Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1317 |
| AciI | CCGC | 3 cut(s) | 329, 1166, 1214 |
| AclWI | GGATC | 2 cut(s) | 13, 806 |
| AcoI | YGGCCR | 2 cut(s) | 284, 780 |
| AcsI | RAATTY | 1 cut(s) | 1513 |
| AcuI | CTGAAG | 1 cut(s) | 1044 |
| AfaI | GTAC | 2 cut(s) | 475, 1154 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 67, 863, 1438 |
| AgsI | TTSAA | 6 cut(s) | 268, 712, 733, 823, 1183, 1235 |
| AjiI | CACGTC | 1 cut(s) | 810 |
| AjnI | CCWGG | 1 cut(s) | 752 |
| AleI | CACNNNNGTG | 1 cut(s) | 329 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1412, 1444 |
| AluBI | AGCT | 7 cut(s) | 18, 50, 164, 361, 778, 1160, 1360 |
| AluI | AGCT | 7 cut(s) | 18, 50, 164, 361, 778, 1160, 1360 |
| Alw21I | GWGCWC | 1 cut(s) | 95 |
| Alw26I | GTCTC | 4 cut(s) | 435, 731, 800, 1288 |
| AlwI | GGATC | 2 cut(s) | 13, 806 |
| AoxI | GGCC | 2 cut(s) | 284, 780 |
| ApeKI | GCWGC | 3 cut(s) | 164, 407, 853 |
| ApoI | RAATTY | 1 cut(s) | 1513 |
| AseI | ATTAAT | 1 cut(s) | 692 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 150 |
| AsuC2I | CCSGG | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 4 cut(s) | 343, 950, 1261, 1499 |
| BalI | TGGCCA | 1 cut(s) | 782 |
| BbsI | GAAGAC | 2 cut(s) | 700, 1528 |
| Bbv12I | GWGCWC | 1 cut(s) | 95 |
| BbvI | GCAGC | 3 cut(s) | 151, 394, 865 |
| BccI | CCATC | 5 cut(s) | 61, 545, 624, 791, 1342 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1205, 1239 |
| BciT130I | CCWGG | 1 cut(s) | 754 |
| BclI | TGATCA | 1 cut(s) | 480 |
| BcnI | CCSGG | 1 cut(s) | 62 |
| BcoDI | GTCTC | 4 cut(s) | 435, 731, 800, 1288 |
| BfaI | CTAG | 4 cut(s) | 137, 891, 1029, 1113 |
| BfmI | CTRYAG | 3 cut(s) | 623, 851, 1449 |
| BisI | GCNGC | 3 cut(s) | 165, 408, 854 |
| BlsI | GCNGC | 3 cut(s) | 166, 409, 855 |
| Bme1390I | CCNGG | 2 cut(s) | 62, 754 |
| BmgBI | CACGTC | 1 cut(s) | 810 |
| BmiI | GGNNCC | 4 cut(s) | 631, 990, 1212, 1461 |
| BmrFI | CCNGG | 2 cut(s) | 62, 754 |
| BmsI | GCATC | 1 cut(s) | 1162 |
| BpiI | GAAGAC | 2 cut(s) | 700, 1528 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1268, 1300 |
| BpmI | CTGGAG | 2 cut(s) | 142, 1340 |
| BpuEI | CTTGAG | 4 cut(s) | 667, 1077, 1295, 1556 |
| BpuMI | CCSGG | 1 cut(s) | 62 |
| BsaI | GGTCTC | 1 cut(s) | 435 |
| BsaJI | CCNNGG | 2 cut(s) | 548, 752 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 67, 863, 1438 |
| Bse1I | ACTGG | 3 cut(s) | 457, 901, 1233 |
| Bse3DI | GCAATG | 5 cut(s) | 83, 190, 200, 1090, 1155 |
| BseBI | CCWGG | 1 cut(s) | 754 |
| BseDI | CCNNGG | 2 cut(s) | 548, 752 |
| BseGI | GGATG | 1 cut(s) | 1174 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 67, 863, 1438 |
| BseMI | GCAATG | 5 cut(s) | 83, 190, 200, 1090, 1155 |
| BseMII | CTCAG | 3 cut(s) | 501, 557, 921 |
| BseNI | ACTGG | 3 cut(s) | 457, 901, 1233 |
| BseRI | GAGGAG | 1 cut(s) | 423 |
| BseXI | GCAGC | 3 cut(s) | 151, 394, 865 |
| BseYI | CCCAGC | 1 cut(s) | 1160 |
| BshFI | GGCC | 2 cut(s) | 286, 782 |
| BsiHKAI | GWGCWC | 1 cut(s) | 95 |
| BsiSI | CCGG | 1 cut(s) | 62 |
| BslFI | GGGAC | 2 cut(s) | 312, 1522 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 67, 863, 1438 |
| BsmAI | GTCTC | 4 cut(s) | 435, 731, 800, 1288 |
| BsmBI | CGTCTC | 1 cut(s) | 800 |
| BsmFI | GGGAC | 2 cut(s) | 312, 1522 |
| BsnI | GGCC | 2 cut(s) | 286, 782 |
| Bso31I | GGTCTC | 1 cut(s) | 435 |
| Bsp1286I | GDGCHC | 1 cut(s) | 95 |
| Bsp1407I | TGTACA | 1 cut(s) | 1152 |
| Bsp143I | GATC | 4 cut(s) | 5, 480, 798, 975 |
| BspACI | CCGC | 3 cut(s) | 329, 1166, 1214 |
| BspANI | GGCC | 2 cut(s) | 286, 782 |
| BspCNI | CTCAG | 3 cut(s) | 502, 556, 920 |
| BspLI | GGNNCC | 4 cut(s) | 631, 990, 1212, 1461 |
| BspMAI | CTGCAG | 3 cut(s) | 627, 855, 1453 |
| BspPI | GGATC | 2 cut(s) | 13, 806 |
| BspTNI | GGTCTC | 1 cut(s) | 435 |
| BsrDI | GCAATG | 5 cut(s) | 83, 190, 200, 1090, 1155 |
| BsrGI | TGTACA | 1 cut(s) | 1152 |
| BsrI | ACTGG | 3 cut(s) | 457, 901, 1233 |
| BssECI | CCNNGG | 2 cut(s) | 548, 752 |
| BssMI | GATC | 4 cut(s) | 5, 480, 798, 975 |
| BssT1I | CCWWGG | 1 cut(s) | 548 |
| Bst2UI | CCWGG | 1 cut(s) | 754 |
| Bst4CI | ACNGT | 5 cut(s) | 151, 232, 404, 473, 862 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 206, 1448 |
| BstAUI | TGTACA | 1 cut(s) | 1152 |
| BstC8I | GCNNGC | 3 cut(s) | 16, 207, 780 |
| BstDEI | CTNAG | 4 cut(s) | 96, 510, 543, 907 |
| BstF5I | GGATG | 1 cut(s) | 1174 |
| BstKTI | GATC | 4 cut(s) | 8, 483, 801, 978 |
| BstMAI | GTCTC | 4 cut(s) | 435, 731, 800, 1288 |
| BstMBI | GATC | 4 cut(s) | 5, 480, 798, 975 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 206, 1172, 1448, 1468 |
| BstNI | CCWGG | 1 cut(s) | 754 |
| BstNSI | RCATGY | 2 cut(s) | 171, 766 |
| BstSCI | CCNGG | 2 cut(s) | 60, 752 |
| BstSFI | CTRYAG | 3 cut(s) | 623, 851, 1449 |
| BstV1I | GCAGC | 3 cut(s) | 151, 394, 865 |
| BstV2I | GAAGAC | 2 cut(s) | 700, 1528 |
| BstX2I | RGATCY | 1 cut(s) | 5 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 294 |
| BstYI | RGATCY | 1 cut(s) | 5 |
| BsuRI | GGCC | 2 cut(s) | 286, 782 |
| BtrI | CACGTC | 1 cut(s) | 810 |
| BtsCI | GGATG | 1 cut(s) | 1174 |
| BtsI | GCAGTG | 2 cut(s) | 324, 848 |
| BtsIMutI | CAGTG | 3 cut(s) | 324, 848, 894 |
| Cac8I | GCNNGC | 3 cut(s) | 16, 207, 780 |
| Csp6I | GTAC | 2 cut(s) | 474, 1153 |
| CviAII | CATG | 7 cut(s) | 168, 496, 668, 763, 964, 983, 1206 |
| CviQI | GTAC | 2 cut(s) | 474, 1153 |
| DdeI | CTNAG | 4 cut(s) | 96, 510, 543, 907 |
| DpnI | GATC | 4 cut(s) | 7, 482, 800, 977 |
| DpnII | GATC | 4 cut(s) | 5, 480, 798, 975 |
| DraI | TTTAAA | 1 cut(s) | 399 |
| EaeI | YGGCCR | 2 cut(s) | 284, 780 |
| EciI | GGCGGA | 1 cut(s) | 1181 |
| Eco130I | CCWWGG | 1 cut(s) | 548 |
| Eco31I | GGTCTC | 1 cut(s) | 435 |
| Eco32I | GATATC | 1 cut(s) | 1267 |
| Eco57I | CTGAAG | 1 cut(s) | 1044 |
| EcoRII | CCWGG | 1 cut(s) | 752 |
| EcoRV | GATATC | 1 cut(s) | 1267 |
| EcoT14I | CCWWGG | 1 cut(s) | 548 |
| EcoT22I | ATGCAT | 1 cut(s) | 699 |
| ErhI | CCWWGG | 1 cut(s) | 548 |
| Esp3I | CGTCTC | 1 cut(s) | 800 |
| FaeI | CATG | 7 cut(s) | 171, 499, 671, 766, 967, 986, 1209 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 350, 382, 1042, 1074 |
| FaqI | GGGAC | 2 cut(s) | 312, 1522 |
| FatI | CATG | 7 cut(s) | 167, 495, 667, 762, 963, 982, 1205 |
| FauNDI | CATATG | 2 cut(s) | 1218, 1467 |
| FbaI | TGATCA | 1 cut(s) | 480 |
| Fnu4HI | GCNGC | 3 cut(s) | 165, 408, 854 |
| FokI | GGATG | 1 cut(s) | 1181 |
| Fsp4HI | GCNGC | 3 cut(s) | 165, 408, 854 |
| FspBI | CTAG | 4 cut(s) | 137, 891, 1029, 1113 |
| GluI | GCNGC | 3 cut(s) | 165, 408, 854 |
| GsaI | CCCAGC | 1 cut(s) | 1164 |
| GsuI | CTGGAG | 2 cut(s) | 142, 1340 |
| HaeIII | GGCC | 2 cut(s) | 286, 782 |
| HapII | CCGG | 1 cut(s) | 62 |
| Hin1II | CATG | 7 cut(s) | 171, 499, 671, 766, 967, 986, 1209 |
| HincII | GTYRAC | 1 cut(s) | 1366 |
| HindII | GTYRAC | 1 cut(s) | 1366 |
| HinfI | GANTC | 5 cut(s) | 113, 651, 905, 1088, 1222 |
| HpaII | CCGG | 1 cut(s) | 62 |
| HphI | GGTGA | 4 cut(s) | 343, 950, 1261, 1499 |
| Hpy166II | GTNNAC | 2 cut(s) | 154, 1366 |
| Hpy188I | TCNGA | 5 cut(s) | 511, 910, 922, 1063, 1520 |
| Hpy188III | TCNNGA | 5 cut(s) | 159, 730, 992, 1094, 1124 |
| Hpy8I | GTNNAC | 2 cut(s) | 154, 1366 |
| HpyAV | CCTTC | 2 cut(s) | 79, 262 |
| HpyCH4III | ACNGT | 5 cut(s) | 151, 232, 404, 473, 862 |
| HpyCH4IV | ACGT | 1 cut(s) | 809 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 206, 1172, 1448, 1468 |
| HpyF3I | CTNAG | 4 cut(s) | 96, 510, 543, 907 |
| HpySE526I | ACGT | 1 cut(s) | 809 |
| Hsp92II | CATG | 7 cut(s) | 171, 499, 671, 766, 967, 986, 1209 |
| Ksp22I | TGATCA | 1 cut(s) | 480 |
| Kzo9I | GATC | 4 cut(s) | 5, 480, 798, 975 |
| LmnI | GCTCC | 3 cut(s) | 47, 994, 1459 |
| Lsp1109I | GCAGC | 3 cut(s) | 151, 394, 865 |
| LweI | GCATC | 1 cut(s) | 1162 |
| MaeI | CTAG | 4 cut(s) | 137, 891, 1029, 1113 |
| MaeII | ACGT | 1 cut(s) | 809 |
| MaeIII | GTNAC | 4 cut(s) | 251, 459, 938, 1487 |
| MalI | GATC | 4 cut(s) | 7, 482, 800, 977 |
| MboI | GATC | 4 cut(s) | 5, 480, 798, 975 |
| MboII | GAAGA | 3 cut(s) | 358, 700, 1533 |
| MflI | RGATCY | 1 cut(s) | 5 |
| MhlI | GDGCHC | 1 cut(s) | 95 |
| MlsI | TGGCCA | 1 cut(s) | 782 |
| MluNI | TGGCCA | 1 cut(s) | 782 |
| MlyI | GAGTC | 2 cut(s) | 107, 899 |
| MnlI | CCTC | 6 cut(s) | 206, 309, 444, 505, 1473, 1531 |
| Mox20I | TGGCCA | 1 cut(s) | 782 |
| Mph1103I | ATGCAT | 1 cut(s) | 699 |
| MroXI | GAANNNNTTC | 1 cut(s) | 150 |
| MscI | TGGCCA | 1 cut(s) | 782 |
| MseI | TTAA | 5 cut(s) | 227, 398, 692, 792, 948 |
| MslI | CAYNNNNRTG | 4 cut(s) | 329, 684, 702, 983 |
| Msp20I | TGGCCA | 1 cut(s) | 782 |
| MspA1I | CMGCKG | 1 cut(s) | 1360 |
| MspI | CCGG | 1 cut(s) | 62 |
| MspR9I | CCNGG | 2 cut(s) | 62, 754 |
| MvaI | CCWGG | 1 cut(s) | 754 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 206, 1172, 1448, 1468 |
| NciI | CCSGG | 1 cut(s) | 62 |
| NdeI | CATATG | 2 cut(s) | 1218, 1467 |
| NdeII | GATC | 4 cut(s) | 5, 480, 798, 975 |
| NlaIII | CATG | 7 cut(s) | 171, 499, 671, 766, 967, 986, 1209 |
| NlaIV | GGNNCC | 4 cut(s) | 631, 990, 1212, 1461 |
| NmuCI | GTSAC | 3 cut(s) | 251, 938, 1487 |
| NsiI | ATGCAT | 1 cut(s) | 699 |
| NspI | RCATGY | 2 cut(s) | 171, 766 |
| OliI | CACNNNNGTG | 1 cut(s) | 329 |
| PdmI | GAANNNNTTC | 1 cut(s) | 150 |
| PfeI | GAWTC | 3 cut(s) | 651, 1088, 1222 |
| PflFI | GACNNNGTC | 1 cut(s) | 811 |
| PfoI | TCCNGGA | 1 cut(s) | 60 |
| PkrI | GCNGC | 3 cut(s) | 166, 409, 855 |
| PleI | GAGTC | 2 cut(s) | 107, 899 |
| PpsI | GAGTC | 2 cut(s) | 107, 899 |
| PshBI | ATTAAT | 1 cut(s) | 692 |
| PsiI | TTATAA | 1 cut(s) | 1317 |
| Psp6I | CCWGG | 1 cut(s) | 752 |
| PspFI | CCCAGC | 1 cut(s) | 1160 |
| PspGI | CCWGG | 1 cut(s) | 752 |
| PspN4I | GGNNCC | 4 cut(s) | 631, 990, 1212, 1461 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1194, 1226 |
| PstI | CTGCAG | 3 cut(s) | 627, 855, 1453 |
| PsuI | RGATCY | 1 cut(s) | 5 |
| PsyI | GACNNNGTC | 1 cut(s) | 811 |
| PvuII | CAGCTG | 1 cut(s) | 1360 |
| RsaI | GTAC | 2 cut(s) | 475, 1154 |
| RsaNI | GTAC | 2 cut(s) | 474, 1153 |
| RseI | CAYNNNNRTG | 4 cut(s) | 329, 684, 702, 983 |
| SaqAI | TTAA | 5 cut(s) | 227, 398, 692, 792, 948 |
| SatI | GCNGC | 3 cut(s) | 165, 408, 854 |
| Sau3AI | GATC | 4 cut(s) | 5, 480, 798, 975 |
| SchI | GAGTC | 2 cut(s) | 107, 899 |
| ScrFI | CCNGG | 2 cut(s) | 62, 754 |
| SduI | GDGCHC | 1 cut(s) | 95 |
| SfaNI | GCATC | 1 cut(s) | 1162 |
| SfcI | CTRYAG | 3 cut(s) | 623, 851, 1449 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 329, 684, 702, 983 |
| SmlI | CTYRAG | 4 cut(s) | 646, 1092, 1274, 1535 |
| SmoI | CTYRAG | 4 cut(s) | 646, 1092, 1274, 1535 |
| SsiI | CCGC | 3 cut(s) | 329, 1166, 1214 |
| SspI | AATATT | 2 cut(s) | 716, 838 |
| SspMI | CTAG | 4 cut(s) | 137, 891, 1029, 1113 |
| StyD4I | CCNGG | 2 cut(s) | 60, 752 |
| StyI | CCWWGG | 1 cut(s) | 548 |
| TaaI | ACNGT | 5 cut(s) | 151, 232, 404, 473, 862 |
| TaiI | ACGT | 1 cut(s) | 812 |
| TaqI | TCGA | 1 cut(s) | 1225 |
| TatI | WGTACW | 2 cut(s) | 473, 1152 |
| TfiI | GAWTC | 3 cut(s) | 651, 1088, 1222 |
| Tru1I | TTAA | 5 cut(s) | 227, 398, 692, 792, 948 |
| Tru9I | TTAA | 5 cut(s) | 227, 398, 692, 792, 948 |
| TscAI | CASTG | 3 cut(s) | 331, 855, 901 |
| TseFI | GTSAC | 3 cut(s) | 251, 938, 1487 |
| TseI | GCWGC | 3 cut(s) | 164, 407, 853 |
| Tsp45I | GTSAC | 3 cut(s) | 251, 938, 1487 |
| TspRI | CASTG | 3 cut(s) | 331, 855, 901 |
| Tth111I | GACNNNGTC | 1 cut(s) | 811 |
| VspI | ATTAAT | 1 cut(s) | 692 |
| XapI | RAATTY | 1 cut(s) | 1513 |
| XceI | RCATGY | 2 cut(s) | 171, 766 |
| XmnI | GAANNNNTTC | 1 cut(s) | 150 |
| XspI | CTAG | 4 cut(s) | 137, 891, 1029, 1113 |
| Zsp2I | ATGCAT | 1 cut(s) | 699 |