Rorug03G0186100

ATPase 11, plasma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000545
Physical Location & Seq
Reverse (-)
16119499 .. 16121177
1679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0186100.1

Sequence Viewer

Length: 1518 bp
ATGTGCATCTGGATCCCACAGATGTGGTCCATCCAGAGGGATTCTTGGACTTTGAAGCCGCTTATAGTGACCTGTCCCTCAAGGTACCTGGTCCTTGTCTTAGCTGTCGCTCAAACCCCTTGGTGTCCTATAGCAACACAGAAAACTCAAGTTAACACTCAATCTGGTTTTTTCATGGATACCAATCCAGTTCAAGAAGAACACAACCATGTCACCCCCACCTGGGAAATGAACAGTGATCTCTTAGCTTCCATGTATCAGAAGATCGCAGACCCTCCACGACTCCTCAGCAACGCTGCCGGCAAAGCCTCCTGTTGCATCTTCCGAGTCCCGCAGAGCCTCCTCGAGATAAACGGCAAGTCTTACCAGCCCCACATCGTCTCCATCGGCCCCTACCACCGCGGGGAGCCCCACCTCAGAATGATCGAGGAGCACAAGTGGCGCTACCTGGGCTCTCTGCTTTCAAGAACAGAGCCCAAAGGGTTGACTCTCCAGCACTACTTGAAGTCCATAGAGCCAATGGAAGCTAGAGCCAGGGAGTGTTACTCTGAGACCATCCATCTCAGCACTGATGAGTTCCTAGAAATGATGGTTGTTGATGGTTGCTTCTTGATTGAGTTGTTTCGAAAAGTTGGGCATGTGGTTCGGTTTGAGCGTGATGATCCACTCATTAATATGTTTTGGATACTACCGTTTATGGTCAGGGATTTTCTTCGACTTGAGAACCAAATGCCCTACTTTGTTCTTGAGCACTTGTATGATCTGATAACCAAGGCCGAAGATCGTAAAGACTCTGTGAAATCCTTGTCCTTGCTTGCTTTGGAATTCTTCAACAACCATATGATGAGGCCTGCCCCTGTCATAGAAAAGCTCCATAGTCTTACAGGTATGCATTTGCTTGACTTGTTGCGGTCAAGTGTGATACCAGCGGGTTATGCAGAGCCACAAAGAAGAAACAGTGCACCAACGCACATAATACATTGTGTGTCTAAGCTTCGTCGCGCTGGTATCAAGCTCAATGTTAAGGAATTCGAAAGCTTCTTGGTGGTCAAATTCAAGCGTGGAGCGATCGAGATGCCATCCATCACAATCGACGATTTCATGTGCGCTTTCTTGTTGAACTGCGTGGCCTATGAGCAGTGCCACAAGTCATGCTCGAAACAGATCACCACTTATGCCACATTCCTCGATTGCCTCGTGAACAGTTACAAGGATGTCGAGTATTTGTGTGACAGAAACATAATGGAGAATTGCTATGGGAACGATGGGGAAATTGCTCGTTTCATTAACAATATGGGGAAGGATGTGGCTTTTGATTATGATAGGTGTTATCTGTCGAAATTGTTCAATGATGTTCATCAGTATTACCGGAATAGTTGGCATGTTCAATGGGCTAGCTTCAAGTACAGATACTTTGACACACCGTGGTCATTTGTTTCGGCCTTTGCTGCTTTAATTTTGCTCATACTGACAGTGCTGCAAACCGTATACTCTGCTTTAAGTTATTATTATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

505

Amino Acids

58.84

Weight (kDa)

6.99

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 107 - 490 6.8e-122 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000545)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g36571
pyrus_communis pycom02g01560 pycom08g10820 pycom09g05820 pycom13g21850 pycom14g16010
rosa_chinensis RchiOBHm_Chr2g0094861 RchiOBHm_Chr2g0124911 RchiOBHm_Chr2g0138581 RchiOBHm_Chr2g0160851 RchiOBHm_Chr4g0407411
rosa_laevigata RLG00000001652 RLG00000001872 RLG00000002037 RLG00000003076 RLG00000006419 RLG00000016771 RLG00000017383 RLG00000022851 RLG00000030563 RLG00000033869 RLG00000034176
rosa_multiflora Rmu_co8013424.1_g000001 Rmu_co8016716.1_g000001 Rmu_co8183472.1_g000001 Rmu_co8254047.1_g000001 Rmu_co8354891.1_g000001 Rmu_sc0000124.1_g000003 Rmu_sc0002132.1_g000027 Rmu_sc0003007.1_g000011 Rmu_sc0003221.1_g000096 Rmu_sc0003221.1_g000097 Rmu_sc0005119.1_g000004 Rmu_sc0008057.1_g000005 Rmu_sc0034532.1_g000001 Rmu_sc0036406.1_g000001 Rmu_ssc0000008.1_g000009
rosa_roxburghii Rroxscaffold_1G00030520 Rroxscaffold_2G00107360 Rroxscaffold_2G00153420 Rroxscaffold_5G00335750 Rroxscaffold_5G00351760 Rroxscaffold_5G00352080 Rroxscaffold_6G00419090
rosa_rugosa Rorug01G0341800 Rorug01G0341900 Rorug02G0180200 Rorug02G0180300 Rorug03G0186100 Rorug03G0186200 Rorug03G0284800 Rorug04G0104500 Rorug05G0246300 Rorug06G0108400 Rorug06G0471500 Rorug06G0510400
rosa_samantha Rh1AG159000 Rh1CG148200 Rh1CG189900 Rh2AG552800 Rh2BG473900 Rh2BG612100 Rh2BG612300 Rh2DG094500 Rh2DG482600 Rh3BG234000 Rh3CG320000 Rh4AG144200 Rh4BG127900 Rh4DG097300 Rh5AG128900 Rh5AG381200 Rh5BG363000 Rh5DG491900 Rh6AG048400 Rh6BG168100 Rh6CG005800 Rh6DG006000 Rh7AG255100 Rh7BG360600 Rh7CG271700 Rh7CG482300 Rh7DG451200
rosa_wichuraiana Rw4G004970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 84
AccB1I GGYRCC 1 cut(s) 84
AccI GTMKAC 1 cut(s) 1488
AccII CGCG 2 cut(s) 402, 1002
AciI CCGC 6 cut(s) 59, 332, 400, 402, 910, 929
AclWI GGATC 3 cut(s) 7, 20, 656
AcsI RAATTY 3 cut(s) 824, 1028, 1052
AdeI CACNNNGTG 1 cut(s) 1425
AfaI GTAC 2 cut(s) 86, 1406
AfiI CCNNNNNNNGG 4 cut(s) 36, 222, 223, 403
AjnI CCWGG 4 cut(s) 87, 221, 447, 533
AleI CACNNNNGTG 1 cut(s) 22
AluBI AGCT 8 cut(s) 104, 248, 527, 871, 994, 1015, 1038, 1398
AluI AGCT 8 cut(s) 104, 248, 527, 871, 994, 1015, 1038, 1398
Alw21I GWGCWC 3 cut(s) 435, 753, 964
Alw26I GTCTC 2 cut(s) 385, 545
Alw44I GTGCAC 1 cut(s) 960
AlwI GGATC 3 cut(s) 7, 20, 656
Ama87I CYCGRG 1 cut(s) 344
AoxI GGCC 5 cut(s) 388, 774, 848, 1128, 1440
ApaLI GTGCAC 1 cut(s) 960
ApeKI GCWGC 3 cut(s) 296, 1448, 1477
ApoI RAATTY 3 cut(s) 824, 1028, 1052
AseI ATTAAT 1 cut(s) 672
Asp700I GAANNNNTTC 1 cut(s) 1343
Asp718I GGTACC 1 cut(s) 84
AspLEI GCGC 3 cut(s) 444, 1004, 1109
AspS9I GGNCC 3 cut(s) 27, 91, 389
AsuHPI GGTGA 2 cut(s) 205, 1159
AsuII TTCGAA 2 cut(s) 625, 1032
AsuNHI GCTAGC 1 cut(s) 1394
AvaI CYCGRG 1 cut(s) 344
AvaII GGWCC 2 cut(s) 27, 91
BaeGI GKGCMC 1 cut(s) 964
BaeI ACNNNNGTAYC 2 cut(s) 677, 710
BamHI GGATCC 1 cut(s) 12
BanI GGYRCC 1 cut(s) 84
BanII GRGCYC 3 cut(s) 411, 455, 477
BauI CACGAG 1 cut(s) 1196
Bbv12I GWGCWC 3 cut(s) 435, 753, 964
BbvCI CCTCAGC 1 cut(s) 287
BbvI GCAGC 3 cut(s) 283, 1435, 1464
BccI CCATC 9 cut(s) 38, 392, 563, 567, 583, 593, 1087, 1091, 1259
BceAI ACGGC 1 cut(s) 370
BcgI CGANNNNNNTGC 4 cut(s) 626, 660, 1057, 1091
BciT130I CCWGG 4 cut(s) 89, 223, 449, 535
BciVI GTATCC 2 cut(s) 172, 678
BcoDI GTCTC 2 cut(s) 385, 545
BfaI CTAG 3 cut(s) 528, 581, 1395
BfmI CTRYAG 1 cut(s) 129
BfoI RGCGCY 1 cut(s) 445
BfuI GTATCC 2 cut(s) 172, 678
BisI GCNGC 4 cut(s) 59, 297, 1449, 1478
BlsI GCNGC 4 cut(s) 60, 298, 1450, 1479
Bme1390I CCNGG 4 cut(s) 89, 223, 449, 535
Bme18I GGWCC 2 cut(s) 27, 91
BmeT110I CYCGRG 1 cut(s) 344
BmgT120I GGNCC 3 cut(s) 27, 91, 389
BmiI GGNNCC 4 cut(s) 14, 86, 391, 408
BmrFI CCNGG 4 cut(s) 89, 223, 449, 535
BmsI GCATC 3 cut(s) 15, 327, 1065
BmtI GCTAGC 1 cut(s) 1398
BplI GAGNNNNNCTC 2 cut(s) 530, 562
BpmI CTGGAG 1 cut(s) 476
Bpu10I CCTNAGC 1 cut(s) 287
Bpu14I TTCGAA 2 cut(s) 625, 1032
BpuEI CTTGAG 4 cut(s) 64, 132, 740, 767
BsaBI GATNNNNATC 2 cut(s) 183, 1356
BsaI GGTCTC 1 cut(s) 545
BsaJI CCNNGG 7 cut(s) 119, 222, 400, 448, 534, 771, 1424
BsaWI WCCGGW 1 cut(s) 1368
BsaXI ACNNNNNCTCC 4 cut(s) 365, 395, 422, 452
Bsc4I CCNNNNNNNGG 4 cut(s) 36, 222, 223, 403
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 1 cut(s) 188
Bse8I GATNNNNATC 2 cut(s) 183, 1356
BseBI CCWGG 4 cut(s) 89, 223, 449, 535
BseDI CCNNGG 7 cut(s) 119, 222, 400, 448, 534, 771, 1424
BseGI GGATG 5 cut(s) 30, 555, 1079, 1219, 1309
BseJI GATNNNNATC 2 cut(s) 183, 1356
BseLI CCNNNNNNNGG 4 cut(s) 36, 222, 223, 403
BseMII CTCAG 4 cut(s) 301, 430, 540, 577
BseNI ACTGG 1 cut(s) 188
BseRI GAGGAG 3 cut(s) 275, 332, 443
BseSI GKGCMC 1 cut(s) 964
BseXI GCAGC 3 cut(s) 283, 1435, 1464
Bsh1236I CGCG 2 cut(s) 402, 1002
Bsh1285I CGRYCG 1 cut(s) 1071
BshFI GGCC 5 cut(s) 390, 776, 850, 1130, 1442
BshNI GGYRCC 1 cut(s) 84
BsiEI CGRYCG 1 cut(s) 1071
BsiHKAI GWGCWC 3 cut(s) 435, 753, 964
BsiHKCI CYCGRG 1 cut(s) 344
BsiSI CCGG 2 cut(s) 300, 1369
BslFI GGGAC 2 cut(s) 60, 314
BslI CCNNNNNNNGG 4 cut(s) 36, 222, 223, 403
BsmAI GTCTC 2 cut(s) 385, 545
BsmBI CGTCTC 1 cut(s) 385
BsmFI GGGAC 2 cut(s) 60, 314
BsnI GGCC 5 cut(s) 390, 776, 850, 1130, 1442
Bso31I GGTCTC 1 cut(s) 545
BsoBI CYCGRG 1 cut(s) 344
Bsp119I TTCGAA 2 cut(s) 625, 1032
Bsp1286I GDGCHC 6 cut(s) 411, 435, 455, 477, 753, 964
Bsp143I GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
BspACI CCGC 6 cut(s) 59, 332, 400, 402, 910, 929
BspANI GGCC 5 cut(s) 390, 776, 850, 1130, 1442
BspCNI CTCAG 4 cut(s) 300, 429, 541, 576
BspFNI CGCG 2 cut(s) 402, 1002
BspLI GGNNCC 4 cut(s) 14, 86, 391, 408
BspOI GCTAGC 1 cut(s) 1398
BspPI GGATC 3 cut(s) 7, 20, 656
BspT104I TTCGAA 2 cut(s) 625, 1032
BspT107I GGYRCC 1 cut(s) 84
BspTNI GGTCTC 1 cut(s) 545
BsrFI RCCGGY 1 cut(s) 299
BsrI ACTGG 1 cut(s) 188
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 7 cut(s) 119, 222, 400, 448, 534, 771, 1424
BssMI GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
BssNAI GTATAC 1 cut(s) 1489
BssSI CACGAG 1 cut(s) 1196
BssT1I CCWWGG 2 cut(s) 119, 771
Bst1107I GTATAC 1 cut(s) 1489
Bst2BI CACGAG 1 cut(s) 1196
Bst2UI CCWGG 4 cut(s) 89, 223, 449, 535
Bst4CI ACNGT 7 cut(s) 236, 693, 959, 1205, 1425, 1474, 1486
BstBI TTCGAA 2 cut(s) 625, 1032
BstC8I GCNNGC 4 cut(s) 301, 816, 852, 1396
BstDEI CTNAG 7 cut(s) 100, 244, 287, 416, 549, 563, 990
BstDSI CCRYGG 2 cut(s) 400, 1424
BstF5I GGATG 5 cut(s) 30, 555, 1079, 1219, 1309
BstFNI CGCG 2 cut(s) 402, 1002
BstH2I RGCGCY 1 cut(s) 445
BstHHI GCGC 3 cut(s) 444, 1004, 1109
BstKTI GATC 9 cut(s) 15, 241, 267, 426, 664, 763, 784, 1071, 1167
BstMAI GTCTC 2 cut(s) 385, 545
BstMBI GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
BstMCI CGRYCG 1 cut(s) 1071
BstMWI GCNNNNNNNGC 5 cut(s) 305, 439, 450, 935, 1448
BstNI CCWGG 4 cut(s) 89, 223, 449, 535
BstNSI RCATGY 2 cut(s) 641, 1385
BstSCI CCNGG 4 cut(s) 87, 221, 447, 533
BstSFI CTRYAG 1 cut(s) 129
BstSLI GKGCMC 1 cut(s) 964
BstUI CGCG 2 cut(s) 402, 1002
BstV1I GCAGC 3 cut(s) 283, 1435, 1464
BstX2I RGATCY 1 cut(s) 12
BstXI CCANNNNNNTGG 1 cut(s) 24
BstYI RGATCY 1 cut(s) 12
BstZ17I GTATAC 1 cut(s) 1489
BsuI GTATCC 2 cut(s) 172, 678
BsuRI GGCC 5 cut(s) 390, 776, 850, 1130, 1442
BtgI CCRYGG 2 cut(s) 400, 1424
BtsCI GGATG 5 cut(s) 30, 555, 1079, 1219, 1309
BtsI GCAGTG 1 cut(s) 1145
BtsIMutI CAGTG 5 cut(s) 241, 567, 964, 1145, 1479
Cac8I GCNNGC 4 cut(s) 301, 816, 852, 1396
CfoI GCGC 3 cut(s) 444, 1004, 1109
Cfr10I RCCGGY 1 cut(s) 299
Cfr13I GGNCC 3 cut(s) 27, 91, 389
Cfr42I CCGCGG 1 cut(s) 403
CsiI ACCWGGT 1 cut(s) 87
Csp6I GTAC 2 cut(s) 85, 1405
CviAII CATG 7 cut(s) 175, 209, 253, 638, 1102, 1152, 1382
CviQI GTAC 2 cut(s) 85, 1405
DdeI CTNAG 7 cut(s) 100, 244, 287, 416, 549, 563, 990
DpnI GATC 9 cut(s) 14, 240, 266, 425, 663, 762, 783, 1070, 1166
DpnII GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
DraIII CACNNNGTG 1 cut(s) 1425
Eco130I CCWWGG 2 cut(s) 119, 771
Eco147I AGGCCT 1 cut(s) 850
Eco24I GRGCYC 3 cut(s) 411, 455, 477
Eco31I GGTCTC 1 cut(s) 545
Eco47I GGWCC 2 cut(s) 27, 91
Eco88I CYCGRG 1 cut(s) 344
EcoRI GAATTC 2 cut(s) 824, 1028
EcoRII CCWGG 4 cut(s) 87, 221, 447, 533
EcoT14I CCWWGG 2 cut(s) 119, 771
EcoT22I ATGCAT 1 cut(s) 894
EcoT38I GRGCYC 3 cut(s) 411, 455, 477
ErhI CCWWGG 2 cut(s) 119, 771
Esp3I CGTCTC 1 cut(s) 385
FaeI CATG 7 cut(s) 178, 212, 256, 641, 1105, 1155, 1385
FaqI GGGAC 2 cut(s) 60, 314
FatI CATG 7 cut(s) 174, 208, 252, 637, 1101, 1151, 1381
FauI CCCGC 3 cut(s) 339, 395, 922
FauNDI CATATG 1 cut(s) 840
FblI GTMKAC 1 cut(s) 1488
Fnu4HI GCNGC 4 cut(s) 59, 297, 1449, 1478
FokI GGATG 5 cut(s) 17, 542, 1066, 1226, 1316
FriOI GRGCYC 3 cut(s) 411, 455, 477
Fsp4HI GCNGC 4 cut(s) 59, 297, 1449, 1478
FspBI CTAG 3 cut(s) 528, 581, 1395
GlaI GCGC 3 cut(s) 443, 1003, 1108
GluI GCNGC 4 cut(s) 59, 297, 1449, 1478
GsuI CTGGAG 1 cut(s) 476
HaeII RGCGCY 1 cut(s) 445
HaeIII GGCC 5 cut(s) 390, 776, 850, 1130, 1442
HapII CCGG 2 cut(s) 300, 1369
HhaI GCGC 3 cut(s) 444, 1004, 1109
Hin1II CATG 7 cut(s) 178, 212, 256, 641, 1105, 1155, 1385
Hin6I GCGC 3 cut(s) 442, 1002, 1107
HinP1I GCGC 3 cut(s) 442, 1002, 1107
HincII GTYRAC 2 cut(s) 154, 486
HindII GTYRAC 2 cut(s) 154, 486
HindIII AAGCTT 2 cut(s) 992, 1036
HinfI GANTC 5 cut(s) 41, 282, 327, 487, 791
HpaI GTTAAC 1 cut(s) 154
HpaII CCGG 2 cut(s) 300, 1369
HphI GGTGA 2 cut(s) 205, 1159
Hpy166II GTNNAC 5 cut(s) 154, 486, 962, 1201, 1489
Hpy188I TCNGA 5 cut(s) 261, 326, 419, 550, 765
Hpy8I GTNNAC 5 cut(s) 154, 486, 962, 1201, 1489
Hpy99I CGWCG 2 cut(s) 1002, 1097
HpyAV CCTTC 1 cut(s) 1294
HpyCH4III ACNGT 7 cut(s) 236, 693, 959, 1205, 1425, 1474, 1486
HpyCH4V TGCA 6 cut(s) 6, 318, 892, 938, 962, 1480
HpyF10VI GCNNNNNNNGC 5 cut(s) 305, 439, 450, 935, 1448
HpyF3I CTNAG 7 cut(s) 100, 244, 287, 416, 549, 563, 990
Hsp92II CATG 7 cut(s) 178, 212, 256, 641, 1105, 1155, 1385
HspAI GCGC 3 cut(s) 442, 1002, 1107
KpnI GGTACC 1 cut(s) 88
KroI GCCGGC 1 cut(s) 299
KroNI GCCGGC 1 cut(s) 301
KspAI GTTAAC 1 cut(s) 154
KspI CCGCGG 1 cut(s) 403
Kzo9I GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
LmnI GCTCC 4 cut(s) 406, 430, 876, 1064
Lsp1109I GCAGC 3 cut(s) 283, 1435, 1464
LweI GCATC 3 cut(s) 15, 327, 1065
MabI ACCWGGT 1 cut(s) 87
MaeI CTAG 3 cut(s) 528, 581, 1395
MaeIII GTNAC 5 cut(s) 67, 211, 542, 1205, 1229
MalI GATC 9 cut(s) 14, 240, 266, 425, 663, 762, 783, 1070, 1166
MboI GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
MboII GAAGA 7 cut(s) 209, 274, 313, 704, 791, 820, 963
MflI RGATCY 1 cut(s) 12
MhlI GDGCHC 6 cut(s) 411, 435, 455, 477, 753, 964
MluCI AATT 7 cut(s) 824, 1028, 1052, 1249, 1272, 1340, 1455
MlyI GAGTC 4 cut(s) 276, 336, 481, 785
Mph1103I ATGCAT 1 cut(s) 894
MroNI GCCGGC 1 cut(s) 299
MroXI GAANNNNTTC 1 cut(s) 1343
MseI TTAA 6 cut(s) 153, 672, 1023, 1287, 1454, 1499
MslI CAYNNNNRTG 4 cut(s) 22, 207, 674, 756
MspA1I CMGCKG 2 cut(s) 402, 929
MspI CCGG 2 cut(s) 300, 1369
MspR9I CCNGG 4 cut(s) 89, 223, 449, 535
MvaI CCWGG 4 cut(s) 89, 223, 449, 535
MvnI CGCG 2 cut(s) 402, 1002
MwoI GCNNNNNNNGC 5 cut(s) 305, 439, 450, 935, 1448
NaeI GCCGGC 1 cut(s) 301
NdeI CATATG 1 cut(s) 840
NdeII GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
NgoMIV GCCGGC 1 cut(s) 299
NheI GCTAGC 1 cut(s) 1394
NlaIII CATG 7 cut(s) 178, 212, 256, 641, 1105, 1155, 1385
NlaIV GGNNCC 4 cut(s) 14, 86, 391, 408
NmuCI GTSAC 3 cut(s) 67, 211, 1229
NsiI ATGCAT 1 cut(s) 894
NspI RCATGY 2 cut(s) 641, 1385
NspV TTCGAA 2 cut(s) 625, 1032
OliI CACNNNNGTG 1 cut(s) 22
PaeR7I CTCGAG 1 cut(s) 344
PceI AGGCCT 1 cut(s) 850
PcsI WCGNNNNNNNCGW 2 cut(s) 652, 1194
PdiI GCCGGC 1 cut(s) 301
PdmI GAANNNNTTC 1 cut(s) 1343
PfeI GAWTC 1 cut(s) 41
PkrI GCNGC 4 cut(s) 60, 298, 1450, 1479
Ple19I CGATCG 1 cut(s) 1071
PleI GAGTC 4 cut(s) 276, 335, 481, 785
PpsI GAGTC 4 cut(s) 276, 335, 481, 785
PshBI ATTAAT 1 cut(s) 672
Psp6I CCWGG 4 cut(s) 87, 221, 447, 533
PspGI CCWGG 4 cut(s) 87, 221, 447, 533
PspN4I GGNNCC 4 cut(s) 14, 86, 391, 408
PspPI GGNCC 3 cut(s) 27, 91, 389
PsuI RGATCY 1 cut(s) 12
PvuI CGATCG 1 cut(s) 1071
RsaI GTAC 2 cut(s) 86, 1406
RsaNI GTAC 2 cut(s) 85, 1405
RseI CAYNNNNRTG 4 cut(s) 22, 207, 674, 756
SacII CCGCGG 1 cut(s) 403
SaqAI TTAA 6 cut(s) 153, 672, 1023, 1287, 1454, 1499
SatI GCNGC 4 cut(s) 59, 297, 1449, 1478
Sau3AI GATC 9 cut(s) 12, 238, 264, 423, 661, 760, 781, 1068, 1164
Sau96I GGNCC 3 cut(s) 27, 91, 389
SchI GAGTC 4 cut(s) 276, 336, 481, 785
ScrFI CCNGG 4 cut(s) 89, 223, 449, 535
SduI GDGCHC 6 cut(s) 411, 435, 455, 477, 753, 964
SexAI ACCWGGT 1 cut(s) 87
SfaNI GCATC 3 cut(s) 15, 327, 1065
SfcI CTRYAG 1 cut(s) 129
Sfr274I CTCGAG 1 cut(s) 344
Sfr303I CCGCGG 1 cut(s) 403
SfuI TTCGAA 2 cut(s) 625, 1032
SgrBI CCGCGG 1 cut(s) 403
SinI GGWCC 2 cut(s) 27, 91
SlaI CTCGAG 1 cut(s) 344
SmiMI CAYNNNNRTG 4 cut(s) 22, 207, 674, 756
SmlI CTYRAG 5 cut(s) 79, 147, 344, 719, 746
SmoI CTYRAG 5 cut(s) 79, 147, 344, 719, 746
Sse9I AATT 7 cut(s) 824, 1028, 1052, 1249, 1272, 1340, 1455
SseBI AGGCCT 1 cut(s) 850
SsiI CCGC 6 cut(s) 59, 332, 400, 402, 910, 929
SspMI CTAG 3 cut(s) 528, 581, 1395
StuI AGGCCT 1 cut(s) 850
StyD4I CCNGG 4 cut(s) 87, 221, 447, 533
StyI CCWWGG 2 cut(s) 119, 771
TaaI ACNGT 7 cut(s) 236, 693, 959, 1205, 1425, 1474, 1486
TasI AATT 7 cut(s) 824, 1028, 1052, 1249, 1272, 1340, 1455
TatI WGTACW 1 cut(s) 1404
TauI GCSGC 1 cut(s) 61
TfiI GAWTC 1 cut(s) 41
Tru1I TTAA 6 cut(s) 153, 672, 1023, 1287, 1454, 1499
Tru9I TTAA 6 cut(s) 153, 672, 1023, 1287, 1454, 1499
TscAI CASTG 5 cut(s) 241, 574, 964, 1145, 1479
TseFI GTSAC 3 cut(s) 67, 211, 1229
TseI GCWGC 3 cut(s) 296, 1448, 1477
Tsp45I GTSAC 3 cut(s) 67, 211, 1229
TspDTI ATGAA 5 cut(s) 163, 245, 1090, 1273, 1346
TspRI CASTG 5 cut(s) 241, 574, 964, 1145, 1479
VneI GTGCAC 1 cut(s) 960
VpaK11BI GGWCC 2 cut(s) 27, 91
VspI ATTAAT 1 cut(s) 672
XapI RAATTY 3 cut(s) 824, 1028, 1052
XceI RCATGY 2 cut(s) 641, 1385
XcmI CCANNNNNNNNNTGG 1 cut(s) 517
XhoI CTCGAG 1 cut(s) 344
XmiI GTMKAC 1 cut(s) 1488
XmnI GAANNNNTTC 1 cut(s) 1343
XspI CTAG 3 cut(s) 528, 581, 1395
Zsp2I ATGCAT 1 cut(s) 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.