pycom14g16010

ATPase 11, plasma

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
18456573 .. 18458367
1795 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g16010.7

Sequence Viewer

Length: 870 bp
ATGGGGGAGAAGCCTGAAGTATTGGATGCTGTGTTGAAGGAAACTGTTGATTTGGAAAATATACCCATTGAAGAGGTGTTTGAGAATCTGAGATGTAGCAAAGAGGGTCTCAGCAGTGAGGCTGCTGAGGAAAGACTCACCATTTTTGGGCACAACAAGCTTGAAGAAAAGCAGGGTAAGCCACCGGATTGGCAAGATTTTGTGGGTATTATGACCCTGCTCGTCATCAATTCCACAATCAGTTTCATTGAGGAAAACAATGCCGGTAATGCTGCAGCAGCACTCATGGCTCGTTTGGCTCCAAAAGCCAAGGTCCTTCGAGATGGAAGGTGGAATGAACAAGATGCTTCGGTTCTAGTTCCTGGTGATATAATTAGTATTAAGCTTGGTGACATTGTTCCAGCCGATGCTCGTCTACTTGAAGGGGATCCTTTGAAAATTGACCAGTCTGCACTTACAGGTGAATCCCTTGCCGTGACGAAAAGCCCTGGGGATGGTGTGTATTCTGGTTCTACTTGTAAACAAGGAGAGATTGAAGCAGTGGTCATTGCCACCGGTGTCCATACCTTCTTTGGAAAAGCTGCTCACCTTGTTGATAGCACGAATCAAGTGGGCCATTTCCAAAAGGTCTTGACTGCAATTGGGAATTTCTGCATATGTTCCATTGCTGTGGGGATGGTAATAGAGATAATTGTCATGTACCCGATTCAAGACCGAAAATATCGTCCTGGAATTGATAACCTTCTTGTGCTTCTCATTGGTGGAATTCCAATTGCCATGCCGACAGTTCTGTCTGTGACAATGGCTATTGGGTCTCATAGATTATCACAGCAGGTTGGGAGCTATTACAAAGAGAATGACAGCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

290

Amino Acids

31.14

Weight (kDa)

4.86

Isoelectric Point (pI)

35.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000545)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g36571
pyrus_communis pycom02g01560 pycom08g10820 pycom09g05820 pycom13g21850 pycom14g16010
rosa_chinensis RchiOBHm_Chr2g0094861 RchiOBHm_Chr2g0124911 RchiOBHm_Chr2g0138581 RchiOBHm_Chr2g0160851 RchiOBHm_Chr4g0407411
rosa_laevigata RLG00000001652 RLG00000001872 RLG00000002037 RLG00000003076 RLG00000006419 RLG00000016771 RLG00000017383 RLG00000022851 RLG00000030563 RLG00000033869 RLG00000034176
rosa_multiflora Rmu_co8013424.1_g000001 Rmu_co8016716.1_g000001 Rmu_co8183472.1_g000001 Rmu_co8254047.1_g000001 Rmu_co8354891.1_g000001 Rmu_sc0000124.1_g000003 Rmu_sc0002132.1_g000027 Rmu_sc0003007.1_g000011 Rmu_sc0003221.1_g000096 Rmu_sc0003221.1_g000097 Rmu_sc0005119.1_g000004 Rmu_sc0008057.1_g000005 Rmu_sc0034532.1_g000001 Rmu_sc0036406.1_g000001 Rmu_ssc0000008.1_g000009
rosa_roxburghii Rroxscaffold_1G00030520 Rroxscaffold_2G00107360 Rroxscaffold_2G00153420 Rroxscaffold_5G00335750 Rroxscaffold_5G00351760 Rroxscaffold_5G00352080 Rroxscaffold_6G00419090
rosa_rugosa Rorug01G0341800 Rorug01G0341900 Rorug02G0180200 Rorug02G0180300 Rorug03G0186100 Rorug03G0186200 Rorug03G0284800 Rorug04G0104500 Rorug05G0246300 Rorug06G0108400 Rorug06G0471500 Rorug06G0510400
rosa_samantha Rh1AG159000 Rh1CG148200 Rh1CG189900 Rh2AG552800 Rh2BG473900 Rh2BG612100 Rh2BG612300 Rh2DG094500 Rh2DG482600 Rh3BG234000 Rh3CG320000 Rh4AG144200 Rh4BG127900 Rh4DG097300 Rh5AG128900 Rh5AG381200 Rh5BG363000 Rh5DG491900 Rh6AG048400 Rh6BG168100 Rh6CG005800 Rh6DG006000 Rh7AG255100 Rh7BG360600 Rh7CG271700 Rh7CG482300 Rh7DG451200
rosa_wichuraiana Rw4G004970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 790
Acc36I ACCTGC 1 cut(s) 823
AccI GTMKAC 1 cut(s) 415
AclWI GGATC 2 cut(s) 422, 435
AcsI RAATTY 2 cut(s) 646, 765
AcuI CTGAAG 1 cut(s) 36
AfaI GTAC 1 cut(s) 701
AfiI CCNNNNNNNGG 2 cut(s) 147, 494
AgeI ACCGGT 1 cut(s) 554
AgsI TTSAA 7 cut(s) 37, 71, 164, 422, 436, 536, 710
AjnI CCWGG 3 cut(s) 361, 487, 727
AluBI AGCT 4 cut(s) 160, 385, 581, 843
AluI AGCT 4 cut(s) 160, 385, 581, 843
Alw26I GTCTC 2 cut(s) 113, 819
AlwI GGATC 2 cut(s) 422, 435
AoxI GGCC 1 cut(s) 613
ApeKI GCWGC 5 cut(s) 122, 272, 275, 278, 581
ApoI RAATTY 2 cut(s) 646, 765
ArsI GACNNNNNNTTYG 2 cut(s) 709, 741
AsiGI ACCGGT 1 cut(s) 554
AspS9I GGNCC 2 cut(s) 313, 613
AsuHPI GGTGA 5 cut(s) 130, 377, 401, 473, 578
AvaII GGWCC 1 cut(s) 313
BaeGI GKGCMC 1 cut(s) 153
BamHI GGATCC 1 cut(s) 427
BbvCI CCTCAGC 1 cut(s) 126
BbvI GCAGC 5 cut(s) 109, 259, 287, 290, 568
BccI CCATC 3 cut(s) 317, 488, 670
BceAI ACGGC 1 cut(s) 458
BciT130I CCWGG 3 cut(s) 363, 489, 729
BcoDI GTCTC 2 cut(s) 113, 819
BfaI CTAG 1 cut(s) 356
BfmI CTRYAG 1 cut(s) 273
BfuAI ACCTGC 1 cut(s) 823
BisI GCNGC 5 cut(s) 123, 273, 276, 279, 582
BlsI GCNGC 5 cut(s) 124, 274, 277, 280, 583
Bme1390I CCNGG 3 cut(s) 363, 489, 729
Bme18I GGWCC 1 cut(s) 313
BmgT120I GGNCC 2 cut(s) 313, 613
BmiI GGNNCC 2 cut(s) 300, 429
BmrFI CCNGG 3 cut(s) 363, 489, 729
BmsI GCATC 3 cut(s) 16, 334, 397
Bpu10I CCTNAGC 1 cut(s) 126
BsaI GGTCTC 2 cut(s) 113, 819
BsaJI CCNNGG 3 cut(s) 309, 487, 488
BsaWI WCCGGW 2 cut(s) 184, 554
Bsc4I CCNNNNNNNGG 2 cut(s) 147, 494
Bse118I RCCGGY 2 cut(s) 263, 554
Bse1I ACTGG 1 cut(s) 445
Bse3DI GCAATG 2 cut(s) 546, 663
BseBI CCWGG 3 cut(s) 363, 489, 729
BseDI CCNNGG 3 cut(s) 309, 487, 488
BseGI GGATG 3 cut(s) 31, 499, 681
BseLI CCNNNNNNNGG 2 cut(s) 147, 494
BseMI GCAATG 2 cut(s) 546, 663
BseMII CTCAG 3 cut(s) 80, 117, 124
BseNI ACTGG 1 cut(s) 445
BseSI GKGCMC 1 cut(s) 153
BseXI GCAGC 5 cut(s) 109, 259, 287, 290, 568
BsgI GTGCAG 1 cut(s) 435
BshFI GGCC 1 cut(s) 615
BshTI ACCGGT 1 cut(s) 554
BsiSI CCGG 3 cut(s) 185, 264, 555
BslI CCNNNNNNNGG 2 cut(s) 147, 494
BsmAI GTCTC 2 cut(s) 113, 819
BsnI GGCC 1 cut(s) 615
Bso31I GGTCTC 2 cut(s) 113, 819
Bsp1286I GDGCHC 1 cut(s) 153
Bsp143I GATC 1 cut(s) 427
BspANI GGCC 1 cut(s) 615
BspCNI CTCAG 3 cut(s) 81, 118, 123
BspLI GGNNCC 2 cut(s) 300, 429
BspMAI CTGCAG 1 cut(s) 277
BspMI ACCTGC 1 cut(s) 823
BspPI GGATC 2 cut(s) 422, 435
BspTNI GGTCTC 2 cut(s) 113, 819
BsrDI GCAATG 2 cut(s) 546, 663
BsrFI RCCGGY 2 cut(s) 263, 554
BsrI ACTGG 1 cut(s) 445
BssAI RCCGGY 2 cut(s) 263, 554
BssECI CCNNGG 3 cut(s) 309, 487, 488
BssMI GATC 1 cut(s) 427
BssT1I CCWWGG 1 cut(s) 309
Bst2UI CCWGG 3 cut(s) 363, 489, 729
Bst4CI ACNGT 2 cut(s) 46, 787
Bst6I CTCTTC 1 cut(s) 66
BstDEI CTNAG 3 cut(s) 89, 110, 126
BstF5I GGATG 3 cut(s) 31, 499, 681
BstKTI GATC 1 cut(s) 430
BstMAI GTCTC 2 cut(s) 113, 819
BstMBI GATC 1 cut(s) 427
BstMWI GCNNNNNNNGC 7 cut(s) 157, 178, 269, 278, 287, 296, 305
BstNI CCWGG 3 cut(s) 363, 489, 729
BstSCI CCNGG 3 cut(s) 361, 487, 727
BstSFI CTRYAG 1 cut(s) 273
BstSLI GKGCMC 1 cut(s) 153
BstV1I GCAGC 5 cut(s) 109, 259, 287, 290, 568
BstX2I RGATCY 1 cut(s) 427
BstXI CCANNNNNNTGG 2 cut(s) 189, 670
BstYI RGATCY 1 cut(s) 427
BsuRI GGCC 1 cut(s) 615
BtsCI GGATG 3 cut(s) 31, 499, 681
BtsI GCAGTG 2 cut(s) 121, 546
BtsIMutI CAGTG 2 cut(s) 121, 546
BveI ACCTGC 1 cut(s) 823
Cfr10I RCCGGY 2 cut(s) 263, 554
Cfr13I GGNCC 2 cut(s) 313, 613
Csp6I GTAC 1 cut(s) 700
CspAI ACCGGT 1 cut(s) 554
CviAII CATG 3 cut(s) 286, 697, 778
CviQI GTAC 1 cut(s) 700
DdeI CTNAG 3 cut(s) 89, 110, 126
DpnI GATC 1 cut(s) 429
DpnII GATC 1 cut(s) 427
DrdI GACNNNNNNGTC 1 cut(s) 790
DseDI GACNNNNNNGTC 1 cut(s) 790
Eam1104I CTCTTC 1 cut(s) 66
EarI CTCTTC 1 cut(s) 66
Eco130I CCWWGG 1 cut(s) 309
Eco31I GGTCTC 2 cut(s) 113, 819
Eco47I GGWCC 1 cut(s) 313
Eco57I CTGAAG 1 cut(s) 36
EcoO109I RGGNCCY 1 cut(s) 313
EcoRI GAATTC 1 cut(s) 765
EcoRII CCWGG 3 cut(s) 361, 487, 727
EcoT14I CCWWGG 1 cut(s) 309
ErhI CCWWGG 1 cut(s) 309
FaeI CATG 3 cut(s) 289, 700, 781
FatI CATG 3 cut(s) 285, 696, 777
FauNDI CATATG 1 cut(s) 656
FblI GTMKAC 1 cut(s) 415
Fnu4HI GCNGC 5 cut(s) 123, 273, 276, 279, 582
FokI GGATG 3 cut(s) 38, 506, 688
Fsp4HI GCNGC 5 cut(s) 123, 273, 276, 279, 582
FspBI CTAG 1 cut(s) 356
GluI GCNGC 5 cut(s) 123, 273, 276, 279, 582
HaeIII GGCC 1 cut(s) 615
HapII CCGG 3 cut(s) 185, 264, 555
Hin1II CATG 3 cut(s) 289, 700, 781
HindIII AAGCTT 2 cut(s) 158, 383
HinfI GANTC 5 cut(s) 85, 135, 464, 604, 706
HpaII CCGG 3 cut(s) 185, 264, 555
HphI GGTGA 5 cut(s) 130, 377, 401, 473, 578
Hpy166II GTNNAC 2 cut(s) 416, 521
Hpy188I TCNGA 1 cut(s) 90
Hpy188III TCNNGA 3 cut(s) 320, 631, 710
Hpy8I GTNNAC 2 cut(s) 416, 521
HpyAV CCTTC 6 cut(s) 31, 321, 326, 416, 577, 752
HpyCH4III ACNGT 2 cut(s) 46, 787
HpyCH4V TGCA 4 cut(s) 275, 452, 638, 654
HpyF10VI GCNNNNNNNGC 7 cut(s) 157, 178, 269, 278, 287, 296, 305
HpyF3I CTNAG 3 cut(s) 89, 110, 126
Hsp92II CATG 3 cut(s) 289, 700, 781
Kzo9I GATC 1 cut(s) 427
LmnI GCTCC 2 cut(s) 304, 840
Lsp1109I GCAGC 5 cut(s) 109, 259, 287, 290, 568
LweI GCATC 3 cut(s) 16, 334, 397
MaeI CTAG 1 cut(s) 356
MaeIII GTNAC 3 cut(s) 389, 475, 796
MalI GATC 1 cut(s) 429
MboI GATC 1 cut(s) 427
MboII GAAGA 2 cut(s) 83, 176
MfeI CAATTG 3 cut(s) 639, 771, 865
MflI RGATCY 1 cut(s) 427
MhlI GDGCHC 1 cut(s) 153
MlyI GAGTC 1 cut(s) 129
MnlI CCTC 5 cut(s) 67, 97, 112, 121, 244
MseI TTAA 1 cut(s) 381
MslI CAYNNNNRTG 1 cut(s) 668
MspI CCGG 3 cut(s) 185, 264, 555
MspR9I CCNGG 3 cut(s) 363, 489, 729
MunI CAATTG 3 cut(s) 639, 771, 865
MvaI CCWGG 3 cut(s) 363, 489, 729
MwoI GCNNNNNNNGC 7 cut(s) 157, 178, 269, 278, 287, 296, 305
NdeI CATATG 1 cut(s) 656
NdeII GATC 1 cut(s) 427
NlaIII CATG 3 cut(s) 289, 700, 781
NlaIV GGNNCC 2 cut(s) 300, 429
NmuCI GTSAC 3 cut(s) 389, 475, 796
PasI CCCWGGG 1 cut(s) 488
PfeI GAWTC 4 cut(s) 85, 464, 604, 706
PfoI TCCNGGA 1 cut(s) 727
PinAI ACCGGT 1 cut(s) 554
PkrI GCNGC 5 cut(s) 124, 274, 277, 280, 583
PleI GAGTC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 129
PpuMI RGGWCCY 1 cut(s) 313
Psp5II RGGWCCY 1 cut(s) 313
Psp6I CCWGG 3 cut(s) 361, 487, 727
PspGI CCWGG 3 cut(s) 361, 487, 727
PspN4I GGNNCC 2 cut(s) 300, 429
PspPI GGNCC 2 cut(s) 313, 613
PspPPI RGGWCCY 1 cut(s) 313
PstI CTGCAG 1 cut(s) 277
PsuI RGATCY 1 cut(s) 427
RsaI GTAC 1 cut(s) 701
RsaNI GTAC 1 cut(s) 700
RseI CAYNNNNRTG 1 cut(s) 668
SaqAI TTAA 1 cut(s) 381
SatI GCNGC 5 cut(s) 123, 273, 276, 279, 582
Sau3AI GATC 1 cut(s) 427
Sau96I GGNCC 2 cut(s) 313, 613
SchI GAGTC 1 cut(s) 129
ScrFI CCNGG 3 cut(s) 363, 489, 729
SduI GDGCHC 1 cut(s) 153
SfaNI GCATC 3 cut(s) 16, 334, 397
SfcI CTRYAG 1 cut(s) 273
SgrAI CRCCGGYG 1 cut(s) 554
SinI GGWCC 1 cut(s) 313
SmiMI CAYNNNNRTG 1 cut(s) 668
SspMI CTAG 1 cut(s) 356
StyD4I CCNGG 3 cut(s) 361, 487, 727
StyI CCWWGG 1 cut(s) 309
TaaI ACNGT 2 cut(s) 46, 787
TaqI TCGA 1 cut(s) 319
TaqII GACCGA 1 cut(s) 729
TfiI GAWTC 4 cut(s) 85, 464, 604, 706
Tru1I TTAA 1 cut(s) 381
Tru9I TTAA 1 cut(s) 381
TscAI CASTG 2 cut(s) 121, 546
TseFI GTSAC 3 cut(s) 389, 475, 796
TseI GCWGC 5 cut(s) 122, 272, 275, 278, 581
Tsp45I GTSAC 3 cut(s) 389, 475, 796
TspDTI ATGAA 2 cut(s) 235, 351
TspRI CASTG 2 cut(s) 121, 546
VpaK11BI GGWCC 1 cut(s) 313
XapI RAATTY 2 cut(s) 646, 765
XcmI CCANNNNNNNNNTGG 1 cut(s) 569
XmiI GTMKAC 1 cut(s) 415
XspI CTAG 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.