 914
PfeI GAWTC 5 cut(s) 156, 1276, 1592, 1642, 1959
PflMI CCANNNNNTGG 1 cut(s) 888
PkrI GCNGC 7 cut(s) 519, 825, 1727, 1926, 1929, 1977, 2080
PleI GAGTC 4 cut(s) 171, 475, 1094, 1709
PpsI GAGTC 4 cut(s) 171, 475, 1094, 1709
PpuMI RGGWCCY 1 cut(s) 1915
PscI ACATGT 1 cut(s) 1815
Psp124BI GAGCTC 2 cut(s) 120, 1062
Psp5II RGGWCCY 1 cut(s) 1915
Psp6I CCWGG 2 cut(s) 42, 992
PspFI CCCAGC 1 cut(s) 2014
PspGI CCWGG 2 cut(s) 42, 992
PspN4I GGNNCC 2 cut(s) 319, 972
PspPI GGNCC 3 cut(s) 559, 1390, 1915
PspPPI RGGWCCY 1 cut(s) 1915
PsrI GAACNNNNNNTAC 2 cut(s) 523, 555
PstNI CAGNNNCTG 1 cut(s) 64
RruI TCGCGA 1 cut(s) 114
RsaI GTAC 1 cut(s) 1485
RsaNI GTAC 1 cut(s) 1484
RseI CAYNNNNRTG 1 cut(s) 1196
SacI GAGCTC 2 cut(s) 120, 1062
SalI GTCGAC 1 cut(s) 1712
SaqAI TTAA 3 cut(s) 12, 1014, 1086
SatI GCNGC 7 cut(s) 518, 824, 1726, 1925, 1928, 1976, 2079
Sau3AI GATC 7 cut(s) 51, 72, 261, 588, 669, 768, 1348
Sau96I GGNCC 3 cut(s) 559, 1390, 1915
ScaI AGTACT 1 cut(s) 1485
SchI GAGTC 4 cut(s) 172, 476, 1094, 1709
ScrFI CCNGG 2 cut(s) 44, 994
SduI GDGCHC 4 cut(s) 120, 302, 973, 1062
SfcI CTRYAG 1 cut(s) 88
Sfr274I CTCGAG 1 cut(s) 1990
SinI GGWCC 2 cut(s) 559, 1915
SlaI CTCGAG 1 cut(s) 1990
SmiMI CAYNNNNRTG 1 cut(s) 1196
SmlI CTYRAG 3 cut(s) 551, 1463, 1990
SmoI CTYRAG 3 cut(s) 551, 1463, 1990
Sse9I AATT 8 cut(s) 127, 303, 617, 938, 1503, 1526, 1707, 1995
SsiI CCGC 8 cut(s) 5, 258, 413, 1341, 1433, 1976, 2054, 2078
SstI GAGCTC 2 cut(s) 120, 1062
StyD4I CCNGG 2 cut(s) 42, 992
StyI CCWWGG 3 cut(s) 321, 846, 1833
TaaI ACNGT 4 cut(s) 378, 493, 1052, 2044
TaiI ACGT 3 cut(s) 35, 86, 462
TaqI TCGA 6 cut(s) 159, 978, 1256, 1713, 1991, 2028
TasI AATT 8 cut(s) 127, 303, 617, 938, 1503, 1526, 1707, 1995
TatI WGTACW 1 cut(s) 1483
TauI GCSGC 2 cut(s) 1978, 2081
TfiI GAWTC 5 cut(s) 156, 1276, 1592, 1642, 1959
Tru1I TTAA 3 cut(s) 12, 1014, 1086
Tru9I TTAA 3 cut(s) 12, 1014, 1086
TscAI CASTG 2 cut(s) 496, 1741
TseFI GTSAC 4 cut(s) 427, 493, 1343, 1732
TseI GCWGC 5 cut(s) 517, 823, 1725, 1924, 1927
Tsp45I GTSAC 4 cut(s) 427, 493, 1343, 1732
TspGWI ACGGA 2 cut(s) 185, 1897
TspRI CASTG 2 cut(s) 496, 1741
Van91I CCANNNNNTGG 1 cut(s) 888
VpaK11BI GGWCC 2 cut(s) 559, 1915
XagI CCTNNNNNAGG 1 cut(s) 554
XapI RAATTY 3 cut(s) 617, 938, 1995
XceI RCATGY 2 cut(s) 1819, 2062
XcmI CCANNNNNNNNNTGG 2 cut(s) 280, 328
XhoI CTCGAG 1 cut(s) 1990
XmiI GTMKAC 1 cut(s) 1713
XmnI GAANNNNTTC 1 cut(s) 914
ZrmI AGTACT 1 cut(s) 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.