Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000938.1

Orthogroup ID

OG0000335

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 2420

Gene Structure 2420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000938.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1832 bp

atttggtgaacaacttgggcacaattgcaaggtctggaaccaaggagtttatggaagctttggcttctggagtgtctgatgtgagcatgattggacagtttggtgttggtttctattcggcatatcttgttgcggagaaggtcattgtgactacaaagcacaatgacgatgagcaatacgtctgggagtctcaggctggtggttcattcactgtgacaagggatgttaatggtgagcagcttggcaggggaacaaagattaccctcttcctcaaggaggatcagttggaatacttggaagagaggaggatcaaagaccttgtgaagaagcattctgaattcatcagctatcccatctatttgtggactgagaagacaaccgaaaaggagatcagtgatgatgaagaggatgaacccaagaaggaagaagaaggagatattgaggaagttgatgaggacaaggagaaagaagggaaaaagaagaagaagatcaaggaagtttctcatgagtgggaactcatcaacaagcagaaaccaatctggctgcgcaagcctgaggaaatcaccaaggatgaatatgcctcattctacaagagcttgaccaatgattgggaggaacaccttgctgtgaagcacttctctgtggaaggacagcttgaattcaaagccatcctctttgttccaaagagggctccatttgacctgttcgataccaggaagaagatgaacaacattaagctatatgtgaggagggtgtttattatggacaactgtgaggagctcattccggagtatcttggatttgttaagggtgttgtggattctgacgacttgccactcaacatttctcgggagacgcttcaacagaacaagattttgaaggtgatcaggaagaaccttgtgaagaagtgcattgagatgttcaatgagattgctgaaaacaaagaggattacgccaagttttatgaggcattctcgaagaacttgaagttggggattcatgaggacagccagaatagaaccaagttggctgaccttctccgataccactccaccaagagtggtgacgatctcacaagcttgaaggactatgtaaccagaatgaaggagggccagaaggacatctactacattactggtgagagcaagaaggcagtggaaaactcgccattcttggaacgcctcaagaagaagggatatgaagttcttttcatggtggatgcaattgacgaatacgctgtgggacaattgaaggagtatgatgggaagaagcttgtgtctgctacaaaggaaggtctgaagctcgatgatgaatctgaggaagagaagaagaagaaagaggagaagaagaagtcttttgaggatctttgcaagacaatcaaagacatcttgggagaccgggttgagaaggtggttgtgtccgatagaattgtcgactcaccttgctgcttggtcactggtgaatatggctggagtgcaaacatggagaggattatgaaggctcaggcactcagggacaacagcatgggtgcttacatgtccagcaagaagaccatggaaatcaaccctgacaatggcatcatggaggagctgaggaagagagccgaagctgacaaaaacgacaagtccgtcaaggaccttgtgctgctgctgtttgagacagctcttttgacatctggattcagccttgatgagcctaacacttttgcctcgagaattcacaggatgctgaagctggggcttagcatcgaagaagatgagactgttgaggatgcggacatgcctgagttggaggatgcagctgaggagagcaaaatggaggaggtggactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0006457 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0009987 GO:0042742 GO:0043207 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0061077 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04217 ko04612 ko04621 ko04626 ko04657 ko04659 ko04914 ko04915 ko05200 ko05215 ko05418 map04141 map04151 map04217 map04612 map04621 map04626 map04657 map04659 map04914 map04915 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

609

Amino Acids

70.32

Weight (kDa)

5.04

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52640
fragaria_vesca	FvH4_2g04730 FvH4_2g04730 FvH4_2g04730 FvH4_2g13180 FvH4_7g30260 FvH4_7g30272
malus_domestica	MD00G1081900.v1.1 MD01G1208700.v1.1 MD07G1279100.v1.1 MD07G1279200.v1.1 MD11G1152300.v1.1 MD14G1110500.v1.1 MD14G1110600.v1.1
prunus_persica	Prupe.2G301300_v2.0.a1 Prupe.5G041100_v2.0.a1 Prupe.5G105600_v2.0.a1
pyrus_communis	pycom01g21930 pycom07g25400 pycom09g11140 pycom14g10530
rosa_chinensis	RchiOBHm_Chr1g0327061 RchiOBHm_Chr1g0378391 RchiOBHm_Chr1g0379711 RchiOBHm_Chr3g0488481 RchiOBHm_Chr4g0387881 RchiOBHm_Chr5g0021331 RchiOBHm_Chr5g0021341 RchiOBHm_Chr5g0021351 RchiOBHm_Chr6g0274441 RchiOBHm_Chr7g0196751 RchiOBHm_Chr7g0196771
rosa_laevigata	RLG00000003992 RLG00000008392 RLG00000009018 RLG00000013542 RLG00000026364 RLG00000026365 RLG00000026438 RLG00000032605
rosa_multiflora	Rmu_co8309643.1_g000001 Rmu_co8423093.1_g000001 Rmu_co8520529.1_g000002 Rmu_sc0000938.1_g000001 Rmu_sc0001083.1_g000031 Rmu_sc0001289.1_g000016 Rmu_sc0001777.1_g000013 Rmu_sc0003392.1_g000006 Rmu_sc0003600.1_g000010 Rmu_sc0004484.1_g000024 Rmu_sc0004847.1_g000017 Rmu_sc0009850.1_g000016 Rmu_sc0013411.1_g000009 Rmu_sc0024337.1_g000001 Rmu_sc0024338.1_g000001 Rmu_sc0029385.1_g000001 Rmu_sc0039495.1_g000001 Rmu_ssc0000259.1_g000042
rosa_roxburghii	Rroxscaffold_1G00057180 Rroxscaffold_3G00258970 Rroxscaffold_3G00258980 Rroxscaffold_4G00280480 Rroxscaffold_7G00194220 Rroxscaffold_7G00197660
rosa_rugosa	Rorug01G0408500 Rorug05G0066400 Rorug05G0066500 Rorug06G0081900 Rorug07G0036200
rosa_samantha	Rh1AG083900 Rh1AG430000 Rh1AG438200 Rh1AG438300 Rh1BG387700 Rh1BG394700 Rh1BG394800 Rh1CG081800 Rh1CG401200 Rh1CG407700 Rh1CG407800 Rh1DG327400 Rh1DG418800 Rh1DG425100 Rh1DG425200 Rh2AG541400 Rh2CG384100 Rh2CG524100 Rh4DG107200 Rh5AG155400 Rh5AG155500 Rh5AG155600 Rh5BG155000 Rh5BG155100 Rh5CG168500 Rh5CG168600 Rh5CG168700 Rh5DG155600 Rh6AG198300 Rh6BG201600 Rh6BG491300 Rh6CG202400 Rh6DG192800 Rh7AG160000 Rh7AG160100 Rh7BG162200 Rh7CG168600 Rh7DG161300
rosa_wichuraiana	Rw1G037630 Rw5G013860 Rw6G017240 Rw7G013990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1627
Acc16I	TGCGCA	1 cut(s)	547
AccB7I	CCANNNNNTGG	1 cut(s)	608
AccI	GTMKAC	1 cut(s)	1433
AccIII	TCCGGA	1 cut(s)	786
AciI	CCGC	2 cut(s)	133, 1774
AclWI	GGATC	3 cut(s)	287, 316, 1370
AcsI	RAATTY	3 cut(s)	337, 658, 1715
AcuI	CTGAAG	2 cut(s)	1318, 1750
AfiI	CCNNNNNNNGG	3 cut(s)	276, 608, 1573
AflIII	ACRYGT	1 cut(s)	1535
AgsI	TTSAA	8 cut(s)	658, 663, 862, 879, 924, 987, 1083, 1251
AjnI	CCWGG	1 cut(s)	712
AjuI	GAANNNNNNNTTGG	2 cut(s)	973, 1005
AloI	GAACNNNNNNTCC	2 cut(s)	1187, 1219
Alw21I	GWGCWC	1 cut(s)	782
Alw26I	GTCTC	5 cut(s)	194, 847, 1388, 1651, 1753
AlwI	GGATC	3 cut(s)	287, 316, 1370
Ama87I	CYCGRG	2 cut(s)	848, 1710
Aor13HI	TCCGGA	1 cut(s)	786
AoxI	GGCC	1 cut(s)	1110
ApeKI	GCWGC	6 cut(s)	237, 543, 1445, 1644, 1647, 1798
ApoI	RAATTY	3 cut(s)	337, 658, 1715
ArsI	GACNNNNNNTTYG	2 cut(s)	1650, 1682
Asp700I	GAANNNNTTC	1 cut(s)	634
AspLEI	GCGC	1 cut(s)	548
AspS9I	GGNCC	2 cut(s)	1110, 1635
AsuC2I	CCSGG	1 cut(s)	1399
AsuHPI	GGTGA	8 cut(s)	18, 244, 555, 894, 1075, 1150, 1430, 1471
AvaI	CYCGRG	2 cut(s)	848, 1710
AvaII	GGWCC	1 cut(s)	1635
AxyI	CCTNAGG	1 cut(s)	554
BaeGI	GKGCMC	1 cut(s)	22
BanII	GRGCYC	2 cut(s)	693, 782
BarI	GAAGNNNNNNTAC	2 cut(s)	1108, 1140
BbsI	GAAGAC	2 cut(s)	379, 1555
Bbv12I	GWGCWC	1 cut(s)	782
BbvCI	CCTCAGC	2 cut(s)	1591, 1802
BbvI	GCAGC	6 cut(s)	249, 530, 1432, 1631, 1634, 1810
BccI	CCATC	3 cut(s)	361, 676, 1255
BciT130I	CCWGG	1 cut(s)	714
BclI	TGATCA	1 cut(s)	884
BcnI	CCSGG	1 cut(s)	1399
BcoDI	GTCTC	5 cut(s)	194, 847, 1388, 1651, 1753
BisI	GCNGC	6 cut(s)	238, 544, 1446, 1645, 1648, 1799
BlpI	GCTNAGC	1 cut(s)	1741
BlsI	GCNGC	6 cut(s)	239, 545, 1447, 1646, 1649, 1800
Bme1390I	CCNGG	2 cut(s)	714, 1399
Bme18I	GGWCC	1 cut(s)	1635
BmeT110I	CYCGRG	2 cut(s)	848, 1710
BmgT120I	GGNCC	2 cut(s)	1110, 1635
BmiI	GGNNCC	2 cut(s)	39, 692
BmrFI	CCNGG	2 cut(s)	714, 1399
BmsI	GCATC	6 cut(s)	1209, 1586, 1715, 1754, 1761, 1785
BpiI	GAAGAC	2 cut(s)	379, 1555
BplI	GAGNNNNNCTC	2 cut(s)	958, 990
BpmI	CTGGAG	2 cut(s)	89, 1491
Bpu10I	CCTNAGC	3 cut(s)	1502, 1591, 1802
Bpu1102I	GCTNAGC	1 cut(s)	1741
BpuEI	CTTGAG	2 cut(s)	256, 1168
BpuMI	CCSGG	1 cut(s)	1399
BsaI	GGTCTC	1 cut(s)	1388
BsaJI	CCNNGG	3 cut(s)	41, 566, 1553
BsaWI	WCCGGW	1 cut(s)	786
BsaXI	ACNNNNNCTCC	4 cut(s)	268, 298, 1385, 1415
Bsc4I	CCNNNNNNNGG	3 cut(s)	276, 608, 1573
Bse1I	ACTGG	2 cut(s)	1140, 1461
Bse21I	CCTNAGG	1 cut(s)	554
BseAI	TCCGGA	1 cut(s)	786
BseBI	CCWGG	1 cut(s)	714
BseDI	CCNNGG	3 cut(s)	41, 566, 1553
BseGI	GGATG	8 cut(s)	228, 414, 576, 668, 1224, 1730, 1776, 1800
BseLI	CCNNNNNNNGG	3 cut(s)	276, 608, 1573
BseMII	CTCAG	9 cut(s)	205, 359, 545, 1307, 1516, 1524, 1582, 1775, 1793
BseNI	ACTGG	2 cut(s)	1140, 1461
BseRI	GAGGAG	6 cut(s)	318, 762, 790, 1354, 1600, 1819
BseSI	GKGCMC	1 cut(s)	22
BseXI	GCAGC	6 cut(s)	249, 530, 1432, 1631, 1634, 1810
BseYI	CCCAGC	1 cut(s)	1734
BshFI	GGCC	1 cut(s)	1112
BsiHKAI	GWGCWC	1 cut(s)	782
BsiHKCI	CYCGRG	2 cut(s)	848, 1710
BsiSI	CCGG	2 cut(s)	787, 1398
BslFI	GGGAC	2 cut(s)	1256, 1528
BslI	CCNNNNNNNGG	3 cut(s)	276, 608, 1573
BsmAI	GTCTC	5 cut(s)	194, 847, 1388, 1651, 1753
BsmBI	CGTCTC	1 cut(s)	847
BsmFI	GGGAC	2 cut(s)	1256, 1528
BsmI	GAATGC	2 cut(s)	330, 970
BsnI	GGCC	1 cut(s)	1112
Bso31I	GGTCTC	1 cut(s)	1388
BsoBI	CYCGRG	2 cut(s)	848, 1710
Bsp1286I	GDGCHC	3 cut(s)	22, 693, 782
Bsp13I	TCCGGA	1 cut(s)	786
Bsp143I	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
Bsp1720I	GCTNAGC	1 cut(s)	1741
Bsp19I	CCATGG	1 cut(s)	1553
BspACI	CCGC	2 cut(s)	133, 1774
BspANI	GGCC	1 cut(s)	1112
BspCNI	CTCAG	9 cut(s)	204, 360, 546, 1308, 1515, 1523, 1583, 1776, 1794
BspEI	TCCGGA	1 cut(s)	786
BspHI	TCATGA	2 cut(s)	504, 999
BspLI	GGNNCC	2 cut(s)	39, 692
BspPI	GGATC	3 cut(s)	287, 316, 1370
BspTNI	GGTCTC	1 cut(s)	1388
BsrI	ACTGG	2 cut(s)	1140, 1461
BssECI	CCNNGG	3 cut(s)	41, 566, 1553
BssMI	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
BssT1I	CCWWGG	3 cut(s)	41, 566, 1553
Bst2UI	CCWGG	1 cut(s)	714
Bst4CI	ACNGT	4 cut(s)	98, 213, 772, 1764
Bst6I	CTCTTC	5 cut(s)	271, 293, 398, 1316, 1591
BstC8I	GCNNGC	1 cut(s)	550
BstDSI	CCRYGG	1 cut(s)	1553
BstENI	CCTNNNNNAGG	1 cut(s)	274
BstF5I	GGATG	8 cut(s)	228, 414, 576, 668, 1224, 1730, 1776, 1800
BstHHI	GCGC	1 cut(s)	548
BstKTI	GATC	7 cut(s)	282, 311, 392, 491, 887, 1071, 1365
BstMAI	GTCTC	5 cut(s)	194, 847, 1388, 1651, 1753
BstMBI	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
BstMWI	GCNNNNNNNGC	1 cut(s)	549
BstNI	CCWGG	1 cut(s)	714
BstNSI	RCATGY	2 cut(s)	1539, 1782
BstSCI	CCNGG	2 cut(s)	712, 1397
BstSLI	GKGCMC	1 cut(s)	22
BstV1I	GCAGC	6 cut(s)	249, 530, 1432, 1631, 1634, 1810
BstV2I	GAAGAC	2 cut(s)	379, 1555
BstX2I	RGATCY	1 cut(s)	1362
BstYI	RGATCY	1 cut(s)	1362
Bsu36I	CCTNAGG	1 cut(s)	554
BsuRI	GGCC	1 cut(s)	1112
BtgI	CCRYGG	1 cut(s)	1553
BtsCI	GGATG	8 cut(s)	228, 414, 576, 668, 1224, 1730, 1776, 1800
BtsI	GCAGTG	1 cut(s)	1160
BtsIMutI	CAGTG	4 cut(s)	209, 399, 1160, 1454
Cac8I	GCNNGC	1 cut(s)	550
CciI	TCATGA	2 cut(s)	504, 999
CfoI	GCGC	1 cut(s)	548
Cfr13I	GGNCC	2 cut(s)	1110, 1635
CseI	GACGC	1 cut(s)	864
DpnI	GATC	7 cut(s)	281, 310, 391, 490, 886, 1070, 1364
DpnII	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
DrdI	GACNNNNNNGTC	1 cut(s)	1627
DseDI	GACNNNNNNGTC	1 cut(s)	1627
Eam1104I	CTCTTC	5 cut(s)	271, 293, 398, 1316, 1591
EarI	CTCTTC	5 cut(s)	271, 293, 398, 1316, 1591
Ecl136II	GAGCTC	1 cut(s)	780
Eco130I	CCWWGG	3 cut(s)	41, 566, 1553
Eco24I	GRGCYC	2 cut(s)	693, 782
Eco31I	GGTCTC	1 cut(s)	1388
Eco47I	GGWCC	1 cut(s)	1635
Eco53kI	GAGCTC	1 cut(s)	780
Eco57I	CTGAAG	2 cut(s)	1318, 1750
Eco81I	CCTNAGG	1 cut(s)	554
Eco88I	CYCGRG	2 cut(s)	848, 1710
EcoICRI	GAGCTC	1 cut(s)	780
EcoNI	CCTNNNNNAGG	1 cut(s)	274
EcoO109I	RGGNCCY	1 cut(s)	1635
EcoRI	GAATTC	3 cut(s)	337, 658, 1715
EcoRII	CCWGG	1 cut(s)	712
EcoT14I	CCWWGG	3 cut(s)	41, 566, 1553
EcoT38I	GRGCYC	2 cut(s)	693, 782
ErhI	CCWWGG	3 cut(s)	41, 566, 1553
Esp3I	CGTCTC	1 cut(s)	847
FalI	AAGNNNNNCTT	2 cut(s)	638, 670
FaqI	GGGAC	2 cut(s)	1256, 1528
FbaI	TGATCA	1 cut(s)	884
FblI	GTMKAC	1 cut(s)	1433
Fnu4HI	GCNGC	6 cut(s)	238, 544, 1446, 1645, 1648, 1799
FokI	GGATG	8 cut(s)	235, 421, 583, 655, 1231, 1737, 1783, 1807
FriOI	GRGCYC	2 cut(s)	693, 782
Fsp4HI	GCNGC	6 cut(s)	238, 544, 1446, 1645, 1648, 1799
FspI	TGCGCA	1 cut(s)	547
GlaI	GCGC	1 cut(s)	547
GluI	GCNGC	6 cut(s)	238, 544, 1446, 1645, 1648, 1799
GsaI	CCCAGC	1 cut(s)	1738
GsuI	CTGGAG	2 cut(s)	89, 1491
HaeIII	GGCC	1 cut(s)	1112
HapII	CCGG	2 cut(s)	787, 1398
HgaI	GACGC	1 cut(s)	864
HhaI	GCGC	1 cut(s)	548
Hin6I	GCGC	1 cut(s)	546
HinP1I	GCGC	1 cut(s)	546
HincII	GTYRAC	1 cut(s)	1434
HindII	GTYRAC	1 cut(s)	1434
HindIII	AAGCTT	3 cut(s)	56, 1077, 1270
HinfI	GANTC	6 cut(s)	187, 820, 996, 1312, 1435, 1679
HpaII	CCGG	2 cut(s)	787, 1398
HphI	GGTGA	8 cut(s)	18, 244, 555, 894, 1075, 1150, 1430, 1471
Hpy166II	GTNNAC	4 cut(s)	9, 365, 1434, 1827
Hpy188I	TCNGA	7 cut(s)	78, 336, 825, 1042, 1298, 1317, 1422
Hpy8I	GTNNAC	4 cut(s)	9, 365, 1434, 1827
HpyCH4III	ACNGT	4 cut(s)	98, 213, 772, 1764
HpyCH4IV	ACGT	1 cut(s)	179
HpyCH4V	TGCA	6 cut(s)	28, 911, 1222, 1370, 1477, 1798
HpyF10VI	GCNNNNNNNGC	1 cut(s)	549
HpySE526I	ACGT	1 cut(s)	179
HspAI	GCGC	1 cut(s)	546
Kpn2I	TCCGGA	1 cut(s)	786
Ksp22I	TGATCA	1 cut(s)	884
Kzo9I	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
LmnI	GCTCC	3 cut(s)	696, 777, 1587
Lsp1109I	GCAGC	6 cut(s)	249, 530, 1432, 1631, 1634, 1810
LweI	GCATC	6 cut(s)	1209, 1586, 1715, 1754, 1761, 1785
MaeII	ACGT	1 cut(s)	179
MaeIII	GTNAC	5 cut(s)	147, 213, 1063, 1092, 1452
MalI	GATC	7 cut(s)	281, 310, 391, 490, 886, 1070, 1364
MboI	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
MfeI	CAATTG	3 cut(s)	23, 1223, 1246
MflI	RGATCY	1 cut(s)	1362
MhlI	GDGCHC	3 cut(s)	22, 693, 782
MluCI	AATT	7 cut(s)	23, 337, 658, 1223, 1246, 1427, 1715
MlyI	GAGTC	2 cut(s)	196, 1429
MmeI	TCCRAC	2 cut(s)	266, 1769
MroI	TCCGGA	1 cut(s)	786
MroXI	GAANNNNTTC	1 cut(s)	634
MseI	TTAA	3 cut(s)	227, 734, 806
MslI	CAYNNNNRTG	1 cut(s)	916
MspA1I	CMGCKG	1 cut(s)	1801
MspI	CCGG	2 cut(s)	787, 1398
MspR9I	CCNGG	2 cut(s)	714, 1399
MunI	CAATTG	3 cut(s)	23, 1223, 1246
Mva1269I	GAATGC	2 cut(s)	330, 970
MvaI	CCWGG	1 cut(s)	714
MwoI	GCNNNNNNNGC	1 cut(s)	549
NciI	CCSGG	1 cut(s)	1399
NcoI	CCATGG	1 cut(s)	1553
NdeII	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
NlaIV	GGNNCC	2 cut(s)	39, 692
NmuCI	GTSAC	4 cut(s)	147, 213, 1063, 1452
NsbI	TGCGCA	1 cut(s)	547
NspI	RCATGY	2 cut(s)	1539, 1782
PaeR7I	CTCGAG	1 cut(s)	1710
PagI	TCATGA	2 cut(s)	504, 999
PciI	ACATGT	1 cut(s)	1535
PcsI	WCGNNNNNNNCGW	1 cut(s)	1625
PctI	GAATGC	2 cut(s)	330, 970
PdmI	GAANNNNTTC	1 cut(s)	634
PfeI	GAWTC	4 cut(s)	820, 996, 1312, 1679
PflMI	CCANNNNNTGG	1 cut(s)	608
PkrI	GCNGC	6 cut(s)	239, 545, 1447, 1646, 1649, 1800
PleI	GAGTC	2 cut(s)	195, 1429
PpsI	GAGTC	2 cut(s)	195, 1429
PpuMI	RGGWCCY	1 cut(s)	1635
PscI	ACATGT	1 cut(s)	1535
Psp124BI	GAGCTC	1 cut(s)	782
Psp5II	RGGWCCY	1 cut(s)	1635
Psp6I	CCWGG	1 cut(s)	712
PspFI	CCCAGC	1 cut(s)	1734
PspGI	CCWGG	1 cut(s)	712
PspN4I	GGNNCC	2 cut(s)	39, 692
PspPI	GGNCC	2 cut(s)	1110, 1635
PspPPI	RGGWCCY	1 cut(s)	1635
PsrI	GAACNNNNNNTAC	2 cut(s)	243, 275
PsuI	RGATCY	1 cut(s)	1362
PvuII	CAGCTG	1 cut(s)	1801
RseI	CAYNNNNRTG	1 cut(s)	916
SacI	GAGCTC	1 cut(s)	782
SalI	GTCGAC	1 cut(s)	1432
SaqAI	TTAA	3 cut(s)	227, 734, 806
SatI	GCNGC	6 cut(s)	238, 544, 1446, 1645, 1648, 1799
Sau3AI	GATC	7 cut(s)	279, 308, 389, 488, 884, 1068, 1362
Sau96I	GGNCC	2 cut(s)	1110, 1635
SchI	GAGTC	2 cut(s)	196, 1429
ScrFI	CCNGG	2 cut(s)	714, 1399
SduI	GDGCHC	3 cut(s)	22, 693, 782
SfaNI	GCATC	6 cut(s)	1209, 1586, 1715, 1754, 1761, 1785
Sfr274I	CTCGAG	1 cut(s)	1710
SinI	GGWCC	1 cut(s)	1635
SlaI	CTCGAG	1 cut(s)	1710
SmiMI	CAYNNNNRTG	1 cut(s)	916
SmlI	CTYRAG	3 cut(s)	271, 1183, 1710
SmoI	CTYRAG	3 cut(s)	271, 1183, 1710
Sse9I	AATT	7 cut(s)	23, 337, 658, 1223, 1246, 1427, 1715
SsiI	CCGC	2 cut(s)	133, 1774
SstI	GAGCTC	1 cut(s)	782
StyD4I	CCNGG	2 cut(s)	712, 1397
StyI	CCWWGG	3 cut(s)	41, 566, 1553
TaaI	ACNGT	4 cut(s)	98, 213, 772, 1764
TaiI	ACGT	1 cut(s)	182
TaqI	TCGA	6 cut(s)	707, 976, 1304, 1433, 1711, 1748
TasI	AATT	7 cut(s)	23, 337, 658, 1223, 1246, 1427, 1715
TfiI	GAWTC	4 cut(s)	820, 996, 1312, 1679
Tru1I	TTAA	3 cut(s)	227, 734, 806
Tru9I	TTAA	3 cut(s)	227, 734, 806
TscAI	CASTG	4 cut(s)	216, 399, 1160, 1461
TseFI	GTSAC	4 cut(s)	147, 213, 1063, 1452
TseI	GCWGC	6 cut(s)	237, 543, 1445, 1644, 1647, 1798
Tsp45I	GTSAC	4 cut(s)	147, 213, 1063, 1452
TspGWI	ACGGA	1 cut(s)	1617
TspRI	CASTG	4 cut(s)	216, 399, 1160, 1461
Van91I	CCANNNNNTGG	1 cut(s)	608
VpaK11BI	GGWCC	1 cut(s)	1635
XagI	CCTNNNNNAGG	1 cut(s)	274
XapI	RAATTY	3 cut(s)	337, 658, 1715
XceI	RCATGY	2 cut(s)	1539, 1782
XcmI	CCANNNNNNNNNTGG	1 cut(s)	48
XhoI	CTCGAG	1 cut(s)	1710
XmiI	GTMKAC	1 cut(s)	1433
XmnI	GAANNNNTTC	1 cut(s)	634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.