RINT-1 / TIP-1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 179 |
| AccB1I | GGYRCC | 1 cut(s) | 26 |
| AccI | GTMKAC | 1 cut(s) | 243 |
| AclWI | GGATC | 1 cut(s) | 323 |
| AcoI | YGGCCR | 1 cut(s) | 417 |
| AcsI | RAATTY | 2 cut(s) | 220, 534 |
| AfaI | GTAC | 1 cut(s) | 455 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 140 |
| AluBI | AGCT | 1 cut(s) | 92 |
| AluI | AGCT | 1 cut(s) | 92 |
| Alw21I | GWGCWC | 1 cut(s) | 343 |
| Alw44I | GTGCAC | 1 cut(s) | 339 |
| AlwI | GGATC | 1 cut(s) | 323 |
| Ama87I | CYCGRG | 1 cut(s) | 280 |
| AoxI | GGCC | 3 cut(s) | 275, 402, 417 |
| ApaLI | GTGCAC | 1 cut(s) | 339 |
| ApoI | RAATTY | 2 cut(s) | 220, 534 |
| AspS9I | GGNCC | 2 cut(s) | 276, 403 |
| AsuC2I | CCSGG | 2 cut(s) | 281, 282 |
| AsuHPI | GGTGA | 1 cut(s) | 53 |
| AvaI | CYCGRG | 1 cut(s) | 280 |
| BaeGI | GKGCMC | 1 cut(s) | 343 |
| BalI | TGGCCA | 1 cut(s) | 419 |
| BanI | GGYRCC | 1 cut(s) | 26 |
| BanII | GRGCYC | 1 cut(s) | 257 |
| BbsI | GAAGAC | 1 cut(s) | 483 |
| Bbv12I | GWGCWC | 1 cut(s) | 343 |
| BclI | TGATCA | 1 cut(s) | 468 |
| BcnI | CCSGG | 2 cut(s) | 281, 282 |
| BfaI | CTAG | 1 cut(s) | 15 |
| Bme1390I | CCNGG | 2 cut(s) | 281, 282 |
| BmeT110I | CYCGRG | 1 cut(s) | 280 |
| BmgT120I | GGNCC | 2 cut(s) | 276, 403 |
| BmiI | GGNNCC | 3 cut(s) | 28, 145, 278 |
| BmrFI | CCNGG | 2 cut(s) | 281, 282 |
| BmsI | GCATC | 2 cut(s) | 112, 139 |
| BpiI | GAAGAC | 1 cut(s) | 483 |
| BpmI | CTGGAG | 1 cut(s) | 480 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| BpuMI | CCSGG | 2 cut(s) | 281, 282 |
| BsaAI | YACGTR | 2 cut(s) | 338, 518 |
| BsaJI | CCNNGG | 4 cut(s) | 134, 272, 279, 280 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 140 |
| Bse1I | ACTGG | 1 cut(s) | 379 |
| BseDI | CCNNGG | 4 cut(s) | 134, 272, 279, 280 |
| BseGI | GGATG | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseMII | CTCAG | 1 cut(s) | 45 |
| BseNI | ACTGG | 1 cut(s) | 379 |
| BseSI | GKGCMC | 1 cut(s) | 343 |
| BshFI | GGCC | 3 cut(s) | 277, 404, 419 |
| BshNI | GGYRCC | 1 cut(s) | 26 |
| BsiHKAI | GWGCWC | 1 cut(s) | 343 |
| BsiHKCI | CYCGRG | 1 cut(s) | 280 |
| BsiSI | CCGG | 1 cut(s) | 281 |
| BslFI | GGGAC | 1 cut(s) | 307 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BsmFI | GGGAC | 1 cut(s) | 307 |
| BsmI | GAATGC | 1 cut(s) | 553 |
| BsnI | GGCC | 3 cut(s) | 277, 404, 419 |
| BsoBI | CYCGRG | 1 cut(s) | 280 |
| Bsp1286I | GDGCHC | 2 cut(s) | 257, 343 |
| Bsp143I | GATC | 2 cut(s) | 328, 468 |
| BspANI | GGCC | 3 cut(s) | 277, 404, 419 |
| BspCNI | CTCAG | 1 cut(s) | 44 |
| BspLI | GGNNCC | 3 cut(s) | 28, 145, 278 |
| BspPI | GGATC | 1 cut(s) | 323 |
| BspT107I | GGYRCC | 1 cut(s) | 26 |
| BsrI | ACTGG | 1 cut(s) | 379 |
| BssECI | CCNNGG | 4 cut(s) | 134, 272, 279, 280 |
| BssMI | GATC | 2 cut(s) | 328, 468 |
| BssT1I | CCWWGG | 1 cut(s) | 272 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 347 |
| BstBAI | YACGTR | 2 cut(s) | 338, 518 |
| BstC8I | GCNNGC | 1 cut(s) | 352 |
| BstDEI | CTNAG | 1 cut(s) | 31 |
| BstF5I | GGATG | 1 cut(s) | 117 |
| BstKTI | GATC | 2 cut(s) | 331, 471 |
| BstMBI | GATC | 2 cut(s) | 328, 468 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 347 |
| BstNSI | RCATGY | 1 cut(s) | 13 |
| BstSCI | CCNGG | 2 cut(s) | 279, 280 |
| BstSLI | GKGCMC | 1 cut(s) | 343 |
| BstV2I | GAAGAC | 1 cut(s) | 483 |
| BstX2I | RGATCY | 1 cut(s) | 328 |
| BstYI | RGATCY | 1 cut(s) | 328 |
| BsuRI | GGCC | 3 cut(s) | 277, 404, 419 |
| BtsCI | GGATG | 1 cut(s) | 117 |
| BtsIMutI | CAGTG | 1 cut(s) | 386 |
| Cac8I | GCNNGC | 1 cut(s) | 352 |
| Cfr13I | GGNCC | 2 cut(s) | 276, 403 |
| Cfr9I | CCCGGG | 1 cut(s) | 280 |
| Csp6I | GTAC | 1 cut(s) | 454 |
| CviAII | CATG | 4 cut(s) | 10, 107, 421, 472 |
| CviJI | RGCY | 6 cut(s) | 92, 187, 255, 277, 404, 419 |
| CviKI_1 | RGCY | 6 cut(s) | 92, 187, 255, 277, 404, 419 |
| CviQI | GTAC | 1 cut(s) | 454 |
| DdeI | CTNAG | 1 cut(s) | 31 |
| DpnI | GATC | 2 cut(s) | 330, 470 |
| DpnII | GATC | 2 cut(s) | 328, 468 |
| EaeI | YGGCCR | 1 cut(s) | 417 |
| Eco130I | CCWWGG | 1 cut(s) | 272 |
| Eco24I | GRGCYC | 1 cut(s) | 257 |
| Eco88I | CYCGRG | 1 cut(s) | 280 |
| EcoO109I | RGGNCCY | 1 cut(s) | 276 |
| EcoT14I | CCWWGG | 1 cut(s) | 272 |
| EcoT38I | GRGCYC | 1 cut(s) | 257 |
| ErhI | CCWWGG | 1 cut(s) | 272 |
| FaeI | CATG | 4 cut(s) | 13, 110, 424, 475 |
| FaiI | YATR | 6 cut(s) | 11, 108, 179, 422, 473, 563 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 497, 529 |
| FaqI | GGGAC | 1 cut(s) | 307 |
| FatI | CATG | 4 cut(s) | 9, 106, 420, 471 |
| FbaI | TGATCA | 1 cut(s) | 468 |
| FblI | GTMKAC | 1 cut(s) | 243 |
| FokI | GGATG | 1 cut(s) | 104 |
| FriOI | GRGCYC | 1 cut(s) | 257 |
| FspBI | CTAG | 1 cut(s) | 15 |
| GsuI | CTGGAG | 1 cut(s) | 480 |
| HaeIII | GGCC | 3 cut(s) | 277, 404, 419 |
| HapII | CCGG | 1 cut(s) | 281 |
| Hin1II | CATG | 4 cut(s) | 13, 110, 424, 475 |
| HincII | GTYRAC | 3 cut(s) | 7, 244, 389 |
| HindII | GTYRAC | 3 cut(s) | 7, 244, 389 |
| HindIII | AAGCTT | 1 cut(s) | 90 |
| HinfI | GANTC | 1 cut(s) | 398 |
| HpaII | CCGG | 1 cut(s) | 281 |
| HphI | GGTGA | 1 cut(s) | 53 |
| Hpy166II | GTNNAC | 4 cut(s) | 7, 244, 341, 389 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 135 |
| Hpy188III | TCNNGA | 1 cut(s) | 497 |
| Hpy8I | GTNNAC | 4 cut(s) | 7, 244, 341, 389 |
| HpyAV | CCTTC | 6 cut(s) | 15, 206, 230, 418, 425, 537 |
| HpyCH4IV | ACGT | 2 cut(s) | 337, 517 |
| HpyCH4V | TGCA | 2 cut(s) | 103, 341 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 347 |
| HpyF3I | CTNAG | 1 cut(s) | 31 |
| HpySE526I | ACGT | 2 cut(s) | 337, 517 |
| Hsp92II | CATG | 4 cut(s) | 13, 110, 424, 475 |
| Ksp22I | TGATCA | 1 cut(s) | 468 |
| Kzo9I | GATC | 2 cut(s) | 328, 468 |
| LmnI | GCTCC | 1 cut(s) | 442 |
| LpnPI | CCDG | 4 cut(s) | 294, 336, 392, 510 |
| LweI | GCATC | 2 cut(s) | 112, 139 |
| MaeI | CTAG | 1 cut(s) | 15 |
| MaeII | ACGT | 2 cut(s) | 337, 517 |
| MaeIII | GTNAC | 1 cut(s) | 41 |
| MalI | GATC | 2 cut(s) | 330, 470 |
| MboI | GATC | 2 cut(s) | 328, 468 |
| MboII | GAAGA | 6 cut(s) | 179, 255, 407, 440, 488, 517 |
| MflI | RGATCY | 1 cut(s) | 328 |
| MhlI | GDGCHC | 2 cut(s) | 257, 343 |
| MlsI | TGGCCA | 1 cut(s) | 419 |
| MluCI | AATT | 6 cut(s) | 36, 57, 220, 344, 463, 534 |
| MluNI | TGGCCA | 1 cut(s) | 419 |
| MnlI | CCTC | 5 cut(s) | 40, 129, 131, 491, 495 |
| Mox20I | TGGCCA | 1 cut(s) | 419 |
| MscI | TGGCCA | 1 cut(s) | 419 |
| MseI | TTAA | 2 cut(s) | 96, 568 |
| Msp20I | TGGCCA | 1 cut(s) | 419 |
| MspI | CCGG | 1 cut(s) | 281 |
| MspR9I | CCNGG | 2 cut(s) | 281, 282 |
| Mva1269I | GAATGC | 1 cut(s) | 553 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 347 |
| NciI | CCSGG | 2 cut(s) | 281, 282 |
| NdeII | GATC | 2 cut(s) | 328, 468 |
| NlaIII | CATG | 4 cut(s) | 13, 110, 424, 475 |
| NlaIV | GGNNCC | 3 cut(s) | 28, 145, 278 |
| NmuCI | GTSAC | 1 cut(s) | 41 |
| NspI | RCATGY | 1 cut(s) | 13 |
| PctI | GAATGC | 1 cut(s) | 553 |
| PfeI | GAWTC | 1 cut(s) | 398 |
| Ppu21I | YACGTR | 2 cut(s) | 338, 518 |
| PsiI | TTATAA | 1 cut(s) | 179 |
| PspN4I | GGNNCC | 3 cut(s) | 28, 145, 278 |
| PspPI | GGNCC | 2 cut(s) | 276, 403 |
| PsuI | RGATCY | 1 cut(s) | 328 |
| RsaI | GTAC | 1 cut(s) | 455 |
| RsaNI | GTAC | 1 cut(s) | 454 |
| SalI | GTCGAC | 1 cut(s) | 242 |
| SaqAI | TTAA | 2 cut(s) | 96, 568 |
| Sau3AI | GATC | 2 cut(s) | 328, 468 |
| Sau96I | GGNCC | 2 cut(s) | 276, 403 |
| ScrFI | CCNGG | 2 cut(s) | 281, 282 |
| SduI | GDGCHC | 2 cut(s) | 257, 343 |
| SetI | ASST | 8 cut(s) | 94, 140, 217, 241, 340, 455, 483, 520 |
| SfaNI | GCATC | 2 cut(s) | 112, 139 |
| SmaI | CCCGGG | 1 cut(s) | 282 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| Sse9I | AATT | 6 cut(s) | 36, 57, 220, 344, 463, 534 |
| SspI | AATATT | 1 cut(s) | 411 |
| SspMI | CTAG | 1 cut(s) | 15 |
| StyD4I | CCNGG | 2 cut(s) | 279, 280 |
| StyI | CCWWGG | 1 cut(s) | 272 |
| TaiI | ACGT | 2 cut(s) | 340, 520 |
| TaqI | TCGA | 2 cut(s) | 243, 483 |
| TasI | AATT | 6 cut(s) | 36, 57, 220, 344, 463, 534 |
| TfiI | GAWTC | 1 cut(s) | 398 |
| Tru1I | TTAA | 2 cut(s) | 96, 568 |
| Tru9I | TTAA | 2 cut(s) | 96, 568 |
| TscAI | CASTG | 1 cut(s) | 386 |
| TseFI | GTSAC | 1 cut(s) | 41 |
| Tsp45I | GTSAC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 4 cut(s) | 197, 225, 249, 437 |
| TspMI | CCCGGG | 1 cut(s) | 280 |
| TspRI | CASTG | 1 cut(s) | 386 |
| VneI | GTGCAC | 1 cut(s) | 339 |
| XapI | RAATTY | 2 cut(s) | 220, 534 |
| XceI | RCATGY | 1 cut(s) | 13 |
| XmaI | CCCGGG | 1 cut(s) | 280 |
| XmiI | GTMKAC | 1 cut(s) | 243 |
| XspI | CTAG | 1 cut(s) | 15 |