ribosomal small subunit assembly
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 469 |
| AccB1I | GGYRCC | 1 cut(s) | 500 |
| AccI | GTMKAC | 1 cut(s) | 610 |
| AciI | CCGC | 1 cut(s) | 603 |
| AclWI | GGATC | 1 cut(s) | 77 |
| AcsI | RAATTY | 5 cut(s) | 117, 130, 157, 215, 259 |
| AcuI | CTGAAG | 1 cut(s) | 545 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 58 |
| AflIII | ACRYGT | 1 cut(s) | 144 |
| AgsI | TTSAA | 8 cut(s) | 137, 156, 274, 300, 315, 335, 543, 574 |
| AleI | CACNNNNGTG | 1 cut(s) | 509 |
| AlwI | GGATC | 1 cut(s) | 77 |
| AoxI | GGCC | 5 cut(s) | 43, 60, 87, 188, 339 |
| ApaI | GGGCCC | 1 cut(s) | 91 |
| ApeKI | GCWGC | 1 cut(s) | 599 |
| ApoI | RAATTY | 5 cut(s) | 117, 130, 157, 215, 259 |
| AspLEI | GCGC | 1 cut(s) | 626 |
| AspS9I | GGNCC | 4 cut(s) | 87, 88, 188, 369 |
| AsuHPI | GGTGA | 1 cut(s) | 257 |
| AsuII | TTCGAA | 2 cut(s) | 33, 520 |
| AvaII | GGWCC | 1 cut(s) | 369 |
| AxyI | CCTNAGG | 1 cut(s) | 40 |
| BaeGI | GKGCMC | 1 cut(s) | 91 |
| BanI | GGYRCC | 1 cut(s) | 500 |
| BanII | GRGCYC | 1 cut(s) | 91 |
| BauI | CACGAG | 1 cut(s) | 527 |
| BbvI | GCAGC | 1 cut(s) | 611 |
| BccI | CCATC | 3 cut(s) | 54, 402, 540 |
| BciVI | GTATCC | 1 cut(s) | 318 |
| BfoI | RGCGCY | 1 cut(s) | 627 |
| BfuI | GTATCC | 1 cut(s) | 318 |
| BisI | GCNGC | 2 cut(s) | 600, 603 |
| BlsI | GCNGC | 2 cut(s) | 601, 604 |
| Bme18I | GGWCC | 1 cut(s) | 369 |
| BmgT120I | GGNCC | 4 cut(s) | 87, 88, 188, 369 |
| BmiI | GGNNCC | 4 cut(s) | 89, 90, 371, 502 |
| BmsI | GCATC | 1 cut(s) | 592 |
| BpmI | CTGGAG | 2 cut(s) | 131, 492 |
| Bpu14I | TTCGAA | 2 cut(s) | 33, 520 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 33 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 58 |
| Bse1I | ACTGG | 2 cut(s) | 114, 509 |
| Bse21I | CCTNAGG | 1 cut(s) | 40 |
| Bse3DI | GCAATG | 1 cut(s) | 357 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 58 |
| BseMI | GCAATG | 1 cut(s) | 357 |
| BseNI | ACTGG | 2 cut(s) | 114, 509 |
| BseSI | GKGCMC | 1 cut(s) | 91 |
| BseXI | GCAGC | 1 cut(s) | 611 |
| BshFI | GGCC | 5 cut(s) | 45, 62, 89, 190, 341 |
| BshNI | GGYRCC | 1 cut(s) | 500 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 58 |
| BsnI | GGCC | 5 cut(s) | 45, 62, 89, 190, 341 |
| Bsp119I | TTCGAA | 2 cut(s) | 33, 520 |
| Bsp120I | GGGCCC | 1 cut(s) | 87 |
| Bsp1286I | GDGCHC | 1 cut(s) | 91 |
| Bsp143I | GATC | 1 cut(s) | 69 |
| BspACI | CCGC | 1 cut(s) | 603 |
| BspANI | GGCC | 5 cut(s) | 45, 62, 89, 190, 341 |
| BspLI | GGNNCC | 4 cut(s) | 89, 90, 371, 502 |
| BspPI | GGATC | 1 cut(s) | 77 |
| BspT104I | TTCGAA | 2 cut(s) | 33, 520 |
| BspT107I | GGYRCC | 1 cut(s) | 500 |
| BsrDI | GCAATG | 1 cut(s) | 357 |
| BsrI | ACTGG | 2 cut(s) | 114, 509 |
| BssMI | GATC | 1 cut(s) | 69 |
| BssSI | CACGAG | 1 cut(s) | 527 |
| Bst2BI | CACGAG | 1 cut(s) | 527 |
| Bst4CI | ACNGT | 1 cut(s) | 455 |
| BstBI | TTCGAA | 2 cut(s) | 33, 520 |
| BstDEI | CTNAG | 3 cut(s) | 40, 81, 484 |
| BstH2I | RGCGCY | 1 cut(s) | 627 |
| BstHHI | GCGC | 1 cut(s) | 626 |
| BstKTI | GATC | 1 cut(s) | 72 |
| BstMBI | GATC | 1 cut(s) | 69 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 347, 596 |
| BstSLI | GKGCMC | 1 cut(s) | 91 |
| BstV1I | GCAGC | 1 cut(s) | 611 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 148 |
| Bsu36I | CCTNAGG | 1 cut(s) | 40 |
| BsuI | GTATCC | 1 cut(s) | 318 |
| BsuRI | GGCC | 5 cut(s) | 45, 62, 89, 190, 341 |
| BtsIMutI | CAGTG | 1 cut(s) | 516 |
| CfoI | GCGC | 1 cut(s) | 626 |
| Cfr13I | GGNCC | 4 cut(s) | 87, 88, 188, 369 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 515, 550 |
| CviAII | CATG | 1 cut(s) | 614 |
| CviJI | RGCY | 9 cut(s) | 38, 45, 62, 89, 190, 341, 401, 565, 602 |
| CviKI_1 | RGCY | 9 cut(s) | 38, 45, 62, 89, 190, 341, 401, 565, 602 |
| DdeI | CTNAG | 3 cut(s) | 40, 81, 484 |
| DpnI | GATC | 1 cut(s) | 71 |
| DpnII | GATC | 1 cut(s) | 69 |
| DraI | TTTAAA | 2 cut(s) | 214, 667 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 469 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 469 |
| Eco24I | GRGCYC | 1 cut(s) | 91 |
| Eco32I | GATATC | 1 cut(s) | 6 |
| Eco47I | GGWCC | 1 cut(s) | 369 |
| Eco57I | CTGAAG | 1 cut(s) | 545 |
| Eco81I | CCTNAGG | 1 cut(s) | 40 |
| EcoO109I | RGGNCCY | 2 cut(s) | 87, 88 |
| EcoRI | GAATTC | 1 cut(s) | 117 |
| EcoRV | GATATC | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 91 |
| FaeI | CATG | 1 cut(s) | 617 |
| FaiI | YATR | 9 cut(s) | 11, 24, 176, 234, 282, 405, 495, 615, 680 |
| FatI | CATG | 1 cut(s) | 613 |
| FblI | GTMKAC | 1 cut(s) | 610 |
| Fnu4HI | GCNGC | 2 cut(s) | 600, 603 |
| FriOI | GRGCYC | 1 cut(s) | 91 |
| Fsp4HI | GCNGC | 2 cut(s) | 600, 603 |
| GlaI | GCGC | 1 cut(s) | 625 |
| GluI | GCNGC | 2 cut(s) | 600, 603 |
| GsuI | CTGGAG | 2 cut(s) | 131, 492 |
| HaeII | RGCGCY | 1 cut(s) | 627 |
| HaeIII | GGCC | 5 cut(s) | 45, 62, 89, 190, 341 |
| HhaI | GCGC | 1 cut(s) | 626 |
| Hin1II | CATG | 1 cut(s) | 617 |
| Hin6I | GCGC | 1 cut(s) | 624 |
| HinP1I | GCGC | 1 cut(s) | 624 |
| HinfI | GANTC | 4 cut(s) | 77, 137, 152, 463 |
| HphI | GGTGA | 1 cut(s) | 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 611 |
| Hpy188I | TCNGA | 1 cut(s) | 102 |
| Hpy188III | TCNNGA | 1 cut(s) | 543 |
| Hpy8I | GTNNAC | 1 cut(s) | 611 |
| Hpy99I | CGWCG | 1 cut(s) | 641 |
| HpyAV | CCTTC | 4 cut(s) | 52, 321, 349, 491 |
| HpyCH4III | ACNGT | 1 cut(s) | 455 |
| HpyCH4IV | ACGT | 1 cut(s) | 146 |
| HpyCH4V | TGCA | 2 cut(s) | 350, 396 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 347, 596 |
| HpyF3I | CTNAG | 3 cut(s) | 40, 81, 484 |
| HpySE526I | ACGT | 1 cut(s) | 146 |
| Hsp92II | CATG | 1 cut(s) | 617 |
| HspAI | GCGC | 1 cut(s) | 624 |
| Kzo9I | GATC | 1 cut(s) | 69 |
| LpnPI | CCDG | 4 cut(s) | 76, 95, 480, 522 |
| Lsp1109I | GCAGC | 1 cut(s) | 611 |
| LweI | GCATC | 1 cut(s) | 592 |
| MaeII | ACGT | 1 cut(s) | 146 |
| MalI | GATC | 1 cut(s) | 71 |
| MboI | GATC | 1 cut(s) | 69 |
| MboII | GAAGA | 4 cut(s) | 392, 531, 551, 562 |
| MhlI | GDGCHC | 1 cut(s) | 91 |
| MlyI | GAGTC | 1 cut(s) | 457 |
| MmeI | TCCRAC | 3 cut(s) | 76, 129, 165 |
| MnlI | CCTC | 6 cut(s) | 59, 78, 106, 171, 352, 423 |
| MseI | TTAA | 6 cut(s) | 123, 213, 324, 666, 674, 689 |
| MslI | CAYNNNNRTG | 2 cut(s) | 509, 618 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 347, 596 |
| NdeII | GATC | 1 cut(s) | 69 |
| NlaIII | CATG | 1 cut(s) | 617 |
| NlaIV | GGNNCC | 4 cut(s) | 89, 90, 371, 502 |
| NspV | TTCGAA | 2 cut(s) | 33, 520 |
| OliI | CACNNNNGTG | 1 cut(s) | 509 |
| PfeI | GAWTC | 3 cut(s) | 77, 137, 152 |
| PkrI | GCNGC | 2 cut(s) | 601, 604 |
| PleI | GAGTC | 1 cut(s) | 457 |
| PpsI | GAGTC | 1 cut(s) | 457 |
| PspN4I | GGNNCC | 4 cut(s) | 89, 90, 371, 502 |
| PspOMI | GGGCCC | 1 cut(s) | 87 |
| PspPI | GGNCC | 4 cut(s) | 87, 88, 188, 369 |
| RseI | CAYNNNNRTG | 2 cut(s) | 509, 618 |
| SaqAI | TTAA | 6 cut(s) | 123, 213, 324, 666, 674, 689 |
| SatI | GCNGC | 2 cut(s) | 600, 603 |
| Sau3AI | GATC | 1 cut(s) | 69 |
| Sau96I | GGNCC | 4 cut(s) | 87, 88, 188, 369 |
| SchI | GAGTC | 1 cut(s) | 457 |
| SduI | GDGCHC | 1 cut(s) | 91 |
| SetI | ASST | 3 cut(s) | 149, 182, 243 |
| SfaNI | GCATC | 1 cut(s) | 592 |
| SfuI | TTCGAA | 2 cut(s) | 33, 520 |
| SinI | GGWCC | 1 cut(s) | 369 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 509, 618 |
| SsiI | CCGC | 1 cut(s) | 603 |
| SspI | AATATT | 2 cut(s) | 517, 671 |
| TaaI | ACNGT | 1 cut(s) | 455 |
| TaiI | ACGT | 1 cut(s) | 149 |
| TaqI | TCGA | 3 cut(s) | 33, 416, 520 |
| TauI | GCSGC | 1 cut(s) | 605 |
| TfiI | GAWTC | 3 cut(s) | 77, 137, 152 |
| Tru1I | TTAA | 6 cut(s) | 123, 213, 324, 666, 674, 689 |
| Tru9I | TTAA | 6 cut(s) | 123, 213, 324, 666, 674, 689 |
| TscAI | CASTG | 1 cut(s) | 516 |
| TseI | GCWGC | 1 cut(s) | 599 |
| TspDTI | ATGAA | 4 cut(s) | 368, 399, 510, 630 |
| TspRI | CASTG | 1 cut(s) | 516 |
| VpaK11BI | GGWCC | 1 cut(s) | 369 |
| XapI | RAATTY | 5 cut(s) | 117, 130, 157, 215, 259 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 70 |
| XmiI | GTMKAC | 1 cut(s) | 610 |