Heat shock protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HATPase_c | PF02518 | 29 - 182 | 2.8e-06 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
| HATPase_c_3 | PF13589 | 31 - 147 | 3.2e-07 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
| HSP90 | PF00183 | 185 - 255 | 1.8e-15 | Hsp90 protein |
| HSP90 | PF00183 | 253 - 531 | 3.5e-119 | Hsp90 protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1403 |
| Acc16I | TGCGCA | 1 cut(s) | 177 |
| Acc65I | GGTACC | 1 cut(s) | 819 |
| AccB1I | GGYRCC | 1 cut(s) | 819 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1349 |
| AccI | GTMKAC | 1 cut(s) | 1608 |
| AccII | CGCG | 2 cut(s) | 99, 1484 |
| AccIII | TCCGGA | 1 cut(s) | 299 |
| AciI | CCGC | 4 cut(s) | 5, 11, 384, 1484 |
| AclWI | GGATC | 6 cut(s) | 552, 581, 1274, 1299, 1312, 1463 |
| AcsI | RAATTY | 3 cut(s) | 135, 602, 937 |
| AcuI | CTGAAG | 2 cut(s) | 878, 1605 |
| AfaI | GTAC | 1 cut(s) | 821 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1349 |
| AflII | CTTAAG | 1 cut(s) | 536 |
| AflIII | ACRYGT | 1 cut(s) | 1311 |
| AgsI | TTSAA | 3 cut(s) | 1027, 1075, 1507 |
| AjnI | CCWGG | 1 cut(s) | 27 |
| Alw26I | GTCTC | 2 cut(s) | 8, 1427 |
| AlwI | GGATC | 6 cut(s) | 552, 581, 1274, 1299, 1312, 1463 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 49 |
| Aor13HI | TCCGGA | 1 cut(s) | 299 |
| AoxI | GGCC | 5 cut(s) | 30, 321, 886, 1377, 1513 |
| ApeKI | GCWGC | 5 cut(s) | 502, 1221, 1420, 1423, 1538 |
| ApoI | RAATTY | 3 cut(s) | 135, 602, 937 |
| Asp718I | GGTACC | 1 cut(s) | 819 |
| AspLEI | GCGC | 3 cut(s) | 178, 187, 957 |
| AspS9I | GGNCC | 8 cut(s) | 297, 580, 844, 886, 1377, 1411, 1513, 1573 |
| AsuC2I | CCSGG | 1 cut(s) | 1453 |
| AsuHPI | GGTGA | 7 cut(s) | 283, 466, 851, 926, 1240, 1247, 1556 |
| AvaII | GGWCC | 5 cut(s) | 297, 580, 844, 1411, 1573 |
| BaeGI | GKGCMC | 1 cut(s) | 287 |
| BamHI | GGATCC | 1 cut(s) | 1304 |
| BanI | GGYRCC | 1 cut(s) | 819 |
| BauI | CACGAG | 1 cut(s) | 481 |
| BbsI | GAAGAC | 4 cut(s) | 644, 752, 786, 1331 |
| BbvCI | CCTCAGC | 1 cut(s) | 1517 |
| BbvI | GCAGC | 5 cut(s) | 514, 1208, 1407, 1410, 1550 |
| BccI | CCATC | 3 cut(s) | 626, 1031, 1591 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 992, 1026 |
| BciT130I | CCWGG | 1 cut(s) | 29 |
| BclI | TGATCA | 1 cut(s) | 57 |
| BcnI | CCSGG | 1 cut(s) | 1453 |
| BcoDI | GTCTC | 2 cut(s) | 8, 1427 |
| BfaI | CTAG | 3 cut(s) | 506, 560, 1317 |
| BfmI | CTRYAG | 2 cut(s) | 73, 1014 |
| BfoI | RGCGCY | 2 cut(s) | 188, 958 |
| BfrI | CTTAAG | 1 cut(s) | 536 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 29, 803 |
| BisI | GCNGC | 6 cut(s) | 503, 1222, 1421, 1424, 1485, 1539 |
| BlsI | GCNGC | 6 cut(s) | 504, 1223, 1422, 1425, 1486, 1540 |
| Bme1390I | CCNGG | 2 cut(s) | 29, 1453 |
| Bme18I | GGWCC | 5 cut(s) | 297, 580, 844, 1411, 1573 |
| BmgT120I | GGNCC | 8 cut(s) | 297, 580, 844, 886, 1377, 1411, 1513, 1573 |
| BmiI | GGNNCC | 5 cut(s) | 304, 469, 517, 821, 1306 |
| BmrFI | CCNGG | 2 cut(s) | 29, 1453 |
| BmsI | GCATC | 4 cut(s) | 112, 163, 985, 1540 |
| BpiI | GAAGAC | 4 cut(s) | 644, 752, 786, 1331 |
| BpmI | CTGGAG | 1 cut(s) | 354 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1278, 1517 |
| BpuEI | CTTGAG | 1 cut(s) | 944 |
| BpuMI | CCSGG | 1 cut(s) | 1453 |
| Bsa29I | ATCGAT | 1 cut(s) | 1002 |
| BsaI | GGTCTC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 1 cut(s) | 306 |
| BsaWI | WCCGGW | 2 cut(s) | 299, 816 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 533, 563 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1349 |
| Bse118I | RCCGGY | 1 cut(s) | 181 |
| Bse1I | ACTGG | 1 cut(s) | 916 |
| BseAI | TCCGGA | 1 cut(s) | 299 |
| BseBI | CCWGG | 1 cut(s) | 29 |
| BseCI | ATCGAT | 1 cut(s) | 1002 |
| BseDI | CCNNGG | 1 cut(s) | 306 |
| BseGI | GGATG | 5 cut(s) | 13, 1000, 1471, 1506, 1537 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1349 |
| BseMII | CTCAG | 7 cut(s) | 41, 390, 636, 1083, 1292, 1300, 1531 |
| BseNI | ACTGG | 1 cut(s) | 916 |
| BseRI | GAGGAG | 4 cut(s) | 578, 583, 1130, 1376 |
| BseSI | GKGCMC | 1 cut(s) | 287 |
| BseXI | GCAGC | 5 cut(s) | 514, 1208, 1407, 1410, 1550 |
| BseYI | CCCAGC | 1 cut(s) | 1510 |
| Bsh1236I | CGCG | 2 cut(s) | 99, 1484 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1002 |
| BshFI | GGCC | 5 cut(s) | 32, 323, 888, 1379, 1515 |
| BshNI | GGYRCC | 1 cut(s) | 819 |
| BshVI | ATCGAT | 1 cut(s) | 1002 |
| BsiEI | CGRYCG | 1 cut(s) | 1002 |
| BsiSI | CCGG | 4 cut(s) | 182, 300, 817, 1452 |
| BslFI | GGGAC | 1 cut(s) | 1304 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1349 |
| BsmAI | GTCTC | 2 cut(s) | 8, 1427 |
| BsmFI | GGGAC | 1 cut(s) | 1304 |
| BsnI | GGCC | 5 cut(s) | 32, 323, 888, 1379, 1515 |
| Bso31I | GGTCTC | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 1 cut(s) | 287 |
| Bsp13I | TCCGGA | 1 cut(s) | 299 |
| Bsp68I | TCGCGA | 1 cut(s) | 99 |
| BspACI | CCGC | 4 cut(s) | 5, 11, 384, 1484 |
| BspANI | GGCC | 5 cut(s) | 32, 323, 888, 1379, 1515 |
| BspCNI | CTCAG | 7 cut(s) | 42, 391, 637, 1084, 1291, 1299, 1530 |
| BspDI | ATCGAT | 1 cut(s) | 1002 |
| BspEI | TCCGGA | 1 cut(s) | 299 |
| BspFNI | CGCG | 2 cut(s) | 99, 1484 |
| BspHI | TCATGA | 2 cut(s) | 775, 1269 |
| BspLI | GGNNCC | 5 cut(s) | 304, 469, 517, 821, 1306 |
| BspPI | GGATC | 6 cut(s) | 552, 581, 1274, 1299, 1312, 1463 |
| BspT107I | GGYRCC | 1 cut(s) | 819 |
| BspTI | CTTAAG | 1 cut(s) | 536 |
| BspTNI | GGTCTC | 1 cut(s) | 8 |
| BsrFI | RCCGGY | 1 cut(s) | 181 |
| BsrI | ACTGG | 1 cut(s) | 916 |
| BssAI | RCCGGY | 1 cut(s) | 181 |
| BssECI | CCNNGG | 1 cut(s) | 306 |
| BssSI | CACGAG | 1 cut(s) | 481 |
| BssT1I | CCWWGG | 1 cut(s) | 306 |
| Bst2BI | CACGAG | 1 cut(s) | 481 |
| Bst2UI | CCWGG | 1 cut(s) | 29 |
| Bst4CI | ACNGT | 2 cut(s) | 363, 478 |
| Bst6I | CTCTTC | 5 cut(s) | 687, 1092, 1103, 1367, 1581 |
| BstAFI | CTTAAG | 1 cut(s) | 536 |
| BstC8I | GCNNGC | 3 cut(s) | 167, 459, 1563 |
| BstDEI | CTNAG | 7 cut(s) | 50, 399, 645, 1092, 1278, 1286, 1517 |
| BstF5I | GGATG | 5 cut(s) | 13, 1000, 1471, 1506, 1537 |
| BstFNI | CGCG | 2 cut(s) | 99, 1484 |
| BstH2I | RGCGCY | 2 cut(s) | 188, 958 |
| BstHHI | GCGC | 3 cut(s) | 178, 187, 957 |
| BstMAI | GTCTC | 2 cut(s) | 8, 1427 |
| BstMCI | CGRYCG | 1 cut(s) | 1002 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 29, 175, 182, 184, 803 |
| BstNI | CCWGG | 1 cut(s) | 29 |
| BstNSI | RCATGY | 1 cut(s) | 1315 |
| BstSCI | CCNGG | 2 cut(s) | 27, 1451 |
| BstSFI | CTRYAG | 2 cut(s) | 73, 1014 |
| BstSLI | GKGCMC | 1 cut(s) | 287 |
| BstUI | CGCG | 2 cut(s) | 99, 1484 |
| BstV1I | GCAGC | 5 cut(s) | 514, 1208, 1407, 1410, 1550 |
| BstV2I | GAAGAC | 4 cut(s) | 644, 752, 786, 1331 |
| BstX2I | RGATCY | 1 cut(s) | 1304 |
| BstYI | RGATCY | 1 cut(s) | 1304 |
| Bsu15I | ATCGAT | 1 cut(s) | 1002 |
| BsuRI | GGCC | 5 cut(s) | 32, 323, 888, 1379, 1515 |
| BsuTUI | ATCGAT | 1 cut(s) | 1002 |
| BtsCI | GGATG | 5 cut(s) | 13, 1000, 1471, 1506, 1537 |
| BtsI | GCAGTG | 1 cut(s) | 936 |
| BtsIMutI | CAGTG | 1 cut(s) | 936 |
| BtuMI | TCGCGA | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 3 cut(s) | 167, 459, 1563 |
| CaiI | CAGNNNCTG | 1 cut(s) | 49 |
| CciI | TCATGA | 2 cut(s) | 775, 1269 |
| CfoI | GCGC | 3 cut(s) | 178, 187, 957 |
| Cfr10I | RCCGGY | 1 cut(s) | 181 |
| Cfr13I | GGNCC | 8 cut(s) | 297, 580, 844, 886, 1377, 1411, 1513, 1573 |
| ClaI | ATCGAT | 1 cut(s) | 1002 |
| Csp6I | GTAC | 1 cut(s) | 820 |
| CviAII | CATG | 9 cut(s) | 253, 352, 776, 988, 1270, 1300, 1312, 1357, 1577 |
| CviQI | GTAC | 1 cut(s) | 820 |
| DdeI | CTNAG | 7 cut(s) | 50, 399, 645, 1092, 1278, 1286, 1517 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1403 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1403 |
| Eam1104I | CTCTTC | 5 cut(s) | 687, 1092, 1103, 1367, 1581 |
| EarI | CTCTTC | 5 cut(s) | 687, 1092, 1103, 1367, 1581 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 1 cut(s) | 306 |
| Eco147I | AGGCCT | 1 cut(s) | 323 |
| Eco31I | GGTCTC | 1 cut(s) | 8 |
| Eco47I | GGWCC | 5 cut(s) | 297, 580, 844, 1411, 1573 |
| Eco57I | CTGAAG | 2 cut(s) | 878, 1605 |
| EcoO109I | RGGNCCY | 3 cut(s) | 580, 844, 1411 |
| EcoRI | GAATTC | 2 cut(s) | 602, 937 |
| EcoRII | CCWGG | 1 cut(s) | 27 |
| EcoT14I | CCWWGG | 1 cut(s) | 306 |
| ErhI | CCWWGG | 1 cut(s) | 306 |
| FaeI | CATG | 9 cut(s) | 256, 355, 779, 991, 1273, 1303, 1315, 1360, 1580 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1115, 1147 |
| FaqI | GGGAC | 1 cut(s) | 1304 |
| FatI | CATG | 9 cut(s) | 252, 351, 775, 987, 1269, 1299, 1311, 1356, 1576 |
| FbaI | TGATCA | 1 cut(s) | 57 |
| FblI | GTMKAC | 1 cut(s) | 1608 |
| Fnu4HI | GCNGC | 6 cut(s) | 503, 1222, 1421, 1424, 1485, 1539 |
| FokI | GGATG | 5 cut(s) | 20, 1007, 1478, 1513, 1544 |
| Fsp4HI | GCNGC | 6 cut(s) | 503, 1222, 1421, 1424, 1485, 1539 |
| FspBI | CTAG | 3 cut(s) | 506, 560, 1317 |
| FspI | TGCGCA | 1 cut(s) | 177 |
| GlaI | GCGC | 3 cut(s) | 177, 186, 956 |
| GluI | GCNGC | 6 cut(s) | 503, 1222, 1421, 1424, 1485, 1539 |
| GsaI | CCCAGC | 1 cut(s) | 1514 |
| GsuI | CTGGAG | 1 cut(s) | 354 |
| HaeII | RGCGCY | 2 cut(s) | 188, 958 |
| HaeIII | GGCC | 5 cut(s) | 32, 323, 888, 1379, 1515 |
| HapII | CCGG | 4 cut(s) | 182, 300, 817, 1452 |
| HhaI | GCGC | 3 cut(s) | 178, 187, 957 |
| Hin1II | CATG | 9 cut(s) | 256, 355, 779, 991, 1273, 1303, 1315, 1360, 1580 |
| Hin6I | GCGC | 3 cut(s) | 176, 185, 955 |
| HinP1I | GCGC | 3 cut(s) | 176, 185, 955 |
| HincII | GTYRAC | 3 cut(s) | 217, 718, 1609 |
| HindII | GTYRAC | 3 cut(s) | 217, 718, 1609 |
| HindIII | AAGCTT | 2 cut(s) | 167, 1076 |
| HinfI | GANTC | 8 cut(s) | 52, 141, 452, 737, 1138, 1211, 1353, 1491 |
| HpaI | GTTAAC | 2 cut(s) | 217, 718 |
| HpaII | CCGG | 4 cut(s) | 182, 300, 817, 1452 |
| HphI | GGTGA | 7 cut(s) | 283, 466, 851, 926, 1240, 1247, 1556 |
| Hpy166II | GTNNAC | 4 cut(s) | 217, 274, 718, 1609 |
| Hpy188I | TCNGA | 6 cut(s) | 51, 57, 121, 343, 601, 1198 |
| Hpy8I | GTNNAC | 4 cut(s) | 217, 274, 718, 1609 |
| HpyCH4III | ACNGT | 2 cut(s) | 363, 478 |
| HpyCH4V | TGCA | 4 cut(s) | 293, 328, 1146, 1553 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 29, 175, 182, 184, 803 |
| HpyF3I | CTNAG | 7 cut(s) | 50, 399, 645, 1092, 1278, 1286, 1517 |
| Hsp92II | CATG | 9 cut(s) | 256, 355, 779, 991, 1273, 1303, 1315, 1360, 1580 |
| HspAI | GCGC | 3 cut(s) | 176, 185, 955 |
| Kpn2I | TCCGGA | 1 cut(s) | 299 |
| KpnI | GGTACC | 1 cut(s) | 823 |
| Ksp22I | TGATCA | 1 cut(s) | 57 |
| KspAI | GTTAAC | 2 cut(s) | 217, 718 |
| LmnI | GCTCC | 1 cut(s) | 952 |
| Lsp1109I | GCAGC | 5 cut(s) | 514, 1208, 1407, 1410, 1550 |
| LweI | GCATC | 4 cut(s) | 112, 163, 985, 1540 |
| MaeI | CTAG | 3 cut(s) | 506, 560, 1317 |
| MaeIII | GTNAC | 4 cut(s) | 412, 478, 868, 1228 |
| MflI | RGATCY | 1 cut(s) | 1304 |
| MhlI | GDGCHC | 1 cut(s) | 287 |
| MluCI | AATT | 7 cut(s) | 112, 135, 277, 602, 800, 937, 1203 |
| MlyI | GAGTC | 1 cut(s) | 61 |
| MmeI | TCCRAC | 1 cut(s) | 531 |
| MroI | TCCGGA | 1 cut(s) | 299 |
| MseI | TTAA | 3 cut(s) | 216, 537, 717 |
| MslI | CAYNNNNRTG | 2 cut(s) | 251, 429 |
| MspA1I | CMGCKG | 1 cut(s) | 1541 |
| MspCI | CTTAAG | 1 cut(s) | 536 |
| MspI | CCGG | 4 cut(s) | 182, 300, 817, 1452 |
| MspR9I | CCNGG | 2 cut(s) | 29, 1453 |
| MvaI | CCWGG | 1 cut(s) | 29 |
| MvnI | CGCG | 2 cut(s) | 99, 1484 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 29, 175, 182, 184, 803 |
| NciI | CCSGG | 1 cut(s) | 1453 |
| NlaIII | CATG | 9 cut(s) | 256, 355, 779, 991, 1273, 1303, 1315, 1360, 1580 |
| NlaIV | GGNNCC | 5 cut(s) | 304, 469, 517, 821, 1306 |
| NmeAIII | GCCGAG | 1 cut(s) | 58 |
| NmuCI | GTSAC | 3 cut(s) | 412, 478, 1228 |
| NruI | TCGCGA | 1 cut(s) | 99 |
| NsbI | TGCGCA | 1 cut(s) | 177 |
| NspI | RCATGY | 1 cut(s) | 1315 |
| PagI | TCATGA | 2 cut(s) | 775, 1269 |
| PceI | AGGCCT | 1 cut(s) | 323 |
| PciI | ACATGT | 1 cut(s) | 1311 |
| PfeI | GAWTC | 7 cut(s) | 141, 452, 737, 1138, 1211, 1353, 1491 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1349 |
| PkrI | GCNGC | 6 cut(s) | 504, 1223, 1422, 1425, 1486, 1540 |
| Ple19I | CGATCG | 1 cut(s) | 1002 |
| PleI | GAGTC | 1 cut(s) | 60 |
| PpsI | GAGTC | 1 cut(s) | 60 |
| PpuMI | RGGWCCY | 3 cut(s) | 580, 844, 1411 |
| PscI | ACATGT | 1 cut(s) | 1311 |
| Psp5II | RGGWCCY | 3 cut(s) | 580, 844, 1411 |
| Psp6I | CCWGG | 1 cut(s) | 27 |
| PspFI | CCCAGC | 1 cut(s) | 1510 |
| PspGI | CCWGG | 1 cut(s) | 27 |
| PspN4I | GGNNCC | 5 cut(s) | 304, 469, 517, 821, 1306 |
| PspPI | GGNCC | 8 cut(s) | 297, 580, 844, 886, 1377, 1411, 1513, 1573 |
| PspPPI | RGGWCCY | 3 cut(s) | 580, 844, 1411 |
| PstNI | CAGNNNCTG | 1 cut(s) | 49 |
| PsuI | RGATCY | 1 cut(s) | 1304 |
| PvuI | CGATCG | 1 cut(s) | 1002 |
| PvuII | CAGCTG | 1 cut(s) | 1541 |
| RruI | TCGCGA | 1 cut(s) | 99 |
| RsaI | GTAC | 1 cut(s) | 821 |
| RsaNI | GTAC | 1 cut(s) | 820 |
| RseI | CAYNNNNRTG | 2 cut(s) | 251, 429 |
| SalI | GTCGAC | 1 cut(s) | 1607 |
| SaqAI | TTAA | 3 cut(s) | 216, 537, 717 |
| SatI | GCNGC | 6 cut(s) | 503, 1222, 1421, 1424, 1485, 1539 |
| Sau96I | GGNCC | 8 cut(s) | 297, 580, 844, 886, 1377, 1411, 1513, 1573 |
| SchI | GAGTC | 1 cut(s) | 61 |
| ScrFI | CCNGG | 2 cut(s) | 29, 1453 |
| SduI | GDGCHC | 1 cut(s) | 287 |
| SfaNI | GCATC | 4 cut(s) | 112, 163, 985, 1540 |
| SfcI | CTRYAG | 2 cut(s) | 73, 1014 |
| SinI | GGWCC | 5 cut(s) | 297, 580, 844, 1411, 1573 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 251, 429 |
| SmlI | CTYRAG | 2 cut(s) | 536, 959 |
| SmoI | CTYRAG | 2 cut(s) | 536, 959 |
| Sse9I | AATT | 7 cut(s) | 112, 135, 277, 602, 800, 937, 1203 |
| SseBI | AGGCCT | 1 cut(s) | 323 |
| SsiI | CCGC | 4 cut(s) | 5, 11, 384, 1484 |
| SspMI | CTAG | 3 cut(s) | 506, 560, 1317 |
| StuI | AGGCCT | 1 cut(s) | 323 |
| StyD4I | CCNGG | 2 cut(s) | 27, 1451 |
| StyI | CCWWGG | 1 cut(s) | 306 |
| TaaI | ACNGT | 2 cut(s) | 363, 478 |
| TaqI | TCGA | 4 cut(s) | 139, 144, 1002, 1608 |
| TasI | AATT | 7 cut(s) | 112, 135, 277, 602, 800, 937, 1203 |
| TauI | GCSGC | 1 cut(s) | 1487 |
| TfiI | GAWTC | 7 cut(s) | 141, 452, 737, 1138, 1211, 1353, 1491 |
| Tru1I | TTAA | 3 cut(s) | 216, 537, 717 |
| Tru9I | TTAA | 3 cut(s) | 216, 537, 717 |
| TscAI | CASTG | 1 cut(s) | 936 |
| TseFI | GTSAC | 3 cut(s) | 412, 478, 1228 |
| TseI | GCWGC | 5 cut(s) | 502, 1221, 1420, 1423, 1538 |
| Tsp45I | GTSAC | 3 cut(s) | 412, 478, 1228 |
| TspGWI | ACGGA | 3 cut(s) | 170, 647, 933 |
| TspRI | CASTG | 1 cut(s) | 936 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1349 |
| Vha464I | CTTAAG | 1 cut(s) | 536 |
| VpaK11BI | GGWCC | 5 cut(s) | 297, 580, 844, 1411, 1573 |
| XapI | RAATTY | 3 cut(s) | 135, 602, 937 |
| XbaI | TCTAGA | 1 cut(s) | 559 |
| XceI | RCATGY | 1 cut(s) | 1315 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 265, 313 |
| XmiI | GTMKAC | 1 cut(s) | 1608 |
| XspI | CTAG | 3 cut(s) | 506, 560, 1317 |