Rmu_sc0009313.1_g000015

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009313.1
OG0000341
Physical Location & Seq
Forward (+)
52564 .. 55779
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009313.1_g000015.1.cds

Sequence Viewer

Length: 1776 bp
atggatttcaaaagaaaccatgtgatcagtgccatattcatcatcttggggactttggcttctcaagccacctcccgtgcattgtacgaatcttccatcgccgaaaaacatgagcaatggatggcaaagcacggccgcgtttaccacgacagtgcagagaaggaaaggcgttttgccatcttcaggaagaatgtcgaattcgtggagaagttcaacaaagaagggaacaagacttacaagttgagcatcaacaagttctctgatatgaccaatgaagaattcatgagacatcataccggatacaaaatgtcaaccagctcaaatacttcaacctcattcaaaagtaactattttcagtaccaaagcttggctgctactgatattccaactagcatggactggagggaacaacaagctgtcaccggcataaaggatcaaggtcgatgtggtgcttgctgggcatttacagtagtggcagctgtggaagggctaaccaaaatcaaagctggcaaattgatctcgctctctgagcagcaacttgtggactgcactcaacagaacaatgggtgcagcggtggtagcttagaaagcgcctacgagtacgttatacaaaacagaggaatcgctcgcgaagatacttaccaataccagagcactgacatgggaacatgcgacgctaacaaggaaagtgagcatgctgcacagatcactggttatgaacaagtcccttccagaaatgaaaacgatctactcaaggctgtctccatgcaaccagtctcggttagcattgctgcttatggaacagagtttcagcactacgtcagtggggtgttctctggcgattgtggaacacacctcgaccacgccgtcacagccattggctacgggacgactgaagatggaaccccctattggttactgaagaactcatggggcgagcagtggggtgaaagtggagaggggaagaaggtacgttgcccaaatggcatcgagaaccagcctatacaggcggagcccgtgcgccgatctccaaagaacgcaactgctttgtgtccgataataggtattgtgcactacaaaggggggactgcagatttgtactccgacttggtgaaagctcgagcgattgcttgctgtgatgggctctcccattgttgggaggggtcggtgggtagtacagctttccattacatgcttgcggtgatgggctgccatgcttatccgggtaggatccgacgcagaggacggttgaaagagcctgacagcgtgcctgcagggttgaaggagaatggcttttgtcgattggtggatgagacgaaggattgtttctgttcctggaacaaggtggcggcgatctggctttcaaaggcagtggtgggctggctccaacttgcaagagcgatgcagttcgcgttcagtcgggggcgtctcaaggtggatgaaagtcttgctgattctctgtgttggattagagttttgcgagatctgaattcggtcgcggatccgggtctgagacgcgatggcctgcatcttgtatgtgctgtggaggtggaggccgtgacagtgatcggagcaggagtgggtatgctcattctgggttgggtgccgagatctgtttcgaggcccaactcgattgggctgcccaaatctgctgtatggcccaggtcaagtttgcggcccaattctgggaagctttgggtgtctagatcattttgggtgctcaaaacagattgggtgtcacgattatggattgtggcccaagtttggaccaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04145 ko04210 ko04612 ko04621 ko04924 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map04621 map04924 map05205 map05323 map05418
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

591

Amino Acids

65.73

Weight (kDa)

8.69

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000341)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G27420 AT3G49340
fragaria_vesca FvH4_3g07960 FvH4_3g07970 FvH4_3g08030 FvH4_3g14350 FvH4_3g14380 FvH4_3g20730
malus_domestica MD04G1190600.v1.1 MD05G1287600.v1.1 MD05G1287900.v1.1 MD05G1288200.v1.1 MD05G1288400.v1.1 MD05G1302800.v1.1 MD10G1281600.v1.1 MD10G1281700.v1.1 MD10G1281800.v1.1 MD10G1282100.v1.1 MD10G1282200.v1.1 MD16G1031600.v1.1 MD16G1032300.v1.1
prunus_persica Prupe.4G059600_v2.0.a1
pyrus_communis pycom10g23500 pycom10g23510 pycom10g23520
rosa_chinensis RchiOBHm_Chr5g0010261 RchiOBHm_Chr5g0010361 RchiOBHm_Chr5g0010391 RchiOBHm_Chr5g0010401 RchiOBHm_Chr5g0023511 RchiOBHm_Chr5g0023601 RchiOBHm_Chr5g0023621 RchiOBHm_Chr5g0023691 RchiOBHm_Chr5g0033681 RchiOBHm_Chr5g0034901 RchiOBHm_Chr5g0034951 RchiOBHm_Chr5g0067391
rosa_laevigata RLG00000016148 RLG00000031732 RLG00000031742 RLG00000031743 RLG00000031748 RLG00000031751 RLG00000031752 RLG00000031754 RLG00000032725 RLG00000032730 RLG00000033542 RLG00000033584 RLG00000033587 RLG00000035932
rosa_multiflora Rmu_co7996926.1_g000001 Rmu_co8207458.1_g000001 Rmu_co8273509.1_g000001 Rmu_sc0000062.1_g000016 Rmu_sc0000062.1_g000017 Rmu_sc0001580.1_g000004 Rmu_sc0001580.1_g000023 Rmu_sc0007816.1_g000005 Rmu_sc0007816.1_g000009 Rmu_sc0008877.1_g000003 Rmu_sc0009313.1_g000011 Rmu_sc0009313.1_g000015 Rmu_sc0009313.1_g000021
rosa_roxburghii Rroxscaffold_1G00012970 Rroxscaffold_1G00045430 Rroxscaffold_1G00055550 Rroxscaffold_1G00065850 Rroxscaffold_1G00065880 Rroxscaffold_1G00065890 Rroxscaffold_1G00065900 Rroxscaffold_1G00065990
rosa_rugosa Rorug04G0450100 Rorug04G0450100 Rorug04G0450200 Rorug04G0451200 Rorug05G0145700 Rorug05G0149000 Rorug05G0385000
rosa_samantha Rh5AG080800 Rh5AG081500 Rh5AG081700 Rh5AG081900 Rh5AG167500 Rh5AG168500 Rh5AG232900 Rh5AG241400 Rh5AG242000 Rh5AG444500 Rh5BG075300 Rh5BG076500 Rh5BG076600 Rh5BG077000 Rh5BG165800 Rh5BG237800 Rh5BG241500 Rh5BG241600 Rh5BG461200 Rh5BG461300
rosa_wichuraiana Rw0G000780 Rw0G021930 Rw5G007480 Rw5G007560 Rw5G007570 Rw5G015200 Rw5G015260 Rw5G022090 Rw5G022100 Rw5G041490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 866
AccB1I GGYRCC 1 cut(s) 1603
AccB7I CCANNNNNTGG 1 cut(s) 367
AccII CGCG 5 cut(s) 138, 630, 1412, 1499, 1518
AciI CCGC 7 cut(s) 136, 573, 1010, 1199, 1349, 1499, 1675
AclWI GGATC 5 cut(s) 441, 1225, 1238, 1496, 1509
AcoI YGGCCR 1 cut(s) 133
AcsI RAATTY 3 cut(s) 197, 278, 1489
AcuI CTGAAG 3 cut(s) 166, 915, 941
AcyI GRCGYC 1 cut(s) 1426
AfaI GTAC 6 cut(s) 86, 359, 602, 972, 1100, 1177
AfiI CCNNNNNNNGG 9 cut(s) 183, 367, 912, 1061, 1155, 1156, 1685, 1686, 1764
AgsI TTSAA 7 cut(s) 10, 214, 330, 340, 1252, 1282, 1365
AjnI CCWGG 2 cut(s) 1334, 1661
AjuI GAANNNNNNNTTGG 4 cut(s) 263, 295, 895, 927
AleI CACNNNNGTG 1 cut(s) 150
AluBI AGCT 9 cut(s) 318, 366, 416, 479, 506, 582, 1118, 1181, 1693
AluI AGCT 9 cut(s) 318, 366, 416, 479, 506, 582, 1118, 1181, 1693
Alw21I GWGCWC 3 cut(s) 656, 1074, 1722
Alw26I GTCTC 6 cut(s) 280, 766, 781, 1307, 1433, 1507
Alw44I GTGCAC 1 cut(s) 1070
AlwI GGATC 5 cut(s) 441, 1225, 1238, 1496, 1509
Ama87I CYCGRG 1 cut(s) 1119
AoxI GGCC 7 cut(s) 133, 1522, 1554, 1622, 1658, 1676, 1755
ApaLI GTGCAC 1 cut(s) 1070
ApeKI GCWGC 8 cut(s) 371, 476, 532, 570, 698, 791, 1209, 1639
ApoI RAATTY 3 cut(s) 197, 278, 1489
ArsI GACNNNNNNTTYG 2 cut(s) 1078, 1110
AspLEI GCGC 2 cut(s) 593, 1023
AspS9I GGNCC 5 cut(s) 1623, 1659, 1677, 1756, 1767
AsuC2I CCSGG 2 cut(s) 1224, 1506
AsuHPI GGTGA 4 cut(s) 412, 959, 1123, 1213
AvaI CYCGRG 1 cut(s) 1119
AvaII GGWCC 1 cut(s) 1767
BaeGI GKGCMC 1 cut(s) 1074
BamHI GGATCC 2 cut(s) 1230, 1501
BanI GGYRCC 1 cut(s) 1603
BanII GRGCYC 2 cut(s) 1017, 1146
Bbv12I GWGCWC 3 cut(s) 656, 1074, 1722
BbvI GCAGC 8 cut(s) 358, 488, 544, 582, 685, 778, 1196, 1626
BccI CCATC 7 cut(s) 104, 115, 185, 893, 1133, 1198, 1514
BceAI ACGGC 3 cut(s) 148, 851, 1541
BcgI CGANNNNNNTGC 2 cut(s) 1621, 1655
BciT130I CCWGG 2 cut(s) 1336, 1663
BciVI GTATCC 1 cut(s) 293
BclI TGATCA 1 cut(s) 24
BcnI CCSGG 2 cut(s) 1224, 1506
BcoDI GTCTC 6 cut(s) 280, 766, 781, 1307, 1433, 1507
BfaI CTAG 2 cut(s) 390, 1704
BfmI CTRYAG 2 cut(s) 1089, 1272
BfoI RGCGCY 1 cut(s) 594
BfuI GTATCC 1 cut(s) 293
BglI GCCNNNNNGGC 1 cut(s) 984
BglII AGATCT 2 cut(s) 1483, 1610
Bme1390I CCNGG 4 cut(s) 1224, 1336, 1506, 1663
Bme18I GGWCC 1 cut(s) 1767
BmeT110I CYCGRG 1 cut(s) 1119
BmgT120I GGNCC 5 cut(s) 1623, 1659, 1677, 1756, 1767
BmiI GGNNCC 6 cut(s) 904, 1014, 1232, 1385, 1503, 1605
BmrFI CCNGG 4 cut(s) 1224, 1336, 1506, 1663
BmsI GCATC 4 cut(s) 255, 996, 1392, 1537
BpmI CTGGAG 1 cut(s) 421
BpuEI CTTGAG 3 cut(s) 48, 737, 1415
BpuMI CCSGG 2 cut(s) 1224, 1506
BsaHI GRCGYC 1 cut(s) 1426
BsaJI CCNNGG 1 cut(s) 1661
BsaWI WCCGGW 1 cut(s) 296
BsaXI ACNNNNNCTCC 2 cut(s) 1563, 1593
Bsc4I CCNNNNNNNGG 9 cut(s) 183, 367, 912, 1061, 1155, 1156, 1685, 1686, 1764
Bse118I RCCGGY 1 cut(s) 422
Bse1I ACTGG 3 cut(s) 404, 715, 773
Bse3DI GCAATG 2 cut(s) 122, 786
BseBI CCWGG 2 cut(s) 1336, 1663
BseDI CCNNGG 1 cut(s) 1661
BseGI GGATG 3 cut(s) 126, 1315, 1444
BseLI CCNNNNNNNGG 9 cut(s) 183, 367, 912, 1061, 1155, 1156, 1685, 1686, 1764
BseMI GCAATG 2 cut(s) 122, 786
BseMII CTCAG 2 cut(s) 519, 1502
BseNI ACTGG 3 cut(s) 404, 715, 773
BseSI GKGCMC 1 cut(s) 1074
BseX3I CGGCCG 1 cut(s) 133
BseXI GCAGC 8 cut(s) 358, 488, 544, 582, 685, 778, 1196, 1626
BseYI CCCAGC 1 cut(s) 456
BsgI GTGCAG 4 cut(s) 174, 532, 589, 684
Bsh1236I CGCG 5 cut(s) 138, 630, 1412, 1499, 1518
Bsh1285I CGRYCG 2 cut(s) 136, 1497
BshFI GGCC 7 cut(s) 135, 1524, 1556, 1624, 1660, 1678, 1757
BshNI GGYRCC 1 cut(s) 1603
BsiEI CGRYCG 2 cut(s) 136, 1497
BsiHKAI GWGCWC 3 cut(s) 656, 1074, 1722
BsiHKCI CYCGRG 1 cut(s) 1119
BsiSI CCGG 4 cut(s) 297, 423, 1223, 1505
BslFI GGGAC 4 cut(s) 64, 710, 901, 1099
BslI CCNNNNNNNGG 9 cut(s) 183, 367, 912, 1061, 1155, 1156, 1685, 1686, 1764
BsmAI GTCTC 6 cut(s) 280, 766, 781, 1307, 1433, 1507
BsmBI CGTCTC 3 cut(s) 1307, 1433, 1507
BsmFI GGGAC 4 cut(s) 64, 710, 901, 1099
BsnI GGCC 7 cut(s) 135, 1524, 1556, 1624, 1660, 1678, 1757
BsoBI CYCGRG 1 cut(s) 1119
Bsp1286I GDGCHC 5 cut(s) 656, 1017, 1074, 1146, 1722
Bsp68I TCGCGA 1 cut(s) 630
BspACI CCGC 7 cut(s) 136, 573, 1010, 1199, 1349, 1499, 1675
BspANI GGCC 7 cut(s) 135, 1524, 1556, 1624, 1660, 1678, 1757
BspCNI CTCAG 2 cut(s) 520, 1503
BspFNI CGCG 5 cut(s) 138, 630, 1412, 1499, 1518
BspHI TCATGA 1 cut(s) 282
BspLI GGNNCC 6 cut(s) 904, 1014, 1232, 1385, 1503, 1605
BspMAI CTGCAG 2 cut(s) 1093, 1276
BspPI GGATC 5 cut(s) 441, 1225, 1238, 1496, 1509
BspT107I GGYRCC 1 cut(s) 1603
BsrDI GCAATG 2 cut(s) 122, 786
BsrFI RCCGGY 1 cut(s) 422
BsrI ACTGG 3 cut(s) 404, 715, 773
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 1 cut(s) 1661
BssNI GRCGYC 1 cut(s) 1426
Bst2UI CCWGG 2 cut(s) 1336, 1663
Bst4CI ACNGT 4 cut(s) 152, 469, 1248, 1564
BstACI GRCGYC 1 cut(s) 1426
BstDEI CTNAG 3 cut(s) 528, 583, 1511
BstF5I GGATG 3 cut(s) 126, 1315, 1444
BstFNI CGCG 5 cut(s) 138, 630, 1412, 1499, 1518
BstH2I RGCGCY 1 cut(s) 594
BstHHI GCGC 2 cut(s) 593, 1023
BstMAI GTCTC 6 cut(s) 280, 766, 781, 1307, 1433, 1507
BstMCI CGRYCG 2 cut(s) 136, 1497
BstMWI GCNNNNNNNGC 7 cut(s) 65, 458, 529, 579, 588, 872, 984
BstNI CCWGG 2 cut(s) 1336, 1663
BstNSI RCATGY 3 cut(s) 672, 698, 1195
BstSCI CCNGG 4 cut(s) 1222, 1334, 1504, 1661
BstSFI CTRYAG 2 cut(s) 1089, 1272
BstSLI GKGCMC 1 cut(s) 1074
BstUI CGCG 5 cut(s) 138, 630, 1412, 1499, 1518
BstV1I GCAGC 8 cut(s) 358, 488, 544, 582, 685, 778, 1196, 1626
BstX2I RGATCY 4 cut(s) 1230, 1483, 1501, 1610
BstYI RGATCY 4 cut(s) 1230, 1483, 1501, 1610
BstZI CGGCCG 1 cut(s) 133
BsuI GTATCC 1 cut(s) 293
BsuRI GGCC 7 cut(s) 135, 1524, 1556, 1624, 1660, 1678, 1757
BtgZI GCGATG 3 cut(s) 82, 1415, 1533
BtsCI GGATG 3 cut(s) 126, 1315, 1444
BtsI GCAGTG 2 cut(s) 947, 1377
BtsIMutI CAGTG 8 cut(s) 34, 157, 654, 708, 829, 947, 1377, 1569
BtuMI TCGCGA 1 cut(s) 630
CciI TCATGA 1 cut(s) 282
CfoI GCGC 2 cut(s) 593, 1023
Cfr10I RCCGGY 1 cut(s) 422
Cfr13I GGNCC 5 cut(s) 1623, 1659, 1677, 1756, 1767
CseI GACGC 4 cut(s) 683, 1245, 1415, 1524
Csp6I GTAC 6 cut(s) 85, 358, 601, 971, 1099, 1176
CspCI CAANNNNNGTGG 2 cut(s) 1353, 1388
CviQI GTAC 6 cut(s) 85, 358, 601, 971, 1099, 1176
DdeI CTNAG 3 cut(s) 528, 583, 1511
DrdI GACNNNNNNGTC 1 cut(s) 866
DseDI GACNNNNNNGTC 1 cut(s) 866
EaeI YGGCCR 1 cut(s) 133
EagI CGGCCG 1 cut(s) 133
EciI GGCGGA 1 cut(s) 1025
EclXI CGGCCG 1 cut(s) 133
Eco24I GRGCYC 2 cut(s) 1017, 1146
Eco47I GGWCC 1 cut(s) 1767
Eco52I CGGCCG 1 cut(s) 133
Eco57I CTGAAG 3 cut(s) 166, 915, 941
Eco88I CYCGRG 1 cut(s) 1119
EcoRI GAATTC 3 cut(s) 197, 278, 1489
EcoRII CCWGG 2 cut(s) 1334, 1661
EcoT38I GRGCYC 2 cut(s) 1017, 1146
Esp3I CGTCTC 3 cut(s) 1307, 1433, 1507
FaqI GGGAC 4 cut(s) 64, 710, 901, 1099
FbaI TGATCA 1 cut(s) 24
FokI GGATG 3 cut(s) 133, 1322, 1451
FriOI GRGCYC 2 cut(s) 1017, 1146
FspBI CTAG 2 cut(s) 390, 1704
GlaI GCGC 2 cut(s) 592, 1022
GsaI CCCAGC 1 cut(s) 460
GsuI CTGGAG 1 cut(s) 421
HaeII RGCGCY 1 cut(s) 594
HaeIII GGCC 7 cut(s) 135, 1524, 1556, 1624, 1660, 1678, 1757
HapII CCGG 4 cut(s) 297, 423, 1223, 1505
HgaI GACGC 4 cut(s) 683, 1245, 1415, 1524
HhaI GCGC 2 cut(s) 593, 1023
Hin1I GRCGYC 1 cut(s) 1426
Hin6I GCGC 2 cut(s) 591, 1021
HinP1I GCGC 2 cut(s) 591, 1021
HincII GTYRAC 1 cut(s) 312
HindII GTYRAC 1 cut(s) 312
HindIII AAGCTT 2 cut(s) 364, 1691
HinfI GANTC 3 cut(s) 89, 621, 1454
HpaII CCGG 4 cut(s) 297, 423, 1223, 1505
HphI GGTGA 4 cut(s) 412, 959, 1123, 1213
Hpy166II GTNNAC 4 cut(s) 142, 312, 544, 1072
Hpy188I TCNGA 8 cut(s) 262, 529, 1056, 1105, 1235, 1488, 1512, 1571
Hpy188III TCNNGA 7 cut(s) 184, 283, 629, 732, 991, 1704, 1740
Hpy8I GTNNAC 4 cut(s) 142, 312, 544, 1072
Hpy99I CGWCG 2 cut(s) 677, 1239
HpyAV CCTTC 7 cut(s) 154, 215, 479, 738, 961, 1276, 1312
HpyCH4III ACNGT 4 cut(s) 152, 469, 1248, 1564
HpyCH4IV ACGT 3 cut(s) 603, 819, 973
HpyF10VI GCNNNNNNNGC 7 cut(s) 65, 458, 529, 579, 588, 872, 984
HpyF3I CTNAG 3 cut(s) 528, 583, 1511
HpySE526I ACGT 3 cut(s) 603, 819, 973
Hsp92I GRCGYC 1 cut(s) 1426
HspAI GCGC 2 cut(s) 591, 1021
Ksp22I TGATCA 1 cut(s) 24
LmnI GCTCC 3 cut(s) 1012, 1389, 1571
Lsp1109I GCAGC 8 cut(s) 358, 488, 544, 582, 685, 778, 1196, 1626
LweI GCATC 4 cut(s) 255, 996, 1392, 1537
MaeI CTAG 2 cut(s) 390, 1704
MaeII ACGT 3 cut(s) 603, 819, 973
MaeIII GTNAC 6 cut(s) 344, 418, 868, 915, 1558, 1737
MboII GAAGA 8 cut(s) 84, 172, 199, 287, 644, 908, 934, 976
MflI RGATCY 4 cut(s) 1230, 1483, 1501, 1610
MhlI GDGCHC 5 cut(s) 656, 1017, 1074, 1146, 1722
MluCI AATT 5 cut(s) 197, 278, 512, 1489, 1681
MmeI TCCRAC 5 cut(s) 410, 1128, 1258, 1411, 1445
MslI CAYNNNNRTG 3 cut(s) 150, 659, 1744
MspA1I CMGCKG 2 cut(s) 479, 573
MspI CCGG 4 cut(s) 297, 423, 1223, 1505
MspR9I CCNGG 4 cut(s) 1224, 1336, 1506, 1663
MvaI CCWGG 2 cut(s) 1336, 1663
MvnI CGCG 5 cut(s) 138, 630, 1412, 1499, 1518
MwoI GCNNNNNNNGC 7 cut(s) 65, 458, 529, 579, 588, 872, 984
NciI CCSGG 2 cut(s) 1224, 1506
NlaIV GGNNCC 6 cut(s) 904, 1014, 1232, 1385, 1503, 1605
NmeAIII GCCGAG 1 cut(s) 1632
NmuCI GTSAC 4 cut(s) 418, 868, 1558, 1737
NruI TCGCGA 1 cut(s) 630
NspI RCATGY 3 cut(s) 672, 698, 1195
OliI CACNNNNGTG 1 cut(s) 150
PaeI GCATGC 1 cut(s) 698
PaeR7I CTCGAG 1 cut(s) 1119
PagI TCATGA 1 cut(s) 282
PcsI WCGNNNNNNNCGW 1 cut(s) 864
PfeI GAWTC 3 cut(s) 89, 621, 1454
PflMI CCANNNNNTGG 1 cut(s) 367
PfoI TCCNGGA 1 cut(s) 1334
Psp6I CCWGG 2 cut(s) 1334, 1661
PspFI CCCAGC 1 cut(s) 456
PspGI CCWGG 2 cut(s) 1334, 1661
PspN4I GGNNCC 6 cut(s) 904, 1014, 1232, 1385, 1503, 1605
PspPI GGNCC 5 cut(s) 1623, 1659, 1677, 1756, 1767
PspXI VCTCGAGB 1 cut(s) 1119
PsrI GAACNNNNNNTAC 2 cut(s) 218, 250
PstI CTGCAG 2 cut(s) 1093, 1276
PsuI RGATCY 4 cut(s) 1230, 1483, 1501, 1610
PvuII CAGCTG 1 cut(s) 479
RruI TCGCGA 1 cut(s) 630
RsaI GTAC 6 cut(s) 86, 359, 602, 972, 1100, 1177
RsaNI GTAC 6 cut(s) 85, 358, 601, 971, 1099, 1176
RseI CAYNNNNRTG 3 cut(s) 150, 659, 1744
Sau96I GGNCC 5 cut(s) 1623, 1659, 1677, 1756, 1767
SbfI CCTGCAGG 1 cut(s) 1276
ScrFI CCNGG 4 cut(s) 1224, 1336, 1506, 1663
SdaI CCTGCAGG 1 cut(s) 1276
SduI GDGCHC 5 cut(s) 656, 1017, 1074, 1146, 1722
SfaNI GCATC 4 cut(s) 255, 996, 1392, 1537
SfcI CTRYAG 2 cut(s) 1089, 1272
Sfr274I CTCGAG 1 cut(s) 1119
SinI GGWCC 1 cut(s) 1767
SlaI CTCGAG 1 cut(s) 1119
SmiMI CAYNNNNRTG 3 cut(s) 150, 659, 1744
SmlI CTYRAG 4 cut(s) 63, 752, 1119, 1430
SmoI CTYRAG 4 cut(s) 63, 752, 1119, 1430
SphI GCATGC 1 cut(s) 698
Sse8387I CCTGCAGG 1 cut(s) 1276
Sse9I AATT 5 cut(s) 197, 278, 512, 1489, 1681
SsiI CCGC 7 cut(s) 136, 573, 1010, 1199, 1349, 1499, 1675
SspMI CTAG 2 cut(s) 390, 1704
StyD4I CCNGG 4 cut(s) 1222, 1334, 1504, 1661
TaaI ACNGT 4 cut(s) 152, 469, 1248, 1564
TaiI ACGT 3 cut(s) 606, 822, 976
TaqI TCGA 8 cut(s) 195, 442, 858, 990, 1120, 1300, 1619, 1631
TaqII GACCGA 1 cut(s) 1483
TasI AATT 5 cut(s) 197, 278, 512, 1489, 1681
TatI WGTACW 2 cut(s) 1098, 1175
TauI GCSGC 3 cut(s) 138, 1352, 1678
TfiI GAWTC 3 cut(s) 89, 621, 1454
TscAI CASTG 8 cut(s) 34, 157, 661, 715, 829, 947, 1377, 1569
TseFI GTSAC 4 cut(s) 418, 868, 1558, 1737
TseI GCWGC 8 cut(s) 371, 476, 532, 570, 698, 791, 1209, 1639
Tsp45I GTSAC 4 cut(s) 418, 868, 1558, 1737
TspDTI ATGAA 6 cut(s) 28, 271, 288, 732, 753, 1455
TspRI CASTG 8 cut(s) 34, 157, 661, 715, 829, 947, 1377, 1569
Van91I CCANNNNNTGG 1 cut(s) 367
VneI GTGCAC 1 cut(s) 1070
VpaK11BI GGWCC 1 cut(s) 1767
XapI RAATTY 3 cut(s) 197, 278, 1489
XbaI TCTAGA 1 cut(s) 1703
XceI RCATGY 3 cut(s) 672, 698, 1195
XhoI CTCGAG 1 cut(s) 1119
XspI CTAG 2 cut(s) 390, 1704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.