AT3G12203

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000102
Physical Location & Seq
Reverse (-)
3891160 .. 3894631
3472 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G12203.3

Sequence Viewer

Length: 1314 bp
ATGGGGAAAGAGTGCTACTACTTGTCATGGATACTCAAGTTTCATCTTCTACTTGTTTTGATTCAGCTTGTTGATTCAGGATCTACCATCAGATTTCTTCCTGGTTTCCAAGGCCCTCTTCCTTTCGAGCTCGAGACCGGGTACATTGGTGTGGGTGAGGCAGAGAAAGATCAAATGTTCTACTACTTCATCAAATCTGAGAGTAATCCAGAGAAAGACCCTCTTCTTCTCTGGTTAAGTGGAGGTCCTTTCTGTTCTTCGTTCACTGCTCTTATTTATGAGAATGGGCCAATTGCTTTCAAGGCTGAGGAATACAATGGAAGTATCCCCTCTTTGGTCTCTACCACATATGCATGGACTAAGGTGGCGAGCATTCTCTATTTGGATCAGCCTGTTGGGACTGGCTTCTCCTACTCCAGAAATCCACTTGCTGATATACCAAGTGACACAGGGGTAGCTAAGCCGGTCAACGAGTTTCTTCATAAGTGGCTAGACAAACATCCTGAGTTCTTATCCAATCCGCTCTATGTCGCCGGAAATTCTTATTCCGGTATTGTCATTCCGACCATCGTTCAAGAAATCTCAAATGGAAACCATTTAGACAGCAAACCTCAAATAAATCTTCAGGGCTTTGTACTCGGAAACCCGGCAACAGACACTGATATTGATCTTAACTCTCGCATTCCATTTGCTCATGGAAAGGCACTGATCTCTGATGAACACTATGAGTCTCTAAAGAGAAGTTGTCAAGGGAATTATATTAGCGTGAATCCTCGTAACACAAAATGCTTGAAACTCCTTGAAGACTTTAAAAAGTGTGTTTCTGGAATAAGTGAAGAATATATTCTAAAACCTGACTGCATGTGGCTTTATTCTTGTATGGCAAATCTGCATTCGCTATCTGAATATTGGGCAAATGAGAAAAGCGTGCGCAAAGCTCTTCTAGTGAACGAGGGTACCGTAAGAAAATGGATACGATGTAATACGGAAATCGCATACAATAAGGACATTAGGAGTAGTGTGCCATATCATAAGTATATTAGCATTGAAGGGTATCGATCTCTCGTCTTCAGTGGTGATCACGACATGTTAGTACCTTTCCTTGGAACTCAAGCATGGATAAGATCTCTCAACTATTCCATTGTTGACGATTGGAGACCATGGATGGTTCAGAATCAAGTTGCTGGATACACAAGGACTTATGCGAATAAGATGACATTTGCCACTGTCAAAGGAGGCGGGCACACGAGTGAGTATAAACCAGTGGAGACCTATATCATGATCAAGAGGTGGTTAAGTGGTCAACCTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016740 GO:0016746 GO:0016747 GO:0016752 GO:0019748
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

437

Amino Acids

49.5

Weight (kDa)

6.38

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 13 - 413 1.6e-133 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 932
Acc65I GGTACC 1 cut(s) 956
AccB1I GGYRCC 1 cut(s) 956
AccBSI CCGCTC 1 cut(s) 523
AciI CCGC 2 cut(s) 521, 1239
AclWI GGATC 2 cut(s) 88, 393
AcsI RAATTY 1 cut(s) 538
AcuI CTGAAG 2 cut(s) 608, 1054
AfaI GTAC 4 cut(s) 143, 636, 958, 1095
AfiI CCNNNNNNNGG 2 cut(s) 334, 1103
AflIII ACRYGT 1 cut(s) 1086
AgsI TTSAA 5 cut(s) 301, 575, 793, 803, 1049
AjnI CCWGG 1 cut(s) 100
AjuI GAANNNNNNNTTGG 2 cut(s) 102, 134
AleI CACNNNNGTG 1 cut(s) 1248
AluBI AGCT 4 cut(s) 67, 130, 458, 938
AluI AGCT 4 cut(s) 67, 130, 458, 938
Alw21I GWGCWC 1 cut(s) 132
Alw26I GTCTC 5 cut(s) 128, 343, 735, 1150, 1262
AlwI GGATC 2 cut(s) 88, 393
AlwNI CAGNNNCTG 1 cut(s) 659
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 2 cut(s) 112, 287
ApoI RAATTY 1 cut(s) 538
Asp700I GAANNNNTTC 1 cut(s) 843
Asp718I GGTACC 1 cut(s) 956
AspLEI GCGC 1 cut(s) 933
AspS9I GGNCC 3 cut(s) 113, 245, 287
AsuC2I CCSGG 2 cut(s) 139, 647
AsuHPI GGTGA 2 cut(s) 167, 1088
AvaI CYCGRG 1 cut(s) 131
AvaII GGWCC 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 1245
BaeI ACNNNNGTAYC 6 cut(s) 23, 56, 133, 166, 940, 973
BanI GGYRCC 1 cut(s) 956
BanII GRGCYC 1 cut(s) 132
BauI CACGAG 1 cut(s) 1246
BbsI GAAGAC 2 cut(s) 810, 1060
Bbv12I GWGCWC 1 cut(s) 132
BbvCI CCTCAGC 1 cut(s) 306
BccI CCATC 3 cut(s) 95, 575, 1159
BciT130I CCWGG 1 cut(s) 102
BciVI GTATCC 4 cut(s) 24, 335, 966, 1181
BclI TGATCA 2 cut(s) 1078, 1281
BcnI CCSGG 2 cut(s) 139, 647
BcoDI GTCTC 5 cut(s) 128, 343, 735, 1150, 1262
BfaI CTAG 2 cut(s) 491, 944
BfuI GTATCC 4 cut(s) 24, 335, 966, 1181
BglII AGATCT 1 cut(s) 1124
BlpI GCTNAGC 1 cut(s) 459
Bme1390I CCNGG 3 cut(s) 102, 139, 647
Bme18I GGWCC 1 cut(s) 245
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 3 cut(s) 113, 245, 287
BmiI GGNNCC 1 cut(s) 958
BmrFI CCNGG 3 cut(s) 102, 139, 647
BpiI GAAGAC 2 cut(s) 810, 1060
BpmI CTGGAG 1 cut(s) 400
Bpu10I CCTNAGC 1 cut(s) 306
Bpu1102I GCTNAGC 1 cut(s) 459
BpuEI CTTGAG 2 cut(s) 20, 1095
BpuMI CCSGG 2 cut(s) 139, 647
Bsa29I ATCGAT 1 cut(s) 1057
BsaBI GATNNNNATC 1 cut(s) 666
BsaI GGTCTC 4 cut(s) 128, 343, 1150, 1262
BsaJI CCNNGG 3 cut(s) 109, 1102, 1160
BsaWI WCCGGW 1 cut(s) 548
Bsc4I CCNNNNNNNGG 2 cut(s) 334, 1103
Bse118I RCCGGY 1 cut(s) 463
Bse1I ACTGG 2 cut(s) 406, 1262
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 1 cut(s) 102
BseCI ATCGAT 1 cut(s) 1057
BseDI CCNNGG 3 cut(s) 109, 1102, 1160
BseGI GGATG 2 cut(s) 499, 1170
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 2 cut(s) 334, 1103
BseMII CTCAG 3 cut(s) 189, 297, 495
BseNI ACTGG 2 cut(s) 406, 1262
BseSI GKGCMC 1 cut(s) 1245
BshFI GGCC 2 cut(s) 114, 289
BshNI GGYRCC 1 cut(s) 956
BshVI ATCGAT 1 cut(s) 1057
BsiHKAI GWGCWC 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 5 cut(s) 138, 464, 534, 549, 647
BslFI GGGAC 1 cut(s) 412
BslI CCNNNNNNNGG 2 cut(s) 334, 1103
BsmAI GTCTC 5 cut(s) 128, 343, 735, 1150, 1262
BsmFI GGGAC 1 cut(s) 412
BsmI GAATGC 3 cut(s) 372, 681, 892
BsnI GGCC 2 cut(s) 114, 289
Bso31I GGTCTC 4 cut(s) 128, 343, 1150, 1262
BsoBI CYCGRG 1 cut(s) 131
Bsp1286I GDGCHC 2 cut(s) 132, 1245
Bsp143I GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
Bsp1720I GCTNAGC 1 cut(s) 459
Bsp19I CCATGG 1 cut(s) 1160
BspACI CCGC 2 cut(s) 521, 1239
BspANI GGCC 2 cut(s) 114, 289
BspCNI CTCAG 3 cut(s) 190, 298, 496
BspDI ATCGAT 1 cut(s) 1057
BspHI TCATGA 1 cut(s) 1278
BspLI GGNNCC 1 cut(s) 958
BspPI GGATC 2 cut(s) 88, 393
BspQI GCTCTTC 1 cut(s) 945
BspT107I GGYRCC 1 cut(s) 956
BspTNI GGTCTC 4 cut(s) 128, 343, 1150, 1262
BsrBI CCGCTC 1 cut(s) 523
BsrFI RCCGGY 1 cut(s) 463
BsrI ACTGG 2 cut(s) 406, 1262
BssAI RCCGGY 1 cut(s) 463
BssECI CCNNGG 3 cut(s) 109, 1102, 1160
BssMI GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
BssSI CACGAG 1 cut(s) 1246
BssT1I CCWWGG 3 cut(s) 109, 1102, 1160
Bst2BI CACGAG 1 cut(s) 1246
Bst2UI CCWGG 1 cut(s) 102
Bst4CI ACNGT 2 cut(s) 961, 1228
Bst6I CTCTTC 3 cut(s) 123, 228, 945
BstC8I GCNNGC 3 cut(s) 370, 929, 1241
BstDEI CTNAG 5 cut(s) 198, 306, 360, 459, 504
BstDSI CCRYGG 1 cut(s) 1160
BstF5I GGATG 2 cut(s) 499, 1170
BstHHI GCGC 1 cut(s) 933
BstKTI GATC 9 cut(s) 83, 172, 388, 670, 711, 1061, 1081, 1127, 1284
BstMAI GTCTC 5 cut(s) 128, 343, 735, 1150, 1262
BstMBI GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
BstMWI GCNNNNNNNGC 1 cut(s) 302
BstNI CCWGG 1 cut(s) 102
BstNSI RCATGY 2 cut(s) 865, 1090
BstSCI CCNGG 3 cut(s) 100, 137, 645
BstSLI GKGCMC 1 cut(s) 1245
BstV2I GAAGAC 2 cut(s) 810, 1060
BstX2I RGATCY 2 cut(s) 80, 1124
BstYI RGATCY 2 cut(s) 80, 1124
Bsu15I ATCGAT 1 cut(s) 1057
BsuI GTATCC 4 cut(s) 24, 335, 966, 1181
BsuRI GGCC 2 cut(s) 114, 289
BsuTUI ATCGAT 1 cut(s) 1057
BtgI CCRYGG 1 cut(s) 1160
BtsCI GGATG 2 cut(s) 499, 1170
BtsI GCAGTG 1 cut(s) 264
BtsIMutI CAGTG 6 cut(s) 264, 657, 704, 1078, 1224, 1269
Cac8I GCNNGC 3 cut(s) 370, 929, 1241
CaiI CAGNNNCTG 1 cut(s) 659
CciI TCATGA 1 cut(s) 1278
CfoI GCGC 1 cut(s) 933
Cfr10I RCCGGY 1 cut(s) 463
Cfr13I GGNCC 3 cut(s) 113, 245, 287
ClaI ATCGAT 1 cut(s) 1057
Csp6I GTAC 4 cut(s) 142, 635, 957, 1094
CviAII CATG 8 cut(s) 27, 354, 695, 862, 1087, 1116, 1161, 1279
CviQI GTAC 4 cut(s) 142, 635, 957, 1094
DdeI CTNAG 5 cut(s) 198, 306, 360, 459, 504
DpnI GATC 9 cut(s) 82, 171, 387, 669, 710, 1060, 1080, 1126, 1283
DpnII GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
DraI TTTAAA 1 cut(s) 811
Eam1104I CTCTTC 3 cut(s) 123, 228, 945
EarI CTCTTC 3 cut(s) 123, 228, 945
Ecl136II GAGCTC 1 cut(s) 130
Eco130I CCWWGG 3 cut(s) 109, 1102, 1160
Eco24I GRGCYC 1 cut(s) 132
Eco31I GGTCTC 4 cut(s) 128, 343, 1150, 1262
Eco47I GGWCC 1 cut(s) 245
Eco53kI GAGCTC 1 cut(s) 130
Eco57I CTGAAG 2 cut(s) 608, 1054
Eco88I CYCGRG 1 cut(s) 131
EcoICRI GAGCTC 1 cut(s) 130
EcoO109I RGGNCCY 2 cut(s) 113, 245
EcoRII CCWGG 1 cut(s) 100
EcoT14I CCWWGG 3 cut(s) 109, 1102, 1160
EcoT22I ATGCAT 1 cut(s) 355
EcoT38I GRGCYC 1 cut(s) 132
ErhI CCWWGG 3 cut(s) 109, 1102, 1160
FaeI CATG 8 cut(s) 30, 357, 698, 865, 1090, 1119, 1164, 1282
FalI AAGNNNNNCTT 4 cut(s) 102, 134, 207, 239
FaqI GGGAC 1 cut(s) 412
FatI CATG 8 cut(s) 26, 353, 694, 861, 1086, 1115, 1160, 1278
FauI CCCGC 1 cut(s) 1232
FauNDI CATATG 1 cut(s) 349
FbaI TGATCA 2 cut(s) 1078, 1281
FokI GGATG 2 cut(s) 486, 1177
FriOI GRGCYC 1 cut(s) 132
FspBI CTAG 2 cut(s) 491, 944
FspI TGCGCA 1 cut(s) 932
GlaI GCGC 1 cut(s) 932
GsuI CTGGAG 1 cut(s) 400
HaeIII GGCC 2 cut(s) 114, 289
HapII CCGG 5 cut(s) 138, 464, 534, 549, 647
HhaI GCGC 1 cut(s) 933
Hin1II CATG 8 cut(s) 30, 357, 698, 865, 1090, 1119, 1164, 1282
Hin6I GCGC 1 cut(s) 931
HinP1I GCGC 1 cut(s) 931
HincII GTYRAC 3 cut(s) 469, 1147, 1304
HindII GTYRAC 3 cut(s) 469, 1147, 1304
HinfI GANTC 5 cut(s) 61, 74, 728, 769, 1174
HpaII CCGG 5 cut(s) 138, 464, 534, 549, 647
HphI GGTGA 2 cut(s) 167, 1088
Hpy166II GTNNAC 5 cut(s) 264, 469, 949, 1147, 1304
Hpy188I TCNGA 7 cut(s) 92, 199, 564, 641, 715, 904, 1173
Hpy8I GTNNAC 5 cut(s) 264, 469, 949, 1147, 1304
HpyAV CCTTC 1 cut(s) 1043
HpyCH4III ACNGT 2 cut(s) 961, 1228
HpyCH4V TGCA 3 cut(s) 353, 861, 892
HpyF10VI GCNNNNNNNGC 1 cut(s) 302
HpyF3I CTNAG 5 cut(s) 198, 306, 360, 459, 504
Hsp92II CATG 8 cut(s) 30, 357, 698, 865, 1090, 1119, 1164, 1282
HspAI GCGC 1 cut(s) 931
KpnI GGTACC 1 cut(s) 960
Ksp22I TGATCA 2 cut(s) 1078, 1281
Kzo9I GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
LguI GCTCTTC 1 cut(s) 945
MaeI CTAG 2 cut(s) 491, 944
MaeIII GTNAC 2 cut(s) 443, 776
MalI GATC 9 cut(s) 82, 171, 387, 669, 710, 1060, 1080, 1126, 1283
MbiI CCGCTC 1 cut(s) 523
MboI GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
MfeI CAATTG 1 cut(s) 291
MflI RGATCY 2 cut(s) 80, 1124
MhlI GDGCHC 2 cut(s) 132, 1245
MluCI AATT 3 cut(s) 291, 538, 754
MlyI GAGTC 1 cut(s) 737
MmeI TCCRAC 1 cut(s) 587
Mph1103I ATGCAT 1 cut(s) 355
MroXI GAANNNNTTC 1 cut(s) 843
MseI TTAA 4 cut(s) 236, 672, 810, 1295
MslI CAYNNNNRTG 3 cut(s) 149, 352, 1248
MspI CCGG 5 cut(s) 138, 464, 534, 549, 647
MspR9I CCNGG 3 cut(s) 102, 139, 647
MunI CAATTG 1 cut(s) 291
Mva1269I GAATGC 3 cut(s) 372, 681, 892
MvaI CCWGG 1 cut(s) 102
MwoI GCNNNNNNNGC 1 cut(s) 302
NciI CCSGG 2 cut(s) 139, 647
NcoI CCATGG 1 cut(s) 1160
NdeI CATATG 1 cut(s) 349
NdeII GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
NlaIII CATG 8 cut(s) 30, 357, 698, 865, 1090, 1119, 1164, 1282
NlaIV GGNNCC 1 cut(s) 958
NmuCI GTSAC 1 cut(s) 443
NsbI TGCGCA 1 cut(s) 932
NsiI ATGCAT 1 cut(s) 355
NspI RCATGY 2 cut(s) 865, 1090
OliI CACNNNNGTG 1 cut(s) 1248
PaeR7I CTCGAG 1 cut(s) 131
PagI TCATGA 1 cut(s) 1278
PciI ACATGT 1 cut(s) 1086
PciSI GCTCTTC 1 cut(s) 945
PcsI WCGNNNNNNNCGW 1 cut(s) 957
PctI GAATGC 3 cut(s) 372, 681, 892
PdmI GAANNNNTTC 1 cut(s) 843
PfeI GAWTC 4 cut(s) 61, 74, 769, 1174
PleI GAGTC 1 cut(s) 736
PpsI GAGTC 1 cut(s) 736
PpuMI RGGWCCY 1 cut(s) 245
PscI ACATGT 1 cut(s) 1086
Psp124BI GAGCTC 1 cut(s) 132
Psp5II RGGWCCY 1 cut(s) 245
Psp6I CCWGG 1 cut(s) 100
PspGI CCWGG 1 cut(s) 100
PspN4I GGNNCC 1 cut(s) 958
PspPI GGNCC 3 cut(s) 113, 245, 287
PspPPI RGGWCCY 1 cut(s) 245
PstNI CAGNNNCTG 1 cut(s) 659
PsuI RGATCY 2 cut(s) 80, 1124
RsaI GTAC 4 cut(s) 143, 636, 958, 1095
RsaNI GTAC 4 cut(s) 142, 635, 957, 1094
RseI CAYNNNNRTG 3 cut(s) 149, 352, 1248
SacI GAGCTC 1 cut(s) 132
SapI GCTCTTC 1 cut(s) 945
SaqAI TTAA 4 cut(s) 236, 672, 810, 1295
Sau3AI GATC 9 cut(s) 80, 169, 385, 667, 708, 1058, 1078, 1124, 1281
Sau96I GGNCC 3 cut(s) 113, 245, 287
SchI GAGTC 1 cut(s) 737
ScrFI CCNGG 3 cut(s) 102, 139, 647
SduI GDGCHC 2 cut(s) 132, 1245
Sfr274I CTCGAG 1 cut(s) 131
SinI GGWCC 1 cut(s) 245
SlaI CTCGAG 1 cut(s) 131
SmiMI CAYNNNNRTG 3 cut(s) 149, 352, 1248
SmlI CTYRAG 3 cut(s) 35, 131, 1110
SmoI CTYRAG 3 cut(s) 35, 131, 1110
Sse9I AATT 3 cut(s) 291, 538, 754
SsiI CCGC 2 cut(s) 521, 1239
SspI AATATT 1 cut(s) 908
SspMI CTAG 2 cut(s) 491, 944
SstI GAGCTC 1 cut(s) 132
StyD4I CCNGG 3 cut(s) 100, 137, 645
StyI CCWWGG 3 cut(s) 109, 1102, 1160
TaaI ACNGT 2 cut(s) 961, 1228
TaqI TCGA 3 cut(s) 126, 132, 1057
TasI AATT 3 cut(s) 291, 538, 754
TatI WGTACW 1 cut(s) 634
TfiI GAWTC 4 cut(s) 61, 74, 769, 1174
Tru1I TTAA 4 cut(s) 236, 672, 810, 1295
Tru9I TTAA 4 cut(s) 236, 672, 810, 1295
TscAI CASTG 6 cut(s) 271, 664, 711, 1078, 1231, 1269
TseFI GTSAC 1 cut(s) 443
Tsp45I GTSAC 1 cut(s) 443
TspDTI ATGAA 4 cut(s) 32, 178, 470, 732
TspGWI ACGGA 1 cut(s) 1001
TspRI CASTG 6 cut(s) 271, 664, 711, 1078, 1231, 1269
VpaK11BI GGWCC 1 cut(s) 245
XapI RAATTY 1 cut(s) 538
XceI RCATGY 2 cut(s) 865, 1090
XhoI CTCGAG 1 cut(s) 131
XmnI GAANNNNTTC 1 cut(s) 843
XspI CTAG 2 cut(s) 491, 944
Zsp2I ATGCAT 1 cut(s) 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.