Rmu_sc0008877.1_g000003

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008877.1
OG0000341
Physical Location & Seq
Forward (+)
18405 .. 24624
6220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008877.1_g000003.1.cds

Sequence Viewer

Length: 2220 bp
atggatttcaaaagaaaccatgtgatcagtgccatattcatcatcttagggaatttggcttctcaagccacatccgatgcattgtacgaatcttccattgccgaaaaacatgagcaatggatggcaaagcatggacgtgtttaccccaatgcggcagagaaggaaaggcgtttcggcatcttcaggaagaatgtcgaatacgtggagaagtttaacaatgaagggaataagacttacaagttgaacctcaacagctttgcggatatgaccaacgaagaattccggagacatcataccggatacagaaccccccctggcttaagttcaacgtcatccaattttagctaccaaagcttggctgctactgatattccaactaccgtggactggagggaacaacaagctgtcacccccataaagtatcaaagtcaatgcggtgcttgctgggcatttgcagtagcagcaactgtggaagggctaaccaaaatcaaaacaggccaattgatctcactctccgagcagcaacttgtggactgcaatcatcagaacactgggtgcaagggtggttacttagactacgcctattcctacgtagtacaaaacggaggactcgctcgagaagaaacttacccgtaccaggcaacagacatgggaacatgcgatactaacaaggaaagtgagcatgcagcacggatcactggctatgaacgcgtcccttccagaagtgaaaacgatctacagaaggctgtggccatgcaaccagtatcggttaccatttctgcttatggacaagattttcagatgtacggcagtggggtgttctccggctattgtgggacggagctcgaccacgccgtcacggtcattggctacgggacgattgaagatggaaccccctattggttaataaagaactcatgggggcagagttggggtgaaagtgggtatatgagaattcttagaaacattaatgccccagaggaagaccatttgagaaacccatttctctgttcattagtggaaggattccaagccaagtttatattacttgcaatggctgatgaacctacaagaaagattagcctgaaggccttagtaaacagggggaacaaaagagttatctttatggagtctggccatgaatttgttgatgttctcttaagctacttgacaatccccataggaacaattatcaagcttggccgtaacaacagtaatttggcaccactgggaataggttgcatgaacaatttgtatgcaagtgttgtgaatatggatgtgcagcatttctggactgaagcttgttgggacatgttgctatgtcctcgaaatggagctggatcgactttaaagagcctcaaactcaaaattgatgactgtgatcctacacagtactttaagtgctcgaatgtgtcttgccgcacatctccggctaggctaagctattacagaagtgttcgctgttgtcattgtggaaatcaaatggactcaaagagcaaccttttagttggctgtcttgatggggtgtttgtaaaaggactagccagacttataattagtgatgatttacaagtcatgcctgcagtaacatcagtgagctcttctttgttgatgaagcctggggtcatggattcaaatactattgaggaggtgactttggacattggagttgatgagggatgcattgatcacctgtacaaaagtgtccgggatcttgatcagcagctcttgaagtctagatactctaaggaagtactagttaatcccaagcttcccccaggattttgctaccagaaccaacctttaggtattggaacggccacatttcatattgcggcagctgaaatcgtggacccaaaatccccttctggtgaagacagtgatcaaggattcttaaaaggaccagcactatttgtggtgactgacaatcttattgtaagtccggtatcttcagtcttgggcccatctattctggacaaaatgaatgtgcctatcactgatattgaagtgcaaacagtgcttgtgggcaaggaagaggttgtggtgagagtgcacacatgtgatctcaagtcgcccctgtgggactcctctaccattctgcgcttatggatggcttatgctgagaactcggcctcaacgaccttgtactacttgaatgcacttcttttgcatttgtactataggcgtctagatccagctctgccaagaaccacaggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04145 ko04210 ko04612 ko04621 ko04924 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map04621 map04924 map05205 map05323 map05418
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

739

Amino Acids

82.08

Weight (kDa)

5.94

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000341)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G27420 AT3G49340
fragaria_vesca FvH4_3g07960 FvH4_3g07970 FvH4_3g08030 FvH4_3g14350 FvH4_3g14380 FvH4_3g20730
malus_domestica MD04G1190600.v1.1 MD05G1287600.v1.1 MD05G1287900.v1.1 MD05G1288200.v1.1 MD05G1288400.v1.1 MD05G1302800.v1.1 MD10G1281600.v1.1 MD10G1281700.v1.1 MD10G1281800.v1.1 MD10G1282100.v1.1 MD10G1282200.v1.1 MD16G1031600.v1.1 MD16G1032300.v1.1
prunus_persica Prupe.4G059600_v2.0.a1
pyrus_communis pycom10g23500 pycom10g23510 pycom10g23520
rosa_chinensis RchiOBHm_Chr5g0010261 RchiOBHm_Chr5g0010361 RchiOBHm_Chr5g0010391 RchiOBHm_Chr5g0010401 RchiOBHm_Chr5g0023511 RchiOBHm_Chr5g0023601 RchiOBHm_Chr5g0023621 RchiOBHm_Chr5g0023691 RchiOBHm_Chr5g0033681 RchiOBHm_Chr5g0034901 RchiOBHm_Chr5g0034951 RchiOBHm_Chr5g0067391
rosa_laevigata RLG00000016148 RLG00000031732 RLG00000031742 RLG00000031743 RLG00000031748 RLG00000031751 RLG00000031752 RLG00000031754 RLG00000032725 RLG00000032730 RLG00000033542 RLG00000033584 RLG00000033587 RLG00000035932
rosa_multiflora Rmu_co7996926.1_g000001 Rmu_co8207458.1_g000001 Rmu_co8273509.1_g000001 Rmu_sc0000062.1_g000016 Rmu_sc0000062.1_g000017 Rmu_sc0001580.1_g000004 Rmu_sc0001580.1_g000023 Rmu_sc0007816.1_g000005 Rmu_sc0007816.1_g000009 Rmu_sc0008877.1_g000003 Rmu_sc0009313.1_g000011 Rmu_sc0009313.1_g000015 Rmu_sc0009313.1_g000021
rosa_roxburghii Rroxscaffold_1G00012970 Rroxscaffold_1G00045430 Rroxscaffold_1G00055550 Rroxscaffold_1G00065850 Rroxscaffold_1G00065880 Rroxscaffold_1G00065890 Rroxscaffold_1G00065900 Rroxscaffold_1G00065990
rosa_rugosa Rorug04G0450100 Rorug04G0450100 Rorug04G0450200 Rorug04G0451200 Rorug05G0145700 Rorug05G0149000 Rorug05G0385000
rosa_samantha Rh5AG080800 Rh5AG081500 Rh5AG081700 Rh5AG081900 Rh5AG167500 Rh5AG168500 Rh5AG232900 Rh5AG241400 Rh5AG242000 Rh5AG444500 Rh5BG075300 Rh5BG076500 Rh5BG076600 Rh5BG077000 Rh5BG165800 Rh5BG237800 Rh5BG241500 Rh5BG241600 Rh5BG461200 Rh5BG461300
rosa_wichuraiana Rw0G000780 Rw0G021930 Rw5G007480 Rw5G007560 Rw5G007570 Rw5G015200 Rw5G015260 Rw5G022090 Rw5G022100 Rw5G041490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1553
AasI GACNNNNNNGTC 1 cut(s) 854
AccB1I GGYRCC 1 cut(s) 1222
AccB7I CCANNNNNTGG 1 cut(s) 355
AccII CGCG 1 cut(s) 711
AccIII TCCGGA 1 cut(s) 282
AciI CCGC 5 cut(s) 152, 260, 435, 1420, 1835
AclWI GGATC 5 cut(s) 701, 1348, 1376, 1719, 2186
AcoI YGGCCR 4 cut(s) 750, 1135, 1201, 1818
AcsI RAATTY 4 cut(s) 52, 278, 954, 1142
AcuI CTGAAG 4 cut(s) 166, 1106, 1317, 1935
AcyI GRCGYC 1 cut(s) 2185
AdeI CACNNNGTG 1 cut(s) 555
AfaI GTAC 9 cut(s) 86, 597, 635, 806, 1394, 1697, 1755, 2147, 2177
AfiI CCNNNNNNNGG 6 cut(s) 151, 355, 387, 637, 900, 1331
AflII CTTAAG 2 cut(s) 319, 1159
AflIII ACRYGT 4 cut(s) 136, 709, 1311, 2057
AgsI TTSAA 8 cut(s) 10, 244, 327, 884, 1635, 1732, 2006, 2155
AhlI ACTAGT 1 cut(s) 1756
AjiI CACGTC 1 cut(s) 137
AjnI CCWGG 4 cut(s) 313, 636, 1618, 1777
AjuI GAANNNNNNNTTGG 6 cut(s) 263, 295, 883, 915, 1849, 1881
AleI CACNNNNGTG 1 cut(s) 2058
Alw21I GWGCWC 4 cut(s) 846, 1406, 1601, 2055
Alw26I GTCTC 1 cut(s) 280
Alw44I GTGCAC 1 cut(s) 2051
AlwI GGATC 5 cut(s) 701, 1348, 1376, 1719, 2186
AlwNI CAGNNNCTG 1 cut(s) 467
Ama87I CYCGRG 1 cut(s) 615
Aor13HI TCCGGA 1 cut(s) 282
AoxI GGCC 8 cut(s) 496, 750, 1089, 1135, 1201, 1818, 1960, 2130
ApaI GGGCCC 1 cut(s) 1964
ApaLI GTGCAC 1 cut(s) 2051
ApeKI GCWGC 7 cut(s) 359, 461, 520, 686, 1282, 1723, 1838
ApoI RAATTY 4 cut(s) 52, 278, 954, 1142
AseI ATTAAT 1 cut(s) 969
AspLEI GCGC 1 cut(s) 2103
AspS9I GGNCC 4 cut(s) 1852, 1901, 1960, 1961
AsuC2I CCSGG 1 cut(s) 1709
AsuHPI GGTGA 7 cut(s) 400, 947, 1663, 1682, 1883, 1930, 2056
AvaI CYCGRG 1 cut(s) 615
AvaII GGWCC 2 cut(s) 1852, 1901
BaeGI GKGCMC 2 cut(s) 1964, 2055
BalI TGGCCA 2 cut(s) 752, 1137
BanI GGYRCC 1 cut(s) 1222
BanII GRGCYC 3 cut(s) 846, 1601, 1964
BarI GAAGNNNNNNTAC 2 cut(s) 1724, 1756
BbsI GAAGAC 2 cut(s) 990, 1881
Bbv12I GWGCWC 4 cut(s) 846, 1406, 1601, 2055
BbvI GCAGC 7 cut(s) 346, 473, 532, 698, 1294, 1735, 1850
BccI CCATC 5 cut(s) 115, 881, 1514, 1972, 2104
BceAI ACGGC 4 cut(s) 823, 839, 1188, 1833
BciT130I CCWGG 4 cut(s) 315, 638, 1620, 1779
BciVI GTATCC 1 cut(s) 293
BclI TGATCA 4 cut(s) 24, 1687, 1717, 1882
BcnI CCSGG 1 cut(s) 1709
BcoDI GTCTC 1 cut(s) 280
BcuI ACTAGT 1 cut(s) 1756
BfaI CTAG 5 cut(s) 1434, 1541, 1737, 1757, 2189
BfmI CTRYAG 3 cut(s) 737, 1581, 2179
BfrI CTTAAG 2 cut(s) 319, 1159
BfuI GTATCC 1 cut(s) 293
BlpI GCTNAGC 1 cut(s) 1439
BmcAI AGTACT 2 cut(s) 1394, 1755
Bme1390I CCNGG 5 cut(s) 315, 638, 1620, 1709, 1779
Bme18I GGWCC 2 cut(s) 1852, 1901
BmeT110I CYCGRG 1 cut(s) 615
BmgBI CACGTC 1 cut(s) 137
BmgT120I GGNCC 4 cut(s) 1852, 1901, 1960, 1961
BmiI GGNNCC 4 cut(s) 892, 1224, 1854, 1962
BmrFI CCNGG 5 cut(s) 315, 638, 1620, 1709, 1779
BmrI ACTGGG 2 cut(s) 561, 1238
BmsI GCATC 3 cut(s) 67, 186, 1670
BmuI ACTGGG 2 cut(s) 561, 1238
BpiI GAAGAC 2 cut(s) 990, 1881
BpmI CTGGAG 1 cut(s) 409
Bpu1102I GCTNAGC 1 cut(s) 1439
BpuEI CTTGAG 2 cut(s) 48, 2051
BpuMI CCSGG 1 cut(s) 1709
BsaAI YACGTR 2 cut(s) 202, 592
BsaBI GATNNNNATC 1 cut(s) 1716
BsaHI GRCGYC 1 cut(s) 2185
BsaJI CCNNGG 4 cut(s) 313, 381, 1619, 1777
BsaWI WCCGGW 3 cut(s) 282, 296, 1942
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 355, 387, 637, 900, 1331
Bse1I ACTGG 5 cut(s) 392, 556, 703, 761, 1233
Bse3DI GCAATG 3 cut(s) 96, 122, 1059
Bse8I GATNNNNATC 1 cut(s) 1716
BseAI TCCGGA 1 cut(s) 282
BseBI CCWGG 4 cut(s) 315, 638, 1620, 1779
BseDI CCNNGG 4 cut(s) 313, 381, 1619, 1777
BseGI GGATG 6 cut(s) 71, 126, 332, 1282, 1685, 2115
BseJI GATNNNNATC 1 cut(s) 1716
BseLI CCNNNNNNNGG 6 cut(s) 151, 355, 387, 637, 900, 1331
BseMI GCAATG 3 cut(s) 96, 122, 1059
BseMII CTCAG 1 cut(s) 2112
BseNI ACTGG 5 cut(s) 392, 556, 703, 761, 1233
BseRI GAGGAG 2 cut(s) 1661, 2077
BseSI GKGCMC 2 cut(s) 1964, 2055
BseXI GCAGC 7 cut(s) 346, 473, 532, 698, 1294, 1735, 1850
BseYI CCCAGC 1 cut(s) 444
BsgI GTGCAG 1 cut(s) 1301
Bsh1236I CGCG 1 cut(s) 711
BshFI GGCC 8 cut(s) 498, 752, 1091, 1137, 1203, 1820, 1962, 2132
BshNI GGYRCC 1 cut(s) 1222
BsiHKAI GWGCWC 4 cut(s) 846, 1406, 1601, 2055
BsiHKCI CYCGRG 1 cut(s) 615
BsiSI CCGG 6 cut(s) 283, 297, 825, 1430, 1708, 1943
BslFI GGGAC 5 cut(s) 698, 850, 889, 1322, 2096
BslI CCNNNNNNNGG 6 cut(s) 151, 355, 387, 637, 900, 1331
BsmAI GTCTC 1 cut(s) 280
BsmFI GGGAC 5 cut(s) 698, 850, 889, 1322, 2096
BsmI GAATGC 1 cut(s) 2161
BsnI GGCC 8 cut(s) 498, 752, 1091, 1137, 1203, 1820, 1962, 2132
BsoBI CYCGRG 1 cut(s) 615
Bsp120I GGGCCC 1 cut(s) 1960
Bsp1286I GDGCHC 5 cut(s) 846, 1406, 1601, 1964, 2055
Bsp13I TCCGGA 1 cut(s) 282
Bsp1407I TGTACA 1 cut(s) 1695
Bsp1720I GCTNAGC 1 cut(s) 1439
BspACI CCGC 5 cut(s) 152, 260, 435, 1420, 1835
BspANI GGCC 8 cut(s) 498, 752, 1091, 1137, 1203, 1820, 1962, 2132
BspCNI CTCAG 1 cut(s) 2113
BspEI TCCGGA 1 cut(s) 282
BspFNI CGCG 1 cut(s) 711
BspLI GGNNCC 4 cut(s) 892, 1224, 1854, 1962
BspMAI CTGCAG 1 cut(s) 1585
BspPI GGATC 5 cut(s) 701, 1348, 1376, 1719, 2186
BspQI GCTCTTC 1 cut(s) 1606
BspT107I GGYRCC 1 cut(s) 1222
BspTI CTTAAG 2 cut(s) 319, 1159
BsrDI GCAATG 3 cut(s) 96, 122, 1059
BsrGI TGTACA 1 cut(s) 1695
BsrI ACTGG 5 cut(s) 392, 556, 703, 761, 1233
BssECI CCNNGG 4 cut(s) 313, 381, 1619, 1777
BssNI GRCGYC 1 cut(s) 2185
Bst2UI CCWGG 4 cut(s) 315, 638, 1620, 1779
Bst4CI ACNGT 8 cut(s) 382, 469, 862, 1214, 1379, 1392, 1880, 2017
Bst6I CTCTTC 2 cut(s) 1606, 2028
BstACI GRCGYC 1 cut(s) 2185
BstAFI CTTAAG 2 cut(s) 319, 1159
BstAPI GCANNNNNTGC 1 cut(s) 2017
BstAUI TGTACA 1 cut(s) 1695
BstBAI YACGTR 2 cut(s) 202, 592
BstC8I GCNNGC 3 cut(s) 442, 684, 1581
BstDEI CTNAG 7 cut(s) 46, 571, 959, 1093, 1439, 1746, 2121
BstDSI CCRYGG 1 cut(s) 381
BstEII GGTNACC 1 cut(s) 769
BstF5I GGATG 6 cut(s) 71, 126, 332, 1282, 1685, 2115
BstFNI CGCG 1 cut(s) 711
BstHHI GCGC 1 cut(s) 2103
BstMAI GTCTC 1 cut(s) 280
BstMWI GCNNNNNNNGC 7 cut(s) 65, 351, 441, 446, 461, 708, 2017
BstNI CCWGG 4 cut(s) 315, 638, 1620, 1779
BstNSI RCATGY 4 cut(s) 660, 686, 1315, 2061
BstPI GGTNACC 1 cut(s) 769
BstSCI CCNGG 5 cut(s) 313, 636, 1618, 1707, 1777
BstSFI CTRYAG 3 cut(s) 737, 1581, 2179
BstSLI GKGCMC 2 cut(s) 1964, 2055
BstSNI TACGTA 1 cut(s) 592
BstUI CGCG 1 cut(s) 711
BstV1I GCAGC 7 cut(s) 346, 473, 532, 698, 1294, 1735, 1850
BstV2I GAAGAC 2 cut(s) 990, 1881
BstX2I RGATCY 2 cut(s) 1711, 2191
BstYI RGATCY 2 cut(s) 1711, 2191
BsuI GTATCC 1 cut(s) 293
BsuRI GGCC 8 cut(s) 498, 752, 1091, 1137, 1203, 1820, 1962, 2132
BtgI CCRYGG 1 cut(s) 381
BtrI CACGTC 1 cut(s) 137
BtsCI GGATG 6 cut(s) 71, 126, 332, 1282, 1685, 2115
BtsI GCAGTG 1 cut(s) 817
BtsIMutI CAGTG 9 cut(s) 34, 549, 696, 817, 1226, 1599, 1885, 1995, 2022
Cac8I GCNNGC 3 cut(s) 442, 684, 1581
CaiI CAGNNNCTG 1 cut(s) 467
CfoI GCGC 1 cut(s) 2103
Cfr13I GGNCC 4 cut(s) 1852, 1901, 1960, 1961
CseI GACGC 2 cut(s) 700, 2174
Csp6I GTAC 9 cut(s) 85, 596, 634, 805, 1393, 1696, 1754, 2146, 2176
CspCI CAANNNNNGTGG 2 cut(s) 363, 398
CviQI GTAC 9 cut(s) 85, 596, 634, 805, 1393, 1696, 1754, 2146, 2176
DdeI CTNAG 7 cut(s) 46, 571, 959, 1093, 1439, 1746, 2121
DraI TTTAAA 1 cut(s) 1350
DraIII CACNNNGTG 1 cut(s) 555
DrdI GACNNNNNNGTC 1 cut(s) 854
DseDI GACNNNNNNGTC 1 cut(s) 854
EaeI YGGCCR 4 cut(s) 750, 1135, 1201, 1818
Eam1104I CTCTTC 2 cut(s) 1606, 2028
EarI CTCTTC 2 cut(s) 1606, 2028
Ecl136II GAGCTC 2 cut(s) 844, 1599
Eco105I TACGTA 1 cut(s) 592
Eco147I AGGCCT 1 cut(s) 1091
Eco24I GRGCYC 3 cut(s) 846, 1601, 1964
Eco47I GGWCC 2 cut(s) 1852, 1901
Eco53kI GAGCTC 2 cut(s) 844, 1599
Eco57I CTGAAG 4 cut(s) 166, 1106, 1317, 1935
Eco88I CYCGRG 1 cut(s) 615
Eco91I GGTNACC 1 cut(s) 769
EcoICRI GAGCTC 2 cut(s) 844, 1599
EcoO65I GGTNACC 1 cut(s) 769
EcoRI GAATTC 2 cut(s) 278, 954
EcoRII CCWGG 4 cut(s) 313, 636, 1618, 1777
EcoT22I ATGCAT 2 cut(s) 82, 1685
EcoT38I GRGCYC 3 cut(s) 846, 1601, 1964
FaqI GGGAC 5 cut(s) 698, 850, 889, 1322, 2096
FbaI TGATCA 4 cut(s) 24, 1687, 1717, 1882
FokI GGATG 6 cut(s) 58, 133, 319, 1289, 1692, 2122
FriOI GRGCYC 3 cut(s) 846, 1601, 1964
FspBI CTAG 5 cut(s) 1434, 1541, 1737, 1757, 2189
GlaI GCGC 1 cut(s) 2102
GsaI CCCAGC 1 cut(s) 448
GsuI CTGGAG 1 cut(s) 409
HaeIII GGCC 8 cut(s) 498, 752, 1091, 1137, 1203, 1820, 1962, 2132
HapII CCGG 6 cut(s) 283, 297, 825, 1430, 1708, 1943
HgaI GACGC 2 cut(s) 700, 2174
HhaI GCGC 1 cut(s) 2103
Hin1I GRCGYC 1 cut(s) 2185
Hin6I GCGC 1 cut(s) 2101
HinP1I GCGC 1 cut(s) 2101
HindIII AAGCTT 4 cut(s) 352, 1196, 1299, 1769
HinfI GANTC 8 cut(s) 89, 609, 1026, 1130, 1487, 1631, 1890, 2084
HpaII CCGG 6 cut(s) 283, 297, 825, 1430, 1708, 1943
HphI GGTGA 7 cut(s) 400, 947, 1663, 1682, 1883, 1930, 2056
Hpy166II GTNNAC 6 cut(s) 142, 385, 532, 1099, 1852, 2053
Hpy188I TCNGA 4 cut(s) 76, 517, 546, 801
Hpy8I GTNNAC 6 cut(s) 142, 385, 532, 1099, 1852, 2053
HpyAV CCTTC 8 cut(s) 154, 215, 467, 726, 736, 1016, 1081, 1875
HpyCH4III ACNGT 8 cut(s) 382, 469, 862, 1214, 1379, 1392, 1880, 2017
HpyCH4IV ACGT 4 cut(s) 136, 201, 329, 591
HpyF10VI GCNNNNNNNGC 7 cut(s) 65, 351, 441, 446, 461, 708, 2017
HpyF3I CTNAG 7 cut(s) 46, 571, 959, 1093, 1439, 1746, 2121
HpySE526I ACGT 4 cut(s) 136, 201, 329, 591
Hsp92I GRCGYC 1 cut(s) 2185
HspAI GCGC 1 cut(s) 2101
Kpn2I TCCGGA 1 cut(s) 282
Ksp22I TGATCA 4 cut(s) 24, 1687, 1717, 1882
LguI GCTCTTC 1 cut(s) 1606
LmnI GCTCC 2 cut(s) 841, 1334
Lsp1109I GCAGC 7 cut(s) 346, 473, 532, 698, 1294, 1735, 1850
LweI GCATC 3 cut(s) 67, 186, 1670
MaeI CTAG 5 cut(s) 1434, 1541, 1737, 1757, 2189
MaeII ACGT 4 cut(s) 136, 201, 329, 591
MaeIII GTNAC 8 cut(s) 406, 566, 769, 856, 1205, 1585, 1651, 1918
MfeI CAATTG 1 cut(s) 500
MflI RGATCY 2 cut(s) 1711, 2191
MhlI GDGCHC 5 cut(s) 846, 1406, 1601, 1964, 2055
MlsI TGGCCA 2 cut(s) 752, 1137
MluI ACGCGT 1 cut(s) 709
MluNI TGGCCA 2 cut(s) 752, 1137
MlyI GAGTC 4 cut(s) 603, 1139, 1481, 2078
MmeI TCCRAC 1 cut(s) 398
Mox20I TGGCCA 2 cut(s) 752, 1137
Mph1103I ATGCAT 2 cut(s) 82, 1685
MroI TCCGGA 1 cut(s) 282
MscI TGGCCA 2 cut(s) 752, 1137
MseI TTAA 9 cut(s) 213, 320, 905, 969, 1160, 1349, 1398, 1761, 1895
MslI CAYNNNNRTG 2 cut(s) 135, 2058
Msp20I TGGCCA 2 cut(s) 752, 1137
MspA1I CMGCKG 1 cut(s) 1841
MspCI CTTAAG 2 cut(s) 319, 1159
MspI CCGG 6 cut(s) 283, 297, 825, 1430, 1708, 1943
MspR9I CCNGG 5 cut(s) 315, 638, 1620, 1709, 1779
MunI CAATTG 1 cut(s) 500
Mva1269I GAATGC 1 cut(s) 2161
MvaI CCWGG 4 cut(s) 315, 638, 1620, 1779
MvnI CGCG 1 cut(s) 711
MwoI GCNNNNNNNGC 7 cut(s) 65, 351, 441, 446, 461, 708, 2017
NciI CCSGG 1 cut(s) 1709
NlaIV GGNNCC 4 cut(s) 892, 1224, 1854, 1962
NmeAIII GCCGAG 1 cut(s) 2108
NmuCI GTSAC 4 cut(s) 406, 856, 1651, 1918
NsiI ATGCAT 2 cut(s) 82, 1685
NspI RCATGY 4 cut(s) 660, 686, 1315, 2061
OliI CACNNNNGTG 1 cut(s) 2058
PaeI GCATGC 1 cut(s) 686
PaeR7I CTCGAG 1 cut(s) 615
PceI AGGCCT 1 cut(s) 1091
PciI ACATGT 2 cut(s) 1311, 2057
PciSI GCTCTTC 1 cut(s) 1606
PcsI WCGNNNNNNNCGW 2 cut(s) 852, 2135
PctI GAATGC 1 cut(s) 2161
PfeI GAWTC 4 cut(s) 89, 1026, 1631, 1890
PflMI CCANNNNNTGG 1 cut(s) 355
PfoI TCCNGGA 1 cut(s) 1707
PleI GAGTC 4 cut(s) 603, 1138, 1481, 2078
PpsI GAGTC 4 cut(s) 603, 1138, 1481, 2078
Ppu21I YACGTR 2 cut(s) 202, 592
PscI ACATGT 2 cut(s) 1311, 2057
PshBI ATTAAT 1 cut(s) 969
PsiI TTATAA 1 cut(s) 1553
Psp124BI GAGCTC 2 cut(s) 846, 1601
Psp6I CCWGG 4 cut(s) 313, 636, 1618, 1777
PspEI GGTNACC 1 cut(s) 769
PspFI CCCAGC 1 cut(s) 444
PspGI CCWGG 4 cut(s) 313, 636, 1618, 1777
PspN4I GGNNCC 4 cut(s) 892, 1224, 1854, 1962
PspOMI GGGCCC 1 cut(s) 1960
PspPI GGNCC 4 cut(s) 1852, 1901, 1960, 1961
PsrI GAACNNNNNNTAC 2 cut(s) 646, 678
PstI CTGCAG 1 cut(s) 1585
PstNI CAGNNNCTG 1 cut(s) 467
PsuI RGATCY 2 cut(s) 1711, 2191
PvuII CAGCTG 1 cut(s) 1841
RsaI GTAC 9 cut(s) 86, 597, 635, 806, 1394, 1697, 1755, 2147, 2177
RsaNI GTAC 9 cut(s) 85, 596, 634, 805, 1393, 1696, 1754, 2146, 2176
RseI CAYNNNNRTG 2 cut(s) 135, 2058
SacI GAGCTC 2 cut(s) 846, 1601
SapI GCTCTTC 1 cut(s) 1606
SaqAI TTAA 9 cut(s) 213, 320, 905, 969, 1160, 1349, 1398, 1761, 1895
Sau96I GGNCC 4 cut(s) 1852, 1901, 1960, 1961
ScaI AGTACT 2 cut(s) 1394, 1755
SchI GAGTC 4 cut(s) 603, 1139, 1481, 2078
ScrFI CCNGG 5 cut(s) 315, 638, 1620, 1709, 1779
SduI GDGCHC 5 cut(s) 846, 1406, 1601, 1964, 2055
SfaNI GCATC 3 cut(s) 67, 186, 1670
SfcI CTRYAG 3 cut(s) 737, 1581, 2179
Sfr274I CTCGAG 1 cut(s) 615
SinI GGWCC 2 cut(s) 1852, 1901
SlaI CTCGAG 1 cut(s) 615
SmiMI CAYNNNNRTG 2 cut(s) 135, 2058
SmlI CTYRAG 5 cut(s) 63, 319, 615, 1159, 2066
SmoI CTYRAG 5 cut(s) 63, 319, 615, 1159, 2066
SnaBI TACGTA 1 cut(s) 592
SpeI ACTAGT 1 cut(s) 1756
SphI GCATGC 1 cut(s) 686
SseBI AGGCCT 1 cut(s) 1091
SsiI CCGC 5 cut(s) 152, 260, 435, 1420, 1835
SspMI CTAG 5 cut(s) 1434, 1541, 1737, 1757, 2189
SstI GAGCTC 2 cut(s) 846, 1601
StuI AGGCCT 1 cut(s) 1091
StyD4I CCNGG 5 cut(s) 313, 636, 1618, 1707, 1777
TaaI ACNGT 8 cut(s) 382, 469, 862, 1214, 1379, 1392, 1880, 2017
TaiI ACGT 4 cut(s) 139, 204, 332, 594
TaqI TCGA 6 cut(s) 195, 616, 846, 1327, 1343, 1406
TatI WGTACW 6 cut(s) 595, 1392, 1695, 1753, 2145, 2175
TauI GCSGC 3 cut(s) 155, 1422, 1838
TfiI GAWTC 4 cut(s) 89, 1026, 1631, 1890
Tru1I TTAA 9 cut(s) 213, 320, 905, 969, 1160, 1349, 1398, 1761, 1895
Tru9I TTAA 9 cut(s) 213, 320, 905, 969, 1160, 1349, 1398, 1761, 1895
TscAI CASTG 9 cut(s) 34, 556, 703, 817, 1233, 1599, 1885, 2002, 2022
TseFI GTSAC 4 cut(s) 406, 856, 1651, 1918
TseI GCWGC 7 cut(s) 359, 461, 520, 686, 1282, 1723, 1838
Tsp45I GTSAC 4 cut(s) 406, 856, 1651, 1918
TspGWI ACGGA 3 cut(s) 618, 706, 854
TspRI CASTG 9 cut(s) 34, 556, 703, 817, 1233, 1599, 1885, 2002, 2022
Van91I CCANNNNNTGG 1 cut(s) 355
Vha464I CTTAAG 2 cut(s) 319, 1159
VneI GTGCAC 1 cut(s) 2051
VpaK11BI GGWCC 2 cut(s) 1852, 1901
VspI ATTAAT 1 cut(s) 969
XapI RAATTY 4 cut(s) 52, 278, 954, 1142
XbaI TCTAGA 2 cut(s) 1736, 2188
XceI RCATGY 4 cut(s) 660, 686, 1315, 2061
XhoI CTCGAG 1 cut(s) 615
XspI CTAG 5 cut(s) 1434, 1541, 1737, 1757, 2189
ZrmI AGTACT 2 cut(s) 1394, 1755
Zsp2I ATGCAT 2 cut(s) 82, 1685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.