Heat shock protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 219 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2078 |
| AccB1I | GGYRCC | 1 cut(s) | 902 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1257 |
| AccBSI | CCGCTC | 3 cut(s) | 892, 1486, 1710 |
| AccI | GTMKAC | 1 cut(s) | 26 |
| AccII | CGCG | 1 cut(s) | 158 |
| AccIII | TCCGGA | 1 cut(s) | 195 |
| AciI | CCGC | 9 cut(s) | 158, 374, 890, 1484, 1690, 1710, 1802, 1929, 2161 |
| AclI | AACGTT | 1 cut(s) | 12 |
| AclWI | GGATC | 7 cut(s) | 477, 939, 968, 975, 1312, 2147, 2214 |
| AcoI | YGGCCR | 2 cut(s) | 1677, 2124 |
| AcsI | RAATTY | 6 cut(s) | 305, 327, 525, 701, 1307, 1630 |
| AcuI | CTGAAG | 1 cut(s) | 1751 |
| AcyI | GRCGYC | 1 cut(s) | 93 |
| AfaI | GTAC | 4 cut(s) | 676, 830, 1226, 1442 |
| AfeI | AGCGCT | 1 cut(s) | 1829 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 928, 1257, 2224 |
| AflIII | ACRYGT | 1 cut(s) | 2184 |
| AgeI | ACCGGT | 1 cut(s) | 1784 |
| AgsI | TTSAA | 6 cut(s) | 1312, 1528, 1573, 1636, 1834, 1900 |
| AjnI | CCWGG | 1 cut(s) | 411 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1622, 1654 |
| Alw21I | GWGCWC | 4 cut(s) | 283, 491, 1167, 2180 |
| Alw26I | GTCTC | 5 cut(s) | 392, 1058, 1949, 1955, 2037 |
| AlwI | GGATC | 7 cut(s) | 477, 939, 968, 975, 1312, 2147, 2214 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 433, 2158 |
| Ama87I | CYCGRG | 1 cut(s) | 1436 |
| Aor13HI | TCCGGA | 1 cut(s) | 195 |
| Aor51HI | AGCGCT | 1 cut(s) | 1829 |
| AoxI | GGCC | 5 cut(s) | 414, 771, 1297, 1677, 2124 |
| ApeKI | GCWGC | 5 cut(s) | 134, 1229, 1507, 2094, 2158 |
| ApoI | RAATTY | 6 cut(s) | 305, 327, 525, 701, 1307, 1630 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1872, 1904 |
| AsiGI | ACCGGT | 1 cut(s) | 1784 |
| AspLEI | GCGC | 3 cut(s) | 1830, 2152, 2158 |
| AspS9I | GGNCC | 2 cut(s) | 144, 1017 |
| AsuC2I | CCSGG | 1 cut(s) | 2218 |
| AsuHPI | GGTGA | 8 cut(s) | 673, 904, 1204, 1543, 1724, 1774, 1799, 2113 |
| AsuII | TTCGAA | 1 cut(s) | 303 |
| AvaI | CYCGRG | 1 cut(s) | 1436 |
| AvaII | GGWCC | 2 cut(s) | 144, 1017 |
| BaeGI | GKGCMC | 1 cut(s) | 905 |
| BanI | GGYRCC | 1 cut(s) | 902 |
| BanII | GRGCYC | 5 cut(s) | 209, 491, 1167, 1342, 2180 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 1217, 1249, 1757, 1789, 1829, 1861 |
| BauI | CACGAG | 4 cut(s) | 276, 1154, 1497, 1649 |
| BbsI | GAAGAC | 4 cut(s) | 1031, 1062, 1124, 2204 |
| Bbv12I | GWGCWC | 4 cut(s) | 283, 491, 1167, 2180 |
| BbvI | GCAGC | 5 cut(s) | 146, 1216, 1494, 2081, 2145 |
| BccI | CCATC | 4 cut(s) | 112, 255, 1193, 2197 |
| BceAI | ACGGC | 5 cut(s) | 80, 147, 1871, 1927, 2139 |
| BciT130I | CCWGG | 1 cut(s) | 413 |
| BclI | TGATCA | 2 cut(s) | 441, 1533 |
| BcnI | CCSGG | 1 cut(s) | 2218 |
| BcoDI | GTCTC | 5 cut(s) | 392, 1058, 1949, 1955, 2037 |
| BfaI | CTAG | 1 cut(s) | 1362 |
| BfmI | CTRYAG | 1 cut(s) | 457 |
| BfoI | RGCGCY | 2 cut(s) | 1831, 2159 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 413, 1676 |
| BisI | GCNGC | 6 cut(s) | 135, 1230, 1484, 1508, 2095, 2159 |
| BlpI | GCTNAGC | 1 cut(s) | 567 |
| BlsI | GCNGC | 6 cut(s) | 136, 1231, 1485, 1509, 2096, 2160 |
| Bme1390I | CCNGG | 2 cut(s) | 413, 2218 |
| Bme18I | GGWCC | 2 cut(s) | 144, 1017 |
| BmeT110I | CYCGRG | 1 cut(s) | 1436 |
| BmgT120I | GGNCC | 2 cut(s) | 144, 1017 |
| BmiI | GGNNCC | 9 cut(s) | 146, 200, 594, 694, 727, 856, 904, 1193, 1341 |
| BmrFI | CCNGG | 2 cut(s) | 413, 2218 |
| BmrI | ACTGGG | 1 cut(s) | 1267 |
| BmsI | GCATC | 6 cut(s) | 201, 375, 553, 1494, 1653, 1858 |
| BmuI | ACTGGG | 1 cut(s) | 1267 |
| BpiI | GAAGAC | 4 cut(s) | 1031, 1062, 1124, 2204 |
| Bpu10I | CCTNAGC | 1 cut(s) | 18 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 567 |
| Bpu14I | TTCGAA | 1 cut(s) | 303 |
| BpuEI | CTTGAG | 1 cut(s) | 908 |
| BpuMI | CCSGG | 1 cut(s) | 2218 |
| Bsa29I | ATCGAT | 2 cut(s) | 472, 2209 |
| BsaHI | GRCGYC | 1 cut(s) | 93 |
| BsaI | GGTCTC | 3 cut(s) | 392, 1058, 1949 |
| BsaJI | CCNNGG | 2 cut(s) | 1215, 1444 |
| BsaWI | WCCGGW | 3 cut(s) | 195, 1784, 2105 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 717, 747, 920, 950, 2034, 2064 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 928, 1257, 2224 |
| Bse118I | RCCGGY | 1 cut(s) | 1784 |
| Bse1I | ACTGG | 1 cut(s) | 1262 |
| Bse3DI | GCAATG | 1 cut(s) | 713 |
| BseAI | TCCGGA | 1 cut(s) | 195 |
| BseBI | CCWGG | 1 cut(s) | 413 |
| BseCI | ATCGAT | 2 cut(s) | 472, 2209 |
| BseDI | CCNNGG | 2 cut(s) | 1215, 1444 |
| BseGI | GGATG | 5 cut(s) | 192, 880, 1480, 1644, 1873 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 928, 1257, 2224 |
| BseMI | GCAATG | 1 cut(s) | 713 |
| BseMII | CTCAG | 8 cut(s) | 9, 244, 387, 425, 581, 978, 1302, 1575 |
| BseNI | ACTGG | 1 cut(s) | 1262 |
| BseRI | GAGGAG | 7 cut(s) | 218, 970, 1109, 1235, 1439, 1676, 2003 |
| BseSI | GKGCMC | 1 cut(s) | 905 |
| BseXI | GCAGC | 5 cut(s) | 146, 1216, 1494, 2081, 2145 |
| Bsh1236I | CGCG | 1 cut(s) | 158 |
| BshFI | GGCC | 5 cut(s) | 416, 773, 1299, 1679, 2126 |
| BshNI | GGYRCC | 1 cut(s) | 902 |
| BshTI | ACCGGT | 1 cut(s) | 1784 |
| BshVI | ATCGAT | 2 cut(s) | 472, 2209 |
| BsiHKAI | GWGCWC | 4 cut(s) | 283, 491, 1167, 2180 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1436 |
| BsiSI | CCGG | 6 cut(s) | 196, 572, 723, 1785, 2106, 2218 |
| BslFI | GGGAC | 2 cut(s) | 219, 2177 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 928, 1257, 2224 |
| BsmAI | GTCTC | 5 cut(s) | 392, 1058, 1949, 1955, 2037 |
| BsmFI | GGGAC | 2 cut(s) | 219, 2177 |
| BsnI | GGCC | 5 cut(s) | 416, 773, 1299, 1679, 2126 |
| Bso31I | GGTCTC | 3 cut(s) | 392, 1058, 1949 |
| BsoBI | CYCGRG | 1 cut(s) | 1436 |
| Bsp119I | TTCGAA | 1 cut(s) | 303 |
| Bsp1286I | GDGCHC | 7 cut(s) | 209, 283, 491, 905, 1167, 1342, 2180 |
| Bsp13I | TCCGGA | 1 cut(s) | 195 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 567 |
| BspACI | CCGC | 9 cut(s) | 158, 374, 890, 1484, 1690, 1710, 1802, 1929, 2161 |
| BspANI | GGCC | 5 cut(s) | 416, 773, 1299, 1679, 2126 |
| BspCNI | CTCAG | 8 cut(s) | 10, 243, 388, 426, 580, 979, 1301, 1576 |
| BspDI | ATCGAT | 2 cut(s) | 472, 2209 |
| BspEI | TCCGGA | 1 cut(s) | 195 |
| BspFNI | CGCG | 1 cut(s) | 158 |
| BspHI | TCATGA | 1 cut(s) | 2142 |
| BspLI | GGNNCC | 9 cut(s) | 146, 200, 594, 694, 727, 856, 904, 1193, 1341 |
| BspPI | GGATC | 7 cut(s) | 477, 939, 968, 975, 1312, 2147, 2214 |
| BspT104I | TTCGAA | 1 cut(s) | 303 |
| BspT107I | GGYRCC | 1 cut(s) | 902 |
| BspTNI | GGTCTC | 3 cut(s) | 392, 1058, 1949 |
| BsrBI | CCGCTC | 3 cut(s) | 892, 1486, 1710 |
| BsrDI | GCAATG | 1 cut(s) | 713 |
| BsrFI | RCCGGY | 1 cut(s) | 1784 |
| BsrI | ACTGG | 1 cut(s) | 1262 |
| BssAI | RCCGGY | 1 cut(s) | 1784 |
| BssECI | CCNNGG | 2 cut(s) | 1215, 1444 |
| BssNI | GRCGYC | 1 cut(s) | 93 |
| BssSI | CACGAG | 4 cut(s) | 276, 1154, 1497, 1649 |
| BssT1I | CCWWGG | 1 cut(s) | 1215 |
| Bst2BI | CACGAG | 4 cut(s) | 276, 1154, 1497, 1649 |
| Bst2UI | CCWGG | 1 cut(s) | 413 |
| Bst4CI | ACNGT | 2 cut(s) | 632, 865 |
| Bst6I | CTCTTC | 8 cut(s) | 216, 923, 945, 1056, 1071, 1328, 1965, 1988 |
| BstACI | GRCGYC | 1 cut(s) | 93 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2158 |
| BstBI | TTCGAA | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 5 cut(s) | 557, 720, 846, 1301, 2154 |
| BstDEI | CTNAG | 8 cut(s) | 18, 230, 396, 434, 567, 987, 1288, 1584 |
| BstEII | GGTNACC | 1 cut(s) | 2101 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 926 |
| BstF5I | GGATG | 5 cut(s) | 192, 880, 1480, 1644, 1873 |
| BstFNI | CGCG | 1 cut(s) | 158 |
| BstH2I | RGCGCY | 2 cut(s) | 1831, 2159 |
| BstHHI | GCGC | 3 cut(s) | 1830, 2152, 2158 |
| BstMAI | GTCTC | 5 cut(s) | 392, 1058, 1949, 1955, 2037 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 413, 719, 1198, 1676, 2158 |
| BstNI | CCWGG | 1 cut(s) | 413 |
| BstNSI | RCATGY | 1 cut(s) | 2188 |
| BstPI | GGTNACC | 1 cut(s) | 2101 |
| BstSCI | CCNGG | 2 cut(s) | 411, 2216 |
| BstSFI | CTRYAG | 1 cut(s) | 457 |
| BstSLI | GKGCMC | 1 cut(s) | 905 |
| BstUI | CGCG | 1 cut(s) | 158 |
| BstV1I | GCAGC | 5 cut(s) | 146, 1216, 1494, 2081, 2145 |
| BstV2I | GAAGAC | 4 cut(s) | 1031, 1062, 1124, 2204 |
| BstX2I | RGATCY | 1 cut(s) | 967 |
| BstYI | RGATCY | 1 cut(s) | 967 |
| Bsu15I | ATCGAT | 2 cut(s) | 472, 2209 |
| BsuRI | GGCC | 5 cut(s) | 416, 773, 1299, 1679, 2126 |
| BsuTUI | ATCGAT | 2 cut(s) | 472, 2209 |
| BtsCI | GGATG | 5 cut(s) | 192, 880, 1480, 1644, 1873 |
| BtsIMutI | CAGTG | 4 cut(s) | 123, 637, 861, 1051 |
| Cac8I | GCNNGC | 5 cut(s) | 557, 720, 846, 1301, 2154 |
| CaiI | CAGNNNCTG | 2 cut(s) | 433, 2158 |
| CciI | TCATGA | 1 cut(s) | 2142 |
| CfoI | GCGC | 3 cut(s) | 1830, 2152, 2158 |
| Cfr10I | RCCGGY | 1 cut(s) | 1784 |
| Cfr13I | GGNCC | 2 cut(s) | 144, 1017 |
| ClaI | ATCGAT | 2 cut(s) | 472, 2209 |
| CseI | GACGC | 2 cut(s) | 101, 401 |
| Csp6I | GTAC | 4 cut(s) | 675, 829, 1225, 1441 |
| CspAI | ACCGGT | 1 cut(s) | 1784 |
| CviQI | GTAC | 4 cut(s) | 675, 829, 1225, 1441 |
| DdeI | CTNAG | 8 cut(s) | 18, 230, 396, 434, 567, 987, 1288, 1584 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2078 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2078 |
| EaeI | YGGCCR | 2 cut(s) | 1677, 2124 |
| Eam1104I | CTCTTC | 8 cut(s) | 216, 923, 945, 1056, 1071, 1328, 1965, 1988 |
| EarI | CTCTTC | 8 cut(s) | 216, 923, 945, 1056, 1071, 1328, 1965, 1988 |
| EciI | GGCGGA | 2 cut(s) | 389, 1918 |
| Ecl136II | GAGCTC | 3 cut(s) | 489, 1165, 2178 |
| Eco130I | CCWWGG | 1 cut(s) | 1215 |
| Eco24I | GRGCYC | 5 cut(s) | 209, 491, 1167, 1342, 2180 |
| Eco31I | GGTCTC | 3 cut(s) | 392, 1058, 1949 |
| Eco47I | GGWCC | 2 cut(s) | 144, 1017 |
| Eco47III | AGCGCT | 1 cut(s) | 1829 |
| Eco53kI | GAGCTC | 3 cut(s) | 489, 1165, 2178 |
| Eco57I | CTGAAG | 1 cut(s) | 1751 |
| Eco88I | CYCGRG | 1 cut(s) | 1436 |
| Eco91I | GGTNACC | 1 cut(s) | 2101 |
| EcoICRI | GAGCTC | 3 cut(s) | 489, 1165, 2178 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 926 |
| EcoO65I | GGTNACC | 1 cut(s) | 2101 |
| EcoRI | GAATTC | 2 cut(s) | 701, 1307 |
| EcoRII | CCWGG | 1 cut(s) | 411 |
| EcoT14I | CCWWGG | 1 cut(s) | 1215 |
| EcoT22I | ATGCAT | 1 cut(s) | 1562 |
| EcoT38I | GRGCYC | 5 cut(s) | 209, 491, 1167, 1342, 2180 |
| ErhI | CCWWGG | 1 cut(s) | 1215 |
| FaqI | GGGAC | 2 cut(s) | 219, 2177 |
| FauI | CCCGC | 2 cut(s) | 151, 2154 |
| FbaI | TGATCA | 2 cut(s) | 441, 1533 |
| FblI | GTMKAC | 1 cut(s) | 26 |
| Fnu4HI | GCNGC | 6 cut(s) | 135, 1230, 1484, 1508, 2095, 2159 |
| FokI | GGATG | 5 cut(s) | 179, 887, 1487, 1631, 1880 |
| FriOI | GRGCYC | 5 cut(s) | 209, 491, 1167, 1342, 2180 |
| Fsp4HI | GCNGC | 6 cut(s) | 135, 1230, 1484, 1508, 2095, 2159 |
| FspBI | CTAG | 1 cut(s) | 1362 |
| GlaI | GCGC | 3 cut(s) | 1829, 2151, 2157 |
| GluI | GCNGC | 6 cut(s) | 135, 1230, 1484, 1508, 2095, 2159 |
| HaeII | RGCGCY | 2 cut(s) | 1831, 2159 |
| HaeIII | GGCC | 5 cut(s) | 416, 773, 1299, 1679, 2126 |
| HapII | CCGG | 6 cut(s) | 196, 572, 723, 1785, 2106, 2218 |
| HgaI | GACGC | 2 cut(s) | 101, 401 |
| HhaI | GCGC | 3 cut(s) | 1830, 2152, 2158 |
| Hin1I | GRCGYC | 1 cut(s) | 93 |
| Hin6I | GCGC | 3 cut(s) | 1828, 2150, 2156 |
| HinP1I | GCGC | 3 cut(s) | 1828, 2150, 2156 |
| HinfI | GANTC | 8 cut(s) | 57, 839, 1432, 1449, 1469, 1790, 2084, 2228 |
| HpaII | CCGG | 6 cut(s) | 196, 572, 723, 1785, 2106, 2218 |
| HphI | GGTGA | 8 cut(s) | 673, 904, 1204, 1543, 1724, 1774, 1799, 2113 |
| Hpy166II | GTNNAC | 3 cut(s) | 27, 664, 2121 |
| Hpy8I | GTNNAC | 3 cut(s) | 27, 664, 2121 |
| Hpy99I | CGWCG | 7 cut(s) | 95, 300, 395, 824, 1469, 1892, 1913 |
| HpyCH4III | ACNGT | 2 cut(s) | 632, 865 |
| HpyCH4IV | ACGT | 3 cut(s) | 12, 298, 378 |
| HpyCH4V | TGCA | 7 cut(s) | 347, 388, 683, 718, 1510, 1560, 2019 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 413, 719, 1198, 1676, 2158 |
| HpyF3I | CTNAG | 8 cut(s) | 18, 230, 396, 434, 567, 987, 1288, 1584 |
| HpySE526I | ACGT | 3 cut(s) | 12, 298, 378 |
| Hsp92I | GRCGYC | 1 cut(s) | 93 |
| HspAI | GCGC | 3 cut(s) | 1828, 2150, 2156 |
| Kpn2I | TCCGGA | 1 cut(s) | 195 |
| Ksp22I | TGATCA | 2 cut(s) | 441, 1533 |
| LmnI | GCTCC | 9 cut(s) | 574, 725, 1162, 1197, 1345, 1426, 1825, 2183, 2238 |
| Lsp1109I | GCAGC | 5 cut(s) | 146, 1216, 1494, 2081, 2145 |
| LweI | GCATC | 6 cut(s) | 201, 375, 553, 1494, 1653, 1858 |
| MaeI | CTAG | 1 cut(s) | 1362 |
| MaeII | ACGT | 3 cut(s) | 12, 298, 378 |
| MaeIII | GTNAC | 6 cut(s) | 799, 865, 1046, 1712, 1741, 2101 |
| MbiI | CCGCTC | 3 cut(s) | 892, 1486, 1710 |
| MfeI | CAATTG | 3 cut(s) | 678, 1417, 1895 |
| MflI | RGATCY | 1 cut(s) | 967 |
| MhlI | GDGCHC | 7 cut(s) | 209, 283, 491, 905, 1167, 1342, 2180 |
| MlyI | GAGTC | 1 cut(s) | 848 |
| MmeI | TCCRAC | 2 cut(s) | 918, 2094 |
| Mph1103I | ATGCAT | 1 cut(s) | 1562 |
| MroI | TCCGGA | 1 cut(s) | 195 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1565 |
| MspI | CCGG | 6 cut(s) | 196, 572, 723, 1785, 2106, 2218 |
| MspR9I | CCNGG | 2 cut(s) | 413, 2218 |
| MunI | CAATTG | 3 cut(s) | 678, 1417, 1895 |
| MvaI | CCWGG | 1 cut(s) | 413 |
| MvnI | CGCG | 1 cut(s) | 158 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 413, 719, 1198, 1676, 2158 |
| NciI | CCSGG | 1 cut(s) | 2218 |
| NlaIV | GGNNCC | 9 cut(s) | 146, 200, 594, 694, 727, 856, 904, 1193, 1341 |
| NmeAIII | GCCGAG | 4 cut(s) | 442, 749, 811, 873 |
| NmuCI | GTSAC | 6 cut(s) | 799, 865, 1046, 1712, 1741, 2101 |
| NsiI | ATGCAT | 1 cut(s) | 1562 |
| NspI | RCATGY | 1 cut(s) | 2188 |
| NspV | TTCGAA | 1 cut(s) | 303 |
| PagI | TCATGA | 1 cut(s) | 2142 |
| PciI | ACATGT | 1 cut(s) | 2184 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 264, 361, 1056, 1884 |
| PfeI | GAWTC | 7 cut(s) | 57, 1432, 1449, 1469, 1790, 2084, 2228 |
| PflFI | GACNNNGTC | 1 cut(s) | 2048 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1257 |
| PinAI | ACCGGT | 1 cut(s) | 1784 |
| PkrI | GCNGC | 6 cut(s) | 136, 1231, 1485, 1509, 2096, 2160 |
| PleI | GAGTC | 1 cut(s) | 847 |
| PpsI | GAGTC | 1 cut(s) | 847 |
| PscI | ACATGT | 1 cut(s) | 2184 |
| PsiI | TTATAA | 1 cut(s) | 219 |
| Psp124BI | GAGCTC | 3 cut(s) | 491, 1167, 2180 |
| Psp1406I | AACGTT | 1 cut(s) | 12 |
| Psp6I | CCWGG | 1 cut(s) | 411 |
| PspEI | GGTNACC | 1 cut(s) | 2101 |
| PspGI | CCWGG | 1 cut(s) | 411 |
| PspN4I | GGNNCC | 9 cut(s) | 146, 200, 594, 694, 727, 856, 904, 1193, 1341 |
| PspPI | GGNCC | 2 cut(s) | 144, 1017 |
| PstNI | CAGNNNCTG | 2 cut(s) | 433, 2158 |
| PsuI | RGATCY | 1 cut(s) | 967 |
| PsyI | GACNNNGTC | 1 cut(s) | 2048 |
| RsaI | GTAC | 4 cut(s) | 676, 830, 1226, 1442 |
| RsaNI | GTAC | 4 cut(s) | 675, 829, 1225, 1441 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1565 |
| SacI | GAGCTC | 3 cut(s) | 491, 1167, 2180 |
| SatI | GCNGC | 6 cut(s) | 135, 1230, 1484, 1508, 2095, 2159 |
| Sau96I | GGNCC | 2 cut(s) | 144, 1017 |
| SchI | GAGTC | 1 cut(s) | 848 |
| ScrFI | CCNGG | 2 cut(s) | 413, 2218 |
| SduI | GDGCHC | 7 cut(s) | 209, 283, 491, 905, 1167, 1342, 2180 |
| SfaNI | GCATC | 6 cut(s) | 201, 375, 553, 1494, 1653, 1858 |
| SfcI | CTRYAG | 1 cut(s) | 457 |
| SfuI | TTCGAA | 1 cut(s) | 303 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1784 |
| SinI | GGWCC | 2 cut(s) | 144, 1017 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1565 |
| SmlI | CTYRAG | 1 cut(s) | 923 |
| SmoI | CTYRAG | 1 cut(s) | 923 |
| SsiI | CCGC | 9 cut(s) | 158, 374, 890, 1484, 1690, 1710, 1802, 1929, 2161 |
| SspMI | CTAG | 1 cut(s) | 1362 |
| SstI | GAGCTC | 3 cut(s) | 491, 1167, 2180 |
| StyD4I | CCNGG | 2 cut(s) | 411, 2216 |
| StyI | CCWWGG | 1 cut(s) | 1215 |
| TaaI | ACNGT | 2 cut(s) | 632, 865 |
| TaiI | ACGT | 3 cut(s) | 15, 301, 381 |
| TaqII | GACCGA | 1 cut(s) | 1034 |
| TatI | WGTACW | 1 cut(s) | 828 |
| TauI | GCSGC | 1 cut(s) | 1486 |
| TfiI | GAWTC | 7 cut(s) | 57, 1432, 1449, 1469, 1790, 2084, 2228 |
| TscAI | CASTG | 4 cut(s) | 130, 637, 868, 1051 |
| TseFI | GTSAC | 6 cut(s) | 799, 865, 1046, 1712, 1741, 2101 |
| TseI | GCWGC | 5 cut(s) | 134, 1229, 1507, 2094, 2158 |
| Tsp45I | GTSAC | 6 cut(s) | 799, 865, 1046, 1712, 1741, 2101 |
| TspGWI | ACGGA | 2 cut(s) | 1806, 2240 |
| TspRI | CASTG | 4 cut(s) | 130, 637, 868, 1051 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2048 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1257 |
| VpaK11BI | GGWCC | 2 cut(s) | 144, 1017 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 926 |
| XapI | RAATTY | 6 cut(s) | 305, 327, 525, 701, 1307, 1630 |
| XceI | RCATGY | 1 cut(s) | 2188 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 655, 703, 1011 |
| XmiI | GTMKAC | 1 cut(s) | 26 |
| XspI | CTAG | 1 cut(s) | 1362 |
| Zsp2I | ATGCAT | 1 cut(s) | 1562 |