RINT-1 / TIP-1 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NAM-associated | PF14303 | 14 - 91 | 1.1e-06 | No apical meristem-associated C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 272 |
| AcoI | YGGCCR | 1 cut(s) | 320 |
| AcsI | RAATTY | 1 cut(s) | 169 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 89 |
| AjnI | CCWGG | 1 cut(s) | 228 |
| AluBI | AGCT | 1 cut(s) | 41 |
| AluI | AGCT | 1 cut(s) | 41 |
| Alw21I | GWGCWC | 1 cut(s) | 292 |
| Alw44I | GTGCAC | 1 cut(s) | 288 |
| AlwI | GGATC | 1 cut(s) | 272 |
| AoxI | GGCC | 3 cut(s) | 224, 305, 320 |
| ApaLI | GTGCAC | 1 cut(s) | 288 |
| ApoI | RAATTY | 1 cut(s) | 169 |
| AspS9I | GGNCC | 2 cut(s) | 225, 306 |
| BaeGI | GKGCMC | 1 cut(s) | 292 |
| BalI | TGGCCA | 1 cut(s) | 322 |
| Bbv12I | GWGCWC | 1 cut(s) | 292 |
| BciT130I | CCWGG | 1 cut(s) | 230 |
| Bme1390I | CCNGG | 1 cut(s) | 230 |
| BmgT120I | GGNCC | 2 cut(s) | 225, 306 |
| BmiI | GGNNCC | 1 cut(s) | 227 |
| BmrFI | CCNGG | 1 cut(s) | 230 |
| BmsI | GCATC | 2 cut(s) | 61, 88 |
| BpuEI | CTTGAG | 1 cut(s) | 56 |
| BsaAI | YACGTR | 1 cut(s) | 287 |
| BsaJI | CCNNGG | 3 cut(s) | 83, 228, 229 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 89 |
| BseBI | CCWGG | 1 cut(s) | 230 |
| BseDI | CCNNGG | 3 cut(s) | 83, 228, 229 |
| BseGI | GGATG | 1 cut(s) | 66 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BseSI | GKGCMC | 1 cut(s) | 292 |
| Bsh1285I | CGRYCG | 1 cut(s) | 105 |
| BshFI | GGCC | 3 cut(s) | 226, 307, 322 |
| BsiEI | CGRYCG | 1 cut(s) | 105 |
| BsiHKAI | GWGCWC | 1 cut(s) | 292 |
| BslFI | GGGAC | 1 cut(s) | 256 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BsmFI | GGGAC | 1 cut(s) | 256 |
| BsnI | GGCC | 3 cut(s) | 226, 307, 322 |
| Bsp1286I | GDGCHC | 1 cut(s) | 292 |
| Bsp143I | GATC | 2 cut(s) | 102, 277 |
| BspANI | GGCC | 3 cut(s) | 226, 307, 322 |
| BspLI | GGNNCC | 1 cut(s) | 227 |
| BspPI | GGATC | 1 cut(s) | 272 |
| BssECI | CCNNGG | 3 cut(s) | 83, 228, 229 |
| BssMI | GATC | 2 cut(s) | 102, 277 |
| BssT1I | CCWWGG | 1 cut(s) | 83 |
| Bst2UI | CCWGG | 1 cut(s) | 230 |
| BstBAI | YACGTR | 1 cut(s) | 287 |
| BstF5I | GGATG | 1 cut(s) | 66 |
| BstKTI | GATC | 2 cut(s) | 105, 280 |
| BstMBI | GATC | 2 cut(s) | 102, 277 |
| BstMCI | CGRYCG | 1 cut(s) | 105 |
| BstNI | CCWGG | 1 cut(s) | 230 |
| BstSCI | CCNGG | 1 cut(s) | 228 |
| BstSLI | GKGCMC | 1 cut(s) | 292 |
| BstX2I | RGATCY | 1 cut(s) | 277 |
| BstYI | RGATCY | 1 cut(s) | 277 |
| BsuRI | GGCC | 3 cut(s) | 226, 307, 322 |
| BtsCI | GGATG | 1 cut(s) | 66 |
| Cfr13I | GGNCC | 2 cut(s) | 225, 306 |
| CviAII | CATG | 2 cut(s) | 56, 324 |
| CviJI | RGCY | 5 cut(s) | 41, 137, 226, 307, 322 |
| CviKI_1 | RGCY | 5 cut(s) | 41, 137, 226, 307, 322 |
| DpnI | GATC | 2 cut(s) | 104, 279 |
| DpnII | GATC | 2 cut(s) | 102, 277 |
| EaeI | YGGCCR | 1 cut(s) | 320 |
| Eco130I | CCWWGG | 1 cut(s) | 83 |
| EcoO109I | RGGNCCY | 1 cut(s) | 225 |
| EcoRII | CCWGG | 1 cut(s) | 228 |
| EcoT14I | CCWWGG | 1 cut(s) | 83 |
| ErhI | CCWWGG | 1 cut(s) | 83 |
| FaeI | CATG | 2 cut(s) | 59, 327 |
| FaiI | YATR | 3 cut(s) | 57, 129, 325 |
| FaqI | GGGAC | 1 cut(s) | 256 |
| FatI | CATG | 2 cut(s) | 55, 323 |
| FokI | GGATG | 1 cut(s) | 53 |
| HaeIII | GGCC | 3 cut(s) | 226, 307, 322 |
| Hin1II | CATG | 2 cut(s) | 59, 327 |
| HindIII | AAGCTT | 1 cut(s) | 39 |
| HinfI | GANTC | 1 cut(s) | 301 |
| Hpy166II | GTNNAC | 1 cut(s) | 290 |
| Hpy188I | TCNGA | 1 cut(s) | 282 |
| Hpy8I | GTNNAC | 1 cut(s) | 290 |
| HpyAV | CCTTC | 2 cut(s) | 155, 179 |
| HpyCH4IV | ACGT | 1 cut(s) | 286 |
| HpyCH4V | TGCA | 3 cut(s) | 52, 221, 290 |
| HpySE526I | ACGT | 1 cut(s) | 286 |
| Hsp92II | CATG | 2 cut(s) | 59, 327 |
| Kzo9I | GATC | 2 cut(s) | 102, 277 |
| LpnPI | CCDG | 2 cut(s) | 215, 242 |
| LweI | GCATC | 2 cut(s) | 61, 88 |
| MaeII | ACGT | 1 cut(s) | 286 |
| MalI | GATC | 2 cut(s) | 104, 279 |
| MboI | GATC | 2 cut(s) | 102, 277 |
| MboII | GAAGA | 2 cut(s) | 129, 204 |
| MflI | RGATCY | 1 cut(s) | 277 |
| MhlI | GDGCHC | 1 cut(s) | 292 |
| MlsI | TGGCCA | 1 cut(s) | 322 |
| MluCI | AATT | 3 cut(s) | 6, 169, 293 |
| MluNI | TGGCCA | 1 cut(s) | 322 |
| MnlI | CCTC | 1 cut(s) | 80 |
| Mox20I | TGGCCA | 1 cut(s) | 322 |
| MscI | TGGCCA | 1 cut(s) | 322 |
| MseI | TTAA | 2 cut(s) | 45, 297 |
| Msp20I | TGGCCA | 1 cut(s) | 322 |
| MspR9I | CCNGG | 1 cut(s) | 230 |
| MvaI | CCWGG | 1 cut(s) | 230 |
| NdeII | GATC | 2 cut(s) | 102, 277 |
| NlaIII | CATG | 2 cut(s) | 59, 327 |
| NlaIV | GGNNCC | 1 cut(s) | 227 |
| PasI | CCCWGGG | 1 cut(s) | 229 |
| PfeI | GAWTC | 1 cut(s) | 301 |
| Ple19I | CGATCG | 1 cut(s) | 105 |
| Ppu21I | YACGTR | 1 cut(s) | 287 |
| Psp6I | CCWGG | 1 cut(s) | 228 |
| PspGI | CCWGG | 1 cut(s) | 228 |
| PspN4I | GGNNCC | 1 cut(s) | 227 |
| PspPI | GGNCC | 2 cut(s) | 225, 306 |
| PsuI | RGATCY | 1 cut(s) | 277 |
| PvuI | CGATCG | 1 cut(s) | 105 |
| SaqAI | TTAA | 2 cut(s) | 45, 297 |
| Sau3AI | GATC | 2 cut(s) | 102, 277 |
| Sau96I | GGNCC | 2 cut(s) | 225, 306 |
| ScrFI | CCNGG | 1 cut(s) | 230 |
| SduI | GDGCHC | 1 cut(s) | 292 |
| SetI | ASST | 5 cut(s) | 43, 89, 166, 190, 289 |
| SfaNI | GCATC | 2 cut(s) | 61, 88 |
| SmlI | CTYRAG | 1 cut(s) | 71 |
| SmoI | CTYRAG | 1 cut(s) | 71 |
| Sse9I | AATT | 3 cut(s) | 6, 169, 293 |
| StyD4I | CCNGG | 1 cut(s) | 228 |
| StyI | CCWWGG | 1 cut(s) | 83 |
| TaiI | ACGT | 1 cut(s) | 289 |
| TaqI | TCGA | 1 cut(s) | 105 |
| TasI | AATT | 3 cut(s) | 6, 169, 293 |
| TfiI | GAWTC | 1 cut(s) | 301 |
| Tru1I | TTAA | 2 cut(s) | 45, 297 |
| Tru9I | TTAA | 2 cut(s) | 45, 297 |
| TspDTI | ATGAA | 3 cut(s) | 116, 174, 198 |
| VneI | GTGCAC | 1 cut(s) | 288 |
| XapI | RAATTY | 1 cut(s) | 169 |