ribosomal small subunit assembly
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 747 |
| AccII | CGCG | 1 cut(s) | 350 |
| AciI | CCGC | 6 cut(s) | 291, 348, 350, 449, 504, 639 |
| AclWI | GGATC | 1 cut(s) | 833 |
| AcoI | YGGCCR | 1 cut(s) | 465 |
| AcsI | RAATTY | 3 cut(s) | 138, 342, 716 |
| AcuI | CTGAAG | 2 cut(s) | 321, 606 |
| AfaI | GTAC | 1 cut(s) | 244 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 483, 510, 645, 848 |
| AgsI | TTSAA | 5 cut(s) | 223, 322, 524, 632, 679 |
| AjnI | CCWGG | 3 cut(s) | 107, 199, 847 |
| AluBI | AGCT | 4 cut(s) | 536, 584, 590, 783 |
| AluI | AGCT | 4 cut(s) | 536, 584, 590, 783 |
| Alw26I | GTCTC | 1 cut(s) | 263 |
| AlwI | GGATC | 1 cut(s) | 833 |
| AoxI | GGCC | 3 cut(s) | 465, 485, 501 |
| ApeKI | GCWGC | 1 cut(s) | 254 |
| ApoI | RAATTY | 3 cut(s) | 138, 342, 716 |
| AspS9I | GGNCC | 3 cut(s) | 44, 105, 851 |
| AvaII | GGWCC | 3 cut(s) | 44, 105, 851 |
| BbsI | GAAGAC | 2 cut(s) | 57, 286 |
| BbvI | GCAGC | 1 cut(s) | 241 |
| BccI | CCATC | 3 cut(s) | 422, 428, 802 |
| BciT130I | CCWGG | 3 cut(s) | 109, 201, 849 |
| BcoDI | GTCTC | 1 cut(s) | 263 |
| BisI | GCNGC | 3 cut(s) | 255, 449, 504 |
| BlsI | GCNGC | 3 cut(s) | 256, 450, 505 |
| Bme1390I | CCNGG | 3 cut(s) | 109, 201, 849 |
| Bme18I | GGWCC | 3 cut(s) | 44, 105, 851 |
| BmgT120I | GGNCC | 3 cut(s) | 44, 105, 851 |
| BmiI | GGNNCC | 3 cut(s) | 106, 355, 769 |
| BmrFI | CCNGG | 3 cut(s) | 109, 201, 849 |
| BmsI | GCATC | 1 cut(s) | 316 |
| BpiI | GAAGAC | 2 cut(s) | 57, 286 |
| BpmI | CTGGAG | 1 cut(s) | 687 |
| BpuEI | CTTGAG | 2 cut(s) | 534, 763 |
| BsaBI | GATNNNNATC | 1 cut(s) | 843 |
| BsaJI | CCNNGG | 2 cut(s) | 348, 373 |
| BsaWI | WCCGGW | 2 cut(s) | 41, 785 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 483, 510, 645, 848 |
| Bse118I | RCCGGY | 1 cut(s) | 451 |
| Bse8I | GATNNNNATC | 1 cut(s) | 843 |
| BseBI | CCWGG | 3 cut(s) | 109, 201, 849 |
| BseDI | CCNNGG | 2 cut(s) | 348, 373 |
| BseJI | GATNNNNATC | 1 cut(s) | 843 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 483, 510, 645, 848 |
| BseMII | CTCAG | 2 cut(s) | 251, 819 |
| BseXI | GCAGC | 1 cut(s) | 241 |
| Bsh1236I | CGCG | 1 cut(s) | 350 |
| BshFI | GGCC | 3 cut(s) | 467, 487, 503 |
| BsiSI | CCGG | 4 cut(s) | 42, 452, 464, 786 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 483, 510, 645, 848 |
| BsmAI | GTCTC | 1 cut(s) | 263 |
| BsmI | GAATGC | 1 cut(s) | 35 |
| BsnI | GGCC | 3 cut(s) | 467, 487, 503 |
| Bsp143I | GATC | 1 cut(s) | 838 |
| Bsp19I | CCATGG | 1 cut(s) | 373 |
| BspACI | CCGC | 6 cut(s) | 291, 348, 350, 449, 504, 639 |
| BspANI | GGCC | 3 cut(s) | 467, 487, 503 |
| BspCNI | CTCAG | 2 cut(s) | 250, 818 |
| BspFNI | CGCG | 1 cut(s) | 350 |
| BspLI | GGNNCC | 3 cut(s) | 106, 355, 769 |
| BspPI | GGATC | 1 cut(s) | 833 |
| BspQI | GCTCTTC | 1 cut(s) | 438 |
| BsrFI | RCCGGY | 1 cut(s) | 451 |
| BssAI | RCCGGY | 1 cut(s) | 451 |
| BssECI | CCNNGG | 2 cut(s) | 348, 373 |
| BssMI | GATC | 1 cut(s) | 838 |
| BssT1I | CCWWGG | 1 cut(s) | 373 |
| Bst2UI | CCWGG | 3 cut(s) | 109, 201, 849 |
| Bst6I | CTCTTC | 2 cut(s) | 438, 519 |
| BstC8I | GCNNGC | 3 cut(s) | 33, 183, 534 |
| BstDEI | CTNAG | 2 cut(s) | 237, 805 |
| BstDSI | CCRYGG | 2 cut(s) | 348, 373 |
| BstEII | GGTNACC | 1 cut(s) | 788 |
| BstFNI | CGCG | 1 cut(s) | 350 |
| BstKTI | GATC | 1 cut(s) | 841 |
| BstMAI | GTCTC | 1 cut(s) | 263 |
| BstMBI | GATC | 1 cut(s) | 838 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 706 |
| BstNI | CCWGG | 3 cut(s) | 109, 201, 849 |
| BstPI | GGTNACC | 1 cut(s) | 788 |
| BstSCI | CCNGG | 3 cut(s) | 107, 199, 847 |
| BstUI | CGCG | 1 cut(s) | 350 |
| BstV1I | GCAGC | 1 cut(s) | 241 |
| BstV2I | GAAGAC | 2 cut(s) | 57, 286 |
| BsuRI | GGCC | 3 cut(s) | 467, 487, 503 |
| BtgI | CCRYGG | 2 cut(s) | 348, 373 |
| BtsIMutI | CAGTG | 1 cut(s) | 245 |
| Cac8I | GCNNGC | 3 cut(s) | 33, 183, 534 |
| Cfr10I | RCCGGY | 1 cut(s) | 451 |
| Cfr13I | GGNCC | 3 cut(s) | 44, 105, 851 |
| Cfr42I | CCGCGG | 1 cut(s) | 351 |
| CseI | GACGC | 1 cut(s) | 65 |
| Csp6I | GTAC | 1 cut(s) | 243 |
| CviAII | CATG | 5 cut(s) | 143, 336, 374, 577, 833 |
| CviQI | GTAC | 1 cut(s) | 243 |
| DdeI | CTNAG | 2 cut(s) | 237, 805 |
| DpnI | GATC | 1 cut(s) | 840 |
| DpnII | GATC | 1 cut(s) | 838 |
| EaeI | YGGCCR | 1 cut(s) | 465 |
| Eam1104I | CTCTTC | 2 cut(s) | 438, 519 |
| EarI | CTCTTC | 2 cut(s) | 438, 519 |
| Eco130I | CCWWGG | 1 cut(s) | 373 |
| Eco47I | GGWCC | 3 cut(s) | 44, 105, 851 |
| Eco57I | CTGAAG | 2 cut(s) | 321, 606 |
| Eco91I | GGTNACC | 1 cut(s) | 788 |
| EcoO65I | GGTNACC | 1 cut(s) | 788 |
| EcoRI | GAATTC | 2 cut(s) | 138, 716 |
| EcoRII | CCWGG | 3 cut(s) | 107, 199, 847 |
| EcoT14I | CCWWGG | 1 cut(s) | 373 |
| ErhI | CCWWGG | 1 cut(s) | 373 |
| FaeI | CATG | 5 cut(s) | 146, 339, 377, 580, 836 |
| FatI | CATG | 5 cut(s) | 142, 335, 373, 576, 832 |
| FauI | CCCGC | 2 cut(s) | 343, 355 |
| Fnu4HI | GCNGC | 3 cut(s) | 255, 449, 504 |
| Fsp4HI | GCNGC | 3 cut(s) | 255, 449, 504 |
| GluI | GCNGC | 3 cut(s) | 255, 449, 504 |
| GsuI | CTGGAG | 1 cut(s) | 687 |
| HaeIII | GGCC | 3 cut(s) | 467, 487, 503 |
| HapII | CCGG | 4 cut(s) | 42, 452, 464, 786 |
| HgaI | GACGC | 1 cut(s) | 65 |
| Hin1II | CATG | 5 cut(s) | 146, 339, 377, 580, 836 |
| HindIII | AAGCTT | 1 cut(s) | 534 |
| HinfI | GANTC | 6 cut(s) | 8, 219, 635, 759, 773, 844 |
| HpaII | CCGG | 4 cut(s) | 42, 452, 464, 786 |
| Hpy166II | GTNNAC | 2 cut(s) | 243, 396 |
| Hpy188I | TCNGA | 6 cut(s) | 13, 541, 772, 808, 826, 843 |
| Hpy188III | TCNNGA | 7 cut(s) | 47, 89, 216, 493, 551, 632, 704 |
| Hpy8I | GTNNAC | 2 cut(s) | 243, 396 |
| Hpy99I | CGWCG | 2 cut(s) | 59, 391 |
| HpyAV | CCTTC | 2 cut(s) | 218, 598 |
| HpyCH4IV | ACGT | 1 cut(s) | 818 |
| HpyCH4V | TGCA | 4 cut(s) | 35, 66, 146, 257 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 706 |
| HpyF3I | CTNAG | 2 cut(s) | 237, 805 |
| HpySE526I | ACGT | 1 cut(s) | 818 |
| Hsp92II | CATG | 5 cut(s) | 146, 339, 377, 580, 836 |
| KspI | CCGCGG | 1 cut(s) | 351 |
| Kzo9I | GATC | 1 cut(s) | 838 |
| LguI | GCTCTTC | 1 cut(s) | 438 |
| LmnI | GCTCC | 2 cut(s) | 773, 788 |
| Lsp1109I | GCAGC | 1 cut(s) | 241 |
| LweI | GCATC | 1 cut(s) | 316 |
| MaeII | ACGT | 1 cut(s) | 818 |
| MaeIII | GTNAC | 3 cut(s) | 262, 788, 799 |
| MalI | GATC | 1 cut(s) | 840 |
| MboI | GATC | 1 cut(s) | 838 |
| MluCI | AATT | 6 cut(s) | 138, 158, 342, 379, 716, 735 |
| MlyI | GAGTC | 1 cut(s) | 644 |
| MnlI | CCTC | 6 cut(s) | 20, 504, 520, 711, 787, 814 |
| MseI | TTAA | 1 cut(s) | 594 |
| MslI | CAYNNNNRTG | 1 cut(s) | 695 |
| MspA1I | CMGCKG | 1 cut(s) | 350 |
| MspI | CCGG | 4 cut(s) | 42, 452, 464, 786 |
| MspR9I | CCNGG | 3 cut(s) | 109, 201, 849 |
| Mva1269I | GAATGC | 1 cut(s) | 35 |
| MvaI | CCWGG | 3 cut(s) | 109, 201, 849 |
| MvnI | CGCG | 1 cut(s) | 350 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 706 |
| NcoI | CCATGG | 1 cut(s) | 373 |
| NdeII | GATC | 1 cut(s) | 838 |
| NlaIII | CATG | 5 cut(s) | 146, 339, 377, 580, 836 |
| NlaIV | GGNNCC | 3 cut(s) | 106, 355, 769 |
| PciSI | GCTCTTC | 1 cut(s) | 438 |
| PctI | GAATGC | 1 cut(s) | 35 |
| PfeI | GAWTC | 5 cut(s) | 8, 219, 759, 773, 844 |
| PkrI | GCNGC | 3 cut(s) | 256, 450, 505 |
| PleI | GAGTC | 1 cut(s) | 643 |
| PpsI | GAGTC | 1 cut(s) | 643 |
| PsiI | TTATAA | 1 cut(s) | 747 |
| Psp6I | CCWGG | 3 cut(s) | 107, 199, 847 |
| PspEI | GGTNACC | 1 cut(s) | 788 |
| PspGI | CCWGG | 3 cut(s) | 107, 199, 847 |
| PspN4I | GGNNCC | 3 cut(s) | 106, 355, 769 |
| PspPI | GGNCC | 3 cut(s) | 44, 105, 851 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 196, 228 |
| RsaI | GTAC | 1 cut(s) | 244 |
| RsaNI | GTAC | 1 cut(s) | 243 |
| RseI | CAYNNNNRTG | 1 cut(s) | 695 |
| SacII | CCGCGG | 1 cut(s) | 351 |
| SapI | GCTCTTC | 1 cut(s) | 438 |
| SaqAI | TTAA | 1 cut(s) | 594 |
| SatI | GCNGC | 3 cut(s) | 255, 449, 504 |
| Sau3AI | GATC | 1 cut(s) | 838 |
| Sau96I | GGNCC | 3 cut(s) | 44, 105, 851 |
| SchI | GAGTC | 1 cut(s) | 644 |
| ScrFI | CCNGG | 3 cut(s) | 109, 201, 849 |
| SetI | ASST | 7 cut(s) | 205, 538, 586, 592, 785, 806, 821 |
| SfaNI | GCATC | 1 cut(s) | 316 |
| Sfr303I | CCGCGG | 1 cut(s) | 351 |
| SgrBI | CCGCGG | 1 cut(s) | 351 |
| SinI | GGWCC | 3 cut(s) | 44, 105, 851 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 695 |
| SmlI | CTYRAG | 2 cut(s) | 549, 778 |
| SmoI | CTYRAG | 2 cut(s) | 549, 778 |
| Sse9I | AATT | 6 cut(s) | 138, 158, 342, 379, 716, 735 |
| SsiI | CCGC | 6 cut(s) | 291, 348, 350, 449, 504, 639 |
| StyD4I | CCNGG | 3 cut(s) | 107, 199, 847 |
| StyI | CCWWGG | 1 cut(s) | 373 |
| TaiI | ACGT | 1 cut(s) | 821 |
| TaqI | TCGA | 3 cut(s) | 217, 723, 813 |
| TasI | AATT | 6 cut(s) | 138, 158, 342, 379, 716, 735 |
| TatI | WGTACW | 1 cut(s) | 242 |
| TauI | GCSGC | 2 cut(s) | 451, 506 |
| TfiI | GAWTC | 5 cut(s) | 8, 219, 759, 773, 844 |
| Tru1I | TTAA | 1 cut(s) | 594 |
| Tru9I | TTAA | 1 cut(s) | 594 |
| TscAI | CASTG | 1 cut(s) | 245 |
| TseI | GCWGC | 1 cut(s) | 254 |
| TspDTI | ATGAA | 3 cut(s) | 131, 372, 456 |
| TspGWI | ACGGA | 1 cut(s) | 298 |
| TspRI | CASTG | 1 cut(s) | 245 |
| VpaK11BI | GGWCC | 3 cut(s) | 44, 105, 851 |
| XapI | RAATTY | 3 cut(s) | 138, 342, 716 |