Prupe.8G147600_v2.0.a1

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000102
Physical Location & Seq
Reverse (-)
16255868 .. 16257189
1322 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G147600.1

Sequence Viewer

Length: 663 bp
ATGACTCAATTGGAACGGATGAGAAAGTTGGATGACCTAATTGCCTCAACAACAAAAAAATTCGAGGACCTAATTACAACTCGAGCACTTGTTCTGGTCTTACTGAACTGTCACATTTTTGCATCCGCATCCATAATCAACACCCTACCGGGCTTTTCCGGCAACCTCCCCTTTAAACTTGAAACTGGTTGTTGTTCCCCACATGAGTTACTAATACGTATGAAATATGAGAGTGAAAATGATGGTTTTGATGACAAATTAAAGGTACGTGGGGTGGGCGATTTGGATGATGTGCAGCTGTTCTATTACTTCATTGAGTCGGAGAGGAGTCCCAAGGAAGACCCTCTACTGCTTTGGCTCACCGGAGGTCCCGGTTGCTCTGCTTTCTCCGGCCTTGTATACGAAATAGGTCCAATAATGTTCAACTACGCAAATTCTAGTGGGAACGAACCAACATTTGTGTTGAATCCATACTCATGGACAAAGGTAAACCTACTACTTAATCTGTACTTAATTCGTCAAGAACATTACCCAAATGCATTGGACAATGTTCAGGTTGCCAACATAATATTTTTGGATCAACCAGTTGGTAGTGGATTCTCCTATGCAAAAAGTTGGCAAGGATACGAGATCGGTGATATATCATCCGCAGCTCATAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

221

Amino Acids

24.65

Weight (kDa)

4.87

Isoelectric Point (pI)

38.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 399
AciI CCGC 2 cut(s) 126, 648
AclWI GGATC 1 cut(s) 585
AcsI RAATTY 2 cut(s) 59, 433
AfaI GTAC 2 cut(s) 267, 509
AgsI TTSAA 3 cut(s) 182, 424, 466
AluBI AGCT 3 cut(s) 298, 653, 660
AluI AGCT 3 cut(s) 298, 653, 660
Alw21I GWGCWC 1 cut(s) 88
AlwI GGATC 1 cut(s) 585
Ama87I CYCGRG 1 cut(s) 81
AoxI GGCC 1 cut(s) 391
ApeKI GCWGC 2 cut(s) 295, 650
ApoI RAATTY 2 cut(s) 59, 433
AspS9I GGNCC 3 cut(s) 67, 368, 410
AsuC2I CCSGG 2 cut(s) 150, 372
AsuHPI GGTGA 2 cut(s) 352, 647
AvaI CYCGRG 1 cut(s) 81
AvaII GGWCC 3 cut(s) 67, 368, 410
BarI GAAGNNNNNNTAC 2 cut(s) 330, 362
BbsI GAAGAC 1 cut(s) 345
Bbv12I GWGCWC 1 cut(s) 88
BbvI GCAGC 1 cut(s) 307
BccI CCATC 1 cut(s) 236
BciVI GTATCC 1 cut(s) 617
BcnI CCSGG 2 cut(s) 150, 372
BfaI CTAG 1 cut(s) 438
BfuI GTATCC 1 cut(s) 617
BisI GCNGC 2 cut(s) 296, 651
BlsI GCNGC 2 cut(s) 297, 652
Bme1390I CCNGG 2 cut(s) 150, 372
Bme18I GGWCC 3 cut(s) 67, 368, 410
BmeT110I CYCGRG 1 cut(s) 81
BmgT120I GGNCC 3 cut(s) 67, 368, 410
BmiI GGNNCC 1 cut(s) 370
BmrFI CCNGG 2 cut(s) 150, 372
BmsI GCATC 2 cut(s) 131, 137
BpiI GAAGAC 1 cut(s) 345
BpuMI CCSGG 2 cut(s) 150, 372
BsaAI YACGTR 2 cut(s) 218, 269
BsaJI CCNNGG 1 cut(s) 333
BsaWI WCCGGW 1 cut(s) 362
Bse1I ACTGG 2 cut(s) 190, 584
BseDI CCNNGG 1 cut(s) 333
BseGI GGATG 6 cut(s) 24, 37, 122, 128, 292, 644
BseNI ACTGG 2 cut(s) 190, 584
BseRI GAGGAG 1 cut(s) 340
BseXI GCAGC 1 cut(s) 307
BsgI GTGCAG 1 cut(s) 314
BshFI GGCC 1 cut(s) 393
BsiHKAI GWGCWC 1 cut(s) 88
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 5 cut(s) 149, 159, 363, 372, 390
BslFI GGGAC 2 cut(s) 315, 354
BsmFI GGGAC 2 cut(s) 315, 354
BsnI GGCC 1 cut(s) 393
BsoBI CYCGRG 1 cut(s) 81
Bsp1286I GDGCHC 1 cut(s) 88
Bsp143I GATC 2 cut(s) 577, 630
BspACI CCGC 2 cut(s) 126, 648
BspANI GGCC 1 cut(s) 393
BspLI GGNNCC 1 cut(s) 370
BspPI GGATC 1 cut(s) 585
BsrI ACTGG 2 cut(s) 190, 584
BssECI CCNNGG 1 cut(s) 333
BssMI GATC 2 cut(s) 577, 630
BssNAI GTATAC 1 cut(s) 400
BssT1I CCWWGG 1 cut(s) 333
Bst1107I GTATAC 1 cut(s) 400
Bst4CI ACNGT 1 cut(s) 110
BstBAI YACGTR 2 cut(s) 218, 269
BstF5I GGATG 6 cut(s) 24, 37, 122, 128, 292, 644
BstKTI GATC 2 cut(s) 580, 633
BstMBI GATC 2 cut(s) 577, 630
BstMWI GCNNNNNNNGC 1 cut(s) 159
BstSCI CCNGG 2 cut(s) 148, 370
BstSNI TACGTA 1 cut(s) 218
BstV1I GCAGC 1 cut(s) 307
BstV2I GAAGAC 1 cut(s) 345
BstXI CCANNNNNNTGG 1 cut(s) 477
BstZ17I GTATAC 1 cut(s) 400
BsuI GTATCC 1 cut(s) 617
BsuRI GGCC 1 cut(s) 393
BtsCI GGATG 6 cut(s) 24, 37, 122, 128, 292, 644
Cfr13I GGNCC 3 cut(s) 67, 368, 410
Csp6I GTAC 2 cut(s) 266, 508
CviAII CATG 2 cut(s) 203, 477
CviJI RGCY 6 cut(s) 153, 298, 358, 393, 653, 660
CviKI_1 RGCY 6 cut(s) 153, 298, 358, 393, 653, 660
CviQI GTAC 2 cut(s) 266, 508
DpnI GATC 2 cut(s) 579, 632
DpnII GATC 2 cut(s) 577, 630
DraI TTTAAA 1 cut(s) 175
Eco105I TACGTA 1 cut(s) 218
Eco130I CCWWGG 1 cut(s) 333
Eco47I GGWCC 3 cut(s) 67, 368, 410
Eco88I CYCGRG 1 cut(s) 81
EcoO109I RGGNCCY 2 cut(s) 67, 368
EcoT14I CCWWGG 1 cut(s) 333
EcoT22I ATGCAT 1 cut(s) 541
ErhI CCWWGG 1 cut(s) 333
FaeI CATG 2 cut(s) 206, 480
FaqI GGGAC 2 cut(s) 315, 354
FatI CATG 2 cut(s) 202, 476
FblI GTMKAC 1 cut(s) 399
Fnu4HI GCNGC 2 cut(s) 296, 651
FokI GGATG 6 cut(s) 31, 44, 109, 115, 299, 631
Fsp4HI GCNGC 2 cut(s) 296, 651
FspBI CTAG 1 cut(s) 438
GluI GCNGC 2 cut(s) 296, 651
HaeIII GGCC 1 cut(s) 393
HapII CCGG 5 cut(s) 149, 159, 363, 372, 390
Hin1II CATG 2 cut(s) 206, 480
HinfI GANTC 5 cut(s) 4, 317, 328, 466, 597
HpaII CCGG 5 cut(s) 149, 159, 363, 372, 390
HphI GGTGA 2 cut(s) 352, 647
Hpy166II GTNNAC 2 cut(s) 400, 490
Hpy188I TCNGA 1 cut(s) 322
Hpy188III TCNNGA 1 cut(s) 521
Hpy8I GTNNAC 2 cut(s) 400, 490
HpyCH4III ACNGT 1 cut(s) 110
HpyCH4IV ACGT 2 cut(s) 217, 268
HpyCH4V TGCA 4 cut(s) 122, 295, 539, 608
HpyF10VI GCNNNNNNNGC 1 cut(s) 159
HpySE526I ACGT 2 cut(s) 217, 268
Hsp92II CATG 2 cut(s) 206, 480
Kzo9I GATC 2 cut(s) 577, 630
LpnPI CCDG 9 cut(s) 80, 162, 171, 172, 376, 385, 403, 539, 597
Lsp1109I GCAGC 1 cut(s) 307
LweI GCATC 2 cut(s) 131, 137
MaeI CTAG 1 cut(s) 438
MaeII ACGT 2 cut(s) 217, 268
MaeIII GTNAC 2 cut(s) 110, 207
MalI GATC 2 cut(s) 579, 632
MboI GATC 2 cut(s) 577, 630
MboII GAAGA 1 cut(s) 350
MfeI CAATTG 1 cut(s) 8
MhlI GDGCHC 1 cut(s) 88
MluCI AATT 7 cut(s) 8, 39, 59, 72, 257, 433, 513
MlyI GAGTC 2 cut(s) 326, 337
MmeI TCCRAC 2 cut(s) 9, 300
MnlI CCTC 6 cut(s) 55, 58, 176, 318, 354, 359
Mph1103I ATGCAT 1 cut(s) 541
MseI TTAA 4 cut(s) 174, 260, 501, 512
MslI CAYNNNNRTG 1 cut(s) 475
MspA1I CMGCKG 1 cut(s) 298
MspI CCGG 5 cut(s) 149, 159, 363, 372, 390
MspR9I CCNGG 2 cut(s) 150, 372
MunI CAATTG 1 cut(s) 8
MwoI GCNNNNNNNGC 1 cut(s) 159
NciI CCSGG 2 cut(s) 150, 372
NdeII GATC 2 cut(s) 577, 630
NlaIII CATG 2 cut(s) 206, 480
NlaIV GGNNCC 1 cut(s) 370
NmuCI GTSAC 1 cut(s) 110
NsiI ATGCAT 1 cut(s) 541
PaeR7I CTCGAG 1 cut(s) 81
PfeI GAWTC 2 cut(s) 466, 597
PkrI GCNGC 2 cut(s) 297, 652
PleI GAGTC 2 cut(s) 325, 336
PpsI GAGTC 2 cut(s) 325, 336
Ppu21I YACGTR 2 cut(s) 218, 269
PpuMI RGGWCCY 2 cut(s) 67, 368
Psp5II RGGWCCY 2 cut(s) 67, 368
PspN4I GGNNCC 1 cut(s) 370
PspPI GGNCC 3 cut(s) 67, 368, 410
PspPPI RGGWCCY 2 cut(s) 67, 368
PspXI VCTCGAGB 1 cut(s) 81
PvuII CAGCTG 1 cut(s) 298
RsaI GTAC 2 cut(s) 267, 509
RsaNI GTAC 2 cut(s) 266, 508
RseI CAYNNNNRTG 1 cut(s) 475
SaqAI TTAA 4 cut(s) 174, 260, 501, 512
SatI GCNGC 2 cut(s) 296, 651
Sau3AI GATC 2 cut(s) 577, 630
Sau96I GGNCC 3 cut(s) 67, 368, 410
SchI GAGTC 2 cut(s) 326, 337
ScrFI CCNGG 2 cut(s) 150, 372
SduI GDGCHC 1 cut(s) 88
SfaNI GCATC 2 cut(s) 131, 137
Sfr274I CTCGAG 1 cut(s) 81
SinI GGWCC 3 cut(s) 67, 368, 410
SlaI CTCGAG 1 cut(s) 81
SmiMI CAYNNNNRTG 1 cut(s) 475
SmlI CTYRAG 1 cut(s) 81
SmoI CTYRAG 1 cut(s) 81
SnaBI TACGTA 1 cut(s) 218
Sse9I AATT 7 cut(s) 8, 39, 59, 72, 257, 433, 513
SsiI CCGC 2 cut(s) 126, 648
SspI AATATT 1 cut(s) 570
SspMI CTAG 1 cut(s) 438
StyD4I CCNGG 2 cut(s) 148, 370
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 1 cut(s) 110
TaiI ACGT 2 cut(s) 220, 271
TaqI TCGA 2 cut(s) 63, 82
TasI AATT 7 cut(s) 8, 39, 59, 72, 257, 433, 513
TatI WGTACW 1 cut(s) 507
TfiI GAWTC 2 cut(s) 466, 597
Tru1I TTAA 4 cut(s) 174, 260, 501, 512
Tru9I TTAA 4 cut(s) 174, 260, 501, 512
TseFI GTSAC 1 cut(s) 110
TseI GCWGC 2 cut(s) 295, 650
Tsp45I GTSAC 1 cut(s) 110
TspDTI ATGAA 2 cut(s) 236, 301
TspGWI ACGGA 1 cut(s) 31
VpaK11BI GGWCC 3 cut(s) 67, 368, 410
XapI RAATTY 2 cut(s) 59, 433
XhoI CTCGAG 1 cut(s) 81
XmiI GTMKAC 1 cut(s) 399
XspI CTAG 1 cut(s) 438
Zsp2I ATGCAT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.