pycom13g28400

regulation of auxin polar transport

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
24249409 .. 24252416
3008 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g28400.4

Sequence Viewer

Length: 2286 bp
ATGGAGAGCAGCTCGAAACCCTTTCAGTTTCACAGTTGTTGGGAAATTTGTAAAGGGTGGGTGTTATTTGAAGATCCACCACAGAGAGCTCTTATGCCGGTGTTTGGAACTGCATCCTCAGCGGCAGATATGGATGAAGATGGATCTTCAACCATTCAACAAACAAGGGTAGAAAATCCGTCTTCGGGTGAAGGTTCTATACCTAGGGCTATGGGACTAAACAAGGCGCGAAGGTTGAAGGAAAAGGGTAAGGTAAATCATGATTATGCCGCTAACATGAAGTGGCGGCCTCATTGCGATTATTGGCATGAAGAACAGGCCAAACAAATACAAGAAGAGATGGATGATAAGAATATGGAAATGAACACTTCGAATTACACTTCAATGAGTAAGACCTATTTTGATAGGAAAGAAAAAGAAATTATGAGCCGACGATTAAATTTAAGTTGTTTTGTAGTTTTTAAATTTAATTTGTCGTTTTTAAATTTTATTGTTGTTTTTAAATTTAAGTTGTTGTGGTTTTTAAATTTAAATAATAAATTATGTTTGGCCCTATGGCCTTCGGTTGGAGACGGTTTTTTTGTGACAGGGCTAAAACGAGCCCTTTGGCCCTCGGTTGGAGACGGAGGCAAATATGACCATGTATTGTTCATTAAAATATTAATATCTTGGAGGGTCAGAGGGCTAAAACGAGCCATCTGGCTAGCCCTCGATTATTGTATTTTGCATATTATAATATATTATTGTGTAGTGGTACGTATATTCTTTTTACTTTTTGGAGTTTTTAGACTAATTGCTTATTGGATGGACTATCTTTCTAACTGTTTAGAGTTTATTAAAATAAATTTGAACTTGAGTAATAAATTTGAATGCTTATTTTATAATATTTATTTATTTATATATTTTTTTAATTGCCGTATCCCATGGTGTATTCGTTTTAAAAATTTAACATGTCCACGTGTCCTATTGTGTCGTATCCCGTATCCGTGTCCATGTCCATGTATCATAGGTGTGTTAGATACGCATGGACGACAAAGAATGGTGGAATCCAATGAAATCGTTCACAGCAGTAGCAGCAATATTTTGCACTGCAATTCTCTAAAACATCGTCTGCATTTTATCGATCTTTTCCATACCAAAATATCATTTTCTTCACTGAAATTTAACAACTTTAAGCTGCTGAATTCGTATAGGGAATATCCTCCACACACACACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAGCAAATTGCCTCCTTGTTCCGTGACAACCGTTTTAACCACGAAAAACCACACAGGACATCTAAGAAATGAATATTATCTGTCACTGACTTTGCTATTGTCTTGCATTCTGAAACCTCTTCCCTTCTGCAATCCTCCAAAAGTAATGAAAAGTGTGTCTCATTTGTTTGTACGAATTTTAATTATTCTATGTTTATTAGATCATAATCTTGATGACTTCTACAATGCAGTTCTCAGTATCAAACGATATCAATCAAATTATCAATGCAAGTCCAATCGAAGGTGTTATAATTTAGAGTCCAATCCAATACAATGGGGAAATTTCAAGCATATAAAAAATTGGGGAAAAACTAATCACTTGGTTTTAAAAGACAATGGCAGCACATTGTTTTGGAGTGTGATGCGTTACAAGTGGTTTAAGCTATTGGCAGACGTTAAAACTAGCCTACGGAGCTTCTCATCATGTACATCCGCCAATTTAGTGGCGCATACAATGACCAAGTTACTGTTACTAGTTATTGGTTTGACGAGAGTCCGAACATTATTCAGGATGCCCTCATTCAAGATTGTATGCTTGCTTAATATTATGAATAAAATTTCCACAAAGAATGAAATGCATACAATTTTGGTGAAAATAAAGTTCCCCAACTTCAATTCTATGCCCTCCTATTCCCCCCCTCCCAAGATTTGTCCCACAGATATTACCTCTCTCGTTCCTAAACACATCAACAACAACCACATATGCCCAAGCCATAGGATTCACCGGAGCCCCACCCTGCTGCGGTTGCACACACTCCCGGCCTCAATTTGCCAATGCCCACAATCACCACTCATTTCTTTTGTGTACTTTGTCAAAAGTATTTACACATCCACAAATAATAATGCATTTTTGTTAACTCAATGCGCTAAACCCACCTCCCTTCATCATTTGCTTGAACTCCTTGTAGTTGACCCTTCCATCTCCATCCACATCCACCTTCATGATCATCCTTTTGCAGTCCTCTATAGTCCTCCCTTGCTTAAGCCCGAGGGACGATAA
Functional Annotation

Protein Analysis

762

Amino Acids

88.56

Weight (kDa)

9.6

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000705)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g23932 FvH4_3g35672 FvH4_4g18641 FvH4_7g17721
malus_domestica MD03G1177400.v1.1 MD07G1181800.v1.1 MD08G1042000.v1.1 MD08G1109500.v1.1 MD10G1235600.v1.1 MD14G1015600.v1.1 MD17G1218600.v1.1
prunus_persica Prupe.3G094000_v2.0.a1 Prupe.4G233800_v2.0.a1
pyrus_communis pycom05g03000 pycom06g19840 pycom08g03390 pycom08g03420 pycom09g12380 pycom11g05900 pycom13g28390 pycom13g28400 pycom14g03000 pycom16g13550 pycom16g13560 pycom16g25710 pycom17g22320
rosa_chinensis RchiOBHm_Chr2g0111501 RchiOBHm_Chr3g0494851 RchiOBHm_Chr4g0406761 RchiOBHm_Chr6g0260681 RchiOBHm_Chr6g0298551
rosa_laevigata RLG00000002080 RLG00000002250 RLG00000002368 RLG00000012994 RLG00000017948 RLG00000022683
rosa_multiflora Rmu_sc0000441.1_g000135 Rmu_sc0000610.1_g000022 Rmu_sc0000861.1_g000009 Rmu_sc0000938.1_g000012 Rmu_sc0001551.1_g000021 Rmu_sc0001685.1_g000059 Rmu_sc0002132.1_g000058 Rmu_sc0002539.1_g000108 Rmu_sc0002856.1_g000004 Rmu_sc0002868.1_g000022 Rmu_sc0003642.1_g000004 Rmu_sc0005394.1_g000003 Rmu_sc0005742.1_g000002 Rmu_sc0006138.1_g000008 Rmu_sc0006320.1_g000009 Rmu_sc0006616.1_g000006 Rmu_sc0007485.1_g000021 Rmu_sc0008518.1_g000027 Rmu_sc0010999.1_g000017 Rmu_sc0011648.1_g000001 Rmu_sc0013558.1_g000009 Rmu_sc0013665.1_g000001 Rmu_sc0014762.1_g000006 Rmu_ssc0000050.1_g000057
rosa_roxburghii Rroxscaffold_1G00024040
rosa_samantha Rh1CG033000 Rh1CG207600 Rh6CG418600
rosa_wichuraiana Rw1G008980 Rw1G034040 Rw4G013350 Rw4G032310 Rw5G001190 Rw5G026320 Rw5G038830 Rw6G008970 Rw7G034950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 734, 882, 1536
AccII CGCG 1 cut(s) 229
AciI CCGC 5 cut(s) 122, 270, 286, 1719, 2029
AclWI GGATC 2 cut(s) 68, 151
AcvI CACGTG 1 cut(s) 959
AfaI GTAC 4 cut(s) 756, 1419, 1714, 2093
AfiI CCNNNNNNNGG 6 cut(s) 104, 185, 566, 617, 1527, 2028
AflII CTTAAG 1 cut(s) 2267
AflIII ACRYGT 2 cut(s) 950, 958
AhlI ACTAGT 1 cut(s) 1759
AluBI AGCT 5 cut(s) 12, 89, 1177, 1669, 1701
AluI AGCT 5 cut(s) 12, 89, 1177, 1669, 1701
Alw21I GWGCWC 1 cut(s) 91
Alw26I GTCTC 3 cut(s) 564, 615, 1410
AlwI GGATC 2 cut(s) 68, 151
Ama87I CYCGRG 1 cut(s) 2273
AoxI GGCC 6 cut(s) 287, 318, 549, 557, 608, 2046
ApeKI GCWGC 5 cut(s) 9, 1074, 1177, 1626, 2026
ArsI GACNNNNNNTTYG 2 cut(s) 563, 595
AseI ATTAAT 1 cut(s) 662
Asp700I GAANNNNTTC 1 cut(s) 1059
AspA2I CCTAGG 1 cut(s) 203
AspLEI GCGC 3 cut(s) 229, 1735, 2153
AspS9I GGNCC 2 cut(s) 550, 609
AsuC2I CCSGG 1 cut(s) 2045
AsuHPI GGTGA 4 cut(s) 200, 1888, 2000, 2064
AsuII TTCGAA 1 cut(s) 371
AsuNHI GCTAGC 1 cut(s) 703
AvaI CYCGRG 1 cut(s) 2273
AvrII CCTAGG 1 cut(s) 203
BanII GRGCYC 3 cut(s) 91, 604, 2018
BarI GAAGNNNNNNTAC 2 cut(s) 183, 215
BbrPI CACGTG 1 cut(s) 959
BbsI GAAGAC 1 cut(s) 174
Bbv12I GWGCWC 1 cut(s) 91
BbvCI CCTCAGC 1 cut(s) 118
BbvI GCAGC 5 cut(s) 21, 1086, 1164, 1638, 2013
BccI CCATC 6 cut(s) 134, 334, 704, 799, 2213, 2219
BceAI ACGGC 1 cut(s) 900
BciVI GTATCC 3 cut(s) 929, 986, 993
BclI TGATCA 1 cut(s) 2230
BcnI CCSGG 1 cut(s) 2045
BcoDI GTCTC 3 cut(s) 564, 615, 1410
BcuI ACTAGT 1 cut(s) 1759
BfaI CTAG 5 cut(s) 204, 704, 1248, 1689, 1760
BfmI CTRYAG 1 cut(s) 2251
BfrI CTTAAG 1 cut(s) 2267
BfuI GTATCC 3 cut(s) 929, 986, 993
BisI GCNGC 8 cut(s) 10, 123, 270, 287, 1075, 1178, 1627, 2027
BlnI CCTAGG 1 cut(s) 203
BlsI GCNGC 8 cut(s) 11, 124, 271, 288, 1076, 1179, 1628, 2028
Bme1390I CCNGG 1 cut(s) 2045
BmeT110I CYCGRG 1 cut(s) 2273
BmgT120I GGNCC 2 cut(s) 550, 609
BmiI GGNNCC 1 cut(s) 2015
BmrFI CCNGG 1 cut(s) 2045
BmsI GCATC 3 cut(s) 122, 1638, 1788
BmtI GCTAGC 1 cut(s) 707
BoxI GACNNNNGTC 1 cut(s) 1778
BpiI GAAGAC 1 cut(s) 174
BplI GAGNNNNNCTC 1 cut(s) 28
Bpu10I CCTNAGC 1 cut(s) 118
Bpu14I TTCGAA 1 cut(s) 371
BpuEI CTTGAG 1 cut(s) 874
BpuMI CCSGG 1 cut(s) 2045
Bsa29I ATCGAT 1 cut(s) 1122
BsaAI YACGTR 2 cut(s) 758, 959
BsaBI GATNNNNATC 2 cut(s) 1452, 1498
BsaJI CCNNGG 4 cut(s) 203, 612, 923, 2274
BsaWI WCCGGW 1 cut(s) 2010
Bsc4I CCNNNNNNNGG 6 cut(s) 104, 185, 566, 617, 1527, 2028
Bse118I RCCGGY 1 cut(s) 97
Bse3DI GCAATG 1 cut(s) 292
Bse8I GATNNNNATC 2 cut(s) 1452, 1498
BseCI ATCGAT 1 cut(s) 1122
BseDI CCNNGG 4 cut(s) 203, 612, 923, 2274
BseJI GATNNNNATC 2 cut(s) 1452, 1498
BseLI CCNNNNNNNGG 6 cut(s) 104, 185, 566, 617, 1527, 2028
BseMI GCAATG 1 cut(s) 292
BseMII CTCAG 2 cut(s) 132, 1495
BseXI GCAGC 5 cut(s) 21, 1086, 1164, 1638, 2013
Bsh1236I CGCG 1 cut(s) 229
BshFI GGCC 6 cut(s) 289, 320, 551, 559, 610, 2048
BshVI ATCGAT 1 cut(s) 1122
BsiHKAI GWGCWC 1 cut(s) 91
BsiHKCI CYCGRG 1 cut(s) 2273
BsiSI CCGG 3 cut(s) 98, 2011, 2045
BslFI GGGAC 2 cut(s) 228, 1923
BslI CCNNNNNNNGG 6 cut(s) 104, 185, 566, 617, 1527, 2028
BsmAI GTCTC 3 cut(s) 564, 615, 1410
BsmBI CGTCTC 2 cut(s) 564, 615
BsmFI GGGAC 2 cut(s) 228, 1923
BsmI GAATGC 2 cut(s) 875, 1353
BsnI GGCC 6 cut(s) 289, 320, 551, 559, 610, 2048
BsoBI CYCGRG 1 cut(s) 2273
Bsp119I TTCGAA 1 cut(s) 371
Bsp1286I GDGCHC 3 cut(s) 91, 604, 2018
Bsp1407I TGTACA 1 cut(s) 1712
Bsp143I GATC 5 cut(s) 73, 143, 1123, 1447, 2230
Bsp19I CCATGG 1 cut(s) 923
BspACI CCGC 5 cut(s) 122, 270, 286, 1719, 2029
BspANI GGCC 6 cut(s) 289, 320, 551, 559, 610, 2048
BspCNI CTCAG 2 cut(s) 131, 1494
BspDI ATCGAT 1 cut(s) 1122
BspFNI CGCG 1 cut(s) 229
BspHI TCATGA 2 cut(s) 259, 2227
BspLI GGNNCC 1 cut(s) 2015
BspOI GCTAGC 1 cut(s) 707
BspPI GGATC 2 cut(s) 68, 151
BspT104I TTCGAA 1 cut(s) 371
BspTI CTTAAG 1 cut(s) 2267
BsrDI GCAATG 1 cut(s) 292
BsrFI RCCGGY 1 cut(s) 97
BsrGI TGTACA 1 cut(s) 1712
BssAI RCCGGY 1 cut(s) 97
BssECI CCNNGG 4 cut(s) 203, 612, 923, 2274
BssMI GATC 5 cut(s) 73, 143, 1123, 1447, 2230
BssT1I CCWWGG 2 cut(s) 203, 923
Bst4CI ACNGT 5 cut(s) 35, 575, 824, 1279, 1755
Bst6I CTCTTC 2 cut(s) 330, 1371
BstAFI CTTAAG 1 cut(s) 2267
BstAUI TGTACA 1 cut(s) 1712
BstBAI YACGTR 2 cut(s) 758, 959
BstBI TTCGAA 1 cut(s) 371
BstC8I GCNNGC 2 cut(s) 705, 1823
BstDEI CTNAG 3 cut(s) 118, 1310, 1481
BstDSI CCRYGG 1 cut(s) 923
BstFNI CGCG 1 cut(s) 229
BstHHI GCGC 3 cut(s) 229, 1735, 2153
BstKTI GATC 5 cut(s) 76, 146, 1126, 1450, 2233
BstMAI GTCTC 3 cut(s) 564, 615, 1410
BstMBI GATC 5 cut(s) 73, 143, 1123, 1447, 2230
BstMWI GCNNNNNNNGC 4 cut(s) 119, 1074, 1698, 2032
BstNSI RCATGY 1 cut(s) 954
BstPAI GACNNNNGTC 1 cut(s) 1778
BstSCI CCNGG 1 cut(s) 2043
BstSFI CTRYAG 1 cut(s) 2251
BstSNI TACGTA 1 cut(s) 758
BstUI CGCG 1 cut(s) 229
BstV1I GCAGC 5 cut(s) 21, 1086, 1164, 1638, 2013
BstV2I GAAGAC 1 cut(s) 174
BstX2I RGATCY 2 cut(s) 73, 143
BstXI CCANNNNNNTGG 2 cut(s) 1560, 1729
BstYI RGATCY 2 cut(s) 73, 143
Bsu15I ATCGAT 1 cut(s) 1122
BsuI GTATCC 3 cut(s) 929, 986, 993
BsuRI GGCC 6 cut(s) 289, 320, 551, 559, 610, 2048
BsuTUI ATCGAT 1 cut(s) 1122
BtgI CCRYGG 1 cut(s) 923
BtsI GCAGTG 1 cut(s) 1087
BtsIMutI CAGTG 3 cut(s) 1087, 1154, 1331
Cac8I GCNNGC 2 cut(s) 705, 1823
CciI TCATGA 2 cut(s) 259, 2227
CfoI GCGC 3 cut(s) 229, 1735, 2153
Cfr10I RCCGGY 1 cut(s) 97
Cfr13I GGNCC 2 cut(s) 550, 609
ClaI ATCGAT 1 cut(s) 1122
Csp6I GTAC 4 cut(s) 755, 1418, 1713, 2092
CviQI GTAC 4 cut(s) 755, 1418, 1713, 2092
DdeI CTNAG 3 cut(s) 118, 1310, 1481
DpnI GATC 5 cut(s) 75, 145, 1125, 1449, 2232
DpnII GATC 5 cut(s) 73, 143, 1123, 1447, 2230
DraI TTTAAA 7 cut(s) 463, 483, 502, 525, 531, 940, 1614
Eam1104I CTCTTC 2 cut(s) 330, 1371
EarI CTCTTC 2 cut(s) 330, 1371
EciI GGCGGA 1 cut(s) 1708
Ecl136II GAGCTC 1 cut(s) 89
Eco105I TACGTA 1 cut(s) 758
Eco130I CCWWGG 2 cut(s) 203, 923
Eco24I GRGCYC 3 cut(s) 91, 604, 2018
Eco32I GATATC 1 cut(s) 1496
Eco53kI GAGCTC 1 cut(s) 89
Eco72I CACGTG 1 cut(s) 959
Eco88I CYCGRG 1 cut(s) 2273
EcoICRI GAGCTC 1 cut(s) 89
EcoRI GAATTC 1 cut(s) 1183
EcoRV GATATC 1 cut(s) 1496
EcoT14I CCWWGG 2 cut(s) 203, 923
EcoT22I ATGCAT 2 cut(s) 1866, 2134
EcoT38I GRGCYC 3 cut(s) 91, 604, 2018
ErhI CCWWGG 2 cut(s) 203, 923
Esp3I CGTCTC 2 cut(s) 564, 615
FaqI GGGAC 2 cut(s) 228, 1923
FauNDI CATATG 1 cut(s) 1988
FbaI TGATCA 1 cut(s) 2230
Fnu4HI GCNGC 8 cut(s) 10, 123, 270, 287, 1075, 1178, 1627, 2027
FriOI GRGCYC 3 cut(s) 91, 604, 2018
Fsp4HI GCNGC 8 cut(s) 10, 123, 270, 287, 1075, 1178, 1627, 2027
FspBI CTAG 5 cut(s) 204, 704, 1248, 1689, 1760
GlaI GCGC 3 cut(s) 228, 1734, 2152
GluI GCNGC 8 cut(s) 10, 123, 270, 287, 1075, 1178, 1627, 2027
HaeIII GGCC 6 cut(s) 289, 320, 551, 559, 610, 2048
HapII CCGG 3 cut(s) 98, 2011, 2045
HhaI GCGC 3 cut(s) 229, 1735, 2153
Hin6I GCGC 3 cut(s) 227, 1733, 2151
HinP1I GCGC 3 cut(s) 227, 1733, 2151
HincII GTYRAC 2 cut(s) 2142, 2197
HindII GTYRAC 2 cut(s) 2142, 2197
HinfI GANTC 4 cut(s) 1046, 1544, 1779, 2005
HpaI GTTAAC 1 cut(s) 2142
HpaII CCGG 3 cut(s) 98, 2011, 2045
HphI GGTGA 4 cut(s) 200, 1888, 2000, 2064
Hpy166II GTNNAC 5 cut(s) 956, 1063, 2092, 2142, 2197
Hpy188I TCNGA 3 cut(s) 680, 1359, 1784
Hpy188III TCNNGA 5 cut(s) 260, 1457, 1795, 1810, 2228
Hpy8I GTNNAC 5 cut(s) 956, 1063, 2092, 2142, 2197
Hpy99I CGWCG 1 cut(s) 435
HpyAV CCTTC 9 cut(s) 185, 225, 232, 570, 1381, 1521, 2177, 2211, 2234
HpyCH4III ACNGT 5 cut(s) 35, 575, 824, 1279, 1755
HpyCH4IV ACGT 3 cut(s) 757, 958, 1680
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 1074, 1698, 2032
HpyF3I CTNAG 3 cut(s) 118, 1310, 1481
HpySE526I ACGT 3 cut(s) 757, 958, 1680
HspAI GCGC 3 cut(s) 227, 1733, 2151
Ksp22I TGATCA 1 cut(s) 2230
KspAI GTTAAC 1 cut(s) 2142
Kzo9I GATC 5 cut(s) 73, 143, 1123, 1447, 2230
LmnI GCTCC 2 cut(s) 1698, 2013
LpnPI CCDG 9 cut(s) 111, 302, 573, 685, 1287, 1780, 2024, 2036, 2058
Lsp1109I GCAGC 5 cut(s) 21, 1086, 1164, 1638, 2013
LweI GCATC 3 cut(s) 122, 1638, 1788
MaeI CTAG 5 cut(s) 204, 704, 1248, 1689, 1760
MaeII ACGT 3 cut(s) 757, 958, 1680
MaeIII GTNAC 6 cut(s) 583, 1270, 1329, 1652, 1749, 1755
MalI GATC 5 cut(s) 75, 145, 1125, 1449, 2232
MboI GATC 5 cut(s) 73, 143, 1123, 1447, 2230
MboII GAAGA 8 cut(s) 83, 138, 149, 174, 323, 347, 1143, 1358
MflI RGATCY 2 cut(s) 73, 143
MhlI GDGCHC 3 cut(s) 91, 604, 2018
MlyI GAGTC 2 cut(s) 1553, 1788
MmeI TCCRAC 2 cut(s) 547, 598
Mph1103I ATGCAT 2 cut(s) 1866, 2134
MroXI GAANNNNTTC 1 cut(s) 1059
MslI CAYNNNNRTG 5 cut(s) 264, 383, 997, 1010, 2226
MspA1I CMGCKG 1 cut(s) 122
MspCI CTTAAG 1 cut(s) 2267
MspI CCGG 3 cut(s) 98, 2011, 2045
MspR9I CCNGG 1 cut(s) 2045
Mva1269I GAATGC 2 cut(s) 875, 1353
MvnI CGCG 1 cut(s) 229
MwoI GCNNNNNNNGC 4 cut(s) 119, 1074, 1698, 2032
NciI CCSGG 1 cut(s) 2045
NcoI CCATGG 1 cut(s) 923
NdeI CATATG 1 cut(s) 1988
NdeII GATC 5 cut(s) 73, 143, 1123, 1447, 2230
NheI GCTAGC 1 cut(s) 703
NlaIV GGNNCC 1 cut(s) 2015
NmuCI GTSAC 3 cut(s) 583, 1270, 1329
NsiI ATGCAT 2 cut(s) 1866, 2134
NspI RCATGY 1 cut(s) 954
NspV TTCGAA 1 cut(s) 371
PagI TCATGA 2 cut(s) 259, 2227
PciI ACATGT 1 cut(s) 950
PctI GAATGC 2 cut(s) 875, 1353
PdmI GAANNNNTTC 1 cut(s) 1059
PfeI GAWTC 2 cut(s) 1046, 2005
PkrI GCNGC 8 cut(s) 11, 124, 271, 288, 1076, 1179, 1628, 2028
PleI GAGTC 2 cut(s) 1552, 1787
PmaCI CACGTG 1 cut(s) 959
PmlI CACGTG 1 cut(s) 959
PpsI GAGTC 2 cut(s) 1552, 1787
Ppu21I YACGTR 2 cut(s) 758, 959
PscI ACATGT 1 cut(s) 950
PshAI GACNNNNGTC 1 cut(s) 1778
PshBI ATTAAT 1 cut(s) 662
PsiI TTATAA 3 cut(s) 734, 882, 1536
Psp124BI GAGCTC 1 cut(s) 91
PspCI CACGTG 1 cut(s) 959
PspN4I GGNNCC 1 cut(s) 2015
PspPI GGNCC 2 cut(s) 550, 609
PsuI RGATCY 2 cut(s) 73, 143
RsaI GTAC 4 cut(s) 756, 1419, 1714, 2093
RsaNI GTAC 4 cut(s) 755, 1418, 1713, 2092
RseI CAYNNNNRTG 5 cut(s) 264, 383, 997, 1010, 2226
SacI GAGCTC 1 cut(s) 91
SatI GCNGC 8 cut(s) 10, 123, 270, 287, 1075, 1178, 1627, 2027
Sau3AI GATC 5 cut(s) 73, 143, 1123, 1447, 2230
Sau96I GGNCC 2 cut(s) 550, 609
SchI GAGTC 2 cut(s) 1553, 1788
ScrFI CCNGG 1 cut(s) 2045
SduI GDGCHC 3 cut(s) 91, 604, 2018
SfaNI GCATC 3 cut(s) 122, 1638, 1788
SfcI CTRYAG 1 cut(s) 2251
SfuI TTCGAA 1 cut(s) 371
SmiI ATTTAAAT 1 cut(s) 531
SmiMI CAYNNNNRTG 5 cut(s) 264, 383, 997, 1010, 2226
SmlI CTYRAG 2 cut(s) 853, 2267
SmoI CTYRAG 2 cut(s) 853, 2267
SnaBI TACGTA 1 cut(s) 758
SpeI ACTAGT 1 cut(s) 1759
SsiI CCGC 5 cut(s) 122, 270, 286, 1719, 2029
SspI AATATT 5 cut(s) 660, 886, 1081, 1322, 1831
SspMI CTAG 5 cut(s) 204, 704, 1248, 1689, 1760
SstI GAGCTC 1 cut(s) 91
StyD4I CCNGG 1 cut(s) 2043
StyI CCWWGG 2 cut(s) 203, 923
SwaI ATTTAAAT 1 cut(s) 531
TaaI ACNGT 5 cut(s) 35, 575, 824, 1279, 1755
TaiI ACGT 3 cut(s) 760, 961, 1683
TaqI TCGA 5 cut(s) 14, 371, 711, 1122, 1525
TatI WGTACW 2 cut(s) 1712, 2091
TauI GCSGC 3 cut(s) 125, 272, 289
TfiI GAWTC 2 cut(s) 1046, 2005
TscAI CASTG 3 cut(s) 1094, 1161, 1338
TseFI GTSAC 3 cut(s) 583, 1270, 1329
TseI GCWGC 5 cut(s) 9, 1074, 1177, 1626, 2026
Tsp45I GTSAC 3 cut(s) 583, 1270, 1329
TspGWI ACGGA 5 cut(s) 168, 639, 975, 1258, 1711
TspRI CASTG 3 cut(s) 1094, 1161, 1338
Vha464I CTTAAG 1 cut(s) 2267
VspI ATTAAT 1 cut(s) 662
XceI RCATGY 1 cut(s) 954
XmaJI CCTAGG 1 cut(s) 203
XmnI GAANNNNTTC 1 cut(s) 1059
XspI CTAG 5 cut(s) 204, 704, 1248, 1689, 1760
Zsp2I ATGCAT 2 cut(s) 1866, 2134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.