RLG00000035932

cysteine-type peptidase activity

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
73634344 .. 73635476
1133 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035932

Sequence Viewer

Length: 942 bp
ATGGATTTCAAAAGAAACCATGTGATCAGTGCCATATTCATCATCTTAGGGAATTTGGCTTCTCAAGCCACATCCGATGCATTGTACGAATCTTCCATTGCCGAAAAACATGAGGAATGGATGGCAAAGCATGGACGCGTTTACCCCAATGCGGCAGAGAAGGAAAGGCGTTTCGGCATCTTCAGGAAGAATGTCGAATACGTGGAGAAGTTCAACAATGAAGGGAATAAGACTTACAATTCAACGTCATCCAATTTTAGCTACCAAAGCTTGGCTGCTACTGATATTCCAACTACCGTGGACTGGAGGGAACAACAAGCTGTCACCCCCATAAAGTATCAAAGTCAATGCGGTGCTTGCTGGGCATTTGCAGTAGCAGCAACTGTGGAAGGGCTAACCAAAATCAAAACCGGCCAATTGATCTCACTCTCCGAGCAGCAACTTGTGGACTGCAATCATCAGAACACTGGGTGCAAGGGTGGTTACTTAGAATACGCCTATTACTACGTAGTACAAAACGGAGGACTCGCTCGTGAAGAAACTTACCCGTACCAGGCAACAGACATGGGAACATGCGATACTAACAAGGAAAGTGAGCATGCGGCACAGATCACTAGCTATGAACGCGTCCCTTCCAGAAGTGAAAACGATCTACAGAAGGCTGTGGCCATGCAACCAGTATCGGTTACCATTTCTGCTTATGGACAAGATTTTCAGATGTACGGCAGTGGGGTGTTCTCCGGCTATTGTGGGACGGAGCTCGACCACGCCGTCACGGTCATTGGCTACGGGACGATTGAAGATGGAACCCCCTATTGGTTAATAAAGAACTCATGGGGGCAGATTTGGGGTGAAAGTGGGTATATGAGAATTCTTAGAAACATTAATGCCCCAGAGGGTATGTGCGGCCTTGCTATCAATCCCCTCTATCCGACTGCATAA
Functional Annotation

Protein Analysis

314

Amino Acids

34.87

Weight (kDa)

5.24

Isoelectric Point (pI)

36.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 37 - 87 6.9e-12 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 96 - 311 5.3e-79 Papain family cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000341)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G27420 AT3G49340
fragaria_vesca FvH4_3g07960 FvH4_3g07970 FvH4_3g08030 FvH4_3g14350 FvH4_3g14380 FvH4_3g20730
malus_domestica MD04G1190600.v1.1 MD05G1287600.v1.1 MD05G1287900.v1.1 MD05G1288200.v1.1 MD05G1288400.v1.1 MD05G1302800.v1.1 MD10G1281600.v1.1 MD10G1281700.v1.1 MD10G1281800.v1.1 MD10G1282100.v1.1 MD10G1282200.v1.1 MD16G1031600.v1.1 MD16G1032300.v1.1
prunus_persica Prupe.4G059600_v2.0.a1
pyrus_communis pycom10g23500 pycom10g23510 pycom10g23520
rosa_chinensis RchiOBHm_Chr5g0010261 RchiOBHm_Chr5g0010361 RchiOBHm_Chr5g0010391 RchiOBHm_Chr5g0010401 RchiOBHm_Chr5g0023511 RchiOBHm_Chr5g0023601 RchiOBHm_Chr5g0023621 RchiOBHm_Chr5g0023691 RchiOBHm_Chr5g0033681 RchiOBHm_Chr5g0034901 RchiOBHm_Chr5g0034951 RchiOBHm_Chr5g0067391
rosa_laevigata RLG00000016148 RLG00000031732 RLG00000031742 RLG00000031743 RLG00000031748 RLG00000031751 RLG00000031752 RLG00000031754 RLG00000032725 RLG00000032730 RLG00000033542 RLG00000033584 RLG00000033587 RLG00000035932
rosa_multiflora Rmu_co7996926.1_g000001 Rmu_co8207458.1_g000001 Rmu_co8273509.1_g000001 Rmu_sc0000062.1_g000016 Rmu_sc0000062.1_g000017 Rmu_sc0001580.1_g000004 Rmu_sc0001580.1_g000023 Rmu_sc0007816.1_g000005 Rmu_sc0007816.1_g000009 Rmu_sc0008877.1_g000003 Rmu_sc0009313.1_g000011 Rmu_sc0009313.1_g000015 Rmu_sc0009313.1_g000021
rosa_roxburghii Rroxscaffold_1G00012970 Rroxscaffold_1G00045430 Rroxscaffold_1G00055550 Rroxscaffold_1G00065850 Rroxscaffold_1G00065880 Rroxscaffold_1G00065890 Rroxscaffold_1G00065900 Rroxscaffold_1G00065990
rosa_rugosa Rorug04G0450100 Rorug04G0450100 Rorug04G0450200 Rorug04G0451200 Rorug05G0145700 Rorug05G0149000 Rorug05G0385000
rosa_samantha Rh5AG080800 Rh5AG081500 Rh5AG081700 Rh5AG081900 Rh5AG167500 Rh5AG168500 Rh5AG232900 Rh5AG241400 Rh5AG242000 Rh5AG444500 Rh5BG075300 Rh5BG076500 Rh5BG076600 Rh5BG077000 Rh5BG165800 Rh5BG237800 Rh5BG241500 Rh5BG241600 Rh5BG461200 Rh5BG461300
rosa_wichuraiana Rw0G000780 Rw0G021930 Rw5G007480 Rw5G007560 Rw5G007570 Rw5G015200 Rw5G015260 Rw5G022090 Rw5G022100 Rw5G041490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 770
AccB7I CCANNNNNTGG 1 cut(s) 271
AccII CGCG 2 cut(s) 138, 627
AciI CCGC 4 cut(s) 152, 351, 602, 906
AcoI YGGCCR 2 cut(s) 412, 666
AcsI RAATTY 2 cut(s) 52, 870
AcuI CTGAAG 1 cut(s) 166
AdeI CACNNNGTG 1 cut(s) 471
AfaI GTAC 4 cut(s) 86, 513, 551, 722
AfiI CCNNNNNNNGG 5 cut(s) 151, 271, 303, 553, 816
AflIII ACRYGT 2 cut(s) 136, 625
AgsI TTSAA 4 cut(s) 10, 214, 243, 800
AjnI CCWGG 1 cut(s) 552
AjuI GAANNNNNNNTTGG 2 cut(s) 799, 831
AluBI AGCT 5 cut(s) 261, 270, 320, 618, 760
AluI AGCT 5 cut(s) 261, 270, 320, 618, 760
Alw21I GWGCWC 1 cut(s) 762
AlwNI CAGNNNCTG 1 cut(s) 383
AoxI GGCC 3 cut(s) 412, 666, 907
ApeKI GCWGC 3 cut(s) 275, 377, 436
ApoI RAATTY 2 cut(s) 52, 870
AseI ATTAAT 1 cut(s) 885
AsuHPI GGTGA 2 cut(s) 316, 863
BalI TGGCCA 1 cut(s) 668
BanII GRGCYC 1 cut(s) 762
BauI CACGAG 1 cut(s) 531
Bbv12I GWGCWC 1 cut(s) 762
BbvI GCAGC 3 cut(s) 262, 389, 448
BccI CCATC 2 cut(s) 115, 797
BceAI ACGGC 2 cut(s) 739, 755
BciT130I CCWGG 1 cut(s) 554
BclI TGATCA 1 cut(s) 24
BfaI CTAG 1 cut(s) 615
BfmI CTRYAG 1 cut(s) 653
BisI GCNGC 6 cut(s) 153, 276, 378, 437, 603, 907
BlsI GCNGC 6 cut(s) 154, 277, 379, 438, 604, 908
Bme1390I CCNGG 1 cut(s) 554
BmiI GGNNCC 1 cut(s) 808
BmrFI CCNGG 1 cut(s) 554
BmrI ACTGGG 1 cut(s) 477
BmsI GCATC 2 cut(s) 67, 186
BmuI ACTGGG 1 cut(s) 477
BpmI CTGGAG 1 cut(s) 325
BpuEI CTTGAG 1 cut(s) 48
BsaAI YACGTR 2 cut(s) 202, 508
BsaJI CCNNGG 1 cut(s) 297
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 271, 303, 553, 816
Bse118I RCCGGY 1 cut(s) 410
Bse1I ACTGG 3 cut(s) 308, 472, 677
Bse3DI GCAATG 1 cut(s) 96
BseBI CCWGG 1 cut(s) 554
BseDI CCNNGG 1 cut(s) 297
BseGI GGATG 3 cut(s) 71, 126, 248
BseLI CCNNNNNNNGG 5 cut(s) 151, 271, 303, 553, 816
BseMI GCAATG 1 cut(s) 96
BseNI ACTGG 3 cut(s) 308, 472, 677
BseXI GCAGC 3 cut(s) 262, 389, 448
BseYI CCCAGC 1 cut(s) 360
Bsh1236I CGCG 2 cut(s) 138, 627
BshFI GGCC 3 cut(s) 414, 668, 909
BsiHKAI GWGCWC 1 cut(s) 762
BsiSI CCGG 2 cut(s) 411, 741
BslFI GGGAC 3 cut(s) 614, 766, 805
BslI CCNNNNNNNGG 5 cut(s) 151, 271, 303, 553, 816
BsmFI GGGAC 3 cut(s) 614, 766, 805
BsnI GGCC 3 cut(s) 414, 668, 909
Bsp1286I GDGCHC 1 cut(s) 762
Bsp143I GATC 4 cut(s) 24, 420, 609, 649
BspACI CCGC 4 cut(s) 152, 351, 602, 906
BspANI GGCC 3 cut(s) 414, 668, 909
BspFNI CGCG 2 cut(s) 138, 627
BspLI GGNNCC 1 cut(s) 808
BsrDI GCAATG 1 cut(s) 96
BsrFI RCCGGY 1 cut(s) 410
BsrI ACTGG 3 cut(s) 308, 472, 677
BssAI RCCGGY 1 cut(s) 410
BssECI CCNNGG 1 cut(s) 297
BssMI GATC 4 cut(s) 24, 420, 609, 649
BssSI CACGAG 1 cut(s) 531
Bst2BI CACGAG 1 cut(s) 531
Bst2UI CCWGG 1 cut(s) 554
Bst4CI ACNGT 3 cut(s) 298, 385, 778
BstBAI YACGTR 2 cut(s) 202, 508
BstC8I GCNNGC 2 cut(s) 358, 600
BstDEI CTNAG 3 cut(s) 46, 487, 875
BstDSI CCRYGG 1 cut(s) 297
BstEII GGTNACC 1 cut(s) 685
BstF5I GGATG 3 cut(s) 71, 126, 248
BstFNI CGCG 2 cut(s) 138, 627
BstKTI GATC 4 cut(s) 27, 423, 612, 652
BstMBI GATC 4 cut(s) 24, 420, 609, 649
BstMWI GCNNNNNNNGC 6 cut(s) 65, 267, 357, 362, 377, 624
BstNI CCWGG 1 cut(s) 554
BstNSI RCATGY 2 cut(s) 576, 602
BstPI GGTNACC 1 cut(s) 685
BstSCI CCNGG 1 cut(s) 552
BstSFI CTRYAG 1 cut(s) 653
BstSNI TACGTA 1 cut(s) 508
BstUI CGCG 2 cut(s) 138, 627
BstV1I GCAGC 3 cut(s) 262, 389, 448
BsuRI GGCC 3 cut(s) 414, 668, 909
BtgI CCRYGG 1 cut(s) 297
BtsCI GGATG 3 cut(s) 71, 126, 248
BtsI GCAGTG 1 cut(s) 733
BtsIMutI CAGTG 3 cut(s) 34, 465, 733
Cac8I GCNNGC 2 cut(s) 358, 600
CaiI CAGNNNCTG 1 cut(s) 383
Cfr10I RCCGGY 1 cut(s) 410
CseI GACGC 2 cut(s) 144, 616
Csp6I GTAC 4 cut(s) 85, 512, 550, 721
CspCI CAANNNNNGTGG 2 cut(s) 279, 314
CviAII CATG 8 cut(s) 20, 110, 131, 565, 573, 599, 670, 834
CviQI GTAC 4 cut(s) 85, 512, 550, 721
DdeI CTNAG 3 cut(s) 46, 487, 875
DpnI GATC 4 cut(s) 26, 422, 611, 651
DpnII GATC 4 cut(s) 24, 420, 609, 649
DraIII CACNNNGTG 1 cut(s) 471
DrdI GACNNNNNNGTC 1 cut(s) 770
DseDI GACNNNNNNGTC 1 cut(s) 770
EaeI YGGCCR 2 cut(s) 412, 666
Ecl136II GAGCTC 1 cut(s) 760
Eco105I TACGTA 1 cut(s) 508
Eco24I GRGCYC 1 cut(s) 762
Eco53kI GAGCTC 1 cut(s) 760
Eco57I CTGAAG 1 cut(s) 166
Eco91I GGTNACC 1 cut(s) 685
EcoICRI GAGCTC 1 cut(s) 760
EcoO65I GGTNACC 1 cut(s) 685
EcoRI GAATTC 1 cut(s) 870
EcoRII CCWGG 1 cut(s) 552
EcoT22I ATGCAT 1 cut(s) 82
EcoT38I GRGCYC 1 cut(s) 762
FaeI CATG 8 cut(s) 23, 113, 134, 568, 576, 602, 673, 837
FaqI GGGAC 3 cut(s) 614, 766, 805
FatI CATG 8 cut(s) 19, 109, 130, 564, 572, 598, 669, 833
FbaI TGATCA 1 cut(s) 24
Fnu4HI GCNGC 6 cut(s) 153, 276, 378, 437, 603, 907
FokI GGATG 3 cut(s) 58, 133, 235
FriOI GRGCYC 1 cut(s) 762
Fsp4HI GCNGC 6 cut(s) 153, 276, 378, 437, 603, 907
FspBI CTAG 1 cut(s) 615
GluI GCNGC 6 cut(s) 153, 276, 378, 437, 603, 907
GsaI CCCAGC 1 cut(s) 364
GsuI CTGGAG 1 cut(s) 325
HaeIII GGCC 3 cut(s) 414, 668, 909
HapII CCGG 2 cut(s) 411, 741
HgaI GACGC 2 cut(s) 144, 616
Hin1II CATG 8 cut(s) 23, 113, 134, 568, 576, 602, 673, 837
HindIII AAGCTT 1 cut(s) 268
HinfI GANTC 2 cut(s) 89, 525
HpaII CCGG 2 cut(s) 411, 741
HphI GGTGA 2 cut(s) 316, 863
Hpy166II GTNNAC 3 cut(s) 142, 301, 448
Hpy188I TCNGA 5 cut(s) 76, 433, 462, 717, 933
Hpy188III TCNNGA 3 cut(s) 184, 533, 636
Hpy8I GTNNAC 3 cut(s) 142, 301, 448
HpyAV CCTTC 5 cut(s) 154, 215, 383, 642, 652
HpyCH4III ACNGT 3 cut(s) 298, 385, 778
HpyCH4IV ACGT 3 cut(s) 201, 245, 507
HpyCH4V TGCA 6 cut(s) 80, 371, 453, 474, 673, 938
HpyF10VI GCNNNNNNNGC 6 cut(s) 65, 267, 357, 362, 377, 624
HpyF3I CTNAG 3 cut(s) 46, 487, 875
HpySE526I ACGT 3 cut(s) 201, 245, 507
Hsp92II CATG 8 cut(s) 23, 113, 134, 568, 576, 602, 673, 837
Ksp22I TGATCA 1 cut(s) 24
Kzo9I GATC 4 cut(s) 24, 420, 609, 649
LmnI GCTCC 1 cut(s) 757
Lsp1109I GCAGC 3 cut(s) 262, 389, 448
LweI GCATC 2 cut(s) 67, 186
MaeI CTAG 1 cut(s) 615
MaeII ACGT 3 cut(s) 201, 245, 507
MaeIII GTNAC 4 cut(s) 322, 482, 685, 772
MalI GATC 4 cut(s) 26, 422, 611, 651
MboI GATC 4 cut(s) 24, 420, 609, 649
MboII GAAGA 5 cut(s) 84, 172, 199, 548, 812
MfeI CAATTG 1 cut(s) 416
MhlI GDGCHC 1 cut(s) 762
MlsI TGGCCA 1 cut(s) 668
MluCI AATT 5 cut(s) 52, 238, 253, 416, 870
MluI ACGCGT 2 cut(s) 136, 625
MluNI TGGCCA 1 cut(s) 668
MlyI GAGTC 1 cut(s) 519
MmeI TCCRAC 1 cut(s) 314
MnlI CCTC 5 cut(s) 106, 300, 515, 889, 935
Mox20I TGGCCA 1 cut(s) 668
Mph1103I ATGCAT 1 cut(s) 82
MscI TGGCCA 1 cut(s) 668
MseI TTAA 2 cut(s) 821, 885
Msp20I TGGCCA 1 cut(s) 668
MspI CCGG 2 cut(s) 411, 741
MspR9I CCNGG 1 cut(s) 554
MunI CAATTG 1 cut(s) 416
MvaI CCWGG 1 cut(s) 554
MvnI CGCG 2 cut(s) 138, 627
MwoI GCNNNNNNNGC 6 cut(s) 65, 267, 357, 362, 377, 624
NdeII GATC 4 cut(s) 24, 420, 609, 649
NlaIII CATG 8 cut(s) 23, 113, 134, 568, 576, 602, 673, 837
NlaIV GGNNCC 1 cut(s) 808
NmuCI GTSAC 2 cut(s) 322, 772
NsiI ATGCAT 1 cut(s) 82
NspI RCATGY 2 cut(s) 576, 602
PaeI GCATGC 1 cut(s) 602
PcsI WCGNNNNNNNCGW 1 cut(s) 768
PfeI GAWTC 1 cut(s) 89
PflMI CCANNNNNTGG 1 cut(s) 271
PkrI GCNGC 6 cut(s) 154, 277, 379, 438, 604, 908
PleI GAGTC 1 cut(s) 519
PpsI GAGTC 1 cut(s) 519
Ppu21I YACGTR 2 cut(s) 202, 508
PshBI ATTAAT 1 cut(s) 885
Psp124BI GAGCTC 1 cut(s) 762
Psp6I CCWGG 1 cut(s) 552
PspEI GGTNACC 1 cut(s) 685
PspFI CCCAGC 1 cut(s) 360
PspGI CCWGG 1 cut(s) 552
PspN4I GGNNCC 1 cut(s) 808
PsrI GAACNNNNNNTAC 2 cut(s) 562, 594
PstNI CAGNNNCTG 1 cut(s) 383
RsaI GTAC 4 cut(s) 86, 513, 551, 722
RsaNI GTAC 4 cut(s) 85, 512, 550, 721
SacI GAGCTC 1 cut(s) 762
SaqAI TTAA 2 cut(s) 821, 885
SatI GCNGC 6 cut(s) 153, 276, 378, 437, 603, 907
Sau3AI GATC 4 cut(s) 24, 420, 609, 649
SchI GAGTC 1 cut(s) 519
ScrFI CCNGG 1 cut(s) 554
SduI GDGCHC 1 cut(s) 762
SetI ASST 8 cut(s) 204, 248, 263, 272, 322, 510, 620, 762
SfaNI GCATC 2 cut(s) 67, 186
SfcI CTRYAG 1 cut(s) 653
SmlI CTYRAG 1 cut(s) 63
SmoI CTYRAG 1 cut(s) 63
SnaBI TACGTA 1 cut(s) 508
SphI GCATGC 1 cut(s) 602
Sse9I AATT 5 cut(s) 52, 238, 253, 416, 870
SsiI CCGC 4 cut(s) 152, 351, 602, 906
SspMI CTAG 1 cut(s) 615
SstI GAGCTC 1 cut(s) 762
StyD4I CCNGG 1 cut(s) 552
TaaI ACNGT 3 cut(s) 298, 385, 778
TaiI ACGT 3 cut(s) 204, 248, 510
TaqI TCGA 2 cut(s) 195, 762
TasI AATT 5 cut(s) 52, 238, 253, 416, 870
TatI WGTACW 1 cut(s) 511
TauI GCSGC 3 cut(s) 155, 605, 909
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 2 cut(s) 821, 885
Tru9I TTAA 2 cut(s) 821, 885
TscAI CASTG 3 cut(s) 34, 472, 733
TseFI GTSAC 2 cut(s) 322, 772
TseI GCWGC 3 cut(s) 275, 377, 436
Tsp45I GTSAC 2 cut(s) 322, 772
TspDTI ATGAA 3 cut(s) 28, 234, 636
TspGWI ACGGA 2 cut(s) 534, 770
TspRI CASTG 3 cut(s) 34, 472, 733
Van91I CCANNNNNTGG 1 cut(s) 271
VspI ATTAAT 1 cut(s) 885
XapI RAATTY 2 cut(s) 52, 870
XceI RCATGY 2 cut(s) 576, 602
XspI CTAG 1 cut(s) 615
Zsp2I ATGCAT 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.