Rw1G029760

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
57464151 .. 57465964
1814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G029760.1

Sequence Viewer

Length: 1071 bp
ATGTTTACGGGGTTGATCCGCCAGACAAAGCTTGTGTTAGCAGTGATTTTGGTGCAGCTCGGGTATGCTGGGCTTTCGATAATCTCTGTGTTTGCTCTAAAGAAGGGAATGAGTCCTTACACATTCATCGTGTACCGAATGGCCATTGCCACTATTGTTCTAGCTCCATTTGCATTCATTTTGGAGAGGAATTCAAGACCTCCGATGACTTGGTCCATCACTGCAAAGATAATGTTGCTGAGCCTTTTCGACCCTGTGCTTGACCAGAACCTCTACTACATGGGAATGAAGAATTCGAGTGCAACGTTCACTTCTGCAATGTGCAATATGCTGCCTGCTTTTGCATTTTGTCTAGCCTGGATTTTTAGGTTTGAGAAGGTTAGCCTTAAGAAACTGCACAGCATAGCAAAGGTCATGGGGACGATCATCACAGTTGGGGGAGCAATAGTCTTGACTCTAGTTAGAGGTCCCTCATTGTGTCTACCATGGGCCATTGAAGAACAAATTGATCCTCATCAATCTGCGCAATGCTATTCGGGTCAGGCAGACCTCGTGAAAGGAGCTCTATTTATCACAGGAGCTTGTTTCTGCTGGTCTTGGTTTGTCATTTTGCAAGCGATTACCTTAAGATCCTACCCTTGTCAGCTCTCTCTCACAGCAATGATATGCTTTTGGGGTATGGTGGAAGGAGCAATACTGGCTTTTGTAGTTGAAAGGGGACATAGTGGAGTCTGGTCCATACAATTCAACATCAAACTGGTAGCAGCATTTTATGGGGCAATGCAATCTGGTGTTGCTTATTATGTGATGGGAATGGTAGTGAAGGAAAAGGGACCTGTTTTTTACTCGGCTTTTAATCCCTTGGCCACAGTAATGGTTGCAATCCTGGGTTCCTTTGTTTTAGCAGAACAATTGTACCTTGGGAGTGTTATCGGAGCAGCTGTAATCATCATTGGTCTGTATCTCGTTCTTTGGGGAAAAGCAAAGGACCAGTCTCCTCCATCACAGAGCTGCATGATCGATGAAGTAGCACCACTAACACAAAGATTAATAGATGATCAACAATGTTAA

Protein Analysis

356

Amino Acids

39.1

Weight (kDa)

8.85

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 12 - 143 6.9e-16 EamA-like transporter family
EamA PF00892 186 - 324 2.5e-09 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000617)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39510
fragaria_vesca FvH4_7g21440 FvH4_7g21790 FvH4_7g21820
malus_domestica MD01G1122900.v1.1 MD01G1123000.v1.1 MD02G1281100.v1.1 MD02G1281200.v1.1 MD07G1192500.v1.1 MD07G1192600.v1.1
prunus_persica Prupe.2G230500_v2.0.a1 Prupe.2G230600_v2.0.a1 Prupe.2G230600_v2.0.a1
pyrus_communis pycom01g14990 pycom07g18200 pycom07g18220
rosa_chinensis RchiOBHm_Chr1g0337261 RchiOBHm_Chr1g0337271 RchiOBHm_Chr1g0366051 RchiOBHm_Chr1g0366071 RchiOBHm_Chr1g0366081 RchiOBHm_Chr1g0366091 RchiOBHm_Chr1g0366101 RchiOBHm_Chr2g0101901 RchiOBHm_Chr7g0232741 RchiOBHm_Chr7g0232791 RchiOBHm_Chr7g0232801 RchiOBHm_Chr7g0232841
rosa_laevigata RLG00000017109 RLG00000017110 RLG00000017111 RLG00000017114 RLG00000027368 RLG00000027369 RLG00000027370 RLG00000027371 RLG00000027373 RLG00000029288
rosa_multiflora Rmu_sc0000067.1_g000001 Rmu_sc0003987.1_g000005 Rmu_sc0003987.1_g000006 Rmu_sc0003987.1_g000010 Rmu_sc0004469.1_g000021 Rmu_sc0005795.1_g000006 Rmu_sc0017606.1_g000009 Rmu_sc0026503.1_g000001
rosa_roxburghii Rroxscaffold_3G00227870 Rroxscaffold_3G00227880 Rroxscaffold_4G00290500 Rroxscaffold_4G00290510 Rroxscaffold_4G00290520 Rroxscaffold_4G00290530 Rroxscaffold_4G00290560 Rroxscaffold_4G00314630
rosa_rugosa Rorug01G0133800.1 Rorug01G0133900.1 Rorug01G0326800 Rorug01G0326900 Rorug01G0327100 Rorug01G0327200 Rorug01G0327300
rosa_samantha Rh1AG153100 Rh1AG335500 Rh1BG117400 Rh1BG122400 Rh1BG295900 Rh1BG296200 Rh1BG296400 Rh1BG296500 Rh1BG296600 Rh1BG296700 Rh2BG156100 Rh2CG156200 Rh7CG449900
rosa_wichuraiana Rw1G012530 Rw1G029740 Rw1G029750 Rw1G029760 Rw2G011770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 525
AccI GTMKAC 1 cut(s) 481
AciI CCGC 1 cut(s) 19
AclI AACGTT 1 cut(s) 305
AclWI GGATC 3 cut(s) 10, 503, 624
AcoI YGGCCR 2 cut(s) 141, 864
AcsI RAATTY 2 cut(s) 190, 292
AfaI GTAC 2 cut(s) 134, 917
AflII CTTAAG 2 cut(s) 386, 625
AgsI TTSAA 4 cut(s) 195, 497, 713, 748
AjnI CCWGG 2 cut(s) 356, 885
AluBI AGCT 8 cut(s) 31, 58, 164, 563, 581, 646, 941, 1011
AluI AGCT 8 cut(s) 31, 58, 164, 563, 581, 646, 941, 1011
Alw21I GWGCWC 1 cut(s) 565
Alw26I GTCTC 1 cut(s) 999
AlwI GGATC 3 cut(s) 10, 503, 624
Ama87I CYCGRG 1 cut(s) 59
AoxI GGCC 3 cut(s) 141, 489, 864
ApeKI GCWGC 5 cut(s) 55, 331, 764, 938, 1011
ApoI RAATTY 2 cut(s) 190, 292
ArsI GACNNNNNNTTYG 2 cut(s) 977, 1009
AseI ATTAAT 1 cut(s) 1049
AspLEI GCGC 1 cut(s) 526
AspS9I GGNCC 6 cut(s) 213, 467, 489, 735, 833, 988
AvaI CYCGRG 1 cut(s) 59
AvaII GGWCC 5 cut(s) 213, 467, 735, 833, 988
BaeI ACNNNNGTAYC 2 cut(s) 899, 932
BalI TGGCCA 2 cut(s) 143, 866
BanII GRGCYC 1 cut(s) 565
BarI GAAGNNNNNNTAC 2 cut(s) 678, 710
BauI CACGAG 1 cut(s) 551
Bbv12I GWGCWC 1 cut(s) 565
BbvI GCAGC 5 cut(s) 67, 318, 776, 950, 998
BccI CCATC 3 cut(s) 224, 802, 1009
BciT130I CCWGG 2 cut(s) 358, 887
BclI TGATCA 1 cut(s) 1057
BcoDI GTCTC 1 cut(s) 999
BfaI CTAG 3 cut(s) 161, 353, 458
BfrI CTTAAG 2 cut(s) 386, 625
BisI GCNGC 5 cut(s) 56, 332, 765, 939, 1012
BlpI GCTNAGC 1 cut(s) 239
BlsI GCNGC 5 cut(s) 57, 333, 766, 940, 1013
Bme1390I CCNGG 2 cut(s) 358, 887
Bme18I GGWCC 5 cut(s) 213, 467, 735, 833, 988
BmeT110I CYCGRG 1 cut(s) 59
BmgT120I GGNCC 6 cut(s) 213, 467, 489, 735, 833, 988
BmiI GGNNCC 3 cut(s) 469, 834, 892
BmrFI CCNGG 2 cut(s) 358, 887
Bpu1102I GCTNAGC 1 cut(s) 239
Bsa29I ATCGAT 1 cut(s) 1020
BsaBI GATNNNNATC 1 cut(s) 513
BsaJI CCNNGG 4 cut(s) 485, 861, 886, 919
BsaXI ACNNNNNCTCC 4 cut(s) 432, 462, 927, 957
Bse1I ACTGG 3 cut(s) 702, 762, 991
Bse3DI GCAATG 5 cut(s) 144, 324, 533, 666, 786
Bse8I GATNNNNATC 1 cut(s) 513
BseBI CCWGG 2 cut(s) 358, 887
BseCI ATCGAT 1 cut(s) 1020
BseDI CCNNGG 4 cut(s) 485, 861, 886, 919
BseJI GATNNNNATC 1 cut(s) 513
BseMI GCAATG 5 cut(s) 144, 324, 533, 666, 786
BseMII CTCAG 1 cut(s) 230
BseNI ACTGG 3 cut(s) 702, 762, 991
BseRI GAGGAG 1 cut(s) 987
BseXI GCAGC 5 cut(s) 67, 318, 776, 950, 998
BseYI CCCAGC 1 cut(s) 68
BsgI GTGCAG 2 cut(s) 74, 380
BshFI GGCC 3 cut(s) 143, 491, 866
BshVI ATCGAT 1 cut(s) 1020
BsiHKAI GWGCWC 1 cut(s) 565
BsiHKCI CYCGRG 1 cut(s) 59
BslFI GGGAC 4 cut(s) 433, 453, 732, 846
BsmAI GTCTC 1 cut(s) 999
BsmFI GGGAC 4 cut(s) 433, 453, 732, 846
BsmI GAATGC 1 cut(s) 173
BsnI GGCC 3 cut(s) 143, 491, 866
BsoBI CYCGRG 1 cut(s) 59
Bsp1286I GDGCHC 1 cut(s) 565
Bsp143I GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
Bsp1720I GCTNAGC 1 cut(s) 239
Bsp19I CCATGG 1 cut(s) 485
BspACI CCGC 1 cut(s) 19
BspANI GGCC 3 cut(s) 143, 491, 866
BspCNI CTCAG 1 cut(s) 231
BspDI ATCGAT 1 cut(s) 1020
BspLI GGNNCC 3 cut(s) 469, 834, 892
BspPI GGATC 3 cut(s) 10, 503, 624
BspTI CTTAAG 2 cut(s) 386, 625
BsrDI GCAATG 5 cut(s) 144, 324, 533, 666, 786
BsrI ACTGG 3 cut(s) 702, 762, 991
BssECI CCNNGG 4 cut(s) 485, 861, 886, 919
BssMI GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
BssSI CACGAG 1 cut(s) 551
BssT1I CCWWGG 3 cut(s) 485, 861, 919
Bst2BI CACGAG 1 cut(s) 551
Bst2UI CCWGG 2 cut(s) 358, 887
Bst4CI ACNGT 2 cut(s) 433, 871
BstAFI CTTAAG 2 cut(s) 386, 625
BstC8I GCNNGC 2 cut(s) 336, 615
BstDEI CTNAG 1 cut(s) 239
BstDSI CCRYGG 1 cut(s) 485
BstHHI GCGC 1 cut(s) 526
BstKTI GATC 6 cut(s) 18, 426, 511, 632, 1020, 1060
BstMAI GTCTC 1 cut(s) 999
BstMBI GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
BstMWI GCNNNNNNNGC 2 cut(s) 170, 698
BstNI CCWGG 2 cut(s) 358, 887
BstSCI CCNGG 2 cut(s) 356, 885
BstV1I GCAGC 5 cut(s) 67, 318, 776, 950, 998
BstX2I RGATCY 1 cut(s) 629
BstXI CCANNNNNNTGG 1 cut(s) 874
BstYI RGATCY 1 cut(s) 629
Bsu15I ATCGAT 1 cut(s) 1020
BsuRI GGCC 3 cut(s) 143, 491, 866
BsuTUI ATCGAT 1 cut(s) 1020
BtgI CCRYGG 1 cut(s) 485
BtsI GCAGTG 2 cut(s) 48, 219
BtsIMutI CAGTG 2 cut(s) 48, 219
Cac8I GCNNGC 2 cut(s) 336, 615
CfoI GCGC 1 cut(s) 526
Cfr13I GGNCC 6 cut(s) 213, 467, 489, 735, 833, 988
ClaI ATCGAT 1 cut(s) 1020
Csp6I GTAC 2 cut(s) 133, 916
CviAII CATG 4 cut(s) 280, 415, 486, 1015
CviQI GTAC 2 cut(s) 133, 916
DdeI CTNAG 1 cut(s) 239
DpnI GATC 6 cut(s) 17, 425, 510, 631, 1019, 1059
DpnII GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
EaeI YGGCCR 2 cut(s) 141, 864
EciI GGCGGA 1 cut(s) 8
Ecl136II GAGCTC 1 cut(s) 563
Eco130I CCWWGG 3 cut(s) 485, 861, 919
Eco24I GRGCYC 1 cut(s) 565
Eco47I GGWCC 5 cut(s) 213, 467, 735, 833, 988
Eco53kI GAGCTC 1 cut(s) 563
Eco88I CYCGRG 1 cut(s) 59
EcoICRI GAGCTC 1 cut(s) 563
EcoO109I RGGNCCY 2 cut(s) 467, 833
EcoRI GAATTC 2 cut(s) 190, 292
EcoRII CCWGG 2 cut(s) 356, 885
EcoT14I CCWWGG 3 cut(s) 485, 861, 919
EcoT38I GRGCYC 1 cut(s) 565
ErhI CCWWGG 3 cut(s) 485, 861, 919
FaeI CATG 4 cut(s) 283, 418, 489, 1018
FaqI GGGAC 4 cut(s) 433, 453, 732, 846
FatI CATG 4 cut(s) 279, 414, 485, 1014
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 481
Fnu4HI GCNGC 5 cut(s) 56, 332, 765, 939, 1012
FriOI GRGCYC 1 cut(s) 565
Fsp4HI GCNGC 5 cut(s) 56, 332, 765, 939, 1012
FspBI CTAG 3 cut(s) 161, 353, 458
FspI TGCGCA 1 cut(s) 525
GlaI GCGC 1 cut(s) 525
GluI GCNGC 5 cut(s) 56, 332, 765, 939, 1012
GsaI CCCAGC 1 cut(s) 72
HaeIII GGCC 3 cut(s) 143, 491, 866
HhaI GCGC 1 cut(s) 526
Hin1II CATG 4 cut(s) 283, 418, 489, 1018
Hin6I GCGC 1 cut(s) 524
HinP1I GCGC 1 cut(s) 524
HindIII AAGCTT 1 cut(s) 29
HinfI GANTC 3 cut(s) 112, 454, 729
Hpy166II GTNNAC 4 cut(s) 6, 133, 309, 482
Hpy188I TCNGA 2 cut(s) 204, 935
Hpy188III TCNNGA 3 cut(s) 195, 451, 553
Hpy8I GTNNAC 4 cut(s) 6, 133, 309, 482
HpyAV CCTTC 4 cut(s) 97, 370, 680, 817
HpyCH4III ACNGT 2 cut(s) 433, 871
HpyCH4IV ACGT 1 cut(s) 305
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 698
HpyF3I CTNAG 1 cut(s) 239
HpySE526I ACGT 1 cut(s) 305
Hsp92II CATG 4 cut(s) 283, 418, 489, 1018
HspAI GCGC 1 cut(s) 524
Ksp22I TGATCA 1 cut(s) 1057
Kzo9I GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
LmnI GCTCC 6 cut(s) 169, 440, 560, 578, 689, 935
Lsp1109I GCAGC 5 cut(s) 67, 318, 776, 950, 998
MaeI CTAG 3 cut(s) 161, 353, 458
MaeII ACGT 1 cut(s) 305
MalI GATC 6 cut(s) 17, 425, 510, 631, 1019, 1059
MboI GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
MboII GAAGA 2 cut(s) 301, 509
MfeI CAATTG 1 cut(s) 911
MflI RGATCY 1 cut(s) 629
MhlI GDGCHC 1 cut(s) 565
MlsI TGGCCA 2 cut(s) 143, 866
MluCI AATT 5 cut(s) 190, 292, 504, 743, 911
MluNI TGGCCA 2 cut(s) 143, 866
MlyI GAGTC 3 cut(s) 121, 448, 738
MnlI CCTC 8 cut(s) 180, 210, 281, 458, 481, 522, 560, 1008
Mox20I TGGCCA 2 cut(s) 143, 866
MscI TGGCCA 2 cut(s) 143, 866
MseI TTAA 5 cut(s) 387, 626, 855, 1049, 1069
MslI CAYNNNNRTG 3 cut(s) 284, 659, 872
Msp20I TGGCCA 2 cut(s) 143, 866
MspA1I CMGCKG 1 cut(s) 941
MspCI CTTAAG 2 cut(s) 386, 625
MspR9I CCNGG 2 cut(s) 358, 887
MunI CAATTG 1 cut(s) 911
Mva1269I GAATGC 1 cut(s) 173
MvaI CCWGG 2 cut(s) 358, 887
MwoI GCNNNNNNNGC 2 cut(s) 170, 698
NcoI CCATGG 1 cut(s) 485
NdeII GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
NlaIII CATG 4 cut(s) 283, 418, 489, 1018
NlaIV GGNNCC 3 cut(s) 469, 834, 892
NmeAIII GCCGAG 1 cut(s) 827
NsbI TGCGCA 1 cut(s) 525
PcsI WCGNNNNNNNCGW 1 cut(s) 302
PctI GAATGC 1 cut(s) 173
PflFI GACNNNGTC 1 cut(s) 211
PkrI GCNGC 5 cut(s) 57, 333, 766, 940, 1013
PleI GAGTC 3 cut(s) 120, 448, 737
PpsI GAGTC 3 cut(s) 120, 448, 737
PpuMI RGGWCCY 2 cut(s) 467, 833
PshBI ATTAAT 1 cut(s) 1049
Psp124BI GAGCTC 1 cut(s) 565
Psp1406I AACGTT 1 cut(s) 305
Psp5II RGGWCCY 2 cut(s) 467, 833
Psp6I CCWGG 2 cut(s) 356, 885
PspFI CCCAGC 1 cut(s) 68
PspGI CCWGG 2 cut(s) 356, 885
PspN4I GGNNCC 3 cut(s) 469, 834, 892
PspPI GGNCC 6 cut(s) 213, 467, 489, 735, 833, 988
PspPPI RGGWCCY 2 cut(s) 467, 833
PsrI GAACNNNNNNTAC 2 cut(s) 260, 292
PsuI RGATCY 1 cut(s) 629
PsyI GACNNNGTC 1 cut(s) 211
PvuII CAGCTG 1 cut(s) 941
RsaI GTAC 2 cut(s) 134, 917
RsaNI GTAC 2 cut(s) 133, 916
RseI CAYNNNNRTG 3 cut(s) 284, 659, 872
SacI GAGCTC 1 cut(s) 565
SaqAI TTAA 5 cut(s) 387, 626, 855, 1049, 1069
SatI GCNGC 5 cut(s) 56, 332, 765, 939, 1012
Sau3AI GATC 6 cut(s) 15, 423, 508, 629, 1017, 1057
Sau96I GGNCC 6 cut(s) 213, 467, 489, 735, 833, 988
SchI GAGTC 3 cut(s) 121, 448, 738
ScrFI CCNGG 2 cut(s) 358, 887
SduI GDGCHC 1 cut(s) 565
SinI GGWCC 5 cut(s) 213, 467, 735, 833, 988
SmiMI CAYNNNNRTG 3 cut(s) 284, 659, 872
SmlI CTYRAG 2 cut(s) 386, 625
SmoI CTYRAG 2 cut(s) 386, 625
Sse9I AATT 5 cut(s) 190, 292, 504, 743, 911
SsiI CCGC 1 cut(s) 19
SspMI CTAG 3 cut(s) 161, 353, 458
SstI GAGCTC 1 cut(s) 565
StyD4I CCNGG 2 cut(s) 356, 885
StyI CCWWGG 3 cut(s) 485, 861, 919
TaaI ACNGT 2 cut(s) 433, 871
TaiI ACGT 1 cut(s) 308
TaqI TCGA 4 cut(s) 77, 249, 296, 1020
TasI AATT 5 cut(s) 190, 292, 504, 743, 911
Tru1I TTAA 5 cut(s) 387, 626, 855, 1049, 1069
Tru9I TTAA 5 cut(s) 387, 626, 855, 1049, 1069
TscAI CASTG 2 cut(s) 48, 226
TseI GCWGC 5 cut(s) 55, 331, 764, 938, 1011
TspDTI ATGAA 4 cut(s) 115, 166, 302, 1038
TspRI CASTG 2 cut(s) 48, 226
Tth111I GACNNNGTC 1 cut(s) 211
Vha464I CTTAAG 2 cut(s) 386, 625
VpaK11BI GGWCC 5 cut(s) 213, 467, 735, 833, 988
VspI ATTAAT 1 cut(s) 1049
XapI RAATTY 2 cut(s) 190, 292
XmiI GTMKAC 1 cut(s) 481
XspI CTAG 3 cut(s) 161, 353, 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.