MD02G1281200.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
33709245 .. 33711294
2050 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1281200.v1.1.491

Sequence Viewer

Length: 993 bp
ATGTCTAAGCGCTCCAATATGGCTCAGATGCTCAATCGGGCGGTGCCGTTCATGGCTGTCACCTTCATGCAAATTGGGTTCGCAGGGATGTCCTTAATTTCAAAGTTTGCTCTAAACCATGGGATGAGCCCGCATGTCTTGGTAGTCTATCGGCATGCTGTGGCCACTGTTTTTATAGCTCCTTTTGCCATTATCTTTGATAGGCCTGTAATTGACCAGAACCTGTTCTATACCGGGATGAAGCTTACAACAGCAACTTTTACATCTGCCATGTGCAATGTTCTTCCTGCTTTTGCTTTCATAATGGCTTGGATTTTCAGGTTTGAGAAGATTAATTTGAGAAGCCTGCATAGCCTGGCAATGATATTGGGGACGATAGTGACTGTGGGAGGAGCCATGCTTATGACTCTAATTAATGGACCCATGTTGAATTTTCCGTGGACAAGAAGAAATATCCATCAAGAATCTACAGTTTCCACAGTTCATCAGGATCCCATAAAGGGAGGTATCATGCTTGCAGCTGGATGTTTCTGCTGGTCTTGTTTCATGATTCTCCAAGCGATTACTCTAAAATCATACCCTGCTGAGCTGTCCCTAACAACTTGGATATGCTTGGTGGGCACGGTTCAAGGAACTGCGGCGGCCCTAGCTTTCGAATGGAATAACCCTATAGCTTGGTCCATACACTTTGATTATAAGCTGTTAGCTGCTGTTTACAGTGGAATAATGTGTTCAGGGATCGCTTATTACATTCAGGGAATGGTAATGAAGGAAAGAGGACCTGTTTTTGTGACTGCTTTTAGTCCTCTAAGCATGATTATTACAGCCGTTATGAGCTCCTTCATATTAGCTGAGATCATGTACTTGGGAAGAGTAATTGGAGCAATGGTCATTGTGATTGGCCTCTATATGGTTCTATGGGGGAAAAGCAAGGATCAACTTCCATCCGAATTAGAAAAAGATGATAAAAGGGAATTGGCTACAAATGTTTAA

Protein Analysis

331

Amino Acids

36.58

Weight (kDa)

9.14

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 9 - 128 4.2e-06 EamA-like transporter family
EamA PF00892 167 - 306 3.7e-12 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000617)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39510
fragaria_vesca FvH4_7g21440 FvH4_7g21790 FvH4_7g21820
malus_domestica MD01G1122900.v1.1 MD01G1123000.v1.1 MD02G1281100.v1.1 MD02G1281200.v1.1 MD07G1192500.v1.1 MD07G1192600.v1.1
prunus_persica Prupe.2G230500_v2.0.a1 Prupe.2G230600_v2.0.a1 Prupe.2G230600_v2.0.a1
pyrus_communis pycom01g14990 pycom07g18200 pycom07g18220
rosa_chinensis RchiOBHm_Chr1g0337261 RchiOBHm_Chr1g0337271 RchiOBHm_Chr1g0366051 RchiOBHm_Chr1g0366071 RchiOBHm_Chr1g0366081 RchiOBHm_Chr1g0366091 RchiOBHm_Chr1g0366101 RchiOBHm_Chr2g0101901 RchiOBHm_Chr7g0232741 RchiOBHm_Chr7g0232791 RchiOBHm_Chr7g0232801 RchiOBHm_Chr7g0232841
rosa_laevigata RLG00000017109 RLG00000017110 RLG00000017111 RLG00000017114 RLG00000027368 RLG00000027369 RLG00000027370 RLG00000027371 RLG00000027373 RLG00000029288
rosa_multiflora Rmu_sc0000067.1_g000001 Rmu_sc0003987.1_g000005 Rmu_sc0003987.1_g000006 Rmu_sc0003987.1_g000010 Rmu_sc0004469.1_g000021 Rmu_sc0005795.1_g000006 Rmu_sc0017606.1_g000009 Rmu_sc0026503.1_g000001
rosa_roxburghii Rroxscaffold_3G00227870 Rroxscaffold_3G00227880 Rroxscaffold_4G00290500 Rroxscaffold_4G00290510 Rroxscaffold_4G00290520 Rroxscaffold_4G00290530 Rroxscaffold_4G00290560 Rroxscaffold_4G00314630
rosa_rugosa Rorug01G0133800.1 Rorug01G0133900.1 Rorug01G0326800 Rorug01G0326900 Rorug01G0327100 Rorug01G0327200 Rorug01G0327300
rosa_samantha Rh1AG153100 Rh1AG335500 Rh1BG117400 Rh1BG122400 Rh1BG295900 Rh1BG296200 Rh1BG296400 Rh1BG296500 Rh1BG296600 Rh1BG296700 Rh2BG156100 Rh2CG156200 Rh7CG449900
rosa_wichuraiana Rw1G012530 Rw1G029740 Rw1G029750 Rw1G029760 Rw2G011770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 696
AccB1I GGYRCC 1 cut(s) 43
AciI CCGC 4 cut(s) 41, 131, 638, 641
AclWI GGATC 4 cut(s) 485, 498, 746, 942
AcoI YGGCCR 1 cut(s) 162
AcsI RAATTY 1 cut(s) 430
AfaI GTAC 1 cut(s) 863
AfeI AGCGCT 1 cut(s) 11
AfiI CCNNNNNNNGG 2 cut(s) 500, 910
AgsI TTSAA 3 cut(s) 102, 430, 629
AjnI CCWGG 1 cut(s) 354
Alw21I GWGCWC 1 cut(s) 839
AlwI GGATC 4 cut(s) 485, 498, 746, 942
AlwNI CAGNNNCTG 1 cut(s) 223
Aor51HI AGCGCT 1 cut(s) 11
AoxI GGCC 4 cut(s) 162, 203, 642, 901
ApeKI GCWGC 2 cut(s) 518, 707
ApoI RAATTY 1 cut(s) 430
AseI ATTAAT 2 cut(s) 333, 414
Asp700I GAANNNNTTC 1 cut(s) 224
AspLEI GCGC 1 cut(s) 12
AspS9I GGNCC 4 cut(s) 419, 643, 678, 779
AsuC2I CCSGG 1 cut(s) 235
AsuHPI GGTGA 1 cut(s) 52
AsuII TTCGAA 1 cut(s) 654
AvaII GGWCC 3 cut(s) 419, 678, 779
BaeGI GKGCMC 1 cut(s) 623
BalI TGGCCA 1 cut(s) 164
BamHI GGATCC 1 cut(s) 490
BanI GGYRCC 1 cut(s) 43
BanII GRGCYC 2 cut(s) 131, 839
Bbv12I GWGCWC 1 cut(s) 839
BbvI GCAGC 2 cut(s) 530, 694
BccI CCATC 2 cut(s) 465, 952
BceAI ACGGC 2 cut(s) 31, 812
BciT130I CCWGG 1 cut(s) 356
BcnI CCSGG 1 cut(s) 235
BfaI CTAG 1 cut(s) 647
BfmI CTRYAG 2 cut(s) 468, 669
BfoI RGCGCY 1 cut(s) 13
BisI GCNGC 4 cut(s) 519, 639, 642, 708
BlpI GCTNAGC 1 cut(s) 585
BlsI GCNGC 4 cut(s) 520, 640, 643, 709
Bme1390I CCNGG 2 cut(s) 235, 356
Bme18I GGWCC 3 cut(s) 419, 678, 779
BmgT120I GGNCC 4 cut(s) 419, 643, 678, 779
BmiI GGNNCC 4 cut(s) 45, 394, 421, 492
BmrFI CCNGG 2 cut(s) 235, 356
BmsI GCATC 1 cut(s) 18
Bpu1102I GCTNAGC 1 cut(s) 585
Bpu14I TTCGAA 1 cut(s) 654
BpuMI CCSGG 1 cut(s) 235
BsaJI CCNNGG 2 cut(s) 118, 437
BsaXI ACNNNNNCTCC 2 cut(s) 873, 903
Bsc4I CCNNNNNNNGG 2 cut(s) 500, 910
Bse3DI GCAATG 3 cut(s) 283, 366, 891
BseBI CCWGG 1 cut(s) 356
BseDI CCNNGG 2 cut(s) 118, 437
BseGI GGATG 5 cut(s) 93, 129, 243, 530, 944
BseLI CCNNNNNNNGG 2 cut(s) 500, 910
BseMI GCAATG 3 cut(s) 283, 366, 891
BseMII CTCAG 3 cut(s) 38, 576, 843
BseRI GAGGAG 1 cut(s) 405
BseSI GKGCMC 1 cut(s) 623
BseXI GCAGC 2 cut(s) 530, 694
BshFI GGCC 4 cut(s) 164, 205, 644, 903
BshNI GGYRCC 1 cut(s) 43
BsiHKAI GWGCWC 1 cut(s) 839
BsiSI CCGG 1 cut(s) 234
BslFI GGGAC 2 cut(s) 385, 577
BslI CCNNNNNNNGG 2 cut(s) 500, 910
BsmFI GGGAC 2 cut(s) 385, 577
BsnI GGCC 4 cut(s) 164, 205, 644, 903
Bsp119I TTCGAA 1 cut(s) 654
Bsp1286I GDGCHC 3 cut(s) 131, 623, 839
Bsp143I GATC 4 cut(s) 490, 738, 855, 934
Bsp1720I GCTNAGC 1 cut(s) 585
Bsp19I CCATGG 1 cut(s) 118
BspACI CCGC 4 cut(s) 41, 131, 638, 641
BspANI GGCC 4 cut(s) 164, 205, 644, 903
BspCNI CTCAG 3 cut(s) 37, 577, 844
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 4 cut(s) 45, 394, 421, 492
BspPI GGATC 4 cut(s) 485, 498, 746, 942
BspT104I TTCGAA 1 cut(s) 654
BspT107I GGYRCC 1 cut(s) 43
BsrDI GCAATG 3 cut(s) 283, 366, 891
BssECI CCNNGG 2 cut(s) 118, 437
BssMI GATC 4 cut(s) 490, 738, 855, 934
BssT1I CCWWGG 1 cut(s) 118
Bst2UI CCWGG 1 cut(s) 356
Bst4CI ACNGT 6 cut(s) 169, 385, 472, 481, 625, 719
Bst6I CTCTTC 1 cut(s) 865
BstBI TTCGAA 1 cut(s) 654
BstC8I GCNNGC 4 cut(s) 131, 156, 347, 516
BstDEI CTNAG 5 cut(s) 6, 24, 585, 809, 852
BstDSI CCRYGG 2 cut(s) 118, 437
BstF5I GGATG 5 cut(s) 93, 129, 243, 530, 944
BstH2I RGCGCY 1 cut(s) 13
BstHHI GCGC 1 cut(s) 12
BstKTI GATC 4 cut(s) 493, 741, 858, 937
BstMBI GATC 4 cut(s) 490, 738, 855, 934
BstMWI GCNNNNNNNGC 4 cut(s) 185, 351, 618, 647
BstNI CCWGG 1 cut(s) 356
BstNSI RCATGY 2 cut(s) 137, 158
BstSCI CCNGG 2 cut(s) 233, 354
BstSFI CTRYAG 2 cut(s) 468, 669
BstSLI GKGCMC 1 cut(s) 623
BstV1I GCAGC 2 cut(s) 530, 694
BstX2I RGATCY 1 cut(s) 490
BstYI RGATCY 1 cut(s) 490
BsuRI GGCC 4 cut(s) 164, 205, 644, 903
BtgI CCRYGG 2 cut(s) 118, 437
BtsCI GGATG 5 cut(s) 93, 129, 243, 530, 944
BtsIMutI CAGTG 2 cut(s) 165, 724
Cac8I GCNNGC 4 cut(s) 131, 156, 347, 516
CaiI CAGNNNCTG 1 cut(s) 223
CciI TCATGA 1 cut(s) 546
CfoI GCGC 1 cut(s) 12
Cfr13I GGNCC 4 cut(s) 419, 643, 678, 779
Csp6I GTAC 1 cut(s) 862
CviQI GTAC 1 cut(s) 862
DdeI CTNAG 5 cut(s) 6, 24, 585, 809, 852
DpnI GATC 4 cut(s) 492, 740, 857, 936
DpnII GATC 4 cut(s) 490, 738, 855, 934
EaeI YGGCCR 1 cut(s) 162
Eam1104I CTCTTC 1 cut(s) 865
EarI CTCTTC 1 cut(s) 865
Ecl136II GAGCTC 1 cut(s) 837
Eco130I CCWWGG 1 cut(s) 118
Eco147I AGGCCT 1 cut(s) 205
Eco24I GRGCYC 2 cut(s) 131, 839
Eco47I GGWCC 3 cut(s) 419, 678, 779
Eco47III AGCGCT 1 cut(s) 11
Eco53kI GAGCTC 1 cut(s) 837
EcoICRI GAGCTC 1 cut(s) 837
EcoO109I RGGNCCY 1 cut(s) 779
EcoRII CCWGG 1 cut(s) 354
EcoT14I CCWWGG 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 131, 839
ErhI CCWWGG 1 cut(s) 118
FaqI GGGAC 2 cut(s) 385, 577
FauI CCCGC 1 cut(s) 138
Fnu4HI GCNGC 4 cut(s) 519, 639, 642, 708
FokI GGATG 5 cut(s) 100, 136, 250, 537, 931
FriOI GRGCYC 2 cut(s) 131, 839
Fsp4HI GCNGC 4 cut(s) 519, 639, 642, 708
FspBI CTAG 1 cut(s) 647
GlaI GCGC 1 cut(s) 11
GluI GCNGC 4 cut(s) 519, 639, 642, 708
HaeII RGCGCY 1 cut(s) 13
HaeIII GGCC 4 cut(s) 164, 205, 644, 903
HapII CCGG 1 cut(s) 234
HhaI GCGC 1 cut(s) 12
Hin6I GCGC 1 cut(s) 10
HinP1I GCGC 1 cut(s) 10
HindIII AAGCTT 1 cut(s) 242
HinfI GANTC 3 cut(s) 406, 464, 550
HpaII CCGG 1 cut(s) 234
HphI GGTGA 1 cut(s) 52
Hpy166II GTNNAC 2 cut(s) 441, 715
Hpy188I TCNGA 2 cut(s) 27, 949
Hpy188III TCNNGA 3 cut(s) 461, 488, 547
Hpy8I GTNNAC 2 cut(s) 441, 715
HpyAV CCTTC 3 cut(s) 73, 763, 850
HpyCH4III ACNGT 6 cut(s) 169, 385, 472, 481, 625, 719
HpyCH4V TGCA 4 cut(s) 70, 276, 349, 518
HpyF10VI GCNNNNNNNGC 4 cut(s) 185, 351, 618, 647
HpyF3I CTNAG 5 cut(s) 6, 24, 585, 809, 852
HspAI GCGC 1 cut(s) 10
Kzo9I GATC 4 cut(s) 490, 738, 855, 934
LmnI GCTCC 5 cut(s) 17, 184, 392, 842, 881
Lsp1109I GCAGC 2 cut(s) 530, 694
LweI GCATC 1 cut(s) 18
MaeI CTAG 1 cut(s) 647
MaeIII GTNAC 3 cut(s) 58, 379, 790
MalI GATC 4 cut(s) 492, 740, 857, 936
MboI GATC 4 cut(s) 490, 738, 855, 934
MboII GAAGA 4 cut(s) 275, 340, 459, 882
MflI RGATCY 1 cut(s) 490
MhlI GDGCHC 3 cut(s) 131, 623, 839
MlsI TGGCCA 1 cut(s) 164
MluCI AATT 9 cut(s) 72, 96, 210, 334, 411, 430, 876, 950, 974
MluNI TGGCCA 1 cut(s) 164
MlyI GAGTC 1 cut(s) 400
MnlI CCTC 5 cut(s) 383, 497, 770, 816, 914
Mox20I TGGCCA 1 cut(s) 164
MroXI GAANNNNTTC 1 cut(s) 224
MscI TGGCCA 1 cut(s) 164
MseI TTAA 4 cut(s) 95, 333, 414, 991
MslI CAYNNNNRTG 2 cut(s) 65, 401
Msp20I TGGCCA 1 cut(s) 164
MspA1I CMGCKG 1 cut(s) 521
MspI CCGG 1 cut(s) 234
MspR9I CCNGG 2 cut(s) 235, 356
MvaI CCWGG 1 cut(s) 356
MwoI GCNNNNNNNGC 4 cut(s) 185, 351, 618, 647
NciI CCSGG 1 cut(s) 235
NcoI CCATGG 1 cut(s) 118
NdeII GATC 4 cut(s) 490, 738, 855, 934
NlaIV GGNNCC 4 cut(s) 45, 394, 421, 492
NmuCI GTSAC 3 cut(s) 58, 379, 790
NspI RCATGY 2 cut(s) 137, 158
NspV TTCGAA 1 cut(s) 654
PaeI GCATGC 1 cut(s) 158
PagI TCATGA 1 cut(s) 546
PceI AGGCCT 1 cut(s) 205
PdmI GAANNNNTTC 1 cut(s) 224
PfeI GAWTC 2 cut(s) 464, 550
PkrI GCNGC 4 cut(s) 520, 640, 643, 709
PleI GAGTC 1 cut(s) 400
PpsI GAGTC 1 cut(s) 400
PpuMI RGGWCCY 1 cut(s) 779
PshBI ATTAAT 2 cut(s) 333, 414
PsiI TTATAA 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 839
Psp5II RGGWCCY 1 cut(s) 779
Psp6I CCWGG 1 cut(s) 354
PspGI CCWGG 1 cut(s) 354
PspN4I GGNNCC 4 cut(s) 45, 394, 421, 492
PspPI GGNCC 4 cut(s) 419, 643, 678, 779
PspPPI RGGWCCY 1 cut(s) 779
PstNI CAGNNNCTG 1 cut(s) 223
PsuI RGATCY 1 cut(s) 490
PvuII CAGCTG 1 cut(s) 521
RsaI GTAC 1 cut(s) 863
RsaNI GTAC 1 cut(s) 862
RseI CAYNNNNRTG 2 cut(s) 65, 401
SacI GAGCTC 1 cut(s) 839
SaqAI TTAA 4 cut(s) 95, 333, 414, 991
SatI GCNGC 4 cut(s) 519, 639, 642, 708
Sau3AI GATC 4 cut(s) 490, 738, 855, 934
Sau96I GGNCC 4 cut(s) 419, 643, 678, 779
SchI GAGTC 1 cut(s) 400
ScrFI CCNGG 2 cut(s) 235, 356
SduI GDGCHC 3 cut(s) 131, 623, 839
SfaNI GCATC 1 cut(s) 18
SfcI CTRYAG 2 cut(s) 468, 669
SfuI TTCGAA 1 cut(s) 654
SinI GGWCC 3 cut(s) 419, 678, 779
SmiMI CAYNNNNRTG 2 cut(s) 65, 401
SphI GCATGC 1 cut(s) 158
Sse9I AATT 9 cut(s) 72, 96, 210, 334, 411, 430, 876, 950, 974
SseBI AGGCCT 1 cut(s) 205
SsiI CCGC 4 cut(s) 41, 131, 638, 641
SspMI CTAG 1 cut(s) 647
SstI GAGCTC 1 cut(s) 839
StuI AGGCCT 1 cut(s) 205
StyD4I CCNGG 2 cut(s) 233, 354
StyI CCWWGG 1 cut(s) 118
TaaI ACNGT 6 cut(s) 169, 385, 472, 481, 625, 719
TaqI TCGA 1 cut(s) 654
TasI AATT 9 cut(s) 72, 96, 210, 334, 411, 430, 876, 950, 974
TatI WGTACW 1 cut(s) 861
TauI GCSGC 2 cut(s) 641, 644
TfiI GAWTC 2 cut(s) 464, 550
Tru1I TTAA 4 cut(s) 95, 333, 414, 991
Tru9I TTAA 4 cut(s) 95, 333, 414, 991
TscAI CASTG 2 cut(s) 172, 724
TseFI GTSAC 3 cut(s) 58, 379, 790
TseI GCWGC 2 cut(s) 518, 707
Tsp45I GTSAC 3 cut(s) 58, 379, 790
TspDTI ATGAA 8 cut(s) 40, 55, 254, 289, 473, 535, 782, 832
TspGWI ACGGA 1 cut(s) 426
TspRI CASTG 2 cut(s) 172, 724
VpaK11BI GGWCC 3 cut(s) 419, 678, 779
VspI ATTAAT 2 cut(s) 333, 414
XapI RAATTY 1 cut(s) 430
XceI RCATGY 2 cut(s) 137, 158
XmnI GAANNNNTTC 1 cut(s) 224
XspI CTAG 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.