Rorug05G0246300

Plasma membrane ATPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000545
Physical Location & Seq
Reverse (-)
26475725 .. 26478331
2607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0246300.1

Sequence Viewer

Length: 1668 bp
ATGGCATTGTTGAAGCAAATTACTGAAAGAATACTAGTCATATGGGCTCTGATTACTAGCTGGTCGAAGTATCAAAGAAACCGTGAAGGGAATATGGAACTTCTGAACAGATTGTTAGAAGAGCTAGATAGCCAAACTGCAGATATAGAGCAAAAGCTAGATGCTGAGCCTCCTCATCCAATCAAAAGACAAGAAGATGAAGTCTATGAGTGGTTGGAAAATGTGGAAAGGATCAAAACTGAAGTGCAAACCATTTACCAAGTCGCTGAAAGGAACTATCTCTCACCTGAACATTTCGGAAAGCTTGTTAATGAAAAAATTGTAGAGGTTAAGGAGTTGCTCCAGGAAGGAAAATTGTACACTGGGATTTCCGCAGAGAAGTGTTTCAAGTACTTGATCATTGGTGGTGGAGTTGCAGCTGGATATGCAGCCAGGGAGTTTGTCAAACAAGGGCTCAAGCCAGGTGAGTTAGCAATCATATCAAAAGAAGCAGTGGCGCCTTATGAACGTCCTGCACTTAGTAAGGCCTACCTGTTTCCTGAGGGAGCTGTAAGACTTCCAGGGTTCAATGTCTGCGTTGGAAGTGGAGGTGAGAGGCTGCTACCTGAGTGGTATGTGGAGAAAGGTATTGAATTAATTCTTAGTACAGAAATTATCAAAGCAGATCTTGATTCGAAGATCCTCACCAGTGCAGCTGGGATGAAATATAGTTATGATATTTTGATAATTGCAACTGGTTCCAGAGCACTAAGGTTGACAGAGTTTGGTGTACAAGGAGCTGATGCAAAGAACATTTTCTACTTGAGAGAAATCAGTGATGCTGATAAGCTTGTAGAAGAAATTAGAGCCAAGAAAAAGGGAAAGGTAGTAGTTGTTGGAGGAGGATACATTGGTGTTGAAGTTGGAGCTGCTATGAGAATCAACCAGTTTGATGTTACCATAGTTTATCGCCAACAATGGTTCATGGCACGGCTTTTCACTCGAGAGATAGCTGCTTTCTATGAGGCTTACTATGAAAACAAAGGAATCAAACTCATCAAAGGTACAGCTGCTGTTGCCTTTGATTCTGGTGCGAATGGAGAGGTAAAAGCAGTCAAACTCGAGGATGGTAGGGTGCTTGAAGCTGACATTGTTGTTGCTGGTGTTGGTGCAAAACCTCTCATTGAGTTATTTGAAGGGCAGCTTGATAAAGCTAAAGATGGAATCAAAACTGATGGATTCTTTGAAACAGATGATCCCGACGTATATGCAGTAGGCGATGTGGCTACTTTCCCTATAAAGTTGTACAATGACATGAGAAGAGTTGAGCATGTTGACCATGCTAGGAAATCAGCAGAGCAAGCGGTAAAAGTTATCAAGGCAAGTGAAGAAAATAGATCTATTCCAGAGTATGATTGTCTTCCATACTTCTATTCGCGCGTCTTCAATCTTTCGTGGTCGTTTTATGGAGACAATGTGGGCAATCCTGTGCTATTTGGAGACAACAATCCGGCATCAGCGAAACCAAAGTTTGGAACAGCATGGATCAAGAATGGGAAGATTGTGGGAGTTTTCTTAGAGGGAGGGACAGCTGAAGAAAACAAGGCTATTGCCCAAATTGCGAGGGTCCAACCTCCAGCTGATAAGTATTTGGATCAGCTGAGAAAGGGTGATTATTTCTTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

555

Amino Acids

62.0

Weight (kDa)

5.44

Isoelectric Point (pI)

28.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 130 - 445 2.5e-56 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 288 - 370 1.1e-15 Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C PF21791 467 - 549 3e-34 Monodehydroascorbate reductase 3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000545)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g36571
pyrus_communis pycom02g01560 pycom08g10820 pycom09g05820 pycom13g21850 pycom14g16010
rosa_chinensis RchiOBHm_Chr2g0094861 RchiOBHm_Chr2g0124911 RchiOBHm_Chr2g0138581 RchiOBHm_Chr2g0160851 RchiOBHm_Chr4g0407411
rosa_laevigata RLG00000001652 RLG00000001872 RLG00000002037 RLG00000003076 RLG00000006419 RLG00000016771 RLG00000017383 RLG00000022851 RLG00000030563 RLG00000033869 RLG00000034176
rosa_multiflora Rmu_co8013424.1_g000001 Rmu_co8016716.1_g000001 Rmu_co8183472.1_g000001 Rmu_co8254047.1_g000001 Rmu_co8354891.1_g000001 Rmu_sc0000124.1_g000003 Rmu_sc0002132.1_g000027 Rmu_sc0003007.1_g000011 Rmu_sc0003221.1_g000096 Rmu_sc0003221.1_g000097 Rmu_sc0005119.1_g000004 Rmu_sc0008057.1_g000005 Rmu_sc0034532.1_g000001 Rmu_sc0036406.1_g000001 Rmu_ssc0000008.1_g000009
rosa_roxburghii Rroxscaffold_1G00030520 Rroxscaffold_2G00107360 Rroxscaffold_2G00153420 Rroxscaffold_5G00335750 Rroxscaffold_5G00351760 Rroxscaffold_5G00352080 Rroxscaffold_6G00419090
rosa_rugosa Rorug01G0341800 Rorug01G0341900 Rorug02G0180200 Rorug02G0180300 Rorug03G0186100 Rorug03G0186200 Rorug03G0284800 Rorug04G0104500 Rorug05G0246300 Rorug06G0108400 Rorug06G0471500 Rorug06G0510400
rosa_samantha Rh1AG159000 Rh1CG148200 Rh1CG189900 Rh2AG552800 Rh2BG473900 Rh2BG612100 Rh2BG612300 Rh2DG094500 Rh2DG482600 Rh3BG234000 Rh3CG320000 Rh4AG144200 Rh4BG127900 Rh4DG097300 Rh5AG128900 Rh5AG381200 Rh5BG363000 Rh5DG491900 Rh6AG048400 Rh6BG168100 Rh6CG005800 Rh6DG006000 Rh7AG255100 Rh7BG360600 Rh7CG271700 Rh7CG482300 Rh7DG451200
rosa_wichuraiana Rw4G004970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 496
AccB7I CCANNNNNTGG 1 cut(s) 1511
AccII CGCG 2 cut(s) 1417, 1419
AciI CCGC 2 cut(s) 372, 1343
AclWI GGATC 5 cut(s) 239, 673, 1229, 1532, 1641
AcuI CTGAAG 2 cut(s) 261, 1593
AcyI GRCGYC 1 cut(s) 497
AfaI GTAC 6 cut(s) 359, 392, 646, 771, 1045, 1286
AfiI CCNNNNNNNGG 1 cut(s) 1511
AgsI TTSAA 9 cut(s) 13, 388, 568, 632, 899, 1121, 1175, 1226, 1426
AhlI ACTAGT 1 cut(s) 34
AjnI CCWGG 4 cut(s) 342, 431, 460, 559
Alw21I GWGCWC 1 cut(s) 748
Alw26I GTCTC 2 cut(s) 1443, 1473
AlwI GGATC 5 cut(s) 239, 673, 1229, 1532, 1641
AlwNI CAGNNNCTG 1 cut(s) 1052
Ama87I CYCGRG 2 cut(s) 981, 1100
AoxI GGCC 1 cut(s) 525
ApeKI GCWGC 8 cut(s) 416, 428, 598, 692, 908, 992, 1049, 1180
AseI ATTAAT 1 cut(s) 635
Asp700I GAANNNNTTC 3 cut(s) 383, 636, 794
AspLEI GCGC 2 cut(s) 499, 1419
AspS9I GGNCC 1 cut(s) 1606
AsuHPI GGTGA 5 cut(s) 276, 476, 602, 676, 1661
AsuII TTCGAA 1 cut(s) 674
AvaI CYCGRG 2 cut(s) 981, 1100
AvaII GGWCC 1 cut(s) 1606
AxyI CCTNAGG 1 cut(s) 540
BaeI ACNNNNGTAYC 2 cut(s) 877, 910
BanI GGYRCC 1 cut(s) 496
BanII GRGCYC 2 cut(s) 49, 456
BbsI GAAGAC 2 cut(s) 1391, 1414
Bbv12I GWGCWC 1 cut(s) 748
BbvI GCAGC 8 cut(s) 428, 440, 585, 704, 895, 979, 1036, 1192
BccI CCATC 3 cut(s) 1100, 1193, 1208
BceAI ACGGC 1 cut(s) 986
BcgI CGANNNNNNTGC 2 cut(s) 1229, 1263
BciT130I CCWGG 4 cut(s) 344, 433, 462, 561
BciVI GTATCC 1 cut(s) 878
BclI TGATCA 1 cut(s) 396
BcoDI GTCTC 2 cut(s) 1443, 1473
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 5 cut(s) 35, 57, 125, 158, 1323
BfmI CTRYAG 1 cut(s) 138
BfoI RGCGCY 1 cut(s) 500
BfuI GTATCC 1 cut(s) 878
BglII AGATCT 2 cut(s) 664, 1376
BisI GCNGC 8 cut(s) 417, 429, 599, 693, 909, 993, 1050, 1181
BlpI GCTNAGC 1 cut(s) 165
BlsI GCNGC 8 cut(s) 418, 430, 600, 694, 910, 994, 1051, 1182
BmcAI AGTACT 1 cut(s) 392
Bme1390I CCNGG 4 cut(s) 344, 433, 462, 561
Bme18I GGWCC 1 cut(s) 1606
BmeT110I CYCGRG 2 cut(s) 981, 1100
BmgT120I GGNCC 1 cut(s) 1606
BmiI GGNNCC 3 cut(s) 498, 739, 1607
BmrFI CCNGG 4 cut(s) 344, 433, 462, 561
BmrI ACTGGG 1 cut(s) 372
BmsI GCATC 4 cut(s) 151, 772, 808, 1502
BmuI ACTGGG 1 cut(s) 372
BpiI GAAGAC 2 cut(s) 1391, 1414
BpmI CTGGAG 2 cut(s) 326, 1599
Bpu1102I GCTNAGC 1 cut(s) 165
Bpu14I TTCGAA 1 cut(s) 674
BpuEI CTTGAG 2 cut(s) 440, 823
BsaHI GRCGYC 1 cut(s) 497
BsaJI CCNNGG 2 cut(s) 432, 560
BsaXI ACNNNNNCTCC 2 cut(s) 1440, 1470
Bsc4I CCNNNNNNNGG 1 cut(s) 1511
Bse1I ACTGG 4 cut(s) 367, 687, 739, 925
Bse21I CCTNAGG 1 cut(s) 540
BseBI CCWGG 4 cut(s) 344, 433, 462, 561
BseDI CCNNGG 2 cut(s) 432, 560
BseGI GGATG 3 cut(s) 175, 705, 1111
BseLI CCNNNNNNNGG 1 cut(s) 1511
BseMII CTCAG 4 cut(s) 156, 531, 597, 1631
BseNI ACTGG 4 cut(s) 367, 687, 739, 925
BseRI GAGGAG 2 cut(s) 162, 894
BseXI GCAGC 8 cut(s) 428, 440, 585, 704, 895, 979, 1036, 1192
BseYI CCCAGC 1 cut(s) 695
BsgI GTGCAG 2 cut(s) 498, 711
Bsh1236I CGCG 2 cut(s) 1417, 1419
BshFI GGCC 1 cut(s) 527
BshNI GGYRCC 1 cut(s) 496
BsiHKAI GWGCWC 1 cut(s) 748
BsiHKCI CYCGRG 2 cut(s) 981, 1100
BsiSI CCGG 1 cut(s) 1490
BslFI GGGAC 1 cut(s) 1579
BslI CCNNNNNNNGG 1 cut(s) 1511
BsmAI GTCTC 2 cut(s) 1443, 1473
BsmFI GGGAC 1 cut(s) 1579
BsnI GGCC 1 cut(s) 527
BsoBI CYCGRG 2 cut(s) 981, 1100
Bsp119I TTCGAA 1 cut(s) 674
Bsp1286I GDGCHC 3 cut(s) 49, 456, 748
Bsp1407I TGTACA 3 cut(s) 357, 769, 1284
Bsp143I GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
Bsp1720I GCTNAGC 1 cut(s) 165
BspACI CCGC 2 cut(s) 372, 1343
BspANI GGCC 1 cut(s) 527
BspCNI CTCAG 4 cut(s) 157, 532, 598, 1632
BspFNI CGCG 2 cut(s) 1417, 1419
BspLI GGNNCC 3 cut(s) 498, 739, 1607
BspMAI CTGCAG 1 cut(s) 142
BspPI GGATC 5 cut(s) 239, 673, 1229, 1532, 1641
BspQI GCTCTTC 1 cut(s) 114
BspT104I TTCGAA 1 cut(s) 674
BspT107I GGYRCC 1 cut(s) 496
BsrGI TGTACA 3 cut(s) 357, 769, 1284
BsrI ACTGG 4 cut(s) 367, 687, 739, 925
BssECI CCNNGG 2 cut(s) 432, 560
BssMI GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
BssNI GRCGYC 1 cut(s) 497
Bst2UI CCWGG 4 cut(s) 344, 433, 462, 561
Bst4CI ACNGT 1 cut(s) 83
Bst6I CTCTTC 2 cut(s) 114, 1294
BstACI GRCGYC 1 cut(s) 497
BstAUI TGTACA 3 cut(s) 357, 769, 1284
BstBI TTCGAA 1 cut(s) 674
BstC8I GCNNGC 1 cut(s) 1341
BstDEI CTNAG 8 cut(s) 165, 518, 540, 606, 641, 749, 1555, 1640
BstF5I GGATG 3 cut(s) 175, 705, 1111
BstFNI CGCG 2 cut(s) 1417, 1419
BstH2I RGCGCY 1 cut(s) 500
BstHHI GCGC 2 cut(s) 499, 1419
BstKTI GATC 8 cut(s) 234, 399, 667, 681, 1237, 1379, 1527, 1636
BstMAI GTCTC 2 cut(s) 1443, 1473
BstMBI GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
BstMWI GCNNNNNNNGC 4 cut(s) 425, 1055, 1340, 1598
BstNI CCWGG 4 cut(s) 344, 433, 462, 561
BstNSI RCATGY 1 cut(s) 1313
BstSCI CCNGG 4 cut(s) 342, 431, 460, 559
BstSFI CTRYAG 1 cut(s) 138
BstUI CGCG 2 cut(s) 1417, 1419
BstV1I GCAGC 8 cut(s) 428, 440, 585, 704, 895, 979, 1036, 1192
BstV2I GAAGAC 2 cut(s) 1391, 1414
BstX2I RGATCY 3 cut(s) 664, 678, 1376
BstYI RGATCY 3 cut(s) 664, 678, 1376
Bsu36I CCTNAGG 1 cut(s) 540
BsuI GTATCC 1 cut(s) 878
BsuRI GGCC 1 cut(s) 527
BtgZI GCGATG 1 cut(s) 1272
BtsCI GGATG 3 cut(s) 175, 705, 1111
BtsI GCAGTG 1 cut(s) 498
BtsIMutI CAGTG 4 cut(s) 360, 498, 694, 820
Cac8I GCNNGC 1 cut(s) 1341
CaiI CAGNNNCTG 1 cut(s) 1052
CfoI GCGC 2 cut(s) 499, 1419
Cfr13I GGNCC 1 cut(s) 1606
CseI GACGC 1 cut(s) 1408
Csp6I GTAC 6 cut(s) 358, 391, 645, 770, 1044, 1285
CviAII CATG 5 cut(s) 964, 1294, 1310, 1319, 1521
CviQI GTAC 6 cut(s) 358, 391, 645, 770, 1044, 1285
DdeI CTNAG 8 cut(s) 165, 518, 540, 606, 641, 749, 1555, 1640
DinI GGCGCC 1 cut(s) 498
DpnI GATC 8 cut(s) 233, 398, 666, 680, 1236, 1378, 1526, 1635
DpnII GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
Eam1104I CTCTTC 2 cut(s) 114, 1294
EarI CTCTTC 2 cut(s) 114, 1294
Eco147I AGGCCT 1 cut(s) 527
Eco24I GRGCYC 2 cut(s) 49, 456
Eco47I GGWCC 1 cut(s) 1606
Eco57I CTGAAG 2 cut(s) 261, 1593
Eco81I CCTNAGG 1 cut(s) 540
Eco88I CYCGRG 2 cut(s) 981, 1100
EcoRII CCWGG 4 cut(s) 342, 431, 460, 559
EcoT38I GRGCYC 2 cut(s) 49, 456
EgeI GGCGCC 1 cut(s) 498
EheI GGCGCC 1 cut(s) 498
FaeI CATG 5 cut(s) 967, 1297, 1313, 1322, 1524
FalI AAGNNNNNCTT 4 cut(s) 651, 683, 1167, 1199
FaqI GGGAC 1 cut(s) 1579
FatI CATG 5 cut(s) 963, 1293, 1309, 1318, 1520
FauNDI CATATG 1 cut(s) 41
FbaI TGATCA 1 cut(s) 396
Fnu4HI GCNGC 8 cut(s) 417, 429, 599, 693, 909, 993, 1050, 1181
FokI GGATG 3 cut(s) 162, 712, 1118
FriOI GRGCYC 2 cut(s) 49, 456
Fsp4HI GCNGC 8 cut(s) 417, 429, 599, 693, 909, 993, 1050, 1181
FspBI CTAG 5 cut(s) 35, 57, 125, 158, 1323
GlaI GCGC 2 cut(s) 498, 1418
GluI GCNGC 8 cut(s) 417, 429, 599, 693, 909, 993, 1050, 1181
GsaI CCCAGC 1 cut(s) 699
GsuI CTGGAG 2 cut(s) 326, 1599
HaeII RGCGCY 1 cut(s) 500
HaeIII GGCC 1 cut(s) 527
HapII CCGG 1 cut(s) 1490
HgaI GACGC 1 cut(s) 1408
HhaI GCGC 2 cut(s) 499, 1419
Hin1I GRCGYC 1 cut(s) 497
Hin1II CATG 5 cut(s) 967, 1297, 1313, 1322, 1524
Hin6I GCGC 2 cut(s) 497, 1417
HinP1I GCGC 2 cut(s) 497, 1417
HincII GTYRAC 2 cut(s) 756, 1315
HindII GTYRAC 2 cut(s) 756, 1315
HindIII AAGCTT 2 cut(s) 302, 827
HinfI GANTC 6 cut(s) 671, 918, 1026, 1064, 1203, 1218
HpaII CCGG 1 cut(s) 1490
HphI GGTGA 5 cut(s) 276, 476, 602, 676, 1661
Hpy166II GTNNAC 4 cut(s) 360, 756, 770, 1315
Hpy188I TCNGA 3 cut(s) 51, 105, 299
Hpy188III TCNNGA 7 cut(s) 539, 668, 741, 983, 1238, 1385, 1528
Hpy8I GTNNAC 4 cut(s) 360, 756, 770, 1315
Hpy99I CGWCG 1 cut(s) 1244
HpyAV CCTTC 3 cut(s) 80, 341, 1169
HpyCH4III ACNGT 1 cut(s) 83
HpyCH4IV ACGT 2 cut(s) 508, 1242
HpyF10VI GCNNNNNNNGC 4 cut(s) 425, 1055, 1340, 1598
HpyF3I CTNAG 8 cut(s) 165, 518, 540, 606, 641, 749, 1555, 1640
HpySE526I ACGT 2 cut(s) 508, 1242
Hsp92I GRCGYC 1 cut(s) 497
Hsp92II CATG 5 cut(s) 967, 1297, 1313, 1322, 1524
HspAI GCGC 2 cut(s) 497, 1417
KasI GGCGCC 1 cut(s) 496
Ksp22I TGATCA 1 cut(s) 396
Kzo9I GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
LguI GCTCTTC 1 cut(s) 114
LmnI GCTCC 4 cut(s) 345, 545, 776, 905
Lsp1109I GCAGC 8 cut(s) 428, 440, 585, 704, 895, 979, 1036, 1192
LweI GCATC 4 cut(s) 151, 772, 808, 1502
MaeI CTAG 5 cut(s) 35, 57, 125, 158, 1323
MaeII ACGT 2 cut(s) 508, 1242
MaeIII GTNAC 1 cut(s) 934
MalI GATC 8 cut(s) 233, 398, 666, 680, 1236, 1378, 1526, 1635
MboI GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
MflI RGATCY 3 cut(s) 664, 678, 1376
MhlI GDGCHC 3 cut(s) 49, 456, 748
MluCI AATT 9 cut(s) 18, 318, 353, 632, 636, 651, 726, 840, 1596
Mly113I GGCGCC 1 cut(s) 497
MmeI TCCRAC 5 cut(s) 195, 559, 856, 883, 1633
MroXI GAANNNNTTC 3 cut(s) 383, 636, 794
MseI TTAA 3 cut(s) 309, 330, 635
MspA1I CMGCKG 6 cut(s) 419, 695, 1049, 1571, 1619, 1639
MspI CCGG 1 cut(s) 1490
MspR9I CCNGG 4 cut(s) 344, 433, 462, 561
MvaI CCWGG 4 cut(s) 344, 433, 462, 561
MvnI CGCG 2 cut(s) 1417, 1419
MwoI GCNNNNNNNGC 4 cut(s) 425, 1055, 1340, 1598
NarI GGCGCC 1 cut(s) 497
NdeI CATATG 1 cut(s) 41
NdeII GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
NlaIII CATG 5 cut(s) 967, 1297, 1313, 1322, 1524
NlaIV GGNNCC 3 cut(s) 498, 739, 1607
NspI RCATGY 1 cut(s) 1313
NspV TTCGAA 1 cut(s) 674
PaeR7I CTCGAG 2 cut(s) 981, 1100
PceI AGGCCT 1 cut(s) 527
PciSI GCTCTTC 1 cut(s) 114
PdmI GAANNNNTTC 3 cut(s) 383, 636, 794
PfeI GAWTC 6 cut(s) 671, 918, 1026, 1064, 1203, 1218
PflMI CCANNNNNTGG 1 cut(s) 1511
PfoI TCCNGGA 1 cut(s) 342
PkrI GCNGC 8 cut(s) 418, 430, 600, 694, 910, 994, 1051, 1182
PluTI GGCGCC 1 cut(s) 500
PshBI ATTAAT 1 cut(s) 635
Psp6I CCWGG 4 cut(s) 342, 431, 460, 559
PspFI CCCAGC 1 cut(s) 695
PspGI CCWGG 4 cut(s) 342, 431, 460, 559
PspN4I GGNNCC 3 cut(s) 498, 739, 1607
PspPI GGNCC 1 cut(s) 1606
PspXI VCTCGAGB 1 cut(s) 1100
PsrI GAACNNNNNNTAC 2 cut(s) 782, 814
PstI CTGCAG 1 cut(s) 142
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 3 cut(s) 664, 678, 1376
PvuII CAGCTG 6 cut(s) 419, 695, 1049, 1571, 1619, 1639
RsaI GTAC 6 cut(s) 359, 392, 646, 771, 1045, 1286
RsaNI GTAC 6 cut(s) 358, 391, 645, 770, 1044, 1285
SapI GCTCTTC 1 cut(s) 114
SaqAI TTAA 3 cut(s) 309, 330, 635
SatI GCNGC 8 cut(s) 417, 429, 599, 693, 909, 993, 1050, 1181
Sau3AI GATC 8 cut(s) 231, 396, 664, 678, 1234, 1376, 1524, 1633
Sau96I GGNCC 1 cut(s) 1606
ScaI AGTACT 1 cut(s) 392
ScrFI CCNGG 4 cut(s) 344, 433, 462, 561
SduI GDGCHC 3 cut(s) 49, 456, 748
SfaNI GCATC 4 cut(s) 151, 772, 808, 1502
SfcI CTRYAG 1 cut(s) 138
SfoI GGCGCC 1 cut(s) 498
Sfr274I CTCGAG 2 cut(s) 981, 1100
SfuI TTCGAA 1 cut(s) 674
SinI GGWCC 1 cut(s) 1606
SlaI CTCGAG 2 cut(s) 981, 1100
SmlI CTYRAG 4 cut(s) 455, 802, 981, 1100
SmoI CTYRAG 4 cut(s) 455, 802, 981, 1100
SpeI ACTAGT 1 cut(s) 34
Sse9I AATT 9 cut(s) 18, 318, 353, 632, 636, 651, 726, 840, 1596
SseBI AGGCCT 1 cut(s) 527
SsiI CCGC 2 cut(s) 372, 1343
SspDI GGCGCC 1 cut(s) 496
SspMI CTAG 5 cut(s) 35, 57, 125, 158, 1323
StuI AGGCCT 1 cut(s) 527
StyD4I CCNGG 4 cut(s) 342, 431, 460, 559
TaaI ACNGT 1 cut(s) 83
TaiI ACGT 2 cut(s) 511, 1245
TaqI TCGA 4 cut(s) 65, 674, 982, 1101
TasI AATT 9 cut(s) 18, 318, 353, 632, 636, 651, 726, 840, 1596
TatI WGTACW 5 cut(s) 357, 390, 644, 769, 1284
TfiI GAWTC 6 cut(s) 671, 918, 1026, 1064, 1203, 1218
Tru1I TTAA 3 cut(s) 309, 330, 635
Tru9I TTAA 3 cut(s) 309, 330, 635
TscAI CASTG 4 cut(s) 367, 498, 694, 820
TseI GCWGC 8 cut(s) 416, 428, 598, 692, 908, 992, 1049, 1180
TspDTI ATGAA 6 cut(s) 213, 327, 519, 716, 952, 1029
TspRI CASTG 4 cut(s) 367, 498, 694, 820
Van91I CCANNNNNTGG 1 cut(s) 1511
VpaK11BI GGWCC 1 cut(s) 1606
VspI ATTAAT 1 cut(s) 635
XceI RCATGY 1 cut(s) 1313
XhoI CTCGAG 2 cut(s) 981, 1100
XmnI GAANNNNTTC 3 cut(s) 383, 636, 794
XspI CTAG 5 cut(s) 35, 57, 125, 158, 1323
ZrmI AGTACT 1 cut(s) 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.