Prupe.5G041100_v2.0.a1

Heat shock protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
4515036 .. 4516510
1475 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G041100.1

Sequence Viewer

Length: 168 bp
ATGAGATCAACCAGCTTCTGTTTAATCATCAACACCCTCCACAGTAACAGAGAGATCTTTCTCCATGAGCTCATCAGTAACGCCTCTGATGTTACTCAAACTTGTTGGCCAAGATTAGGTTTTACACAGAGAGGTAACACAACGAAGCAAGCAGCATTTACAATGTAA

Protein Analysis

56

Amino Acids

6.29

Weight (kDa)

8.94

Isoelectric Point (pI)

20.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000335)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52640
fragaria_vesca FvH4_2g04730 FvH4_2g04730 FvH4_2g04730 FvH4_2g13180 FvH4_7g30260 FvH4_7g30272
malus_domestica MD00G1081900.v1.1 MD01G1208700.v1.1 MD07G1279100.v1.1 MD07G1279200.v1.1 MD11G1152300.v1.1 MD14G1110500.v1.1 MD14G1110600.v1.1
prunus_persica Prupe.2G301300_v2.0.a1 Prupe.5G041100_v2.0.a1 Prupe.5G105600_v2.0.a1
pyrus_communis pycom01g21930 pycom07g25400 pycom09g11140 pycom14g10530
rosa_chinensis RchiOBHm_Chr1g0327061 RchiOBHm_Chr1g0378391 RchiOBHm_Chr1g0379711 RchiOBHm_Chr3g0488481 RchiOBHm_Chr4g0387881 RchiOBHm_Chr5g0021331 RchiOBHm_Chr5g0021341 RchiOBHm_Chr5g0021351 RchiOBHm_Chr6g0274441 RchiOBHm_Chr7g0196751 RchiOBHm_Chr7g0196771
rosa_laevigata RLG00000003992 RLG00000008392 RLG00000009018 RLG00000013542 RLG00000026364 RLG00000026365 RLG00000026438 RLG00000032605
rosa_multiflora Rmu_co8309643.1_g000001 Rmu_co8423093.1_g000001 Rmu_co8520529.1_g000002 Rmu_sc0000938.1_g000001 Rmu_sc0001083.1_g000031 Rmu_sc0001289.1_g000016 Rmu_sc0001777.1_g000013 Rmu_sc0003392.1_g000006 Rmu_sc0003600.1_g000010 Rmu_sc0004484.1_g000024 Rmu_sc0004847.1_g000017 Rmu_sc0009850.1_g000016 Rmu_sc0013411.1_g000009 Rmu_sc0024337.1_g000001 Rmu_sc0024338.1_g000001 Rmu_sc0029385.1_g000001 Rmu_sc0039495.1_g000001 Rmu_ssc0000259.1_g000042
rosa_roxburghii Rroxscaffold_1G00057180 Rroxscaffold_3G00258970 Rroxscaffold_3G00258980 Rroxscaffold_4G00280480 Rroxscaffold_7G00194220 Rroxscaffold_7G00197660
rosa_rugosa Rorug01G0408500 Rorug05G0066400 Rorug05G0066500 Rorug06G0081900 Rorug07G0036200
rosa_samantha Rh1AG083900 Rh1AG430000 Rh1AG438200 Rh1AG438300 Rh1BG387700 Rh1BG394700 Rh1BG394800 Rh1CG081800 Rh1CG401200 Rh1CG407700 Rh1CG407800 Rh1DG327400 Rh1DG418800 Rh1DG425100 Rh1DG425200 Rh2AG541400 Rh2CG384100 Rh2CG524100 Rh4DG107200 Rh5AG155400 Rh5AG155500 Rh5AG155600 Rh5BG155000 Rh5BG155100 Rh5CG168500 Rh5CG168600 Rh5CG168700 Rh5DG155600 Rh6AG198300 Rh6BG201600 Rh6BG491300 Rh6CG202400 Rh6DG192800 Rh7AG160000 Rh7AG160100 Rh7BG162200 Rh7CG168600 Rh7DG161300
rosa_wichuraiana Rw1G037630 Rw5G013860 Rw6G017240 Rw7G013990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 107
AfiI CCNNNNNNNGG 1 cut(s) 116
AluBI AGCT 2 cut(s) 15, 70
AluI AGCT 2 cut(s) 15, 70
Alw21I GWGCWC 1 cut(s) 72
AlwNI CAGNNNCTG 1 cut(s) 18
AoxI GGCC 1 cut(s) 107
ApeKI GCWGC 1 cut(s) 152
BalI TGGCCA 1 cut(s) 109
BanII GRGCYC 1 cut(s) 72
Bbv12I GWGCWC 1 cut(s) 72
BbvI GCAGC 1 cut(s) 164
BglII AGATCT 1 cut(s) 54
BisI GCNGC 1 cut(s) 153
BlsI GCNGC 1 cut(s) 154
Bsc4I CCNNNNNNNGG 1 cut(s) 116
BseLI CCNNNNNNNGG 1 cut(s) 116
BseXI GCAGC 1 cut(s) 164
BshFI GGCC 1 cut(s) 109
BsiHKAI GWGCWC 1 cut(s) 72
BslI CCNNNNNNNGG 1 cut(s) 116
BsnI GGCC 1 cut(s) 109
Bsp1286I GDGCHC 1 cut(s) 72
Bsp143I GATC 2 cut(s) 5, 54
BspANI GGCC 1 cut(s) 109
BssMI GATC 2 cut(s) 5, 54
Bst4CI ACNGT 1 cut(s) 44
BstC8I GCNNGC 1 cut(s) 150
BstKTI GATC 2 cut(s) 8, 57
BstMBI GATC 2 cut(s) 5, 54
BstV1I GCAGC 1 cut(s) 164
BstX2I RGATCY 1 cut(s) 54
BstYI RGATCY 1 cut(s) 54
BsuRI GGCC 1 cut(s) 109
Cac8I GCNNGC 1 cut(s) 150
CaiI CAGNNNCTG 1 cut(s) 18
CviAII CATG 1 cut(s) 65
CviJI RGCY 3 cut(s) 15, 70, 109
CviKI_1 RGCY 3 cut(s) 15, 70, 109
DpnI GATC 2 cut(s) 7, 56
DpnII GATC 2 cut(s) 5, 54
EaeI YGGCCR 1 cut(s) 107
Ecl136II GAGCTC 1 cut(s) 70
Eco24I GRGCYC 1 cut(s) 72
Eco53kI GAGCTC 1 cut(s) 70
EcoICRI GAGCTC 1 cut(s) 70
EcoT38I GRGCYC 1 cut(s) 72
FaeI CATG 1 cut(s) 68
FaiI YATR 1 cut(s) 66
FatI CATG 1 cut(s) 64
Fnu4HI GCNGC 1 cut(s) 153
FriOI GRGCYC 1 cut(s) 72
Fsp4HI GCNGC 1 cut(s) 153
GluI GCNGC 1 cut(s) 153
HaeIII GGCC 1 cut(s) 109
Hin1II CATG 1 cut(s) 68
Hpy188I TCNGA 1 cut(s) 88
HpyCH4III ACNGT 1 cut(s) 44
Hsp92II CATG 1 cut(s) 68
Kzo9I GATC 2 cut(s) 5, 54
LpnPI CCDG 1 cut(s) 25
Lsp1109I GCAGC 1 cut(s) 164
MaeIII GTNAC 4 cut(s) 44, 77, 91, 134
MalI GATC 2 cut(s) 7, 56
MboI GATC 2 cut(s) 5, 54
MflI RGATCY 1 cut(s) 54
MhlI GDGCHC 1 cut(s) 72
MlsI TGGCCA 1 cut(s) 109
MluNI TGGCCA 1 cut(s) 109
MnlI CCTC 3 cut(s) 47, 94, 125
Mox20I TGGCCA 1 cut(s) 109
MscI TGGCCA 1 cut(s) 109
MseI TTAA 1 cut(s) 23
Msp20I TGGCCA 1 cut(s) 109
NdeII GATC 2 cut(s) 5, 54
NlaIII CATG 1 cut(s) 68
PkrI GCNGC 1 cut(s) 154
Psp124BI GAGCTC 1 cut(s) 72
PstNI CAGNNNCTG 1 cut(s) 18
PsuI RGATCY 1 cut(s) 54
SacI GAGCTC 1 cut(s) 72
SaqAI TTAA 1 cut(s) 23
SatI GCNGC 1 cut(s) 153
Sau3AI GATC 2 cut(s) 5, 54
SduI GDGCHC 1 cut(s) 72
SetI ASST 4 cut(s) 17, 72, 121, 136
SgeI CNNG 5 cut(s) 24, 77, 114, 123, 161
SstI GAGCTC 1 cut(s) 72
TaaI ACNGT 1 cut(s) 44
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TseI GCWGC 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.