MD01G1122900.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
23597176 .. 23604767
7592 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1122900.v1.1.491

Sequence Viewer

Length: 1059 bp
ATGTCTAAGTGCTCCACGGCTCAGATGCTCATTCGGCTGATGCCGTTCATGGCTGTCACCTTACTGCAATTTGGGTTCGCAGGTTTGTTCATAATTTCAAAGTTTGCTCTAAACCGTGGGATGAGCCCGCAGGTCTTCGTAGCCTATCGGCACGCTGTGGCCACTGTTTTTATAGCTCCTTTCGCCATTATCTTCGATAGGAGAGTAAGGCCAAAGATGACCTTATCTATTTTTTTTAAGATTGTTTTGCTTGGCCTCTTAGAGCCTGTAATGGACCAGAACTTGGCCTATACCGGGATGAAGCTTACAACAGCAACTGTTACATCTGCTCTGTACAATGTCCTTCCTGCTTTTGCATTCATAATGGCTTGGGTTTTCAGGCTTGAGAAGGTTAATTTGAGAAGCCTGCATAGCCAGGCAAAAATATTGGGGACCATAGTGATGGTGGGAGGAGCCATGCTTATGACTCTAATTAATGGACCCATGTTGAATTTTCCGTGGACAAGAAGAAATCCCCATCACGAATCTACAGTTTCCACAGATCATCAAGATCATATAAAGGGAGCTATCATGGTTGCAGCGGGATGTTTCTGCTGGGCTGGTTTCGTCACTCTCCAATTGATGGCGATTACACTAAAGTCATACCCTGCTGAGCTCTCCCTAACAGTTTGGATATGCTTGGCGGGCACGGTTCAAGGCTTTGCGGTGGCCCTAGCTTTCGAATGGAATAACCTTACAGCTTGGTCCATACACTTTGATTCTAAGTTGTTAGCTGTTGTTTATTGTGGAATAATGTGTTCAGGGATCGCTTTTTACATTCAGGGAATAGTAATGAAGGAAAGAGGACCTGTTTTTGTGACTGCTTTTAATCCCCTAAGCTTGATTATTGTAGCCGTTATGAGCTCCTTCATTTTAGCTGAGATCATGTACCTGGGAAGAGTTATAGGAGCAATAGTCATTGTGATTGGCCTTTATATGGTTCTATGGGGGAAAAGCAAGGATCAACTTCCATCTGAGTTAGAAAAAAATGATAACGTGGAATTGGATACGACTATTTAA

Protein Analysis

353

Amino Acids

39.0

Weight (kDa)

9.23

Isoelectric Point (pI)

33.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 20 - 156 3.2e-13 EamA-like transporter family
EamA PF00892 187 - 328 3.7e-11 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000617)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39510
fragaria_vesca FvH4_7g21440 FvH4_7g21790 FvH4_7g21820
malus_domestica MD01G1122900.v1.1 MD01G1123000.v1.1 MD02G1281100.v1.1 MD02G1281200.v1.1 MD07G1192500.v1.1 MD07G1192600.v1.1
prunus_persica Prupe.2G230500_v2.0.a1 Prupe.2G230600_v2.0.a1 Prupe.2G230600_v2.0.a1
pyrus_communis pycom01g14990 pycom07g18200 pycom07g18220
rosa_chinensis RchiOBHm_Chr1g0337261 RchiOBHm_Chr1g0337271 RchiOBHm_Chr1g0366051 RchiOBHm_Chr1g0366071 RchiOBHm_Chr1g0366081 RchiOBHm_Chr1g0366091 RchiOBHm_Chr1g0366101 RchiOBHm_Chr2g0101901 RchiOBHm_Chr7g0232741 RchiOBHm_Chr7g0232791 RchiOBHm_Chr7g0232801 RchiOBHm_Chr7g0232841
rosa_laevigata RLG00000017109 RLG00000017110 RLG00000017111 RLG00000017114 RLG00000027368 RLG00000027369 RLG00000027370 RLG00000027371 RLG00000027373 RLG00000029288
rosa_multiflora Rmu_sc0000067.1_g000001 Rmu_sc0003987.1_g000005 Rmu_sc0003987.1_g000006 Rmu_sc0003987.1_g000010 Rmu_sc0004469.1_g000021 Rmu_sc0005795.1_g000006 Rmu_sc0017606.1_g000009 Rmu_sc0026503.1_g000001
rosa_roxburghii Rroxscaffold_3G00227870 Rroxscaffold_3G00227880 Rroxscaffold_4G00290500 Rroxscaffold_4G00290510 Rroxscaffold_4G00290520 Rroxscaffold_4G00290530 Rroxscaffold_4G00290560 Rroxscaffold_4G00314630
rosa_rugosa Rorug01G0133800.1 Rorug01G0133900.1 Rorug01G0326800 Rorug01G0326900 Rorug01G0327100 Rorug01G0327200 Rorug01G0327300
rosa_samantha Rh1AG153100 Rh1AG335500 Rh1BG117400 Rh1BG122400 Rh1BG295900 Rh1BG296200 Rh1BG296400 Rh1BG296500 Rh1BG296600 Rh1BG296700 Rh2BG156100 Rh2CG156200 Rh7CG449900
rosa_wichuraiana Rw1G012530 Rw1G029740 Rw1G029750 Rw1G029760 Rw2G011770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 71, 121
AccB7I CCANNNNNTGG 2 cut(s) 283, 622
AciI CCGC 4 cut(s) 128, 581, 683, 704
AclWI GGATC 2 cut(s) 812, 1008
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 1 cut(s) 490
AdeI CACNNNGTG 1 cut(s) 157
AfaI GTAC 2 cut(s) 335, 929
AfiI CCNNNNNNNGG 4 cut(s) 283, 294, 622, 976
AgsI TTSAA 3 cut(s) 99, 490, 695
AjnI CCWGG 2 cut(s) 414, 930
Alw21I GWGCWC 3 cut(s) 14, 657, 905
AlwI GGATC 2 cut(s) 812, 1008
AlwNI CAGNNNCTG 1 cut(s) 317
AoxI GGCC 6 cut(s) 159, 209, 253, 285, 708, 967
ApeKI GCWGC 1 cut(s) 578
ApoI RAATTY 1 cut(s) 490
AseI ATTAAT 1 cut(s) 474
AspS9I GGNCC 6 cut(s) 274, 432, 479, 709, 744, 845
AsuC2I CCSGG 1 cut(s) 295
AsuHPI GGTGA 1 cut(s) 49
AsuII TTCGAA 1 cut(s) 720
AvaII GGWCC 5 cut(s) 274, 432, 479, 744, 845
BaeGI GKGCMC 1 cut(s) 689
BalI TGGCCA 1 cut(s) 161
BanII GRGCYC 3 cut(s) 128, 657, 905
BbsI GAAGAC 1 cut(s) 127
Bbv12I GWGCWC 3 cut(s) 14, 657, 905
BbvI GCAGC 1 cut(s) 590
BccI CCATC 4 cut(s) 436, 525, 616, 1018
BceAI ACGGC 3 cut(s) 28, 33, 878
BciT130I CCWGG 2 cut(s) 416, 932
BciVI GTATCC 1 cut(s) 1039
BcnI CCSGG 1 cut(s) 295
BfaI CTAG 1 cut(s) 713
BfmI CTRYAG 1 cut(s) 528
BfuAI ACCTGC 2 cut(s) 71, 121
BfuI GTATCC 1 cut(s) 1039
BisI GCNGC 1 cut(s) 579
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 1 cut(s) 580
Bme1390I CCNGG 3 cut(s) 295, 416, 932
Bme18I GGWCC 5 cut(s) 274, 432, 479, 744, 845
BmgT120I GGNCC 6 cut(s) 274, 432, 479, 709, 744, 845
BmiI GGNNCC 3 cut(s) 433, 454, 481
BmrFI CCNGG 3 cut(s) 295, 416, 932
BmsI GCATC 2 cut(s) 15, 30
BpiI GAAGAC 1 cut(s) 127
Bpu10I CCTNAGC 1 cut(s) 875
Bpu1102I GCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 1 cut(s) 720
BpuEI CTTGAG 1 cut(s) 404
BpuMI CCSGG 1 cut(s) 295
BsaJI CCNNGG 4 cut(s) 15, 115, 497, 931
BsaXI ACNNNNNCTCC 2 cut(s) 939, 969
Bsc4I CCNNNNNNNGG 4 cut(s) 283, 294, 622, 976
BseBI CCWGG 2 cut(s) 416, 932
BseDI CCNNGG 4 cut(s) 15, 115, 497, 931
BseGI GGATG 3 cut(s) 126, 303, 590
BseLI CCNNNNNNNGG 4 cut(s) 283, 294, 622, 976
BseMII CTCAG 4 cut(s) 35, 642, 909, 1005
BseRI GAGGAG 1 cut(s) 465
BseSI GKGCMC 1 cut(s) 689
BseXI GCAGC 1 cut(s) 590
BseYI CCCAGC 1 cut(s) 594
BshFI GGCC 6 cut(s) 161, 211, 255, 287, 710, 969
BsiHKAI GWGCWC 3 cut(s) 14, 657, 905
BsiSI CCGG 1 cut(s) 294
BslFI GGGAC 1 cut(s) 445
BslI CCNNNNNNNGG 4 cut(s) 283, 294, 622, 976
BsmFI GGGAC 1 cut(s) 445
BsmI GAATGC 1 cut(s) 356
BsnI GGCC 6 cut(s) 161, 211, 255, 287, 710, 969
Bsp119I TTCGAA 1 cut(s) 720
Bsp1286I GDGCHC 5 cut(s) 14, 128, 657, 689, 905
Bsp1407I TGTACA 1 cut(s) 333
Bsp143I GATC 5 cut(s) 541, 550, 804, 921, 1000
Bsp1720I GCTNAGC 1 cut(s) 651
BspACI CCGC 4 cut(s) 128, 581, 683, 704
BspANI GGCC 6 cut(s) 161, 211, 255, 287, 710, 969
BspCNI CTCAG 4 cut(s) 34, 643, 910, 1006
BspLI GGNNCC 3 cut(s) 433, 454, 481
BspMI ACCTGC 2 cut(s) 71, 121
BspPI GGATC 2 cut(s) 812, 1008
BspT104I TTCGAA 1 cut(s) 720
BsrGI TGTACA 1 cut(s) 333
BssECI CCNNGG 4 cut(s) 15, 115, 497, 931
BssMI GATC 5 cut(s) 541, 550, 804, 921, 1000
Bst2UI CCWGG 2 cut(s) 416, 932
Bst4CI ACNGT 6 cut(s) 116, 166, 319, 532, 667, 691
Bst6I CTCTTC 1 cut(s) 931
BstAUI TGTACA 1 cut(s) 333
BstBI TTCGAA 1 cut(s) 720
BstC8I GCNNGC 4 cut(s) 128, 153, 407, 685
BstDEI CTNAG 8 cut(s) 6, 21, 259, 651, 762, 875, 918, 1014
BstDSI CCRYGG 3 cut(s) 15, 115, 497
BstF5I GGATG 3 cut(s) 126, 303, 590
BstKTI GATC 5 cut(s) 544, 553, 807, 924, 1003
BstMBI GATC 5 cut(s) 541, 550, 804, 921, 1000
BstMWI GCNNNNNNNGC 4 cut(s) 34, 182, 411, 684
BstNI CCWGG 2 cut(s) 416, 932
BstSCI CCNGG 3 cut(s) 293, 414, 930
BstSFI CTRYAG 1 cut(s) 528
BstSLI GKGCMC 1 cut(s) 689
BstV1I GCAGC 1 cut(s) 590
BstV2I GAAGAC 1 cut(s) 127
BstXI CCANNNNNNTGG 1 cut(s) 442
BsuI GTATCC 1 cut(s) 1039
BsuRI GGCC 6 cut(s) 161, 211, 255, 287, 710, 969
BtgI CCRYGG 3 cut(s) 15, 115, 497
BtsCI GGATG 3 cut(s) 126, 303, 590
BtsIMutI CAGTG 1 cut(s) 162
BveI ACCTGC 2 cut(s) 71, 121
Cac8I GCNNGC 4 cut(s) 128, 153, 407, 685
CaiI CAGNNNCTG 1 cut(s) 317
Cfr13I GGNCC 6 cut(s) 274, 432, 479, 709, 744, 845
Csp6I GTAC 2 cut(s) 334, 928
CviAII CATG 5 cut(s) 49, 457, 484, 571, 925
CviQI GTAC 2 cut(s) 334, 928
DdeI CTNAG 8 cut(s) 6, 21, 259, 651, 762, 875, 918, 1014
DpnI GATC 5 cut(s) 543, 552, 806, 923, 1002
DpnII GATC 5 cut(s) 541, 550, 804, 921, 1000
DraIII CACNNNGTG 1 cut(s) 157
EaeI YGGCCR 1 cut(s) 159
Eam1104I CTCTTC 1 cut(s) 931
EarI CTCTTC 1 cut(s) 931
Ecl136II GAGCTC 2 cut(s) 655, 903
Eco24I GRGCYC 3 cut(s) 128, 657, 905
Eco47I GGWCC 5 cut(s) 274, 432, 479, 744, 845
Eco53kI GAGCTC 2 cut(s) 655, 903
EcoICRI GAGCTC 2 cut(s) 655, 903
EcoO109I RGGNCCY 1 cut(s) 845
EcoRII CCWGG 2 cut(s) 414, 930
EcoT38I GRGCYC 3 cut(s) 128, 657, 905
FaeI CATG 5 cut(s) 52, 460, 487, 574, 928
FalI AAGNNNNNCTT 2 cut(s) 206, 238
FaqI GGGAC 1 cut(s) 445
FatI CATG 5 cut(s) 48, 456, 483, 570, 924
FauI CCCGC 3 cut(s) 135, 574, 676
Fnu4HI GCNGC 1 cut(s) 579
FokI GGATG 3 cut(s) 133, 310, 597
FriOI GRGCYC 3 cut(s) 128, 657, 905
Fsp4HI GCNGC 1 cut(s) 579
FspBI CTAG 1 cut(s) 713
GluI GCNGC 1 cut(s) 579
GsaI CCCAGC 1 cut(s) 598
HaeIII GGCC 6 cut(s) 161, 211, 255, 287, 710, 969
HapII CCGG 1 cut(s) 294
Hin1II CATG 5 cut(s) 52, 460, 487, 574, 928
HindIII AAGCTT 2 cut(s) 302, 877
HinfI GANTC 3 cut(s) 466, 524, 758
HpaII CCGG 1 cut(s) 294
HphI GGTGA 1 cut(s) 49
Hpy166II GTNNAC 1 cut(s) 501
Hpy188I TCNGA 2 cut(s) 24, 1015
Hpy188III TCNNGA 2 cut(s) 521, 548
Hpy8I GTNNAC 1 cut(s) 501
HpyAV CCTTC 4 cut(s) 353, 382, 829, 916
HpyCH4III ACNGT 6 cut(s) 116, 166, 319, 532, 667, 691
HpyCH4IV ACGT 1 cut(s) 1035
HpyCH4V TGCA 4 cut(s) 67, 356, 409, 578
HpyF10VI GCNNNNNNNGC 4 cut(s) 34, 182, 411, 684
HpyF3I CTNAG 8 cut(s) 6, 21, 259, 651, 762, 875, 918, 1014
HpySE526I ACGT 1 cut(s) 1035
Hsp92II CATG 5 cut(s) 52, 460, 487, 574, 928
Kzo9I GATC 5 cut(s) 541, 550, 804, 921, 1000
LmnI GCTCC 6 cut(s) 17, 181, 452, 563, 908, 947
Lsp1109I GCAGC 1 cut(s) 590
LweI GCATC 2 cut(s) 15, 30
MaeI CTAG 1 cut(s) 713
MaeII ACGT 1 cut(s) 1035
MaeIII GTNAC 4 cut(s) 55, 319, 607, 856
MalI GATC 5 cut(s) 543, 552, 806, 923, 1002
MboI GATC 5 cut(s) 541, 550, 804, 921, 1000
MboII GAAGA 4 cut(s) 127, 184, 519, 948
MfeI CAATTG 1 cut(s) 617
MhlI GDGCHC 5 cut(s) 14, 128, 657, 689, 905
MlsI TGGCCA 1 cut(s) 161
MluCI AATT 7 cut(s) 68, 93, 394, 471, 490, 617, 1040
MluNI TGGCCA 1 cut(s) 161
MlyI GAGTC 1 cut(s) 460
MnlI CCTC 3 cut(s) 266, 443, 836
Mox20I TGGCCA 1 cut(s) 161
MscI TGGCCA 1 cut(s) 161
MseI TTAA 5 cut(s) 237, 393, 474, 867, 1057
MslI CAYNNNNRTG 2 cut(s) 440, 461
Msp20I TGGCCA 1 cut(s) 161
MspA1I CMGCKG 1 cut(s) 581
MspI CCGG 1 cut(s) 294
MspR9I CCNGG 3 cut(s) 295, 416, 932
MunI CAATTG 1 cut(s) 617
Mva1269I GAATGC 1 cut(s) 356
MvaI CCWGG 2 cut(s) 416, 932
MwoI GCNNNNNNNGC 4 cut(s) 34, 182, 411, 684
NciI CCSGG 1 cut(s) 295
NdeII GATC 5 cut(s) 541, 550, 804, 921, 1000
NlaIII CATG 5 cut(s) 52, 460, 487, 574, 928
NlaIV GGNNCC 3 cut(s) 433, 454, 481
NmuCI GTSAC 3 cut(s) 55, 607, 856
NspV TTCGAA 1 cut(s) 720
PctI GAATGC 1 cut(s) 356
PfeI GAWTC 2 cut(s) 524, 758
PflMI CCANNNNNTGG 2 cut(s) 283, 622
PkrI GCNGC 1 cut(s) 580
PleI GAGTC 1 cut(s) 460
PpsI GAGTC 1 cut(s) 460
PpuMI RGGWCCY 1 cut(s) 845
PshBI ATTAAT 1 cut(s) 474
Psp124BI GAGCTC 2 cut(s) 657, 905
Psp5II RGGWCCY 1 cut(s) 845
Psp6I CCWGG 2 cut(s) 414, 930
PspFI CCCAGC 1 cut(s) 594
PspGI CCWGG 2 cut(s) 414, 930
PspN4I GGNNCC 3 cut(s) 433, 454, 481
PspPI GGNCC 6 cut(s) 274, 432, 479, 709, 744, 845
PspPPI RGGWCCY 1 cut(s) 845
PstNI CAGNNNCTG 1 cut(s) 317
RsaI GTAC 2 cut(s) 335, 929
RsaNI GTAC 2 cut(s) 334, 928
RseI CAYNNNNRTG 2 cut(s) 440, 461
SacI GAGCTC 2 cut(s) 657, 905
SaqAI TTAA 5 cut(s) 237, 393, 474, 867, 1057
SatI GCNGC 1 cut(s) 579
Sau3AI GATC 5 cut(s) 541, 550, 804, 921, 1000
Sau96I GGNCC 6 cut(s) 274, 432, 479, 709, 744, 845
SchI GAGTC 1 cut(s) 460
ScrFI CCNGG 3 cut(s) 295, 416, 932
SduI GDGCHC 5 cut(s) 14, 128, 657, 689, 905
SfaNI GCATC 2 cut(s) 15, 30
SfcI CTRYAG 1 cut(s) 528
SfuI TTCGAA 1 cut(s) 720
SinI GGWCC 5 cut(s) 274, 432, 479, 744, 845
SmiMI CAYNNNNRTG 2 cut(s) 440, 461
SmlI CTYRAG 1 cut(s) 383
SmoI CTYRAG 1 cut(s) 383
Sse9I AATT 7 cut(s) 68, 93, 394, 471, 490, 617, 1040
SsiI CCGC 4 cut(s) 128, 581, 683, 704
SspI AATATT 1 cut(s) 426
SspMI CTAG 1 cut(s) 713
SstI GAGCTC 2 cut(s) 657, 905
StyD4I CCNGG 3 cut(s) 293, 414, 930
TaaI ACNGT 6 cut(s) 116, 166, 319, 532, 667, 691
TaiI ACGT 1 cut(s) 1038
TaqI TCGA 2 cut(s) 195, 720
TasI AATT 7 cut(s) 68, 93, 394, 471, 490, 617, 1040
TatI WGTACW 1 cut(s) 333
TfiI GAWTC 2 cut(s) 524, 758
Tru1I TTAA 5 cut(s) 237, 393, 474, 867, 1057
Tru9I TTAA 5 cut(s) 237, 393, 474, 867, 1057
TscAI CASTG 1 cut(s) 169
TseFI GTSAC 3 cut(s) 55, 607, 856
TseI GCWGC 1 cut(s) 578
Tsp45I GTSAC 3 cut(s) 55, 607, 856
TspDTI ATGAA 6 cut(s) 37, 79, 314, 349, 848, 898
TspGWI ACGGA 1 cut(s) 486
TspRI CASTG 1 cut(s) 169
Van91I CCANNNNNTGG 2 cut(s) 283, 622
VpaK11BI GGWCC 5 cut(s) 274, 432, 479, 744, 845
VspI ATTAAT 1 cut(s) 474
XapI RAATTY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 1 cut(s) 442
XspI CTAG 1 cut(s) 713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.